Source_Database	MEGARes_Header	Source_Headers(space_separated)
ARG-ANNOT	Bla|OXA-223|JN248564|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-223:JN248564:1-825:825
CARD	Bla|OXA-223|JN248564|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|JN248564|0-825|ARO:3001669|OXA-223 [Acinetobacter baumannii]
Lahey	Bla|OXA-223|JN248564|1-825|825|betalactams|Class_D_betalactamases|OXA	AEL88491.1 JN248564.1:1-825
NCBI	Bla|OXA-223|JN248564|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|343129264|gb|JN248564.1|1-825
Resfinder	Bla|OXA-223|JN248564|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-223_1_JN248564
CARD	gi|698174209|gb|KM087859.1|betalactams|Class_C_betalactamases|MIR	@phgb|KM087859|0-1146|ARO:3002176|MIR-11 [Enterobacter cloacae]
Lahey	gi|698174209|gb|KM087859.1|betalactams|Class_C_betalactamases|MIR	AIT76112.1 KM087859.1:1-1146
NCBI	gi|698174209|gb|KM087859.1|betalactams|Class_C_betalactamases|MIR	gi|698174209|gb|KM087859.1|1-1146
ARG-ANNOT	1172|AF317511.1|AF317511|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-1:GU724868:1023-1823:801
CARD	1172|AF317511.1|AF317511|betalactams|Class_B_betalactamases|VIM	@phgb|AF317511|187-988|ARO:3002271|VIM-1 [Pseudomonas aeruginosa]
Lahey	1172|AF317511.1|AF317511|betalactams|Class_B_betalactamases|VIM	CAB46686.1 Y18050.2:3225-4025
NCBI	1172|AF317511.1|AF317511|betalactams|Class_B_betalactamases|VIM	gi|952947758|gb|KT124311.1|1-801 gi|941350200|gb|KT345946.1|25800-26600 gi|930190865|emb|LN555650.1|262021-261221 gi|930189590|emb|HG530658.1|197729-196929 gi|887516996|gb|KR338351.1|1181-1981 gi|730042884|gb|KJ571202.1|3646-4446 gi|826570395|gb|KR262557.1|718-1518 gi|825088700|gb|KP975077.1|107339-106539 gi|821393026|gb|KP873172.1|23963-23163 gi|821392896|gb|KP873171.1|19528-18728 gi|821392896|gb|KP873171.1|20442-19642 gi|821392896|gb|KP873171.1|21995-21195
Resfinder	1172|AF317511.1|AF317511|betalactams|Class_B_betalactamases|VIM	blaVIM-1_1_Y18050
ARG-ANNOT	959|M97297.1|TRNVAN|Glycopeptides|VanA-type_accessory_protein|VANZA	(Gly)VanZ-A:M97297:10116-10601:486
CARD	959|M97297.1|TRNVAN|Glycopeptides|VanA-type_accessory_protein|VANZA	@phgb|M97297|10116-10601|ARO:3002962|vanZA [Enterococcus faecium]
NCBI	959|M97297.1|TRNVAN|Glycopeptides|VanA-type_accessory_protein|VANZA	gi|975002886|gb|CP013996.1|6140-6625 gi|925192758|gb|CP012594.1|30623-30138 gi|830872341|gb|KR349520.1|12111-12596 gi|816206772|gb|KR047792.1|12110-12595 gi|409183623|gb|JQ663598.1|14479-13994 gi|695226492|ref|NG_041525.1|12380-12865 gi|359465430|dbj|AB611033.1|10315-9830 gi|343429995|dbj|AB663321.1|10116-10601 gi|319739722|gb|HQ115078.1|15123-14638 gi|312836941|dbj|AB563188.1|59565-59080
Resfinder	959|M97297.1|TRNVAN|Glycopeptides|VanA-type_accessory_protein|VANZA	VanZ-A_1_FJ866609
ARG-ANNOT	Gly|VanY-A|M97297|9052-9963|912|Glycopeptides|VanA-type_accessory_protein|VANYA	(Gly)VanY-A:M97297:9052-9963:912
CARD	Gly|VanY-A|M97297|9052-9963|912|Glycopeptides|VanA-type_accessory_protein|VANYA	@phgb|M97297|9052-9963|ARO:3002955|vanYA [Enterococcus faecium]
NCBI	Gly|VanY-A|M97297|9052-9963|912|Glycopeptides|VanA-type_accessory_protein|VANYA	gi|830872341|gb|KR349520.1|11047-11958 gi|695226492|ref|NG_041525.1|11316-12227 gi|359465430|dbj|AB611033.1|11379-10468 gi|695224489|ref|NG_041086.1|3155-2244 gi|695220799|ref|NG_039568.1|11053-11964 gi|196158933|emb|AM932524.1|9052-9963 gi|190350257|emb|AM931300.1|16383-15472 gi|186886499|gb|EU599211.1|10257-11168 gi|124012095|emb|AM410096.1|10447-9536 gi|121490884|emb|AM296544.1|10447-9536
Resfinder	Gly|VanY-A|M97297|9052-9963|912|Glycopeptides|VanA-type_accessory_protein|VANYA	VanY-A_2_M97297
NCBI	Mdr|AY769962.1|gene1|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEAI	gi|984881271|gb|CP014215.1|3001623-3002873 gi|974022331|gb|CP013924.1|738992-737742 gi|827403829|gb|CP010779.1|743554-742304 gi|803657307|gb|CP007535.2|1085870-1087120 gi|615556143|gb|CP007577.1|2849370-2850620 gi|586958174|gb|CP006963.1|3316254-3317504 gi|546200742|dbj|AP013357.1|762283-761033 gi|522344435|gb|CP003849.1|3142289-3143539 gi|522324570|gb|CP003846.1|3231571-3232821 gi|407899266|gb|CP003856.1|3440311-3441561
CARD	617|HQ875016.1|HQ875016|Phenicol|Phenicol_efflux_pumps|CML	@phgb|U12338|6941-8201|ARO:3002693|cmlA1 [Pseudomonas aeruginosa]
NCBI	617|HQ875016.1|HQ875016|Phenicol|Phenicol_efflux_pumps|CML	gi|937637492|gb|KT334335.1|95710-94451 gi|917657445|gb|KR827684.1|44001-45260 gi|909636816|emb|LN850165.1|97922-99181 gi|909636430|emb|LN850162.1|2609-3868 gi|828971497|gb|CP011644.1|28238-29497 gi|754341646|gb|CP010575.1|10820-12079 gi|743008998|gb|CP010362.1|63970-62711 gi|742999823|gb|CP010396.1|6443-5184 gi|660582341|gb|CP008800.1|55144-56403 gi|587656709|gb|KF921569.1|3272-4531
ARG-ANNOT	Bla|SHV-65|DQ174305|5-865|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-65:DQ174305:5-865:861
CARD	Bla|SHV-65|DQ174305|5-865|861|betalactams|Class_A_betalactamases|SHV	@phgb|DQ174305|4-865|ARO:3001120|SHV-65 [Klebsiella pneumoniae]
Lahey	Bla|SHV-65|DQ174305|5-865|861|betalactams|Class_A_betalactamases|SHV	ABA06587.1 DQ174305.1:5-865
NCBI	Bla|SHV-65|DQ174305|5-865|861|betalactams|Class_A_betalactamases|SHV	gi|74422852|gb|DQ174305.1|5-865
Resfinder	Bla|SHV-65|DQ174305|5-865|861|betalactams|Class_A_betalactamases|SHV	blaSHV-65_1_DQ174305
ARG-ANNOT	Bla|OXA-183|HQ111474|1057-1857|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-183:HQ111474:1057-1857:801
CARD	Bla|OXA-183|HQ111474|1057-1857|801|betalactams|Class_D_betalactamases|OXA	@phgb|HQ111474|1056-1857|ARO:3001475|OXA-183 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-183|HQ111474|1057-1857|801|betalactams|Class_D_betalactamases|OXA	ADV41666.1 HQ111474.1:1057-1857
NCBI	Bla|OXA-183|HQ111474|1057-1857|801|betalactams|Class_D_betalactamases|OXA	gi|318136684|gb|HQ111474.1|1057-1857
Resfinder	Bla|OXA-183|HQ111474|1057-1857|801|betalactams|Class_D_betalactamases|OXA	blaOXA-183_1_HQ111474
CARD	AGly|NC_004973.1.1449625|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	@phgb|NC_004973|7467-8271|ARO:3002639|APH(3'')-Ib [uncultured bacterium]
NCBI	AGly|NC_004973.1.1449625|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|575453416|gb|CP006956.1|297940-298743 gi|575450852|gb|CP006955.1|2356229-2355426 gi|481063295|gb|CP005383.1|2131038-2130235 gi|399920115|gb|JN202624.1|3810-4613 gi|380873200|gb|CP003314.1|350-1153 gi|224184694|gb|FJ197818.1|2501-3304 gi|695213097|ref|NG_036548.1|2601-3404 gi|189916535|gb|CP001093.1|2621-3424 gi|116734647|gb|EF015636.1|297-1100 gi|66840966|emb|AJ877041.1|984-1787
CARD	gi|698174187|gb|KM087848.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087848|0-1140|ARO:3002151|DHA-20 [Citrobacter koseri]
Lahey	gi|698174187|gb|KM087848.1|betalactams|Class_C_betalactamases|DHA	AIT76101.1 KM087848.1:1-1140
NCBI	gi|698174187|gb|KM087848.1|betalactams|Class_C_betalactamases|DHA	gi|698174187|gb|KM087848.1|1-1140 gi|602655136|gb|KJ135989.1|1-1085
ARG-ANNOT	1286|U14749.1|PAU14749|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-4:AY913772:1600-2466:867
CARD	1286|U14749.1|PAU14749|betalactams|Class_A_betalactamases|CARB	@phgb|U14749|690-1557|ARO:3002243|CARB-4 [Pseudomonas aeruginosa]
Lahey	1286|U14749.1|PAU14749|betalactams|Class_A_betalactamases|CARB	AAC09012.1 U14749.1:691-1557
NCBI	1286|U14749.1|PAU14749|betalactams|Class_A_betalactamases|CARB	gi|225393060|gb|FJ785525.1|4374-5240 gi|62719426|gb|AY913772.1|1600-2466 gi|62719421|gb|AY913771.1|1565-2431 gi|695198358|ref|NG_034961.1|691-1557
Resfinder	1286|U14749.1|PAU14749|betalactams|Class_A_betalactamases|CARB	blaCARB-4_1_U14749
ARG-ANNOT	122|AJ579365.1|AJ579365|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	(MLS)LsaB:AJ579365:4150-5628:1479
CARD	122|AJ579365.1|AJ579365|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	@phgb|NC_005076|4149-5628|ARO:3003111|lsaB [Staphylococcus sciuri]
NCBI	122|AJ579365.1|AJ579365|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	gi|33352197|emb|AJ579365.1|4150-5628 gi|508125053|gb|KC736552.1|1-726
Resfinder	122|AJ579365.1|AJ579365|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	lsa(B)_1_AJ579365
ARG-ANNOT	Flq|QnrB46|JQ349154|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB46:JQ349154:1-680:680
NCBI	Flq|QnrB46|JQ349154|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|375332212|gb|JQ349154.1|1-680
Resfinder	Flq|QnrB46|JQ349154|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB46_1_JQ349154
CARD	Bla|OXA-17_1_AF060206|betalactams|Class_D_betalactamases|OXA	@phgb|AF060206|0-774|ARO:3001412|OXA-17 [Pseudomonas aeruginosa]
NCBI	Bla|OXA-17_1_AF060206|betalactams|Class_D_betalactamases|OXA	gi|238865601|gb|GQ139471.1|1961-2735 gi|695212024|ref|NG_036316.1|2743-3517 gi|88911232|gb|DQ393782.1|1661-2435 gi|3089618|gb|AF060206.1|AF060206|1-775
CARD	Bla|GQ891757.1|gene9|betalactams|Class_A_betalactamases|PER	@phgb|GQ891757|7714-8641|ARO:3002363|PER-1 [Aeromonas caviae]
NCBI	Bla|GQ891757.1|gene9|betalactams|Class_A_betalactamases|PER	gi|298104543|gb|GQ891757.1|7715-8641
NCBI	Sul|sul2_15_FJ968160|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|954171462|gb|KT151662.1|76901-77716 gi|954171374|gb|KT151661.1|76901-77716 gi|954171188|gb|KT151659.1|76865-77680 gi|954171094|gb|KT151658.1|76873-77688 gi|954171002|gb|KT151657.1|76901-77716 gi|954170914|gb|KT151656.1|76901-77716 gi|954170819|gb|KT151655.1|76901-77716 gi|954170731|gb|KT151654.1|76901-77716 gi|787519209|gb|KJ817377.1|2902-2087 gi|787519087|gb|KJ817376.1|78428-79243
Resfinder	Sul|sul2_15_FJ968160|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_15_FJ968160
ARG-ANNOT	Bla|SME-1|Z28968|128-1012|885|betalactams|Class_A_betalactamases|SME	(Bla)SME-1:Z28968:128-1012:885
CARD	Bla|SME-1|Z28968|128-1012|885|betalactams|Class_A_betalactamases|SME	@phgb|Z28968|0-885|ARO:3002379|SME-1 [Serratia marcescens]
Lahey	Bla|SME-1|Z28968|128-1012|885|betalactams|Class_A_betalactamases|SME	CAA82281.1 Z28968.1:128-1012
NCBI	Bla|SME-1|Z28968|128-1012|885|betalactams|Class_A_betalactamases|SME	gi|472863|emb|Z28968.1|128-1012 gi|510203|emb|Z30237.1|95-1
Resfinder	Bla|SME-1|Z28968|128-1012|885|betalactams|Class_A_betalactamases|SME	blaSME-1_1_Z28968
CARD	CARD|phgb|AF030344|0-1260|ARO:3000181|tetV|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETV	@phgb|AF030344|0-1260|ARO:3000181|tetV [Mycobacterium smegmatis str. MC2 155]
NCBI	CARD|phgb|AF030344|0-1260|ARO:3000181|tetV|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETV	gi|698956000|gb|CP009496.1|5287677-5286418 gi|698947717|gb|CP009495.1|5287695-5286436 gi|698938524|gb|CP009494.1|5287642-5286383 gi|399228992|gb|CP001663.1|5289210-5287951 gi|118168627|gb|CP000480.1|5287598-5286339 gi|2613095|gb|AF030344.1|AF030344|462-1721
Resfinder	CARD|phgb|AF030344|0-1260|ARO:3000181|tetV|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETV	tet(V)_1_AF030344
ARG-ANNOT	Bla|SHV-56|AY352599|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-56:AY352599:1-861:861
NCBI	Bla|SHV-56|AY352599|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|33943601|gb|AY352599.1|1-861
Resfinder	Bla|SHV-56|AY352599|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-56_2_AY352599
NCBI	Sul|sul1_14_AJ517791|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695209922|ref|NG_035908.1|2653-3492
Resfinder	Sul|sul1_14_AJ517791|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_14_AJ517791
ARG-ANNOT	Bla|CTX-M-136|KC351754|158-1033|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-136:KC351754:158-1033:876
CARD	Bla|CTX-M-136|KC351754|158-1033|876|betalactams|Class_A_betalactamases|CTX	@phgb|KC351754|157-1033|ARO:3001995|CTX-M-136 [Proteus mirabilis]
Lahey	Bla|CTX-M-136|KC351754|158-1033|876|betalactams|Class_A_betalactamases|CTX	AGG08693.1 KC351754.1:158-1033
NCBI	Bla|CTX-M-136|KC351754|158-1033|876|betalactams|Class_A_betalactamases|CTX	gi|452107691|gb|KC351754.1|158-1033
Resfinder	Bla|CTX-M-136|KC351754|158-1033|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-136_1_KC351754
NCBI	Flq|CP001918.1|gene3562|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|295054830|gb|CP001918.1|3612829-3610193
NCBI	gi|591542788|gb|KJ207200.1|betalactams|Class_C_betalactamases|MIR	gi|591542788|gb|KJ207200.1|547-1693
ARG-ANNOT	Tmt|DfrC|Z48233|337-822|486|Trimethoprim|Dihydrofolate_reductase|DFRC|RequiresSNPConfirmation	(Tmt)DfrC:Z48233:337-822:486
NCBI	Tmt|DfrC|Z48233|337-822|486|Trimethoprim|Dihydrofolate_reductase|DFRC|RequiresSNPConfirmation	gi|760489133|gb|CP010942.1|983280-982795 gi|672710284|emb|HG813242.1|1147389-1146904 gi|886708|emb|Z48233.1|337-822 gi|57636010|gb|CP000029.1|1017478-1016993 gi|27316888|gb|AE015929.1|1129419-1128934
CARD	CARD|phgb|U00096|3413863-3415021|ARO:3000499|acrE|Aminoglycosides|Aminoglycoside_efflux_pumps|ACRE	@phgb|U00096|3413863-3415021|ARO:3000499|acrE [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|3413863-3415021|ARO:3000499|acrE|Aminoglycosides|Aminoglycoside_efflux_pumps|ACRE	gi|985000614|gb|CP014225.1|1611064-1612222 gi|958627747|gb|CP013253.1|9797-8639 gi|939732440|gb|CP011343.2|3389598-3390756 gi|939731527|gb|CP011342.2|3390252-3391410 gi|937526251|gb|CP012870.1|1227792-1226634 gi|937521852|gb|CP012869.1|1227792-1226634 gi|937517453|gb|CP012868.1|1227792-1226634 gi|932857508|emb|LN877770.1|4238360-4239518 gi|923416119|gb|CP011113.1|3370581-3371739 gi|899729770|gb|CP012127.1|3388309-3389467
NCBI	AGly|AY339625.2|gene5|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|695210321|ref|NG_035929.1|1729-914 gi|512492521|gb|JX424614.1|31121-30308 gi|297787483|gb|GU585907.1|23579-24392
CARD	6|AF173226.1|AF173226|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	@phgb|AF173226|2558-3755|ARO:3003051|smeA [Stenotrophomonas maltophilia]
NCBI	6|AF173226.1|AF173226|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	gi|5764623|gb|AF173226.1|2559-3755
ARG-ANNOT	gi|360040237|gb|JN861782.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-215:JN861782:1-825:825
CARD	gi|360040237|gb|JN861782.1|betalactams|Class_D_betalactamases|OXA	@phgb|JN861782|0-828|ARO:3001713|OXA-214 [Acinetobacter haemolyticus]
Lahey	gi|360040237|gb|JN861782.1|betalactams|Class_D_betalactamases|OXA	AEV91553.1 JN861782.1:1-828
NCBI	gi|360040237|gb|JN861782.1|betalactams|Class_D_betalactamases|OXA	gi|360040237|gb|JN861782.1|1-828
Resfinder	gi|360040237|gb|JN861782.1|betalactams|Class_D_betalactamases|OXA	blaOXA-214_1_JN861782
CARD	AGly|aac6-prime-Ib-cr_3_EF210035|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|EU085533|0-519|ARO:3002591|AAC(6')-Ib-Suzhou [Enterobacter cloacae]
NCBI	AGly|aac6-prime-Ib-cr_3_EF210035|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|125656349|gb|EF210035.1|1-519
Resfinder	AGly|aac6-prime-Ib-cr_3_EF210035|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')Ib-cr_3_EF210035;aac(6')Ib-cr_3_EF210035
CARD	gi|537430802|gb|KF057031.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF057031|0-825|ARO:3001685|OXA-314 [Acinetobacter baumannii]
Lahey	gi|537430802|gb|KF057031.1|betalactams|Class_D_betalactamases|OXA	AGU69252.1 KF057031.1:1-825
NCBI	gi|537430802|gb|KF057031.1|betalactams|Class_D_betalactamases|OXA	gi|537430802|gb|KF057031.1|1-825
ARG-ANNOT	Bla|SHV-11|HM751098|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-11:HM751098:1-861:861
NCBI	Bla|SHV-11|HM751098|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|971338783|gb|CP006659.2|2613825-2612965 gi|940785863|gb|KT362706.1|6514-7374 gi|902619892|gb|CP011989.1|2698555-2699415 gi|902613520|gb|CP011985.1|2690969-2691829 gi|902606058|gb|CP011976.1|2757437-2758297 gi|902598956|gb|CP011980.1|2678237-2679097 gi|828971803|gb|CP011647.1|3732734-3731874 gi|828906158|gb|CP011578.1|720736-719876 gi|743003782|gb|CP010361.1|2704544-2705404 gi|742994340|gb|CP010392.1|2697062-2697922
Resfinder	Bla|SHV-11|HM751098|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-11_2_HM751098
Lahey	Bla|OXA-136_1_EU086833|betalactams|Class_D_betalactamases|OXA	ABW76137.1 EU086833.1:89-898
NCBI	Bla|OXA-136_1_EU086833|betalactams|Class_D_betalactamases|OXA	gi|925170772|gb|KR182164.1|1-810 gi|158634581|gb|EU086833.1|89-898
Resfinder	Bla|OXA-136_1_EU086833|betalactams|Class_D_betalactamases|OXA	blaOXA-136_1_EU086833
ARG-ANNOT	Tet|TetO|M18896|207-2126|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETO	(Tet)TetO:M18896:207-2126:1920
CARD	Tet|TetO|M18896|207-2126|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETO	@phgb|M18896|0-1920|ARO:3000190|tetO [Campylobacter jejuni]
NCBI	Tet|TetO|M18896|207-2126|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETO	gi|542827506|gb|CP006710.1|10427-8508 gi|315059176|gb|CP001961.1|8632-6713 gi|167583223|emb|AM884250.1|75-1994 gi|32189794|gb|M18896.2|CAJTRCCRA|207-2126
Resfinder	Tet|TetO|M18896|207-2126|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETO	tet(O)_1_M18896
CARD	984|AB116646.1|AB116646|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AB116646|429-903|ARO:3002563|AAC(6')-Isa [Streptomyces albulus]
NCBI	984|AB116646.1|AB116646|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|785755366|gb|CP006871.1|722168-722641 gi|42491249|dbj|AB116646.1|430-903
Resfinder	984|AB116646.1|AB116646|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Isa_1_AB116646
CARD	gi|478437782|gb|KC465199.1|betalactams|Class_A_betalactamases|KPC	@phgb|KC465199|0-882|ARO:3002326|KPC-16 [Klebsiella pneumoniae]
Lahey	gi|478437782|gb|KC465199.1|betalactams|Class_A_betalactamases|KPC	AGJ01153.1 KC465199.1:1-882
NCBI	gi|478437782|gb|KC465199.1|betalactams|Class_A_betalactamases|KPC	gi|478437782|gb|KC465199.1|1-882
Resfinder	gi|478437782|gb|KC465199.1|betalactams|Class_A_betalactamases|KPC	blaKPC-16_1_KC465199
NCBI	MLS|ereA_3_AF326209|MLS|Macrolide_esterases|EREA	gi|14582735|gb|AF326209.1|76-1302 gi|954629879|gb|CP013215.1|280834-280647 gi|948288909|gb|KR259328.1|932-1119 gi|908266278|gb|CP012170.1|140874-141061 gi|659224503|gb|KJ668707.1|918-1105
Resfinder	MLS|ereA_3_AF326209|MLS|Macrolide_esterases|EREA	ere(A)_3_AF326209
NCBI	Mdr|AP009048.1|gene3414|Multi-drug_resistance|MDR_regulator|CPXAR	gi|985000614|gb|CP014225.1|2302870-2302172 gi|984297099|gb|CP014197.1|4477427-4478125 gi|975003027|gb|CP010829.1|4321600-4320902 gi|958627747|gb|CP013253.1|3897459-3898157 gi|939732440|gb|CP011343.2|4086429-4085731 gi|939731527|gb|CP011342.2|4087195-4086497 gi|937526251|gb|CP012870.1|535985-536683 gi|937521852|gb|CP012869.1|535985-536683 gi|937517453|gb|CP012868.1|535985-536683 gi|932857508|emb|LN877770.1|4928433-4927735
ARG-ANNOT	Flq|QepA2|EU847537|1672-3107|1536|Fluoroquinolones|Quinolone_active_efflux|QEPA	(Flq)QepA2:EU847537:1672-3107:1536
NCBI	Flq|QepA2|EU847537|1672-3107|1536|Fluoroquinolones|Quinolone_active_efflux|QEPA	gi|695213577|ref|NG_036622.1|1672-3207 gi|908210419|dbj|LC066224.1|365-1 gi|226295419|gb|FJ842530.1|1-216
Resfinder	Flq|QepA2|EU847537|1672-3107|1536|Fluoroquinolones|Quinolone_active_efflux|QEPA	qepA2_1_EU847537
CARD	Bla|KJ188748.1|gene1|betalactams|Class_A_betalactamases|SME	@phgb|KJ188748|0-885|ARO:3002383|SME-5 [Serratia marcescens]
Lahey	Bla|KJ188748.1|gene1|betalactams|Class_A_betalactamases|SME	AHV85514.1 KJ188748.1:1-885
NCBI	Bla|KJ188748.1|gene1|betalactams|Class_A_betalactamases|SME	gi|605052117|gb|KJ188748.1|1-885 gi|510203|emb|Z30237.1|95-1
CARD	Phe|AF024666.2|gene33|Phenicol|Phenicol_efflux_pumps|CMXAB	@phgb|AF024666|35934-37110|ARO:3002703|cmx [Corynebacterium striatum]
NCBI	Phe|AF024666.2|gene33|Phenicol|Phenicol_efflux_pumps|CMXAB	gi|937559777|gb|KT454971.1|355051-356226 gi|825088620|gb|KP975076.1|21056-19881 gi|672593547|gb|CP009211.1|162358-161183 gi|448276180|gb|CP004085.1|1763614-1762439 gi|171850984|emb|AM942444.1|888074-886899 gi|171850984|emb|AM942444.1|1797231-1796056 gi|164521141|gb|DQ914960.2|17785-16610 gi|150958624|gb|CP000744.1|3872405-3871230 gi|9945780|gb|AF024666.2|17052-15877 gi|9945780|gb|AF024666.2|35935-37110
NCBI	ACou|AE016830.1|gene1599|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|29350190|gb|AE016830.1|1575737-1573680
ARG-ANNOT	Bla|CTX-M-21|AJ416346|557-1432|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-21:AJ416346:557-1432:876
CARD	Bla|CTX-M-21|AJ416346|557-1432|876|betalactams|Class_A_betalactamases|CTX	@phgb|AJ416346|556-1432|ARO:3001883|CTX-M-21 [Escherichia coli]
Lahey	Bla|CTX-M-21|AJ416346|557-1432|876|betalactams|Class_A_betalactamases|CTX	CAD08929.1 AJ416346.1:557-1432
NCBI	Bla|CTX-M-21|AJ416346|557-1432|876|betalactams|Class_A_betalactamases|CTX	gi|16444916|emb|AJ416346.1|557-1432
Resfinder	Bla|CTX-M-21|AJ416346|557-1432|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-21_1_AJ416346
CARD	CARD|phgb|EU269034|1479-2223|ARO:3002667|rmtD|Aminoglycosides|16S_rRNA_methyltransferases|RMTD	@phgb|EU269034|1479-2223|ARO:3002667|rmtD [Klebsiella pneumoniae]
NCBI	CARD|phgb|EU269034|1479-2223|ARO:3002667|rmtD|Aminoglycosides|16S_rRNA_methyltransferases|RMTD	gi|970697516|gb|KT935445.1|40165-39421 gi|970697516|gb|KT935445.1|46764-46020 gi|937559777|gb|KT454971.1|363947-363203 gi|695213116|ref|NG_036550.1|1480-2224 gi|164521141|gb|DQ914960.2|8889-9633 gi|469761626|gb|KC593856.1|491-1 gi|323099809|gb|HQ876773.1|423-1
ARG-ANNOT	AGly|AadA1|M95287|3320-4111|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA1:M95287:3320-4111:792;(AGly)AadA1b:JN596991:1364-2155:792
NCBI	AGly|AadA1|M95287|3320-4111|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|957761167|gb|KT440883.1|4062-4853 gi|953357725|gb|KT290952.1|1807-2598 gi|724471669|gb|KM659858.1|1807-2598 gi|551485226|gb|KF525320.1|475-1266 gi|478894152|gb|KC511628.1|5753-6544 gi|425862497|gb|JX566714.1|1807-2598 gi|425862433|gb|JX566706.1|1807-2598 gi|409691378|gb|JX646702.1|48-839 gi|695226632|ref|NG_041549.1|1779-2570 gi|374282203|gb|JN596280.1|5860-6651
Resfinder	AGly|AadA1|M95287|3320-4111|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA1_4_M95287
NCBI	MLS|ermX_4_NC_005206|MLS|23S_rRNA_methyltransferases|ERMX	gi|927041813|gb|CP012649.1|2201510-2202364 gi|89513168|gb|DQ390458.1|27639-28493 gi|37993850|gb|AY255627.1|3668-4522 gi|37993850|gb|AY255627.1|3582-3654
Resfinder	MLS|ermX_4_NC_005206|MLS|23S_rRNA_methyltransferases|ERMX	erm(X)_4_NC_005206
CARD	Bla|AF231133.1|gene3|betalactams|Class_D_betalactamases|OXA	@phgb|AF231133|1345-2146|ARO:3001423|OXA-28 [Pseudomonas aeruginosa]
NCBI	Bla|AF231133.1|gene3|betalactams|Class_D_betalactamases|OXA	gi|311629587|gb|FJ207466.2|2205-3006 gi|211908033|gb|FJ374756.1|1337-2138 gi|695199682|ref|NG_035290.1|1346-2147
ARG-ANNOT	859|U41471.1|MFU41471|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	(AGly)Aac2-Ib:U41471:266-822:588
CARD	859|U41471.1|MFU41471|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	@phgb|U41471|264-852|ARO:3002524|AAC(2')-Ib [Mycobacterium fortuitum]
NCBI	859|U41471.1|MFU41471|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	gi|725869003|gb|CP009914.1|383052-382465 gi|1244711|gb|U41471.1|MFU41471|265-852 gi|672354214|gb|CP009110.1|1554824-1554851
Resfinder	859|U41471.1|MFU41471|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	aac(2')-Ib_1_U41471
NCBI	Sul|NC_007793.3915320|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|941146344|gb|CP007676.1|516912-517715 gi|941142962|gb|CP007672.1|541645-542448 gi|941139768|gb|CP007657.1|542121-542924 gi|899756207|gb|CP012119.1|1376783-1375980 gi|899750970|gb|CP012120.1|396378-395575 gi|828461663|gb|CP007674.1|525195-525998 gi|828444881|gb|CP007670.1|554935-555738 gi|827440804|gb|CP011526.1|497861-498664 gi|777225872|emb|LN831048.1|36428-37231 gi|743649775|gb|CP010300.1|551994-552797
CARD	CARD|pvgb|NC_002952|594518-598142|ARO:3003291|Staphylococcus|Lipopeptides|Daptomycin-resistant_beta-subunit_of_RNA_polymerase_RpoC|RPOC|RequiresSNPConfirmation	@pvgb|NC_002952|594518-598142|ARO:3003291|Staphylococcus aureus rpoC conferring resistance to daptomycin [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	CARD|pvgb|NC_002952|594518-598142|ARO:3003291|Staphylococcus|Lipopeptides|Daptomycin-resistant_beta-subunit_of_RNA_polymerase_RpoC|RPOC|RequiresSNPConfirmation	gi|701162461|emb|LN626917.1|541120-544744 gi|532126991|gb|CP002388.1|487315-490939 gi|49240382|emb|BX571856.1|594519-598143
NCBI	1531|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|970698093|gb|KT988018.1|14750-15949 gi|974751143|gb|KU238092.1|6779-5580 gi|975048878|gb|CP013962.1|2246546-2247745 gi|973710347|gb|CP013833.1|73946-75145 gi|966626646|gb|CP013657.1|127298-126099 gi|959153704|gb|CP012993.1|50346-49147 gi|959147947|gb|CP012988.1|42873-44072 gi|952556149|emb|LN879484.1|75404-74205 gi|944397480|gb|CP013024.1|63015-64214 gi|933686806|gb|KT779550.1|83580-84779
Resfinder	1531|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tet(A)_4_AJ517790
NCBI	Gly|VanW-G_1_AY271782|Glycopeptides|VanG-type_accessory_protein|VANWG	gi|33355827|gb|AY271782.1|20202-21047
Resfinder	Gly|VanW-G_1_AY271782|Glycopeptides|VanG-type_accessory_protein|VANWG	VanW-G_1_AY271782
CARD	Bla|PAO2_FJ666065|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666065|0-1194|ARO:3002497|PDC-1 [Pseudomonas aeruginosa PAO1]
Lahey	Bla|PAO2_FJ666065|betalactams|Class_C_betalactamases|PDC	ACQ82807.1 FJ666065.1:1-1194
NCBI	Bla|PAO2_FJ666065|betalactams|Class_C_betalactamases|PDC	gi|926451317|emb|LN871187.1|921807-920614 gi|553895034|gb|CP006832.1|4594024-4595217 gi|553886202|gb|CP006831.1|4595109-4596302 gi|543879514|gb|CP006705.1|4373612-4374805 gi|229597519|gb|FJ666065.1|1-1194 gi|110227054|gb|AE004091.2|4594029-4595222 gi|45272|emb|X54719.1|554-1741
Resfinder	Bla|PAO2_FJ666065|betalactams|Class_C_betalactamases|PDC	blaPAO_2_FJ666065
CARD	CARD|phgb|AL009126|1376854-1377172|ARO:3003064|ykkD|Multi-drug_resistance|Multi-drug_efflux_pumps|YKKD	@phgb|AL009126|1376854-1377172|ARO:3003064|ykkD [Bacillus subtilis subsp. subtilis str. 168]
NCBI	CARD|phgb|AL009126|1376854-1377172|ARO:3003064|ykkD|Multi-drug_resistance|Multi-drug_efflux_pumps|YKKD	gi|983204966|gb|CP014166.1|1356122-1356440 gi|807072327|gb|CP011115.1|1376858-1377176 gi|749183975|gb|CP010314.1|1356347-1356665 gi|728887195|gb|CP010053.1|1376617-1376935 gi|728882887|gb|CP010052.1|1376867-1377185 gi|724425628|emb|LN680001.1|1376832-1377150 gi|723796434|emb|LN649259.1|1376829-1377147 gi|649013680|gb|CP008698.1|1360406-1360724 gi|649009321|gb|CP007800.1|1360406-1360724 gi|558566549|gb|CP006881.1|1339892-1340210
ARG-ANNOT	gi|47109375|emb|AJ704396.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-96:AJ704396:1-876:876
CARD	gi|47109375|emb|AJ704396.1|betalactams|Class_A_betalactamases|CTX	@phgb|AJ704396|0-876|ARO:3001956|CTX-M-96 [Klebsiella pneumoniae]
Lahey	gi|47109375|emb|AJ704396.1|betalactams|Class_A_betalactamases|CTX	CAG28417.1 AJ704396.1:1-876
NCBI	gi|47109375|emb|AJ704396.1|betalactams|Class_A_betalactamases|CTX	gi|940376853|gb|KR811026.1|1-876 gi|47109375|emb|AJ704396.1|1-876
Resfinder	gi|47109375|emb|AJ704396.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-96_1_AJ704396
ARG-ANNOT	Flq|OqxA|EU370913|46652-47827|1176|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXA	(Flq)OqxA:EU370913:46652-47827:1176
NCBI	Flq|OqxA|EU370913|46652-47827|1176|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXA	gi|975048878|gb|CP013962.1|236090-234915 gi|971338783|gb|CP006659.2|4169699-4170874 gi|961494526|gb|KT282968.1|26774-25599 gi|937637492|gb|KT334335.1|77543-76368 gi|928083869|gb|CP012682.1|121379-122554 gi|902619892|gb|CP011989.1|1231983-1230808 gi|902613520|gb|CP011985.1|1233197-1232022 gi|902606058|gb|CP011976.1|1202399-1201224 gi|902598956|gb|CP011980.1|1212921-1211746 gi|820773184|gb|KM877269.1|77553-76378
Resfinder	Flq|OqxA|EU370913|46652-47827|1176|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXA	oqxA_1_EU370913
CARD	CARD|phgb|EF540343|1059-1440|ARO:3000160|blaI|betalactams|Penicillin_binding_protein_regulator|BLAI	@phgb|EF540343|1059-1440|ARO:3000160|blaI [Bacillus clausii]
NCBI	CARD|phgb|EF540343|1059-1440|ARO:3000160|blaI|betalactams|Penicillin_binding_protein_regulator|BLAI	gi|922061703|gb|CP012475.1|1750870-1751251 gi|155793482|gb|EF540343.1|1060-1441
CARD	Bla|OXA-333_1_KF203107|betalactams|Class_D_betalactamases|OXA	@phgb|KF203107|0-825|ARO:3001521|OXA-333 [Acinetobacter johnsonii]
Lahey	Bla|OXA-333_1_KF203107|betalactams|Class_D_betalactamases|OXA	AGW16415.1 KF203107.1:1-825
NCBI	Bla|OXA-333_1_KF203107|betalactams|Class_D_betalactamases|OXA	gi|544207413|gb|KF203107.1|1-825
Resfinder	Bla|OXA-333_1_KF203107|betalactams|Class_D_betalactamases|OXA	blaOXA-333_1_KF203107
Lahey	gi|734665100|gb|KM589641.1|betalactams|Class_D_betalactamases|OXA	AJA30430.1 KM589641.1:1-786
NCBI	gi|734665100|gb|KM589641.1|betalactams|Class_D_betalactamases|OXA	gi|734665100|gb|KM589641.1|1-786
CARD	CARD|phgb|AJ012256|208-1069|ARO:3000943|TEM-77|betalactams|Class_A_betalactamases|TEM	@phgb|AJ012256|208-1069|ARO:3000943|TEM-77 [Proteus mirabilis]
NCBI	CARD|phgb|AJ012256|208-1069|ARO:3000943|TEM-77|betalactams|Class_A_betalactamases|TEM	gi|6688988|emb|AJ012256.1|209-1070
CARD	Amp|HM140977.1|gene1|Lipopeptides|Phosphotidylglycerol_lysyltransferase|MPRF|RequiresSNPConfirmation	@phgb|HM140977|0-2511|ARO:3000863|mprF [Staphylococcus aureus]
NCBI	Amp|HM140977.1|gene1|Lipopeptides|Phosphotidylglycerol_lysyltransferase|MPRF|RequiresSNPConfirmation	gi|300078708|gb|HM140975.1|1-2511
ARG-ANNOT	Bla|CTX-M-9|AF174129|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-9:AF174129:1-876:876;(Bla)CTX-M-13:AF252621:1-876:876
CARD	Bla|CTX-M-9|AF174129|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AF174129|6335-7211|ARO:3001872|CTX-M-9 [Escherichia coli]
Lahey	Bla|CTX-M-9|AF174129|1-876|876|betalactams|Class_A_betalactamases|CTX	AAF05311.2 AF174129.3:6336-7211
NCBI	Bla|CTX-M-9|AF174129|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|825088700|gb|KP975077.1|39408-38533 gi|516560780|gb|JX515588.1|200604-199729 gi|299483205|gb|HM569735.1|1115-1990 gi|130918109|gb|EF441350.1|132-1007 gi|695200454|ref|NG_036140.1|5317-6192 gi|695208190|ref|NG_035493.1|6336-7211 gi|695200140|ref|NG_035386.1|1-876 gi|71273537|emb|AM040708.1|5582-6457 gi|16304825|emb|AJ416345.1|132-1005
Resfinder	Bla|CTX-M-9|AF174129|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-9_1_AF174129
CARD	Bla|KJ020573.1|gene1|betalactams|Class_A_betalactamases|CTX	@phgb|KJ020573|274-1150|ARO:3002002|CTX-M-144 [Escherichia coli]
Lahey	Bla|KJ020573.1|gene1|betalactams|Class_A_betalactamases|CTX	AHX39588.1 KJ020573.1:275-1150
NCBI	Bla|KJ020573.1|gene1|betalactams|Class_A_betalactamases|CTX	gi|695228197|ref|NG_041750.1|275-1150
CARD	CARD|phgb|AM411407|0-876|ARO:3001921|CTX-M-60|betalactams|Class_A_betalactamases|CTX	@phgb|AM411407|0-876|ARO:3001921|CTX-M-60 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AM411407|0-876|ARO:3001921|CTX-M-60|betalactams|Class_A_betalactamases|CTX	gi|121495528|emb|AM411407.1|1-877
ARG-ANNOT	Bla|TEM-107|AY101764|207-1067|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-107:AY101764:207-1067:861
CARD	Bla|TEM-107|AY101764|207-1067|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY101764|206-1067|ARO:3000970|TEM-107 [Klebsiella pneumoniae]
Lahey	Bla|TEM-107|AY101764|207-1067|861|betalactams|Class_A_betalactamases|TEM	AAM52215.1 AY101764.1:207-1067
NCBI	Bla|TEM-107|AY101764|207-1067|861|betalactams|Class_A_betalactamases|TEM	gi|21464495|gb|AY101764.1|207-1067
Resfinder	Bla|TEM-107|AY101764|207-1067|861|betalactams|Class_A_betalactamases|TEM	blaTEM-107_1_AY101764
ARG-ANNOT	Bla|CMY-63|HQ650104|64-1209|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-63:HQ650104:64-1209:1146
CARD	Bla|CMY-63|HQ650104|64-1209|1146|betalactams|Class_C_betalactamases|CMY	@phgb|HQ650104|63-1209|ARO:3002076|CMY-63 [Citrobacter freundii]
Lahey	Bla|CMY-63|HQ650104|64-1209|1146|betalactams|Class_C_betalactamases|CMY	AET07387.1 HQ650104.1:64-1209
NCBI	Bla|CMY-63|HQ650104|64-1209|1146|betalactams|Class_C_betalactamases|CMY	gi|356457901|gb|HQ650104.1|64-1209
Resfinder	Bla|CMY-63|HQ650104|64-1209|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-63_1_HQ650104
CARD	Bla|KC964871.1|gene1|betalactams|Class_A_betalactamases|CTX	@phgb|KC964871|0-876|ARO:3001999|CTX-M-141 [Klebsiella pneumoniae]
Lahey	Bla|KC964871.1|gene1|betalactams|Class_A_betalactamases|CTX	AGN11769.1 KC964871.1:1-876
NCBI	Bla|KC964871.1|gene1|betalactams|Class_A_betalactamases|CTX	gi|508128869|gb|KC964871.1|1-876
NCBI	MLS|NC_023287.1.18156494|MLS|Macrolide_resistance_efflux_pumps|MEFA	gi|568818634|gb|KF648874.1|66509-65292
ARG-ANNOT	Bla|CTX-M-46|AY847147|82-957|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-46:AY847147:82-957:876
CARD	Bla|CTX-M-46|AY847147|82-957|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY847147|81-957|ARO:3001908|CTX-M-46 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-46|AY847147|82-957|876|betalactams|Class_A_betalactamases|CTX	AAV97956.1 AY847147.1:82-957
NCBI	Bla|CTX-M-46|AY847147|82-957|876|betalactams|Class_A_betalactamases|CTX	gi|56554770|gb|AY847147.1|82-957
Resfinder	Bla|CTX-M-46|AY847147|82-957|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-46_1_AY847147
ARG-ANNOT	Bla|CMY-79|JQ733576|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-79:JQ733576:1028-2173:1146
CARD	Bla|CMY-79|JQ733576|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ733576|1027-2173|ARO:3002092|CMY-79 [Citrobacter freundii]
Lahey	Bla|CMY-79|JQ733576|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	AFK73446.1 JQ733576.1:1028-2173
NCBI	Bla|CMY-79|JQ733576|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	gi|388564847|gb|JQ733576.1|1028-2173
Resfinder	Bla|CMY-79|JQ733576|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-79_1_JQ733576
NCBI	Sul|CP000675.2|gene3019|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|295647398|gb|CP001828.1|3262184-3261309 gi|225791049|gb|CP000675.2|3326709-3325834
NCBI	ACou|NC_006582.1.320275|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|56908016|dbj|AP006627.1|2103263-2101293 gi|361052061|gb|CP003179.1|6624-6652 gi|339284117|gb|CP002901.1|6384-6412
CARD	Bla|SHV-11_13_DQ219476|betalactams|Class_A_betalactamases|SHV	@phgb|X98101|73-934|ARO:3001070|SHV-11 [Klebsiella pneumoniae]
Lahey	Bla|SHV-11_13_DQ219476|betalactams|Class_A_betalactamases|SHV	CAA66729.1 X98101.1:74-934
NCBI	Bla|SHV-11_13_DQ219476|betalactams|Class_A_betalactamases|SHV	gi|77702551|gb|DQ219476.1|1-861 gi|2113850|emb|X98101.1|74-934
Resfinder	Bla|SHV-11_13_DQ219476|betalactams|Class_A_betalactamases|SHV	blaSHV-11_13_DQ219476
NCBI	Flq|NC_009641.5331984|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|941146344|gb|CP007676.1|7014-9695 gi|941142962|gb|CP007672.1|7014-9695 gi|941139768|gb|CP007657.1|7014-9695 gi|899756207|gb|CP012119.1|1918669-1915988 gi|828461663|gb|CP007674.1|7014-9695 gi|828444881|gb|CP007670.1|7014-9695 gi|640834542|gb|CP007690.1|7014-9695 gi|610395799|gb|CP007539.1|6471-9152 gi|160367075|gb|CP000730.1|7014-9695 gi|150373012|dbj|AP009351.1|6994-9675
ARG-ANNOT	Bla|CMY-41|AB429270|15-1160|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-41:AB429270:15-1160:1146
CARD	Bla|CMY-41|AB429270|15-1160|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AB429270|14-1160|ARO:3002052|CMY-41 [Citrobacter freundii]
Lahey	Bla|CMY-41|AB429270|15-1160|1146|betalactams|Class_C_betalactamases|CMY	BAG14343.1 AB429270.1:15-1160
NCBI	Bla|CMY-41|AB429270|15-1160|1146|betalactams|Class_C_betalactamases|CMY	gi|171362755|dbj|AB429270.1|15-1160
Resfinder	Bla|CMY-41|AB429270|15-1160|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-41_1_AB429270
ARG-ANNOT	Bla|OXA-208|FR853176|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-208:FR853176:1-825:825
CARD	Bla|OXA-208|FR853176|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|FR853176|0-825|ARO:3001486|OXA-208 [Acinetobacter baumannii]
Lahey	Bla|OXA-208|FR853176|1-825|825|betalactams|Class_D_betalactamases|OXA	CCA94644.1 FR853176.1:1-825
NCBI	Bla|OXA-208|FR853176|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|338221835|emb|FR853176.1|1-825
Resfinder	Bla|OXA-208|FR853176|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-208_1_FR853176
Lahey	Bla|OXA-51_3_EU255296|betalactams|Class_D_betalactamases|OXA	ABX45066.1 EU255296.1:1-825
NCBI	Bla|OXA-51_3_EU255296|betalactams|Class_D_betalactamases|OXA	gi|160623397|gb|EU255296.1|1-825
Resfinder	Bla|OXA-51_3_EU255296|betalactams|Class_D_betalactamases|OXA	blaOXA-51_3_EU255296
CARD	CARD|phgb|AF132290|87-948|ARO:3001076|SHV-18|betalactams|Class_A_betalactamases|SHV	@phgb|AF132290|87-948|ARO:3001076|SHV-18 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF132290|87-948|ARO:3001076|SHV-18|betalactams|Class_A_betalactamases|SHV	gi|7595230|gb|AF132290.1|AF132290|88-949 gi|195976046|gb|EU684753.1|1-861 gi|14532426|gb|AY036620.1|53-88
NCBI	Met|nimB_1_X71443|Metronidazole|nim_nitroimidazole_reductase|NIMB	gi|435260|emb|X71443.1|794-1288
Resfinder	Met|nimB_1_X71443|Metronidazole|nim_nitroimidazole_reductase|NIMB	nimB_1_X71443
CARD	CARD|phgb|AM982520|5548-6424|ARO:3001937|CTX-M-76|betalactams|Class_A_betalactamases|CTX	@phgb|AM982520|5548-6424|ARO:3001937|CTX-M-76 [Kluyvera ascorbata]
NCBI	CARD|phgb|AM982520|5548-6424|ARO:3001937|CTX-M-76|betalactams|Class_A_betalactamases|CTX	gi|193227719|emb|AM982520.1|5549-6425
NCBI	Flq|NC_012491.1.7720231|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|226092535|dbj|AP008955.1|3483238-3480695
CARD	CARD|phgb|AJ012256|208-1069|ARO:3000939|TEM-73|betalactams|Class_A_betalactamases|TEM	@phgb|AJ012256|208-1069|ARO:3000943|TEM-77 [Proteus mirabilis];@phgb|AJ012256|208-1069|ARO:3000939|TEM-73 [Proteus mirabilis]
NCBI	CARD|phgb|AJ012256|208-1069|ARO:3000939|TEM-73|betalactams|Class_A_betalactamases|TEM	gi|6688988|emb|AJ012256.1|209-1069
ARG-ANNOT	Bla|TEM-128|AY359287|186-1046|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-128:AY359287:186-1046:861
NCBI	Bla|TEM-128|AY359287|186-1046|861|betalactams|Class_A_betalactamases|TEM	gi|34099625|gb|AY359287.1|186-1046
Resfinder	Bla|TEM-128|AY359287|186-1046|861|betalactams|Class_A_betalactamases|TEM	blaTEM-128_1_AY359287
CARD	gi|54873595|gb|AY277255.2|betalactams|Class_A_betalactamases|SHV	@phgb|AY277255|66-927|ARO:3001089|SHV-31 [Klebsiella pneumoniae]
Lahey	gi|54873595|gb|AY277255.2|betalactams|Class_A_betalactamases|SHV	AAP33454.2 AY277255.2:67-927
NCBI	gi|54873595|gb|AY277255.2|betalactams|Class_A_betalactamases|SHV	gi|54873595|gb|AY277255.2|67-927
Resfinder	gi|54873595|gb|AY277255.2|betalactams|Class_A_betalactamases|SHV	blaSHV-31_2_AY277255
CARD	Bla|KF460531.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF460531|0-831|ARO:3001548|OXA-361 [Acinetobacter lwoffii]
Lahey	Bla|KF460531.1|gene1|betalactams|Class_D_betalactamases|OXA	AHA11124.1 KF460531.1:1-831
NCBI	Bla|KF460531.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|557477788|gb|KF460531.1|1-831
ARG-ANNOT	Bla|GES-21|JQ772478|141-1004|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-21:JQ772478:141-1004:864
CARD	Bla|GES-21|JQ772478|141-1004|864|betalactams|Class_A_betalactamases|GES	@phgb|JQ772478|140-1004|ARO:3002350|GES-21 [uncultured bacterium]
Lahey	Bla|GES-21|JQ772478|141-1004|864|betalactams|Class_A_betalactamases|GES	AFK80745.1 JQ772478.1:141-1004
NCBI	Bla|GES-21|JQ772478|141-1004|864|betalactams|Class_A_betalactamases|GES	gi|388891772|gb|JQ772479.1|141-1004 gi|388891770|gb|JQ772478.1|141-1004
Resfinder	Bla|GES-21|JQ772478|141-1004|864|betalactams|Class_A_betalactamases|GES	blaGES-21_1_JQ772478
NCBI	gi|6176541|gb|AF190692.1|betalactams|Class_A_betalactamases|TEM	gi|6176541|gb|AF190692.1|AF190692|1-1103
NCBI	Bla|OXA-56_1_EF437948|betalactams|Class_D_betalactamases|OXA	gi|126952402|gb|EF437948.1|1-794
ARG-ANNOT	Bla|CTX-M-130|JX017365|245-1120|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-130:JX017365:245-1120:876
CARD	Bla|CTX-M-130|JX017365|245-1120|876|betalactams|Class_A_betalactamases|CTX	@phgb|JX017365|244-1120|ARO:3001989|CTX-M-130 [Escherichia coli]
Lahey	Bla|CTX-M-130|JX017365|245-1120|876|betalactams|Class_A_betalactamases|CTX	AFJ59957.1 JX017365.1:245-1120
NCBI	Bla|CTX-M-130|JX017365|245-1120|876|betalactams|Class_A_betalactamases|CTX	gi|387165738|gb|JX017365.1|245-1120
Resfinder	Bla|CTX-M-130|JX017365|245-1120|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-130_1_JX017365
NCBI	Tet|tetW_6_FN396364|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	gi|260161304|emb|FN396364.1|3373-5292 gi|296182618|gb|CP002010.1|1457082-1457216
Resfinder	Tet|tetW_6_FN396364|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	tet(W)_6_FN396364
CARD	Phe|FJ460181.2|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	@phgb|FJ460181|1100-1733|ARO:3002680|catB8 [Aeromonas media]
NCBI	Phe|FJ460181.2|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|351214273|gb|FJ460181.2|1101-1733
ARG-ANNOT	Bla|LEN-2|AY037780|286-1125|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-2:AY037780:286-1125:861
CARD	Bla|LEN-2|AY037780|286-1125|861|betalactams|Class_A_betalactamases|LEN	@phgb|AY037780|88-949|ARO:3002455|LEN-2 [Klebsiella pneumoniae]
NCBI	Bla|LEN-2|AY037780|286-1125|861|betalactams|Class_A_betalactamases|LEN	gi|15721854|gb|AY037780.1|89-949
Resfinder	Bla|LEN-2|AY037780|286-1125|861|betalactams|Class_A_betalactamases|LEN	blaLEN2_1_AY037780
NCBI	Bla|SHV-11_9_FJ483937|betalactams|Class_A_betalactamases|SHV	gi|695214134|ref|NG_036739.1|1-861 gi|77702553|gb|DQ219477.1|1-861 gi|695198780|ref|NG_035078.1|451-1311
Resfinder	Bla|SHV-11_9_FJ483937|betalactams|Class_A_betalactamases|SHV	blaSHV-11_9_FJ483937
NCBI	Bla|CMY-60_1_HQ267531|betalactams|Class_C_betalactamases|CMY	gi|629511207|gb|KJ496347.1|160-1305 gi|326328196|gb|HQ267531.1|1-1146
Resfinder	Bla|CMY-60_1_HQ267531|betalactams|Class_C_betalactamases|CMY	blaCMY-60_1_HQ267531
CARD	gi|597709739|emb|HG934764.1|betalactams|Class_A_betalactamases|SHV	@phgb|HG934764|0-864|ARO:3001351|SHV-183 [Enterobacter cloacae]
Lahey	gi|597709739|emb|HG934764.1|betalactams|Class_A_betalactamases|SHV	CDN33427.1 HG934764.1:1-864
NCBI	gi|597709739|emb|HG934764.1|betalactams|Class_A_betalactamases|SHV	gi|597709739|emb|HG934764.1|1-864
ARG-ANNOT	gi|304359285|gb|HM559945.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-134:HM559945:1-861:861
CARD	gi|304359285|gb|HM559945.1|betalactams|Class_A_betalactamases|SHV	@phgb|HM559945|0-861|ARO:3001178|SHV-134 [Klebsiella pneumoniae]
Lahey	gi|304359285|gb|HM559945.1|betalactams|Class_A_betalactamases|SHV	ADM25824.1 HM559945.1:1-861
NCBI	gi|304359285|gb|HM559945.1|betalactams|Class_A_betalactamases|SHV	gi|304359285|gb|HM559945.1|1-861
Resfinder	gi|304359285|gb|HM559945.1|betalactams|Class_A_betalactamases|SHV	blaSHV-134_1_HM559945
CARD	Phe|X60827.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|X60827|87-735|ARO:3002670|cat [Staphylococcus aureus]
NCBI	Phe|X60827.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|695196531|ref|NG_034444.1|88-735
ARG-ANNOT	AGly|Aac6-Iaf|AB462903|1200-1751|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iaf:AB462903:1200-1751:552
CARD	AGly|Aac6-Iaf|AB462903|1200-1751|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AB462903|1199-1751|ARO:3002574|AAC(6')-Iaf [Pseudomonas aeruginosa]
NCBI	AGly|Aac6-Iaf|AB462903|1200-1751|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|238773819|dbj|AB462903.1|1200-1751
Resfinder	AGly|Aac6-Iaf|AB462903|1200-1751|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iaf_1_AB462903
ARG-ANNOT	Bla|CTX-M-12|AY293073|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-12:AY293073:1-876:876
CARD	Bla|CTX-M-12|AY293073|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AF305837|0-876|ARO:3001875|CTX-M-12 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-12|AY293073|1-876|876|betalactams|Class_A_betalactamases|CTX	AAG34108.1 AF305837.1:1-876
NCBI	Bla|CTX-M-12|AY293073|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|116257450|gb|DQ821704.2|1784-2659 gi|695211887|ref|NG_036283.1|1705-2580 gi|47087855|gb|AY571969.1|10-885 gi|31096325|gb|AY293073.1|1-876 gi|11321257|gb|AF305837.1|AF305837|1-876
Resfinder	Bla|CTX-M-12|AY293073|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-12_1_DQ821704
CARD	Rif|CP003248.2|gene696|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	@pvgb|AL123456|759806-763325|ARO:3003283|Mycobacterium tuberculosis rpoB mutants conferring resistance to rifampicin [Mycobacterium tuberculosis H37Rv]
NCBI	Rif|CP003248.2|gene696|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|984985728|gb|CP010338.1|763613-767131 gi|984981517|gb|CP010337.1|762303-765821 gi|984950177|gb|CP010330.1|759765-763283 gi|984945858|gb|CP010329.1|759740-763258 gi|749193065|gb|CP007027.1|759810-763328 gi|737516150|dbj|AP014573.1|763909-767427 gi|690310687|gb|CP009480.1|759213-762731 gi|559794742|gb|CP003248.2|759810-763328 gi|444893469|emb|AL123456.3|759807-763325 gi|378543272|emb|HE608151.1|761752-765270
CARD	AGly|AM087405.1|gene3|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AM087405|1748-2582|ARO:3002622|aadA6/aadA10 [Pseudomonas aeruginosa]
NCBI	AGly|AM087405.1|gene3|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|339279223|emb|FR875294.1|668-1501 gi|165971784|emb|AM932674.1|675-1508 gi|695200944|ref|NG_036214.1|1749-2582 gi|215262430|emb|FM877480.1|680-1511 gi|166034465|gb|EU358785.1|1519-2347 gi|962148162|gb|KT345947.1|22223-23028
ARG-ANNOT	Bla|TEM-144|DQ256080|215-1075|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-144:DQ256080:215-1075:861
NCBI	Bla|TEM-144|DQ256080|215-1075|861|betalactams|Class_A_betalactamases|TEM	gi|82395023|gb|DQ256080.1|215-1075
Resfinder	Bla|TEM-144|DQ256080|215-1075|861|betalactams|Class_A_betalactamases|TEM	blaTEM-144_1_DQ256080
CARD	Bla|NC_009487.5167689|betalactams|Penicillin_binding_protein|MECA	@phgb|NC_009487|40848-42606|ARO:3000215|mecR1 [Staphylococcus aureus subsp. aureus JH9]
NCBI	Bla|NC_009487.5167689|betalactams|Penicillin_binding_protein|MECA	gi|974697948|dbj|AP017320.1|46137-47894 gi|803444476|gb|CP011147.1|40617-42374 gi|311222926|gb|CP001844.2|46140-47897 gi|149944932|gb|CP000736.1|40918-42675 gi|147739516|gb|CP000703.1|40849-42606 gi|2791983|emb|Y14051.1|3372-1615 gi|295157|gb|L14020.1|STAMECR|110-1867
CARD	Tet|ortB_1_AF079900|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|OTRB	@phgb|AF079900|39-1731|ARO:3002892|otrB [Streptomyces rimosus]
NCBI	Tet|ortB_1_AF079900|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|OTRB	gi|3617953|gb|AF079900.1|AF079900|40-1731 gi|3108176|gb|AF061335.1|AF061335|1-1611
Resfinder	Tet|ortB_1_AF079900|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|OTRB	ort(B)_1_AF079900
ARG-ANNOT	Bla|SHV2A-kp|X62115|1281-2141|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV2A-kp:X62115:1281-2141:861
NCBI	Bla|SHV2A-kp|X62115|1281-2141|861|betalactams|Class_A_betalactamases|SHV	gi|695196628|ref|NG_034478.1|1281-2141
CARD	CARD|phgb|NC_007779|1115840-1117067|ARO:3001329|mdtG|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTG	@phgb|NC_007779|1115840-1117067|ARO:3001329|mdtG [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|NC_007779|1115840-1117067|ARO:3001329|mdtG|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTG	gi|985000614|gb|CP014225.1|3953188-3954415 gi|958627747|gb|CP013253.1|2349440-2348213 gi|958612453|gb|CP013048.1|3091659-3090432 gi|939732440|gb|CP011343.2|1112561-1113788 gi|939731527|gb|CP011342.2|1113070-1114297 gi|937526251|gb|CP012870.1|3527411-3526184 gi|937521852|gb|CP012869.1|3527412-3526185 gi|937517453|gb|CP012868.1|3527401-3526174 gi|932857508|emb|LN877770.1|1495350-1496577 gi|899729770|gb|CP012127.1|1090397-1091624
CARD	CARD|phgb|U00096|3203309-3204131|ARO:3002986|bacA|Bacitracin|Undecaprenyl_pyrophosphate_phosphatase|BACA	@phgb|U00096|3203309-3204131|ARO:3002986|bacA [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|3203309-3204131|ARO:3002986|bacA|Bacitracin|Undecaprenyl_pyrophosphate_phosphatase|BACA	gi|985000614|gb|CP014225.1|1400510-1401332 gi|974145171|gb|CP007491.1|3299187-3300009 gi|958627747|gb|CP013253.1|220023-219201 gi|939732440|gb|CP011343.2|3178382-3179204 gi|939731527|gb|CP011342.2|3179127-3179949 gi|937526251|gb|CP012870.1|1438346-1437524 gi|937521852|gb|CP012869.1|1438346-1437524 gi|937517453|gb|CP012868.1|1438346-1437524 gi|932857508|emb|LN877770.1|4027477-4028299 gi|923416119|gb|CP011113.1|3160028-3160850
CARD	Bla|OXA-254_1_AB781687|betalactams|Class_D_betalactamases|OXA	@phgb|AB781687|0-825|ARO:3001682|OXA-254 [Acinetobacter baumannii]
Lahey	Bla|OXA-254_1_AB781687|betalactams|Class_D_betalactamases|OXA	BAN10684.1 AB781687.1:1-825
NCBI	Bla|OXA-254_1_AB781687|betalactams|Class_D_betalactamases|OXA	gi|474426958|dbj|AB781687.1|1-825
Resfinder	Bla|OXA-254_1_AB781687|betalactams|Class_D_betalactamases|OXA	blaOXA-254_1_AB781687
CARD	CARD|phgb|X95635|259-1663|ARO:3000812|mtrE|Multi-drug_resistance|Multi-drug_efflux_pumps|MTRE	@phgb|X95635|259-1663|ARO:3000812|mtrE [Neisseria gonorrhoeae]
NCBI	CARD|phgb|X95635|259-1663|ARO:3000812|mtrE|Multi-drug_resistance|Multi-drug_efflux_pumps|MTRE	gi|2276340|emb|X95635.1|260-1664
NCBI	gi|784887|gb|L07945.1|PSEBLAOXA3|betalactams|Class_D_betalactamases|OXA	gi|784887|gb|L07945.1|PSEBLAOXA3|1-900
CARD	CARD|phgb|EU342351|172-1033|ARO:3001118|SHV-63|betalactams|Class_A_betalactamases|SHV	@phgb|EU342351|172-1033|ARO:3001118|SHV-63 [Klebsiella pneumoniae]
NCBI	CARD|phgb|EU342351|172-1033|ARO:3001118|SHV-63|betalactams|Class_A_betalactamases|SHV	gi|815976342|gb|CP011313.1|2734371-2735232 gi|164449661|gb|EU342351.1|173-1034
CARD	CARD|pvgb|AL123456|4407527-4408202|ARO:3003470|Mycobacterium|Aminoglycosides|Aminoglycoside-resistant_gidB|GIDB|RequiresSNPConfirmation	@pvgb|AL123456|4407527-4408202|ARO:3003470|Mycobacterium tuberculosis gidB mutation conferring resistance to streptomycin [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|4407527-4408202|ARO:3003470|Mycobacterium|Aminoglycosides|Aminoglycoside-resistant_gidB|GIDB|RequiresSNPConfirmation	gi|984985728|gb|CP010338.1|4413086-4413761 gi|984981517|gb|CP010337.1|4397825-4398500 gi|984950177|gb|CP010330.1|4417899-4418574 gi|984945858|gb|CP010329.1|4424617-4425292 gi|749193065|gb|CP007027.1|4406907-4407582 gi|737516150|dbj|AP014573.1|4411074-4411749 gi|559794742|gb|CP003248.2|4407705-4408380 gi|542043551|gb|CP001664.1|4404321-4404996 gi|444893469|emb|AL123456.3|4407528-4408203 gi|440579446|emb|HE663067.1|4417193-4417868
NCBI	Bla|ampS_1_X80276|betalactams|Class_D_betalactamases|OXA	gi|117558854|gb|CP000462.1|4713960-4714754 gi|1072324|emb|X80276.1|1-795
Resfinder	Bla|ampS_1_X80276|betalactams|Class_D_betalactamases|OXA	ampS_1_X80276
ARG-ANNOT	Bla|OXA-83|DQ309277|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-83:DQ309277:1-825:825
CARD	Bla|OXA-83|DQ309277|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|DQ309277|0-825|ARO:3001623|OXA-83 [Acinetobacter baumannii]
Lahey	Bla|OXA-83|DQ309277|1-825|825|betalactams|Class_D_betalactamases|OXA	ABC26007.1 DQ309277.1:1-825
NCBI	Bla|OXA-83|DQ309277|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|83628253|gb|DQ309277.1|1-825
Resfinder	Bla|OXA-83|DQ309277|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-83_1_DQ309277
ARG-ANNOT	Bla|cfxA|U38243|150-1115|966|betalactams|Class_A_betalactamases|CFX	(Bla)cfxA:U38243:150-1115:966;(Bla)cfxA3:U75371:8234-9199:966
CARD	Bla|cfxA|U38243|150-1115|966|betalactams|Class_A_betalactamases|CFX	@phgb|U38243|149-1115|ARO:3003001|CfxA [Bacteroides vulgatus]
NCBI	Bla|cfxA|U38243|150-1115|966|betalactams|Class_A_betalactamases|CFX	gi|669206843|gb|KF498961.1|6858-7823 gi|5566608|gb|U75371.3|BFU75371|9199-8234 gi|1079657|gb|U38243.1|BVU38243|150-1115
Resfinder	Bla|cfxA|U38243|150-1115|966|betalactams|Class_A_betalactamases|CFX	cfxA_1_U38243
CARD	gi|757399505|gb|KP050485.1|betalactams|Class_D_betalactamases|OXA	@phgb|KP050485|0-822|ARO:3001553|OXA-366 [Acinetobacter baumannii]
Lahey	gi|757399505|gb|KP050485.1|betalactams|Class_D_betalactamases|OXA	AJO16038.1 KP050485.1:1-822
NCBI	gi|757399505|gb|KP050485.1|betalactams|Class_D_betalactamases|OXA	gi|757399505|gb|KP050485.1|1-822
NCBI	Mdr|NC_002758.1121390|Multi-drug_resistance|MDR_regulator|ARLR	gi|984671414|emb|LT009690.1|1469141-1468482 gi|974161314|gb|CP012018.1|1533436-1532777 gi|974158397|gb|CP012015.1|1534172-1533513 gi|974155539|gb|CP012013.1|1535085-1534426 gi|974152716|gb|CP012012.1|1526966-1526307 gi|974149849|gb|CP012011.1|1582920-1582261 gi|941146344|gb|CP007676.1|1426316-1425657 gi|941142962|gb|CP007672.1|1424705-1424046 gi|941139768|gb|CP007657.1|1438417-1437758 gi|930584899|dbj|AP014942.1|1416197-1415538
ARG-ANNOT	Bla|SHV-6|Y11069|1-780|780|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-6:Y11069:1-780:780
CARD	Bla|SHV-6|Y11069|1-780|780|betalactams|Class_A_betalactamases|SHV	@phgb|Y11069|0-780|ARO:3001065|SHV-6 [Klebsiella pneumoniae]
NCBI	Bla|SHV-6|Y11069|1-780|780|betalactams|Class_A_betalactamases|SHV	gi|1841439|emb|Y11069.1|1-780
ARG-ANNOT	AGly|Aph3-dprime-Ia|FJ172370|38668-39483|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	(AGly)Aph3''Ia:FJ172370:38668-39483:816
NCBI	AGly|Aph3-dprime-Ia|FJ172370|38668-39483|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|973585379|gb|KP054476.2|64822-64007 gi|969982025|gb|KT317084.1|67-882 gi|969982003|gb|KT317083.1|67-882 gi|969981973|gb|KT317082.1|67-882 gi|944398239|gb|CP013025.1|2340086-2340901 gi|909010439|gb|JN247441.4|85110-85925 gi|828959694|gb|CP011636.1|3725338-3726153 gi|827403829|gb|CP010779.1|2709935-2710750 gi|817614502|gb|KF483599.2|73488-72673 gi|817554816|gb|GQ406245.5|38673-37858
Resfinder	AGly|Aph3-dprime-Ia|FJ172370|38668-39483|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	aph(3')-Ic_1_X62115
CARD	MLS|ermB_15U48430|MLS|23S_rRNA_methyltransferases|ERMB	@phgb|U48430|406-1159|ARO:3000375|ErmB [Lactobacillus fermentum]
NCBI	MLS|ermB_15U48430|MLS|23S_rRNA_methyltransferases|ERMB	gi|19918892|gb|AY082384.1|247-999 gi|27656764|gb|AF205068.1|407-1159 gi|695197482|ref|NG_034736.1|407-1159
Resfinder	MLS|ermB_15U48430|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_15_U48430
NCBI	gi|591389141|gb|KF986253.1|betalactams|Class_D_betalactamases|OXA	gi|591389141|gb|KF986253.1|1-856
ARG-ANNOT	AGly|RmtD|DQ914960|9632-8889|744|Aminoglycosides|16S_rRNA_methyltransferases|RMTD	(AGly)RmtD:DQ914960:9632-8889:744
NCBI	AGly|RmtD|DQ914960|9632-8889|744|Aminoglycosides|16S_rRNA_methyltransferases|RMTD	gi|970697516|gb|KT935445.1|39422-40165 gi|970697516|gb|KT935445.1|46021-46764 gi|937559777|gb|KT454971.1|363204-363947 gi|695213116|ref|NG_036550.1|2223-1480 gi|164521141|gb|DQ914960.2|9632-8889 gi|469761626|gb|KC593856.1|1-491 gi|323099809|gb|HQ876773.1|1-423
ARG-ANNOT	Bla|OXY2-1|AJ871866|1-873|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-1:AJ871866:1-873:873
CARD	Bla|OXY2-1|AJ871866|1-873|873|betalactams|Class_A_betalactamases|OXY	@phgb|AJ871866|0-873|ARO:3002396|OXY-2-1 [Klebsiella oxytoca]
NCBI	Bla|OXY2-1|AJ871866|1-873|873|betalactams|Class_A_betalactamases|OXY	gi|60416698|emb|AJ871866.1|1-873
Resfinder	Bla|OXY2-1|AJ871866|1-873|873|betalactams|Class_A_betalactamases|OXY	blaOXY-2-1_1_AJ871866
NCBI	Rif|NC_003098.1.933647|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|25307955|gb|AE007317.1|1751671-1748021 gi|116075884|gb|CP000410.1|1759203-1755553
ARG-ANNOT	Bla|SHV-82|AM176557|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-82:AM176557:1-861:861
CARD	Bla|SHV-82|AM176557|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176557|0-861|ARO:3001136|SHV-82 [Klebsiella pneumoniae]
Lahey	Bla|SHV-82|AM176557|1-861|861|betalactams|Class_A_betalactamases|SHV	CAJ47137.2 AM176557.2:1-861
NCBI	Bla|SHV-82|AM176557|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|160948458|emb|AM176557.2|1-861
Resfinder	Bla|SHV-82|AM176557|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-82_1_AM176557
CARD	545|L25617.1|PSEAACDINT|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|KC543497.1|404932-405451|ARO:3002548|AAC(6')-IId [Pseudomonas aeruginosa PA96]
NCBI	545|L25617.1|PSEAACDINT|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|974751547|gb|KU130294.1|207886-207368 gi|971493847|gb|CP010351.1|169759-170277 gi|962148162|gb|KT345947.1|21635-22153 gi|953357758|gb|KT290957.1|1219-1737 gi|953357751|gb|KT290956.1|1703-2221 gi|953357745|gb|KT290955.1|1219-1737 gi|953357739|gb|KT290954.1|1219-1737 gi|953357733|gb|KT290953.1|1219-1737 gi|953357725|gb|KT290952.1|1219-1737 gi|953357719|gb|KT290951.1|1219-1737
ARG-ANNOT	Bla|CTX-M-80|EU202673|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-80:EU202673:1-876:876
CARD	Bla|CTX-M-80|EU202673|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|EU202673|0-876|ARO:3001941|CTX-M-80 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-80|EU202673|1-876|876|betalactams|Class_A_betalactamases|CTX	ABW86620.2 EU202673.2:1-876
NCBI	Bla|CTX-M-80|EU202673|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|195975932|gb|EU202673.2|1-876
Resfinder	Bla|CTX-M-80|EU202673|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-80_1_EU202673
ARG-ANNOT	1293|HM750249.1|HM750249|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-25:HM750249:91-891:801
CARD	1293|HM750249.1|HM750249|betalactams|Class_B_betalactamases|VIM	@phgb|HM750249|90-891|ARO:3002295|VIM-25 [Proteus mirabilis]
Lahey	1293|HM750249.1|HM750249|betalactams|Class_B_betalactamases|VIM	ADO50679.1 HM750249.1:91-891
NCBI	1293|HM750249.1|HM750249|betalactams|Class_B_betalactamases|VIM	gi|970567963|dbj|LC107421.1|79-879 gi|308746072|gb|HM750249.1|91-891
Resfinder	1293|HM750249.1|HM750249|betalactams|Class_B_betalactamases|VIM	blaVIM-25_1_HM750249
ARG-ANNOT	Tet|Tet-32|DQ647324|181-2100|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET32	(Tet)Tet-32:DQ647324:181-2100:1920
NCBI	Tet|Tet-32|DQ647324|181-2100|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET32	gi|857123493|gb|CP011226.1|396709-394790 gi|857121787|gb|CP011225.1|1636152-1638071 gi|857120193|gb|CP011224.1|398718-396799 gi|857118485|gb|CP011223.1|397284-395365 gi|857116689|gb|CP011222.1|399141-397222 gi|537626389|gb|CP003840.1|1277470-1275551 gi|537624632|gb|CP003800.1|1277241-1275322 gi|356668635|gb|JN086173.1|440-2359 gi|350278064|gb|CP003058.1|703303-705222 gi|194268334|gb|EF626942.1|839-2758
Resfinder	Tet|Tet-32|DQ647324|181-2100|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET32	tet(32)_2_EF626943
NCBI	Tet|tetC_1_NC_002109|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	gi|961454907|gb|KT991389.1|1319-129 gi|961454907|gb|KT991389.1|3654-3683 gi|627769342|gb|KF195927.1|6879-5689 gi|669174522|dbj|AB775653.1|58-1248 gi|507466429|dbj|AB777650.1|496-1686 gi|507466429|dbj|AB777650.1|2190-2283 gi|507466429|dbj|AB777650.1|2337-2280 gi|507466420|dbj|AB777647.1|2256-1066 gi|507466420|dbj|AB777647.1|562-469 gi|507466420|dbj|AB777647.1|415-472 gi|496543269|gb|KC820641.1|3902-5092 gi|496543253|gb|KC820640.1|3901-5091 gi|448967488|gb|KC562906.1|5363-6553 gi|358444205|gb|JN381160.1|86-1276 gi|325965637|gb|JF420888.1|8876-7686 gi|325965637|gb|JF420888.1|6585-6555
ARG-ANNOT	1218|FJ820124.1|FJ820124|betalactams|Class_A_betalactamases|GES	(Bla)GES-10:FJ820124:1124-1987:864
CARD	1218|FJ820124.1|FJ820124|betalactams|Class_A_betalactamases|GES	@phgb|FJ820124|1123-1987|ARO:3002339|GES-10 [uncultured bacterium]
Lahey	1218|FJ820124.1|FJ820124|betalactams|Class_A_betalactamases|GES	ACS73598.1 FJ820124.1:1124-1987
NCBI	1218|FJ820124.1|FJ820124|betalactams|Class_A_betalactamases|GES	gi|241992518|gb|FJ820124.1|1124-1987
Resfinder	1218|FJ820124.1|FJ820124|betalactams|Class_A_betalactamases|GES	blaGES-10_1_FJ820124
NCBI	Bla|AF118110.1|gene1|betalactams|Class_A_betalactamases|CFX	gi|4566898|gb|AF118110.1|AF118110|1037-72 gi|209570233|emb|AM940013.1|1-921
Lahey	Bla|OXA-51_8_EU255291|betalactams|Class_D_betalactamases|OXA	ABX45061.1 EU255291.1:1-825
NCBI	Bla|OXA-51_8_EU255291|betalactams|Class_D_betalactamases|OXA	gi|160623387|gb|EU255291.1|1-825
Resfinder	Bla|OXA-51_8_EU255291|betalactams|Class_D_betalactamases|OXA	blaOXA-51_8_EU255291
ARG-ANNOT	Bla|B-5|AF189303|1-750|750|betalactams|Class_B_betalactamases|BLAB	(Bla)B-5:AF189303:1-750:750
NCBI	Bla|B-5|AF189303|1-750|750|betalactams|Class_B_betalactamases|BLAB	gi|9587065|gb|AF189303.1|AF189303|1-750
Resfinder	Bla|B-5|AF189303|1-750|750|betalactams|Class_B_betalactamases|BLAB	blaB-5_1_AF189303
NCBI	ACou|NC_003112.2.903425|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|66731897|gb|AE002098.2|1759876-1757891
CARD	44|AY768532.1|AY768532|MLS|Macrolide_resistance_efflux_pumps|MACB	@phgb|AY768532|0-1935|ARO:3000535|macB [Neisseria gonorrhoeae]
NCBI	44|AY768532.1|AY768532|MLS|Macrolide_resistance_efflux_pumps|MACB	gi|56385101|gb|AY768532.1|1-1935
CARD	Tet|tetG_2_AF133139|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	@phgb|AF133139|0-1176|ARO:3000174|tetG [Pseudomonas sp.]
NCBI	Tet|tetG_2_AF133139|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	gi|695199026|ref|NG_035147.1|1104-2279
Resfinder	Tet|tetG_2_AF133139|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	tet(G)_2_AF133139
NCBI	616|HQ875016.1|HQ875016|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|973585379|gb|KP054476.2|51842-52633 gi|971338783|gb|CP006659.2|2297685-2298476 gi|966344239|gb|KT291741.1|92-883 gi|957657109|dbj|LC099465.1|45-836 gi|953007066|gb|CP013143.1|6-797 gi|937637492|gb|KT334335.1|96763-95972 gi|928083869|gb|CP012682.1|73669-72878 gi|923091304|gb|KP942843.1|120-911 gi|918400318|dbj|AP014939.1|110915-111706 gi|908266278|gb|CP012170.1|134703-133912
NCBI	Sul|CP004022.1|gene3451|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|529186758|gb|CP004022.1|3736140-3736982
ARG-ANNOT	Bla|TEM-28|ECU37195|76-936|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-28:ECU37195:76-936:861
CARD	Bla|TEM-28|ECU37195|76-936|861|betalactams|Class_A_betalactamases|TEM	@phgb|U37195|75-936|ARO:3000898|TEM-28 [Escherichia coli]
Lahey	Bla|TEM-28|ECU37195|76-936|861|betalactams|Class_A_betalactamases|TEM	AAC32891.1 U37195.1:76-936
NCBI	Bla|TEM-28|ECU37195|76-936|861|betalactams|Class_A_betalactamases|TEM	gi|1045658|gb|U37195.1|ECU37195|76-936
Resfinder	Bla|TEM-28|ECU37195|76-936|861|betalactams|Class_A_betalactamases|TEM	blaTEM-28_1_ECU37195
NCBI	gi|257359514|gb|GQ428198.1|betalactams|Class_A_betalactamases|SHV	gi|257359514|gb|GQ428198.1|48-986
ARG-ANNOT	Bla|PBP|Ecoli|CP002291|664439-666340|1902|betalactams|Penicillin_binding_protein|PBP2	(Bla)Penicillin_Binding_Protein_Ecoli:CP002291:664439-666340:1902
NCBI	Bla|PBP|Ecoli|CP002291|664439-666340|1902|betalactams|Penicillin_binding_protein|PBP2	gi|985000614|gb|CP014225.1|3506958-3505057 gi|958627747|gb|CP013253.1|2795888-2797789 gi|939732440|gb|CP011343.2|666541-664640 gi|939731527|gb|CP011342.2|667006-665105 gi|937526251|gb|CP012870.1|3973458-3975359 gi|937521852|gb|CP012869.1|3973459-3975360 gi|937517453|gb|CP012868.1|3973448-3975349 gi|932857508|emb|LN877770.1|1046935-1045034 gi|923416119|gb|CP011113.1|651605-649704 gi|899729770|gb|CP012127.1|657216-655315
NCBI	gi|442540408|gb|JX514368.1|betalactams|Class_C_betalactamases|CMY	gi|442540408|gb|JX514368.1|272-1448
ARG-ANNOT	Bla|MOX-7|GQ152602|1-1152|1152|betalactams|Class_C_betalactamases|MOX	(Bla)MOX-7:GQ152602:1-1152:1152
CARD	Bla|MOX-7|GQ152602|1-1152|1152|betalactams|Class_C_betalactamases|MOX	@phgb|GQ152602|0-1152|ARO:3002189|MOX-7 [Aeromonas caviae]
Lahey	Bla|MOX-7|GQ152602|1-1152|1152|betalactams|Class_C_betalactamases|MOX	ACS44785.1 GQ152602.1:1-1152
NCBI	Bla|MOX-7|GQ152602|1-1152|1152|betalactams|Class_C_betalactamases|MOX	gi|240129549|gb|GQ152602.1|1-1152
Resfinder	Bla|MOX-7|GQ152602|1-1152|1152|betalactams|Class_C_betalactamases|MOX	blaMOX-7_1_GQ152602
CARD	CARD|phgb|NC_003112|1791966-1795170|ARO:3000811|mtrD|Multi-drug_resistance|Multi-drug_efflux_pumps|MTRD	@phgb|NC_003112|1791966-1795170|ARO:3000811|mtrD [Neisseria meningitidis MC58]
NCBI	CARD|phgb|NC_003112|1791966-1795170|ARO:3000811|mtrD|Multi-drug_resistance|Multi-drug_efflux_pumps|MTRD	gi|744797373|gb|CP006869.1|1799228-1796024 gi|325199235|gb|CP002420.1|539286-536082 gi|66731897|gb|AE002098.2|1791967-1795171
NCBI	Bla|AJ511268.1|gene2|betalactams|Class_B_betalactamases|VIM	gi|30141364|emb|AJ511268.1|397-1197
NCBI	gi|94960148|gb|DQ519087.1|betalactams|Class_D_betalactamases|OXA	gi|94960148|gb|DQ519087.1|1-890
ARG-ANNOT	Bla|GES-18|JQ028729|1-864|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-18:JQ028729:1-864:864
CARD	Bla|GES-18|JQ028729|1-864|864|betalactams|Class_A_betalactamases|GES	@phgb|JQ028729|0-864|ARO:3002347|GES-18 [Pseudomonas aeruginosa]
Lahey	Bla|GES-18|JQ028729|1-864|864|betalactams|Class_A_betalactamases|GES	AEX59144.1 JQ028729.1:1-864
NCBI	Bla|GES-18|JQ028729|1-864|864|betalactams|Class_A_betalactamases|GES	gi|371928988|gb|JQ028729.1|1-864
Resfinder	Bla|GES-18|JQ028729|1-864|864|betalactams|Class_A_betalactamases|GES	blaGES-18_1_JQ028729
ARG-ANNOT	Flq|QnrB30|HM439650|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB30:HM439650:37-681:645
CARD	Flq|QnrB30|HM439650|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HM439650|0-681|ARO:3002745|QnrB30 [Citrobacter braakii]
NCBI	Flq|QnrB30|HM439650|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224421|ref|NG_041072.1|1-681
Resfinder	Flq|QnrB30|HM439650|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB30_1_HM439650
ARG-ANNOT	Bla|TEM-120|AY243512|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-120:AY243512:209-1069:861
CARD	Bla|TEM-120|AY243512|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY243512|208-1069|ARO:3000982|TEM-120 [Klebsiella oxytoca]
Lahey	Bla|TEM-120|AY243512|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAO85882.1 AY243512.1:209-1069
NCBI	Bla|TEM-120|AY243512|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|29650763|gb|AY243512.1|209-1069
Resfinder	Bla|TEM-120|AY243512|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-120_1_AY243512
NCBI	Rif|NC_007793.3914836|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|941146344|gb|CP007676.1|556300-559851 gi|941139768|gb|CP007657.1|581509-585060 gi|899756207|gb|CP012119.1|1337395-1333844 gi|899750970|gb|CP012120.1|356992-353441 gi|828461663|gb|CP007674.1|564583-568134 gi|828444881|gb|CP007670.1|594323-597874 gi|743649775|gb|CP010300.1|585554-589105 gi|743624649|gb|CP010299.1|585554-589105 gi|743618732|gb|CP010298.1|585553-589104 gi|743615870|gb|CP010297.1|585554-589105
NCBI	Bla|Y18050.2|gene3|betalactams|Class_B_betalactamases|VIM	gi|941350200|gb|KT345946.1|25770-26689 gi|930190865|emb|LN555650.1|262051-261132 gi|930189590|emb|HG530658.1|197759-196840 gi|887516996|gb|KR338351.1|1151-2070 gi|825088700|gb|KP975077.1|107369-106450 gi|821393026|gb|KP873172.1|23993-23074 gi|821392896|gb|KP873171.1|22025-21106 gi|821392896|gb|KP873171.1|20472-19556 gi|821392896|gb|KP873171.1|19558-18713 gi|768032361|gb|KM975294.1|566-1485 gi|768032333|gb|KM514484.1|566-1485 gi|742797756|emb|LK054503.1|12302-13221
ARG-ANNOT	Bla|TEM-143|DQ075245|218-1078|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-143:DQ075245:218-1078:861
CARD	Bla|TEM-143|DQ075245|218-1078|861|betalactams|Class_A_betalactamases|TEM	@phgb|DQ075245|217-1078|ARO:3001006|TEM-143 [Escherichia coli]
Lahey	Bla|TEM-143|DQ075245|218-1078|861|betalactams|Class_A_betalactamases|TEM	AAY85632.1 DQ075245.1:218-1078
NCBI	Bla|TEM-143|DQ075245|218-1078|861|betalactams|Class_A_betalactamases|TEM	gi|378762514|gb|JQ416149.1|1-861 gi|68137405|gb|DQ075245.1|218-1078
Resfinder	Bla|TEM-143|DQ075245|218-1078|861|betalactams|Class_A_betalactamases|TEM	blaTEM-143_1_DQ075245
NCBI	Bla|CTX-M-11_1_AJ310929|betalactams|Class_A_betalactamases|CTX	gi|20145491|emb|AJ310929.1|244-1119
Resfinder	Bla|CTX-M-11_1_AJ310929|betalactams|Class_A_betalactamases|CTX	blaCTX-M-11_1_AJ310929
ARG-ANNOT	Bla|cfiA14|FM200789|162-911|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA14:FM200789:162-911:750
NCBI	Bla|cfiA14|FM200789|162-911|750|betalactams|Class_B_betalactamases|CFIA	gi|238908267|emb|FM200789.1|162-911
Resfinder	Bla|cfiA14|FM200789|162-911|750|betalactams|Class_B_betalactamases|CFIA	cfiA14_1_FM200789
ARG-ANNOT	Bla|ACC-3|AF180957|1-1131|1131|betalactams|Class_C_betalactamases|ACC	(Bla)ACC-3:AF180957:1-1131:1131
CARD	Bla|ACC-3|AF180957|1-1131|1131|betalactams|Class_C_betalactamases|ACC	@phgb|AF180958|0-1131|ARO:3001817|ACC-3 [Hafnia alvei]
NCBI	Bla|ACC-3|AF180957|1-1131|1131|betalactams|Class_C_betalactamases|ACC	gi|9294825|gb|AF180957.1|1-1131
Resfinder	Bla|ACC-3|AF180957|1-1131|1131|betalactams|Class_C_betalactamases|ACC	blaACC-3_1_AF180958
ARG-ANNOT	Bla|OCH-7|AJ295345|1-1173|1173|betalactams|Class_C_betalactamases|OCH	(Bla)OCH-7:AJ295345:1-1173:1173
CARD	Bla|OCH-7|AJ295345|1-1173|1173|betalactams|Class_C_betalactamases|OCH	@phgb|AJ295345|0-1173|ARO:3002520|OCH-7 [Ochrobactrum anthropi]
NCBI	Bla|OCH-7|AJ295345|1-1173|1173|betalactams|Class_C_betalactamases|OCH	gi|11544708|emb|AJ295345.1|1-1173 gi|402496289|gb|JX009239.1|437-408
Resfinder	Bla|OCH-7|AJ295345|1-1173|1173|betalactams|Class_C_betalactamases|OCH	blaOCH-7_1_AJ295345
NCBI	Bla|LEN-9_1_AJ635405|betalactams|Class_A_betalactamases|LEN	gi|46309185|emb|AJ635405.1|1-789
Resfinder	Bla|LEN-9_1_AJ635405|betalactams|Class_A_betalactamases|LEN	blaLEN9_1_AJ635405
ARG-ANNOT	Bla|SHV-69|DQ174308|5-865|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-69:DQ174308:5-865:861
CARD	Bla|SHV-69|DQ174308|5-865|861|betalactams|Class_A_betalactamases|SHV	@phgb|DQ174308|4-865|ARO:3001123|SHV-69 [Klebsiella pneumoniae]
Lahey	Bla|SHV-69|DQ174308|5-865|861|betalactams|Class_A_betalactamases|SHV	ABA06590.1 DQ174308.1:5-865
NCBI	Bla|SHV-69|DQ174308|5-865|861|betalactams|Class_A_betalactamases|SHV	gi|74422858|gb|DQ174308.1|5-865
Resfinder	Bla|SHV-69|DQ174308|5-865|861|betalactams|Class_A_betalactamases|SHV	blaSHV-69_1_DQ174308
ARG-ANNOT	Bla|SHV-57|AY223863|171-1031|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-57:AY223863:171-1031:861
CARD	Bla|SHV-57|AY223863|171-1031|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY223863|170-1031|ARO:3001113|SHV-57 [Escherichia coli]
Lahey	Bla|SHV-57|AY223863|171-1031|861|betalactams|Class_A_betalactamases|SHV	AAO66446.1 AY223863.1:171-1031
NCBI	Bla|SHV-57|AY223863|171-1031|861|betalactams|Class_A_betalactamases|SHV	gi|695209363|ref|NG_035807.1|171-1031
Resfinder	Bla|SHV-57|AY223863|171-1031|861|betalactams|Class_A_betalactamases|SHV	blaSHV-57_1_AY223863
NCBI	MLS|ereA_4_AF512546|MLS|Macrolide_esterases|EREA	gi|21263078|gb|AF512546.1|716-1942 gi|954629879|gb|CP013215.1|280834-280647 gi|948288909|gb|KR259328.1|932-1119 gi|908266278|gb|CP012170.1|140874-141061 gi|659224503|gb|KJ668707.1|918-1105
Resfinder	MLS|ereA_4_AF512546|MLS|Macrolide_esterases|EREA	ere(A)_4_AF512546
ARG-ANNOT	Sul|SulI|AF071413|6700-7539|840|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	(Sul)SulI:AF071413:6700-7539:840
CARD	Sul|SulI|AF071413|6700-7539|840|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	@phgb|JF969163|1053-1893|ARO:3000410|sul1 [Vibrio fluvialis]
NCBI	Sul|SulI|AF071413|6700-7539|840|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|984881271|gb|CP014215.1|2292203-2291364 gi|984881271|gb|CP014215.1|2304967-2304128 gi|970698242|gb|KT988020.1|22635-23474 gi|970698221|gb|KT988019.1|7447-8286 gi|970698093|gb|KT988018.1|115121-115960 gi|982189197|gb|CP013993.1|5424788-5425627 gi|982189197|gb|CP013993.1|5430539-5431065 gi|974752094|gb|KT164809.1|5954-5115 gi|974751547|gb|KU130294.1|238652-237813 gi|974751547|gb|KU130294.1|233473-234001 gi|974751143|gb|KU238092.1|13028-12189 gi|975048878|gb|CP013962.1|2821897-2822736 gi|974255378|gb|CP008857.1|6671283-6672122
Resfinder	Sul|SulI|AF071413|6700-7539|840|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_1_AY224185
ARG-ANNOT	Bla|CTX-M-38|AY753197|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-38:AY753197:1-876:876
NCBI	Bla|CTX-M-38|AY753197|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|54292584|gb|AY753197.1|1-876
NCBI	Tmt|dfrC_1_GU565967|Trimethoprim|Dihydrofolate_reductase|DFRC|RequiresSNPConfirmation	gi|974700633|dbj|AP017321.1|36923-36438 gi|937264049|gb|KT429160.1|125882-125397 gi|899750899|gb|CP012121.1|26810-27295 gi|828461663|gb|CP007674.1|38226-38711 gi|675304693|gb|CP007500.1|24476-24961 gi|302749911|gb|CP002120.1|2093788-2093303 gi|300492196|gb|GU565967.1|16269-16754 gi|260177120|gb|GQ900494.1|24792-25277 gi|260066135|gb|GQ900433.1|42239-42724 gi|260066123|gb|GQ900421.1|48939-49424
NCBI	Bla|EU086834.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|404429427|emb|HE793032.1|162237-161375 gi|158634583|gb|EU086834.1|36-898
CARD	CARD|phgb|AF237667|0-1446|ARO:3002813|lmrB|MLS|Lincosamide_efflux_pump|LMRB	@phgb|AF237667|0-1446|ARO:3002813|lmrB [Corynebacterium glutamicum]
NCBI	CARD|phgb|AF237667|0-1446|ARO:3002813|lmrB|MLS|Lincosamide_efflux_pump|LMRB	gi|529576558|gb|CP005959.1|2628908-2627463 gi|385142182|emb|HE802067.1|2859055-2857610 gi|42602314|dbj|BA000036.3|2859056-2857611 gi|7211794|gb|AF237667.1|101-1546 gi|41326831|emb|BX927156.1|38777-37332
NCBI	gi|2765064|emb|Y10278.1|betalactams|Class_A_betalactamases|CTX	gi|953271687|gb|KT175891.1|137-1015 gi|930714478|gb|KR093975.1|153-1031 gi|930714476|gb|KR093974.1|183-1061 gi|923480230|gb|KP902666.1|203-1081 gi|800908771|gb|KP125893.1|130342-129464 gi|762041701|gb|KJ201887.1|9169-8291 gi|668347631|dbj|AB976577.1|1932-2810 gi|668347606|dbj|AB976571.1|1232-2110 gi|668347594|dbj|AB976568.1|1325-2203 gi|578355140|gb|KF914891.1|43942-43064
NCBI	gi|157812671|gb|EU177100.1|betalactams|Class_A_betalactamases|CTX	gi|157812671|gb|EU177100.1|1-893
ARG-ANNOT	Bla|OXA-82|GQ352402|8775-9599|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-82:GQ352402:8775-9599:825
NCBI	Bla|OXA-82|GQ352402|8775-9599|825|betalactams|Class_D_betalactamases|OXA	gi|255076961|gb|GQ352402.1|8775-9599 gi|115583748|gb|DQ987479.1|1-825
Resfinder	Bla|OXA-82|GQ352402|8775-9599|825|betalactams|Class_D_betalactamases|OXA	blaOXA-82_1_GQ352402
ARG-ANNOT	CARD|phgb|D38215|0-1539|ARO:3002893|tcr3|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TCR3	(Tet)Tcr-3:D38215:516-2954:1539
CARD	CARD|phgb|D38215|0-1539|ARO:3002893|tcr3|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TCR3	@phgb|D38215|0-1539|ARO:3002893|tcr3 [Streptomyces aureofaciens]
NCBI	CARD|phgb|D38215|0-1539|ARO:3002893|tcr3|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TCR3	gi|1217599|dbj|D38215.1|STMTCR3|516-2054
Resfinder	CARD|phgb|D38215|0-1539|ARO:3002893|tcr3|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TCR3	tcr_1_D38215
NCBI	gi|160948448|emb|AM176552.2|betalactams|Class_A_betalactamases|SHV	gi|160948448|emb|AM176552.2|1-891
CARD	CARD|phgb|JQ340365|0-1434|ARO:3003583|PmrB|Cationic_antimicrobial_peptides|Polymyxin_B_resistance_regulator|PMRB	@phgb|JQ340365|0-1434|ARO:3003583|PmrB [Pseudomonas aeruginosa]
NCBI	CARD|phgb|JQ340365|0-1434|ARO:3003583|PmrB|Cationic_antimicrobial_peptides|Polymyxin_B_resistance_regulator|PMRB	gi|975043142|gb|CP013989.1|5477056-5478489 gi|974341323|gb|CP008868.1|743615-745048 gi|968567191|gb|CP013680.1|930407-931840 gi|371574701|gb|JQ340365.1|1-1434
ARG-ANNOT	Bla|TEM-59|AF062386|31-862|832|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-59:AF062386:31-862:832
CARD	Bla|TEM-59|AF062386|31-862|832|betalactams|Class_A_betalactamases|TEM	@phgb|AF062386|30-862|ARO:3000928|TEM-59 [Klebsiella oxytoca]
NCBI	Bla|TEM-59|AF062386|31-862|832|betalactams|Class_A_betalactamases|TEM	gi|5650760|gb|AF062386.1|AF062386|31-862
ARG-ANNOT	Bla|CMY-21|DQ139328|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-21:DQ139328:1-1146:1146
CARD	Bla|CMY-21|DQ139328|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|DQ139328|160-1306|ARO:3002032|CMY-21 [Escherichia coli]
Lahey	Bla|CMY-21|DQ139328|1-1146|1146|betalactams|Class_C_betalactamases|CMY	AAZ66866.1 DQ139328.1:161-1306
NCBI	Bla|CMY-21|DQ139328|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|72199369|gb|DQ139328.1|161-1306
Resfinder	Bla|CMY-21|DQ139328|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-21_1_DQ139328
ARG-ANNOT	Bla|TEM-24|GQ293500|4033-4893|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-24:GQ293500:4033-4893:861
NCBI	Bla|TEM-24|GQ293500|4033-4893|861|betalactams|Class_A_betalactamases|TEM	gi|443900801|emb|FO203354.1|126950-127810 gi|695221081|ref|NG_039605.1|4033-4893 gi|695221062|ref|NG_039604.1|4033-4893
Resfinder	Bla|TEM-24|GQ293500|4033-4893|861|betalactams|Class_A_betalactamases|TEM	blaTEM-24_1_GQ293500
NCBI	Mdr|NC_002695.1.910541|Multi-drug_resistance|MDR_regulator|CPXAR	gi|937297913|gb|CP012802.1|4778006-4777308 gi|734586714|gb|CP010304.1|4925283-4924585 gi|667689599|gb|CP008957.1|4993256-4992558 gi|666001753|gb|CP008805.1|4960537-4959839 gi|386794017|gb|CP001925.1|4832382-4831684 gi|374356928|gb|CP003109.1|4701601-4700903 gi|290760697|gb|CP001846.1|4793272-4792574 gi|254590536|gb|CP001368.1|4964803-4964105 gi|209752427|gb|EU891940.1|1-699 gi|209157093|gb|CP001164.1|5008743-5008045
ARG-ANNOT	gi|84380854|gb|DQ328802.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-86:DQ328802:1-861:861
CARD	gi|84380854|gb|DQ328802.1|betalactams|Class_A_betalactamases|SHV	@phgb|DQ328802|0-861|ARO:3001140|SHV-86 [Klebsiella pneumoniae]
Lahey	gi|84380854|gb|DQ328802.1|betalactams|Class_A_betalactamases|SHV	ABC58727.1 DQ328802.1:1-861
NCBI	gi|84380854|gb|DQ328802.1|betalactams|Class_A_betalactamases|SHV	gi|84380854|gb|DQ328802.1|1-861
Resfinder	gi|84380854|gb|DQ328802.1|betalactams|Class_A_betalactamases|SHV	blaSHV-86_1_DQ328802
NCBI	Sul|AY758206.1|gene7|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|970698242|gb|KT988020.1|22634-23601 gi|970698221|gb|KT988019.1|7446-8413 gi|970698093|gb|KT988018.1|115120-116087 gi|982189197|gb|CP013993.1|5424787-5425754 gi|982189197|gb|CP013993.1|5430539-5431065 gi|974751143|gb|KU238092.1|13029-12062 gi|975048878|gb|CP013962.1|2821896-2822863 gi|974255378|gb|CP008857.1|6671282-6672249 gi|974022331|gb|CP013924.1|2757406-2756439 gi|974022331|gb|CP013924.1|1441529-1442393 gi|973715451|gb|CP013836.1|106323-105356 gi|973715451|gb|CP013836.1|118429-119396 gi|973585379|gb|KP054476.2|53137-54104 gi|973585379|gb|KP054476.2|33768-34632
NCBI	Bla|SHV-1_16_FJ668800|betalactams|Class_A_betalactamases|SHV	gi|742679781|gb|CP006738.1|2729064-2729924 gi|549815675|gb|CP006648.1|1717001-1716141 gi|695220748|ref|NG_039545.1|77-937
Resfinder	Bla|SHV-1_16_FJ668800|betalactams|Class_A_betalactamases|SHV	blaSHV-1_16_FJ668800
CARD	CARD|phgb|AE017334|1495400-1496297|ARO:3003072|Bacillus|MLS|Macrolide_phosphotransferases|MPH	@phgb|AE017334|1495400-1496297|ARO:3003072|Bacillus intrinsic mph [Bacillus anthracis str. 'Ames Ancestor']
NCBI	CARD|phgb|AE017334|1495400-1496297|ARO:3003072|Bacillus|MLS|Macrolide_phosphotransferases|MPH	gi|984728683|gb|CP014179.1|1495401-1496298 gi|924547193|gb|CP012519.1|1494991-1495888 gi|821571517|dbj|AP014833.1|3974529-3973632 gi|756780057|gb|CP010852.1|1774802-1775699 gi|753757473|gb|CP010322.1|4441045-4441942 gi|753736311|gb|CP009981.1|2996168-2995271 gi|753718837|gb|CP009902.1|355427-354530 gi|753541995|gb|CP009598.1|3368995-3368098 gi|753490707|gb|CP009700.1|881204-880307 gi|753470659|gb|CP009544.1|3379858-3378961
CARD	Elf|NC_007622.3795131|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|NC_007622|559336-560521|ARO:3001312|elfamycin resistant EF-Tu [Staphylococcus aureus RF122]
NCBI	Elf|NC_007622.3795131|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|82655308|emb|AJ938182.1|559337-560521
ARG-ANNOT	Bla|OKP-B-6|AY850171|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-6:AY850171:1-861:861
NCBI	Bla|OKP-B-6|AY850171|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|57339493|gb|AY850171.1|68-928
Resfinder	Bla|OKP-B-6|AY850171|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-6_1_AY850171
ARG-ANNOT	Bla|OKP-B-4|AM051153|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-4:AM051153:1-861:861
CARD	Bla|OKP-B-4|AM051153|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051153|0-861|ARO:3002437|OKP-B-4 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-4|AM051153|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655085|emb|AM051153.1|1-861
Resfinder	Bla|OKP-B-4|AM051153|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-4_1_AM051153
NCBI	475|unknown_id|unknown_name|betalactams|Class_A_betalactamases|PENA	gi|169647622|gb|EU408346.1|5713-4826
ARG-ANNOT	AGly|AadA7|AF224733|32-829|798|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA7:AF224733:32-829:798
NCBI	AGly|AadA7|AF224733|32-829|798|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|971187766|gb|KT598359.1|629-1426 gi|970955107|gb|KT581256.1|646-1443 gi|970861134|gb|KT427378.1|671-1468 gi|817491263|gb|KP313760.1|27030-27827 gi|751372772|gb|KM823523.1|629-1426 gi|751372769|gb|KM823522.1|611-1408 gi|726966122|gb|KM386406.1|629-1426 gi|704485635|gb|KJ186149.1|28561-29358 gi|678222149|gb|KJ909290.1|113298-114095 gi|667714421|gb|AY463797.8|28040-28837
Resfinder	AGly|AadA7|AF224733|32-829|798|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA7_1_AF224733
NCBI	Bla|SHV-12_3_FJ668805|betalactams|Class_A_betalactamases|SHV	gi|256862155|gb|GQ389700.1|1-861 gi|695220758|ref|NG_039550.1|77-937
Resfinder	Bla|SHV-12_3_FJ668805|betalactams|Class_A_betalactamases|SHV	blaSHV-12_3_FJ668805
NCBI	248|unknown_id|unknown_name|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|924867386|gb|KT346360.1|3167-3808 gi|695211247|ref|NG_036045.1|683-42
NCBI	226|FJ196385.1|FJ196385|betalactams|Class_D_betalactamases|OXA	gi|937637492|gb|KT334335.1|98367-97525 gi|928083869|gb|CP012682.1|75273-74431 gi|828971497|gb|CP011644.1|25581-26423 gi|743008998|gb|CP010362.1|66627-65785 gi|742999823|gb|CP010396.1|9100-8258 gi|660582341|gb|CP008800.1|52487-53329 gi|587656709|gb|KF921569.1|615-1457 gi|587656699|gb|KF921568.1|615-1457 gi|587656689|gb|KF921567.1|615-1457 gi|587656679|gb|KF921566.1|615-1457
NCBI	gi|452107691|gb|KC351754.1|betalactams|Class_A_betalactamases|CTX	gi|452107691|gb|KC351754.1|1-1090
NCBI	Bla|AJ584652.2|gene3|betalactams|Class_B_betalactamases|IMP	gi|37653301|emb|AJ584652.2|1032-1784
NCBI	gi|46370396|gb|AY589495.1|betalactams|Class_A_betalactamases|TEM	gi|46370396|gb|AY589495.1|1-1042
NCBI	1597|HQ713678.1|HQ713678|Phenicol|Phenicol_efflux_pumps|CML	gi|971497538|gb|CP012902.1|79350-78037 gi|943457735|gb|KT818627.1|94711-96024 gi|943457735|gb|KT818627.1|156304-157617 gi|969995310|gb|KT317086.1|1690-3003 gi|969995276|gb|KT317085.1|13799-15112 gi|930425888|gb|KR067579.1|227-1540 gi|884906146|gb|CP012007.1|96677-97990 gi|823683259|emb|LN831185.1|66244-67557 gi|823682865|emb|LN831184.1|249956-248643 gi|822476033|dbj|LC055503.1|101761-103074 gi|778408585|gb|CP009414.2|118874-120187
ARG-ANNOT	Bla|TEM-6|X57972|340-1200|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-6:X57972:340-1200:861
CARD	Bla|TEM-6|X57972|340-1200|861|betalactams|Class_A_betalactamases|TEM	@phgb|X57972|339-1200|ARO:3000878|TEM-6 [Escherichia coli]
Lahey	Bla|TEM-6|X57972|340-1200|861|betalactams|Class_A_betalactamases|TEM	CAA41038.1 X57972.1:340-1200
NCBI	Bla|TEM-6|X57972|340-1200|861|betalactams|Class_A_betalactamases|TEM	gi|41816|emb|X57972.1|340-1200
Resfinder	Bla|TEM-6|X57972|340-1200|861|betalactams|Class_A_betalactamases|TEM	blaTEM-6_1_X57972
CARD	CARD|phgb|EU250284|3557-4658|ARO:3002974|vanTrL|Glycopeptides|VanL-type_resistance_protein|VANTRL	@phgb|EU250284|3557-4658|ARO:3002974|vanTrL [Enterococcus faecalis]
NCBI	CARD|phgb|EU250284|3557-4658|ARO:3002974|vanTrL|Glycopeptides|VanL-type_resistance_protein|VANTRL	gi|160947039|gb|EU250284.1|3558-4659
CARD	CARD|phgb|AY154657|0-1161|ARO:3000601|Erm38|MLS|23S_rRNA_methyltransferases|ERM	@phgb|AY154657|0-1161|ARO:3000601|Erm(38) [Mycobacterium smegmatis]
NCBI	CARD|phgb|AY154657|0-1161|ARO:3000601|Erm38|MLS|23S_rRNA_methyltransferases|ERM	gi|34733386|gb|AY154657.2|63-1223 gi|27436725|gb|AY154656.1|59-358
ARG-ANNOT	Bla|OKP-A-5|AM051143|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-5:AM051143:1-861:861
CARD	Bla|OKP-A-5|AM051143|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051143|0-861|ARO:3002422|OKP-A-5 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-5|AM051143|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655067|emb|AM051143.1|1-861
Resfinder	Bla|OKP-A-5|AM051143|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-5_1_AM051143
CARD	gi|728797461|emb|LN515533.1|betalactams|Class_A_betalactamases|SHV	@phgb|LN515533|0-867|ARO:3003154|SHV-187 [Klebsiella pneumoniae]
Lahey	gi|728797461|emb|LN515533.1|betalactams|Class_A_betalactamases|SHV	CEA29750.1 LN515533.1:1-867
NCBI	gi|728797461|emb|LN515533.1|betalactams|Class_A_betalactamases|SHV	gi|940656576|gb|CP012883.1|5133971-5133105 gi|728797461|emb|LN515533.1|1-867 gi|160948460|emb|AM176558.2|1-861 gi|74058436|gb|DQ166781.1|3-861
ARG-ANNOT	gi|401871164|gb|JX121120.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-153:JX121120:1-858:858
CARD	gi|401871164|gb|JX121120.1|betalactams|Class_A_betalactamases|SHV	@phgb|JX121120|0-858|ARO:3001192|SHV-153 [Klebsiella pneumoniae]
Lahey	gi|401871164|gb|JX121120.1|betalactams|Class_A_betalactamases|SHV	AFQ23959.1 JX121120.1:1-858
NCBI	gi|401871164|gb|JX121120.1|betalactams|Class_A_betalactamases|SHV	gi|401871164|gb|JX121120.1|1-858
Resfinder	gi|401871164|gb|JX121120.1|betalactams|Class_A_betalactamases|SHV	blaSHV-153_1_JX121120
ARG-ANNOT	957|M97297.1|TRNVAN|Glycopeptides|VanA-type_resistance_protein|VANXA	(Gly)VanX-A:M97297:8016-8624:609
CARD	957|M97297.1|TRNVAN|Glycopeptides|VanA-type_resistance_protein|VANXA	@phgb|M97297|8016-8624|ARO:3002949|vanXA [Enterococcus faecium]
NCBI	957|M97297.1|TRNVAN|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|925192758|gb|CP012594.1|32722-32114 gi|695226492|ref|NG_041525.1|10280-10888 gi|359465430|dbj|AB611033.1|12415-11807 gi|343429995|dbj|AB663321.1|8016-8624 gi|312836941|dbj|AB563188.1|61665-61057 gi|304325020|gb|GQ484956.1|29989-30597 gi|304324978|gb|GQ484955.1|28901-29509 gi|304324937|gb|GQ484954.1|24226-24834 gi|695220799|ref|NG_039568.1|10017-10625 gi|227069718|gb|FJ866609.1|5760-6368
Resfinder	957|M97297.1|TRNVAN|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-A_1_FJ866609
CARD	CARD|phgb|BX664015|103017-103833|ARO:3002641|APH3-PRIME-Ia|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|BX664015|103017-103833|ARO:3002641|APH(3')-Ia [Serratia marcescens]
NCBI	CARD|phgb|BX664015|103017-103833|ARO:3002641|APH3-PRIME-Ia|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|973585379|gb|KP054476.2|64007-64823 gi|969982025|gb|KT317084.1|882-66 gi|969982003|gb|KT317083.1|882-66 gi|969981973|gb|KT317082.1|882-66 gi|944398239|gb|CP013025.1|2340901-2340085 gi|909010439|gb|JN247441.4|85925-85109 gi|828959694|gb|CP011636.1|3726153-3725337 gi|827403829|gb|CP010779.1|2710750-2709934 gi|817614502|gb|KF483599.2|72673-73489 gi|817554816|gb|GQ406245.5|37858-38674
ARG-ANNOT	Gly|VanH-A|FJ86609|3762-4730|969|Glycopeptides|VanA-type_resistance_protein|VANHA	(Gly)VanH-A:FJ866609:3762-4730:969
CARD	Gly|VanH-A|FJ86609|3762-4730|969|Glycopeptides|VanA-type_resistance_protein|VANHA	@phgb|M97297|6018-6986|ARO:3002942|vanHA [Enterococcus faecium]
NCBI	Gly|VanH-A|FJ86609|3762-4730|969|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|975002886|gb|CP013996.1|2043-3011 gi|925192758|gb|CP012594.1|34721-33753 gi|830872341|gb|KR349520.1|7280-8248 gi|816206772|gb|KR047792.1|7281-8249 gi|409183623|gb|JQ663598.1|18577-17609 gi|695226492|ref|NG_041525.1|8282-9250 gi|359465430|dbj|AB611033.1|14413-13445 gi|343429995|dbj|AB663321.1|6018-6986 gi|319739722|gb|HQ115078.1|19221-18253 gi|312836941|dbj|AB563188.1|63663-62695
Resfinder	Gly|VanH-A|FJ86609|3762-4730|969|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-A_1_FJ866609
CARD	gi|698174175|gb|KM087842.1|betalactams|Class_D_betalactamases|OXA	@phgb|KM087842|0-822|ARO:3001584|OXA-398 [Acinetobacter baumannii]
Lahey	gi|698174175|gb|KM087842.1|betalactams|Class_D_betalactamases|OXA	AIT76095.1 KM087842.1:1-822
NCBI	gi|698174175|gb|KM087842.1|betalactams|Class_D_betalactamases|OXA	gi|698174175|gb|KM087842.1|1-822
ARG-ANNOT	gi|408535166|dbj|AB753456.1|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-42:AB753456:1-741:741
CARD	gi|408535166|dbj|AB753456.1|betalactams|Class_B_betalactamases|IMP	@phgb|AB753456|0-741|ARO:3002233|IMP-42 [Acinetobacter soli]
Lahey	gi|408535166|dbj|AB753456.1|betalactams|Class_B_betalactamases|IMP	BAM62793.1 AB753456.1:1-741
NCBI	gi|408535166|dbj|AB753456.1|betalactams|Class_B_betalactamases|IMP	gi|408535166|dbj|AB753456.1|1-741
Resfinder	gi|408535166|dbj|AB753456.1|betalactams|Class_B_betalactamases|IMP	blaIMP-42_1_AB753456
CARD	gi|698174167|gb|KM087838.1|betalactams|Class_C_betalactamases|CMY	@phgb|KM087838|0-1146|ARO:3002129|CMY-118 [Citrobacter freundii]
Lahey	gi|698174167|gb|KM087838.1|betalactams|Class_C_betalactamases|CMY	AIT76091.1 KM087838.1:1-1146
NCBI	gi|698174167|gb|KM087838.1|betalactams|Class_C_betalactamases|CMY	gi|698174167|gb|KM087838.1|1-1146
NCBI	Mdr|U46859.1|gene23|Multi-drug_resistance|Multi-drug_efflux_pumps|ROSA	gi|1197638|gb|U46859.1|YEU46859|25527-24295
NCBI	Met|nimH_1_FJ969397|Metronidazole|nim_nitroimidazole_reductase|NIMA	gi|238800276|gb|FJ969397.1|1-457
Resfinder	Met|nimH_1_FJ969397|Metronidazole|nim_nitroimidazole_reductase|NIMA	nimH_1_FJ969397
CARD	CARD|phgb|KF732714|0-657|ARO:3002798|QnrS9|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	@phgb|KF732714|0-657|ARO:3002798|QnrS9 [Klebsiella pneumoniae]
NCBI	CARD|phgb|KF732714|0-657|ARO:3002798|QnrS9|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|570826315|gb|KF732714.1|1-657
ARG-ANNOT	Bla|TEM-118|AY130285|1-785|785|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-118:AY130285:1-785:785
CARD	Bla|TEM-118|AY130285|1-785|785|betalactams|Class_A_betalactamases|TEM	@phgb|AY130285|0-785|ARO:3000981|TEM-118 [Klebsiella oxytoca]
NCBI	Bla|TEM-118|AY130285|1-785|785|betalactams|Class_A_betalactamases|TEM	gi|23505687|gb|AY130285.1|1-785 gi|808157946|gb|KP870110.1|4250-4200
CARD	1747|AB926431.1|AB926431|betalactams|Class_B_betalactamases|NDM	@phgb|AB926431|510-1323|ARO:3002362|NDM-12 [Escherichia coli]
Lahey	1747|AB926431.1|AB926431|betalactams|Class_B_betalactamases|NDM	BAO79439.1 AB926431.1:511-1323
NCBI	1747|AB926431.1|AB926431|betalactams|Class_B_betalactamases|NDM	gi|633259746|dbj|AB926431.1|511-1323
Resfinder	1747|AB926431.1|AB926431|betalactams|Class_B_betalactamases|NDM	blaNDM-12_1_AB926431
ARG-ANNOT	956|M97297.1|TRNVAN|Glycopeptides|VanA-type_resistance_protein|VANA	(Gly)VanA-A:M97297:6979-8010:1032
CARD	956|M97297.1|TRNVAN|Glycopeptides|VanA-type_resistance_protein|VANA	@phgb|M97297|6979-8010|ARO:3000010|vanA [Enterococcus faecium]
NCBI	956|M97297.1|TRNVAN|Glycopeptides|VanA-type_resistance_protein|VANA	gi|695226492|ref|NG_041525.1|9243-10274 gi|359465430|dbj|AB611033.1|13452-12421 gi|343429995|dbj|AB663321.1|6979-8010 gi|312836941|dbj|AB563188.1|62702-61671 gi|695224489|ref|NG_041086.1|6751-5720 gi|304325020|gb|GQ484956.1|28460-29491 gi|304324978|gb|GQ484955.1|27864-28895 gi|304324937|gb|GQ484954.1|23189-24220 gi|695220799|ref|NG_039568.1|8980-10011 gi|196158933|emb|AM932524.1|6979-8010
Resfinder	956|M97297.1|TRNVAN|Glycopeptides|VanA-type_resistance_protein|VANA	VanA_2_M97297
ARG-ANNOT	Bla|LEN-23|AM850913|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-23:AM850913:1-861:861
CARD	Bla|LEN-23|AM850913|1-861|861|betalactams|Class_A_betalactamases|LEN	@phgb|AM850913|0-861|ARO:3002470|LEN-23 [Klebsiella pneumoniae]
NCBI	Bla|LEN-23|AM850913|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|197724698|emb|AM850913.2|1-861
Resfinder	Bla|LEN-23|AM850913|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN23_1_AM850913
CARD	AGly|AF031332.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF031332|0-441|ARO:3002568|AAC(6')-Ix [Acinetobacter sp. BM2722]
NCBI	AGly|AF031332.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|2909816|gb|AF031332.1|1-441
ARG-ANNOT	Bla|SHV-85|DQ322460|16-876|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-85:DQ322460:16-876:861
CARD	Bla|SHV-85|DQ322460|16-876|861|betalactams|Class_A_betalactamases|SHV	@phgb|DQ322460|15-876|ARO:3001139|SHV-85 [Klebsiella pneumoniae]
Lahey	Bla|SHV-85|DQ322460|16-876|861|betalactams|Class_A_betalactamases|SHV	ABC54571.1 DQ322460.1:16-876
NCBI	Bla|SHV-85|DQ322460|16-876|861|betalactams|Class_A_betalactamases|SHV	gi|84105058|gb|DQ322460.1|16-876
Resfinder	Bla|SHV-85|DQ322460|16-876|861|betalactams|Class_A_betalactamases|SHV	blaSHV-85_1_DQ322460
ARG-ANNOT	1815|AY236073.2|AY236073|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-48:AY236073:2188-2985:798
CARD	1815|AY236073.2|AY236073|betalactams|Class_D_betalactamases|OXA	@phgb|AY236073|2187-2985|ARO:3001782|OXA-48 [Klebsiella pneumoniae]
Lahey	1815|AY236073.2|AY236073|betalactams|Class_D_betalactamases|OXA	AAP70012.1 AY236073.2:2188-2985
NCBI	1815|AY236073.2|AY236073|betalactams|Class_D_betalactamases|OXA	gi|922059846|gb|KT265183.1|2028-2825 gi|922059842|gb|KT265182.1|2023-2820 gi|922059838|gb|KT265181.1|1990-2787 gi|922059834|gb|KT265180.1|2043-2840 gi|922059830|gb|KT265179.1|1994-2791 gi|922059826|gb|KT265178.1|1988-2785 gi|922059818|gb|KT265176.1|1843-2640 gi|922059810|gb|KT265174.1|1791-2588 gi|922059806|gb|KT265173.1|2021-2818 gi|762041807|gb|KP061858.1|3534-2737
Resfinder	1815|AY236073.2|AY236073|betalactams|Class_D_betalactamases|OXA	blaOXA-48_2_AY236073
NCBI	gi|591389161|gb|KF986263.1|betalactams|Class_D_betalactamases|OXA	gi|591389161|gb|KF986263.1|1-961
ARG-ANNOT	Bla|OXA-118|AF371964|119-919|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-118:AF371964:119-919:801
CARD	Bla|OXA-118|AF371964|119-919|801|betalactams|Class_D_betalactamases|OXA	@phgb|AF371964|118-919|ARO:3001768|OXA-118 [Burkholderia cepacia]
Lahey	Bla|OXA-118|AF371964|119-919|801|betalactams|Class_D_betalactamases|OXA	AAK55330.1 AF371964.1:119-919
NCBI	Bla|OXA-118|AF371964|119-919|801|betalactams|Class_D_betalactamases|OXA	gi|14164990|gb|AF371964.1|119-919
Resfinder	Bla|OXA-118|AF371964|119-919|801|betalactams|Class_D_betalactamases|OXA	blaOXA-118_1_AF371964
NCBI	1374|DQ077487.1|DQ077487|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET33	gi|70671867|gb|DQ077487.1|1-738
NCBI	AGly|CP004067.1|gene46|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	gi|540366916|gb|CP004067.1|43928-43008
CARD	Phe|M90091.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|X68412|0-648|ARO:3002670|cat [Listeria monocytogenes]
NCBI	Phe|M90091.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|1015405|gb|U35036.1|SAU35036|1167-1811 gi|311815|emb|X68412.1|1328-1972 gi|152664|gb|M90091.1|SBKCATA|86-730
Resfinder	Phe|M90091.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	cat_5_U35036
CARD	AGly|M23634.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|M23634|354-960|ARO:3002546|AAC(6')-Ib [Serratia marcescens]
NCBI	AGly|M23634.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|152815|gb|M23634.1|SMAACTYLA|355-960
CARD	Gly|NC_002745.1122806|Glycopeptides|Bleomycin_resistance_protein|BRP	@phgb|D86934|0-405|ARO:3001205|bleomycin resistance protein (BRP) [Staphylococcus aureus]
NCBI	Gly|NC_002745.1122806|Glycopeptides|Bleomycin_resistance_protein|BRP	gi|985566439|dbj|LC068960.1|7970-7566 gi|985566378|dbj|LC068959.1|19471-19067 gi|974697948|dbj|AP017320.1|40598-40194 gi|937637449|gb|KT601170.1|49730-49326 gi|908234448|gb|CP010309.1|325735-326139 gi|781886788|dbj|AP014653.1|40609-40205 gi|781883823|dbj|AP014652.1|40609-40205 gi|564687648|gb|KC989517.1|6417-6821 gi|537389513|gb|CP003979.1|40610-40206 gi|695227767|ref|NG_041676.1|6417-6821
ARG-ANNOT	Bla|IMP-1|HM036079|114-854|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-1:HM036079:114-854:741
NCBI	Bla|IMP-1|HM036079|114-854|741|betalactams|Class_B_betalactamases|IMP	gi|633368068|gb|KJ406505.2|1167-1907 gi|296245046|gb|HM036079.1|114-854 gi|268627877|gb|GQ302618.2|64-804 gi|268627875|gb|GQ302617.2|69-809 gi|239702135|emb|FN397627.1|202-942 gi|209943876|gb|FJ267651.1|61-801 gi|209943874|gb|FJ267650.1|88-828
ARG-ANNOT	Bla|cfiA9|AB087234|1-750|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA9:AB087234:1-750:750
NCBI	Bla|cfiA9|AB087234|1-750|750|betalactams|Class_B_betalactamases|CFIA	gi|37812495|gb|AY372696.1|1796-2545 gi|22091073|dbj|AB087234.1|1-750
Resfinder	Bla|cfiA9|AB087234|1-750|750|betalactams|Class_B_betalactamases|CFIA	cfiA9_1_AB087234
ARG-ANNOT	Phe|PexA|HM537013|14055-25302|1248|Phenicol|Phenicol_efflux_pumps|PEXA	(Phe)PexA:HM537013:24055-25302:1248
NCBI	Phe|PexA|HM537013|14055-25302|1248|Phenicol|Phenicol_efflux_pumps|PEXA	gi|298571679|gb|HM537013.1|25302-24055
Resfinder	Phe|PexA|HM537013|14055-25302|1248|Phenicol|Phenicol_efflux_pumps|PEXA	pexA_1_HM537013
NCBI	1389|FN561628.1|FN561628|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|262113296|emb|FN561628.1|132-737 gi|971888686|gb|KT884517.1|37477-37866
Resfinder	1389|FN561628.1|FN561628|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA16_1_FN561628
NCBI	Tet|tetS_1_DQ377340|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETS	gi|90811349|gb|DQ377340.1|496-2421 gi|2467210|emb|X92946.1|27959-26034 gi|388785684|gb|JQ762256.1|3381-3410
Resfinder	Tet|tetS_1_DQ377340|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETS	tet(S)_1_DQ377340
ARG-ANNOT	Bla|CTX-M-129|JX017364|239-1114|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-129:JX017364:239-1114:876
CARD	Bla|CTX-M-129|JX017364|239-1114|876|betalactams|Class_A_betalactamases|CTX	@phgb|JX017364|238-1114|ARO:3001988|CTX-M-129 [Escherichia coli]
Lahey	Bla|CTX-M-129|JX017364|239-1114|876|betalactams|Class_A_betalactamases|CTX	AFJ59956.1 JX017364.1:239-1114
NCBI	Bla|CTX-M-129|JX017364|239-1114|876|betalactams|Class_A_betalactamases|CTX	gi|387165736|gb|JX017364.1|239-1114
Resfinder	Bla|CTX-M-129|JX017364|239-1114|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-129_1_JX017364
ARG-ANNOT	MLS|MefA|U70055|314-1531|1218|MLS|Macrolide_resistance_efflux_pumps|MEFA	(MLS)MefA:U70055:314-1531:1218
NCBI	MLS|MefA|U70055|314-1531|1218|MLS|Macrolide_resistance_efflux_pumps|MEFA	gi|301800973|emb|FQ312029.1|885994-887211 gi|90902665|gb|DQ445272.1|1-1218 gi|50902420|gb|CP000003.1|1168758-1167541 gi|50261575|gb|AY657002.1|3271-4488 gi|40218525|gb|AY445042.1|9623-10840 gi|18478326|gb|AF227521.1|3270-4487 gi|10119923|gb|AF227520.1|AF227520|3254-4471 gi|1669856|gb|U70055.1|SPU70055|314-1531
Resfinder	MLS|MefA|U70055|314-1531|1218|MLS|Macrolide_resistance_efflux_pumps|MEFA	mef(A)_3_AF227521
NCBI	Bla|KPC-4_1_AY700571|betalactams|Class_A_betalactamases|KPC	gi|909893998|gb|CP012168.1|175556-174676 gi|902717325|gb|KR091915.1|29965-30845 gi|429201046|gb|JX193301.1|54275-55155 gi|392356698|gb|JQ837276.1|28045-28925 gi|218685693|gb|FJ473382.1|365-1245 gi|168830102|gb|EU447304.1|16-896 gi|51557251|gb|AY700571.1|1-881
CARD	MLS|DQ195536.2|orf0|gene|MLS|Macrolide_glycosyltransferases|MGT	@phgb|DQ195536|0-1248|ARO:3000865|oleD [Streptomyces antibioticus]
NCBI	MLS|DQ195536.2|orf0|gene|MLS|Macrolide_glycosyltransferases|MGT	gi|98991149|gb|DQ195536.2|1-1248
ARG-ANNOT	Bla|GOB-1|AF090141|243-1115|873|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-1:AF090141:243-1115:873
CARD	Bla|GOB-1|AF090141|243-1115|873|betalactams|Class_B_betalactamases|GOB	@phgb|AF090141|242-1115|ARO:3000850|GOB-1 beta-lactamase [Elizabethkingia meningoseptica]
NCBI	Bla|GOB-1|AF090141|243-1115|873|betalactams|Class_B_betalactamases|GOB	gi|6164596|gb|AF090141.1|AF090141|243-1115 gi|9587047|gb|AF189294.1|1-756
Resfinder	Bla|GOB-1|AF090141|243-1115|873|betalactams|Class_B_betalactamases|GOB	blaGOB-1_2_AF090141
NCBI	gi|5002311|gb|AF148850.1|betalactams|Class_A_betalactamases|SHV	gi|5002311|gb|AF148850.1|AF148850|1-871 gi|562889800|gb|KF585134.1|46-908 gi|695220752|ref|NG_039547.1|75-937 gi|133905277|gb|CP000603.1|142442-141580 gi|4337047|gb|AF124984.1|AF124984|197-1059 gi|94502885|gb|DQ478720.1|1-861
ARG-ANNOT	950|J03306.1|PAZDHFRA|Trimethoprim|Dihydrofolate_reductase|DHFRIII|RequiresSNPConfirmation	(Tmt)DfrA3:J03306:103-591:489
CARD	950|J03306.1|PAZDHFRA|Trimethoprim|Dihydrofolate_reductase|DHFRIII|RequiresSNPConfirmation	@phgb|J03306|0-489|ARO:3003105|dfrA3 [Plasmid pAZ1]
NCBI	950|J03306.1|PAZDHFRA|Trimethoprim|Dihydrofolate_reductase|DHFRIII|RequiresSNPConfirmation	gi|150519|gb|J03306.1|PAZDHFRA|103-591
Resfinder	950|J03306.1|PAZDHFRA|Trimethoprim|Dihydrofolate_reductase|DHFRIII|RequiresSNPConfirmation	dfrA3_1_J03306
ARG-ANNOT	Bla|CTX-M-10|AF255298|1-873|873|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-10:AF255298:1-873:873
CARD	Bla|CTX-M-10|AF255298|1-873|873|betalactams|Class_A_betalactamases|CTX	@phgb|AY598759|0-876|ARO:3001873|CTX-M-10 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-10|AF255298|1-873|873|betalactams|Class_A_betalactamases|CTX	AAF65843.1 AF255298.1:1-873
NCBI	Bla|CTX-M-10|AF255298|1-873|873|betalactams|Class_A_betalactamases|CTX	gi|7649305|gb|AF255298.1|AF255298|1-873 gi|695210886|ref|NG_035976.1|5010-5882
Resfinder	Bla|CTX-M-10|AF255298|1-873|873|betalactams|Class_A_betalactamases|CTX	blaCTX-M-10_1_AY598759
ARG-ANNOT	Bla|IND-12|HM245380|28-759|732|betalactams|Class_B_betalactamases|IND	(Bla)IND-12:HM245380:28-759:732
CARD	Bla|IND-12|HM245380|28-759|732|betalactams|Class_B_betalactamases|IND	@phgb|HM245380|27-759|ARO:3002268|IND-12 [Chryseobacterium indologenes]
Lahey	Bla|IND-12|HM245380|28-759|732|betalactams|Class_B_betalactamases|IND	ADK25051.1 HM245380.1:28-759
NCBI	Bla|IND-12|HM245380|28-759|732|betalactams|Class_B_betalactamases|IND	gi|300510841|gb|HM245380.1|28-759
Resfinder	Bla|IND-12|HM245380|28-759|732|betalactams|Class_B_betalactamases|IND	blaIND-12_1_HM245380
CARD	182|AF118107.1|AF118107|Phenicol|Phenicol_efflux_pumps|FLOR	@phgb|AF261825|30481-31696|ARO:3002705|floR [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	182|AF118107.1|AF118107|Phenicol|Phenicol_efflux_pumps|FLOR	gi|700676355|gb|KM234279.1|30480-31694 gi|777182157|emb|LN829403.1|63798-65012 gi|704485843|gb|KJ186153.1|30474-31688 gi|704485786|gb|KJ186152.1|30480-31694 gi|618631222|gb|CP007581.1|4113771-4114985 gi|545006446|emb|HF937208.1|4113771-4114985 gi|481190437|gb|JX121641.1|54464-55678 gi|481190252|gb|JX121639.1|29835-31049 gi|87047966|gb|AY339985.2|3370-4584 gi|12719011|gb|AF261825.2|30482-31696
Resfinder	182|AF118107.1|AF118107|Phenicol|Phenicol_efflux_pumps|FLOR	floR_2_AF118107
NCBI	AGly|str_2_FN435330|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|961575513|gb|CP013623.1|1013-1861 gi|283471934|emb|AM990994.1|185-1033 gi|255914602|emb|FN435330.1|1-849 gi|46643|emb|X06627.1|1-774 gi|46643|emb|X06627.1|4323-4397 gi|222121420|dbj|AP009489.1|653-1 gi|222121420|dbj|AP009489.1|4398-4203 gi|919235037|gb|KR778883.1|1-432
Resfinder	AGly|str_2_FN435330|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	str_2_FN435330
NCBI	Tmt|dfrA1_2_AJ419168|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|16945302|emb|AJ419168.1|118-591
Resfinder	Tmt|dfrA1_2_AJ419168|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA1_2_AJ419168
ARG-ANNOT	Tmt|DfrA30|AM997279|705-1178|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA30:AM997279:705-1178:474
NCBI	Tmt|DfrA30|AM997279|705-1178|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|308192143|emb|AM997279.2|705-1178
Resfinder	Tmt|DfrA30|AM997279|705-1178|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA30_1_AM997279
CARD	gi|160858187|emb|AJ866285.2|betalactams|Class_A_betalactamases|SHV	@phgb|AJ866285|0-861|ARO:3001117|SHV-62 [Klebsiella pneumoniae]
Lahey	gi|160858187|emb|AJ866285.2|betalactams|Class_A_betalactamases|SHV	CAI30651.2 AJ866285.2:1-861
NCBI	gi|160858187|emb|AJ866285.2|betalactams|Class_A_betalactamases|SHV	gi|160858187|emb|AJ866285.2|1-861
Resfinder	gi|160858187|emb|AJ866285.2|betalactams|Class_A_betalactamases|SHV	blaSHV-62_1_AJ866285
CARD	Gly|DQ212986.1|gene7|Glycopeptides|VanG-type_accessory_protein|VANWG	@phgb|DQ212986|5137-5983|ARO:3002965|vanWG [Enterococcus faecalis]
NCBI	Gly|DQ212986.1|gene7|Glycopeptides|VanG-type_accessory_protein|VANWG	gi|762041216|gb|KF697366.1|37848-38693 gi|672937785|gb|KF686317.1|37848-38693 gi|692189312|gb|KF722997.1|1-846 gi|674114364|gb|CP007573.1|763702-764547 gi|674107077|gb|CP007570.1|641958-642803 gi|77380191|gb|DQ212986.1|5138-5983
ARG-ANNOT	AGly|Aph6-Ia|AY971801|1-924|924|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	(AGly)Aph6-Ia:AY971801:1-924:924
NCBI	AGly|Aph6-Ia|AY971801|1-924|924|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|178462309|dbj|AP009493.1|6940981-6941904 gi|62896300|emb|AJ862840.1|34001-34924 gi|62422019|gb|AY971801.1|1-924 gi|286143443|gb|GU384072.1|1-534
Resfinder	AGly|Aph6-Ia|AY971801|1-924|924|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	aph(6)-Ia_1_AY971801
CARD	CARD|phgb|AE004091.2|4903465-4904596|ARO:3003030|mexV|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXV	@phgb|AE004091.2|4903465-4904596|ARO:3003030|mexV [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|AE004091.2|4903465-4904596|ARO:3003030|mexV|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXV	gi|974341323|gb|CP008868.1|301512-302642 gi|926451317|emb|LN871187.1|4903460-4904590 gi|915391195|dbj|AP014839.2|5117093-5118223 gi|553895034|gb|CP006832.1|4903461-4904591 gi|553886202|gb|CP006831.1|4904546-4905676 gi|543879514|gb|CP006705.1|4683050-4684180 gi|110227054|gb|AE004091.2|4903466-4904596
CARD	gi|698174189|gb|KM087849.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087849|0-1140|ARO:3002150|DHA-19 [Morganella morganii]
Lahey	gi|698174189|gb|KM087849.1|betalactams|Class_C_betalactamases|DHA	AIT76102.1 KM087849.1:1-1140
NCBI	gi|698174189|gb|KM087849.1|betalactams|Class_C_betalactamases|DHA	gi|698174189|gb|KM087849.1|1-1140
NCBI	Sul|CP001581.1|gene938|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|226840737|gb|CP001581.1|1031347-1032534
NCBI	Flq|NC_007793.3912939|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|899750970|gb|CP012120.1|942104-939441 gi|743649775|gb|CP010300.1|7032-9695 gi|743624649|gb|CP010299.1|7032-9695 gi|743618732|gb|CP010298.1|7032-9695 gi|743615870|gb|CP010297.1|7032-9695 gi|743612995|gb|CP010296.1|7032-9695 gi|743602172|gb|CP010295.1|7032-9695 gi|675300911|gb|CP007499.1|7032-9695 gi|584463070|gb|CP007176.1|7032-9695 gi|479274824|emb|HF937103.1|4902-7565
NCBI	Bla|TEM-29_1_DQ269440|betalactams|Class_A_betalactamases|TEM	gi|82468436|gb|DQ269440.1|1-861 gi|3281931|emb|Y17584.1|1-858
Resfinder	Bla|TEM-29_1_DQ269440|betalactams|Class_A_betalactamases|TEM	blaTEM-29_1_DQ269440
CARD	1582|KC999080.2|KC999080|betalactams|Class_B_betalactamases|NDM	@phgb|KC999080|379-1192|ARO:3002359|NDM-9 [Klebsiella pneumoniae subsp. pneumoniae]
Lahey	1582|KC999080.2|KC999080|betalactams|Class_B_betalactamases|NDM	AGU91756.1 KC999080.2:380-1192
NCBI	1582|KC999080.2|KC999080|betalactams|Class_B_betalactamases|NDM	gi|695227738|ref|NG_041673.1|380-1192
Resfinder	1582|KC999080.2|KC999080|betalactams|Class_B_betalactamases|NDM	blaNDM-9_1_KC999080
ARG-ANNOT	AGly|Aac6-Iai|EU886977|544-1110|567|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iai:EU886977:544-1110:567
CARD	AGly|Aac6-Iai|EU886977|544-1110|567|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|EU886977|543-1110|ARO:3002575|AAC(6')-Iai [Pseudomonas aeruginosa]
NCBI	AGly|Aac6-Iai|EU886977|544-1110|567|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|208436664|gb|EU886977.1|544-1110
Resfinder	AGly|Aac6-Iai|EU886977|544-1110|567|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iai_1_EU886977
NCBI	Elf|NC_002951.3236433|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|974161314|gb|CP012018.1|636272-637456 gi|974158397|gb|CP012015.1|636741-637925 gi|974155539|gb|CP012013.1|637457-638641 gi|974152716|gb|CP012012.1|636594-637778 gi|974149849|gb|CP012011.1|684285-685469 gi|941146344|gb|CP007676.1|567470-568654 gi|941142962|gb|CP007672.1|592203-593387 gi|941139768|gb|CP007657.1|592679-593863 gi|930584899|dbj|AP014942.1|558875-560059 gi|929858715|gb|CP010402.1|577774-578958
ARG-ANNOT	Bla|TEM-177|FN652295|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-177:FN652295:1-861:861
CARD	Bla|TEM-177|FN652295|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|FN652295|0-861|ARO:3001042|TEM-177 [Proteus mirabilis]
Lahey	Bla|TEM-177|FN652295|1-861|861|betalactams|Class_A_betalactamases|TEM	CBJ06718.1 FN652295.1:1-861
NCBI	Bla|TEM-177|FN652295|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|303304753|emb|FN652295.1|1-861
Resfinder	Bla|TEM-177|FN652295|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-177_1_FN652295
CARD	CARD|phgb|NC_002156|1429-2290|ARO:3000979|TEM-116|betalactams|Class_A_betalactamases|TEM	@phgb|NC_002156|1429-2290|ARO:3000979|TEM-116 [Staphylococcus aureus]
NCBI	CARD|phgb|NC_002156|1429-2290|ARO:3000979|TEM-116|betalactams|Class_A_betalactamases|TEM	gi|985700753|dbj|LC122351.1|10529-11390 gi|985700752|dbj|LC122350.1|4189-3328 gi|984294689|gb|KT388099.1|2398-3259 gi|984658875|dbj|LC121520.1|5103-5964 gi|974994122|gb|KR997561.1|5936-6797 gi|982281055|emb|LT009459.1|1412-2273 gi|982281046|emb|LT009458.1|1412-2273 gi|982281035|emb|LT009457.1|1412-2273 gi|982281026|emb|LT009456.1|1412-2273 gi|982281015|emb|LT009455.1|1412-2273
ARG-ANNOT	gi|357933380|dbj|AB634250.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-206:AB634250:1-825:825
CARD	gi|357933380|dbj|AB634250.1|betalactams|Class_D_betalactamases|OXA	@phgb|AB634250|0-825|ARO:3001484|OXA-206 [Acinetobacter baumannii]
Lahey	gi|357933380|dbj|AB634250.1|betalactams|Class_D_betalactamases|OXA	BAL15076.1 AB634250.1:1-825
NCBI	gi|357933380|dbj|AB634250.1|betalactams|Class_D_betalactamases|OXA	gi|357933380|dbj|AB634250.1|1-825
Resfinder	gi|357933380|dbj|AB634250.1|betalactams|Class_D_betalactamases|OXA	blaOXA-206_1_AB634250
ARG-ANNOT	Bla|CMY-95|JX514369|297-1483|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-95:JX514369:297-1483:1146
CARD	Bla|CMY-95|JX514369|297-1483|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JX514369|296-1442|ARO:3002108|CMY-95 [Escherichia coli]
Lahey	Bla|CMY-95|JX514369|297-1483|1146|betalactams|Class_C_betalactamases|CMY	AGC54799.1 JX514369.1:297-1442
NCBI	Bla|CMY-95|JX514369|297-1483|1146|betalactams|Class_C_betalactamases|CMY	gi|442540410|gb|JX514369.1|297-1442
Resfinder	Bla|CMY-95|JX514369|297-1483|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-95_1_JX514369
NCBI	Rif|AP010904.1|gene3156|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|239794502|dbj|AP010904.1|3534004-3529895
NCBI	MLS|msrA_2_AB013298|MLS|Macrolide_resistance_efflux_pumps|MSRA	gi|57207863|dbj|AB092817.1|5638-7104 gi|57157628|dbj|AB179623.1|23402-21936 gi|3892641|dbj|AB013298.1|487-1953
Resfinder	MLS|msrA_2_AB013298|MLS|Macrolide_resistance_efflux_pumps|MSRA	msr(A)_2_AB013298
ARG-ANNOT	Bla|CTX-M-59|EU622856|6869-7744|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-59:EU622856:6869-7744:876
CARD	Bla|CTX-M-59|EU622856|6869-7744|876|betalactams|Class_A_betalactamases|CTX	@phgb|DQ408762|0-876|ARO:3001920|CTX-M-59 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-59|EU622856|6869-7744|876|betalactams|Class_A_betalactamases|CTX	ABD73290.1 DQ408762.1:1-876
NCBI	Bla|CTX-M-59|EU622856|6869-7744|876|betalactams|Class_A_betalactamases|CTX	gi|186920237|gb|EU622856.1|6869-7744 gi|89475515|gb|DQ408762.1|1-876 gi|225579649|gb|FJ815244.1|1-873
Resfinder	Bla|CTX-M-59|EU622856|6869-7744|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-59_1_EU622856
NCBI	gi|388564835|gb|JQ733573.1|betalactams|Class_C_betalactamases|CMY	gi|388564835|gb|JQ733573.1|1028-2255
NCBI	gi|5002313|gb|AF148851.1|betalactams|Class_A_betalactamases|SHV	gi|5002313|gb|AF148851.1|AF148851|1-871 gi|675218243|emb|FO818745.1|22123-21261 gi|295917911|gb|GU732836.1|11-873 gi|110264421|gb|DQ449578.1|81849-80987 gi|695200097|ref|NG_035376.1|1439-2301 gi|43789|emb|X53433.1|929-1791 gi|150488|gb|M95179.1|P60BETALAC|185-1047 gi|695210228|ref|NG_035915.1|1-861
NCBI	Sul|AE000516.2|gene3902|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|4064308-4063490 gi|984989958|gb|CP010339.1|4037434-4036616 gi|984985728|gb|CP010338.1|4055014-4054196 gi|984981517|gb|CP010337.1|4039875-4039057 gi|984976917|gb|CP010336.1|4045889-4045071 gi|984972452|gb|CP010335.1|4057576-4056758 gi|984967653|gb|CP010334.1|4028670-4027852 gi|984963331|gb|CP010333.1|4027755-4026937 gi|984959134|gb|CP010332.1|3983950-3983132 gi|984954355|gb|CP010331.1|4006020-4005202
ARG-ANNOT	Bla|NMC-A|Z21956|1221-2099|879|betalactams|Class_A_betalactamases|NMCA	(Bla)NMC-A:Z21956:1221-2099:879
CARD	Bla|NMC-A|Z21956|1221-2099|879|betalactams|Class_A_betalactamases|NMCA	@phgb|Z21956|1220-2099|ARO:3003589|NmcA beta-lactamase [Enterobacter cloacae]
Lahey	Bla|NMC-A|Z21956|1221-2099|879|betalactams|Class_A_betalactamases|NMCA	CAA79967.1 Z21956.1:1221-2099
NCBI	Bla|NMC-A|Z21956|1221-2099|879|betalactams|Class_A_betalactamases|NMCA	gi|901708644|gb|KR919803.1|30634-29756 gi|848613023|gb|KR057496.1|8097-8975 gi|848612979|gb|KR057495.1|8097-8975 gi|848612886|gb|KR057493.1|8097-8975 gi|848612839|gb|KR057492.1|8097-8975 gi|33112004|emb|AJ536087.2|1030-1908 gi|396086|emb|Z21956.1|1221-2099
Resfinder	Bla|NMC-A|Z21956|1221-2099|879|betalactams|Class_A_betalactamases|NMCA	blaNMC-A_1_AJ536087
NCBI	gi|149167|gb|M88143.1|KPNBETALAC|betalactams|Class_A_betalactamases|TEM	gi|149167|gb|M88143.1|KPNBETALAC|1-1268
CARD	Bla|TEM-10_1_AF093512|betalactams|Class_A_betalactamases|TEM	@phgb|AF093512|197-1058|ARO:3000882|TEM-10 [Morganella morganii]
Lahey	Bla|TEM-10_1_AF093512|betalactams|Class_A_betalactamases|TEM	AAC72362.1 AF093512.1:198-1058
NCBI	Bla|TEM-10_1_AF093512|betalactams|Class_A_betalactamases|TEM	gi|3851587|gb|AF093512.1|AF093512|198-1058
Resfinder	Bla|TEM-10_1_AF093512|betalactams|Class_A_betalactamases|TEM	blaTEM-10_1_AF093512
CARD	CARD|phgb|NC_023287|65291-66509|ARO:3000615|mefA|MLS|Macrolide_resistance_efflux_pumps|MEFA	@phgb|NC_023287|65291-66509|ARO:3000615|mefA [Exiguobacterium sp. S3-2]
NCBI	CARD|phgb|NC_023287|65291-66509|ARO:3000615|mefA|MLS|Macrolide_resistance_efflux_pumps|MEFA	gi|568818634|gb|KF648874.1|65292-66510
ARG-ANNOT	gi|171705295|gb|EU419746.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-16:EU419746:1-801:801
CARD	gi|171705295|gb|EU419746.1|betalactams|Class_B_betalactamases|VIM	@phgb|EU419746|0-801|ARO:3002286|VIM-16 [Pseudomonas aeruginosa]
Lahey	gi|171705295|gb|EU419746.1|betalactams|Class_B_betalactamases|VIM	ACB54703.1 EU419746.1:1-801
NCBI	gi|171705295|gb|EU419746.1|betalactams|Class_B_betalactamases|VIM	gi|317017996|gb|GU390400.1|1062-1862 gi|171705295|gb|EU419746.1|1-801
Resfinder	gi|171705295|gb|EU419746.1|betalactams|Class_B_betalactamases|VIM	blaVIM-16_1_EU419746
ARG-ANNOT	Bla|TEM-113|AY589494|194-1054|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-113:AY589494:194-1054:861
CARD	Bla|TEM-113|AY589494|194-1054|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY589494|193-1054|ARO:3000976|TEM-113 [Proteus mirabilis]
Lahey	Bla|TEM-113|AY589494|194-1054|861|betalactams|Class_A_betalactamases|TEM	AAS89983.1 AY589494.1:194-1054
NCBI	Bla|TEM-113|AY589494|194-1054|861|betalactams|Class_A_betalactamases|TEM	gi|46370394|gb|AY589494.1|194-1054
Resfinder	Bla|TEM-113|AY589494|194-1054|861|betalactams|Class_A_betalactamases|TEM	blaTEM-113_1_AY589494
ARG-ANNOT	Bla|AmpC2|Ecoli|CP002970|332756-333889|1134|betalactams|Class_C_betalactamases|BLAEC	(Bla)AmpC2_Ecoli:CP002970:332756-333889:1134
NCBI	Bla|AmpC2|Ecoli|CP002970|332756-333889|1134|betalactams|Class_C_betalactamases|BLAEC	gi|985000614|gb|CP014225.1|2576033-2574900 gi|958627747|gb|CP013253.1|3624965-3626098 gi|939732440|gb|CP011343.2|4358948-4357815 gi|939731527|gb|CP011342.2|4359634-4358501 gi|937526251|gb|CP012870.1|262709-263842 gi|937521852|gb|CP012869.1|262709-263842 gi|937517453|gb|CP012868.1|262709-263842 gi|932857508|emb|LN877770.1|179663-178530 gi|923416119|gb|CP011113.1|4338345-4337212 gi|899729770|gb|CP012127.1|4353240-4352107
NCBI	gi|126013667|gb|EF418608.1|betalactams|Class_A_betalactamases|CTX	gi|126013667|gb|EF418608.1|1-890
NCBI	Bla|FJ785626.1|gene1|betalactams|Class_A_betalactamases|OXY	gi|257136311|gb|FJ785626.1|70-1004
ARG-ANNOT	gi|89077561|gb|DQ388882.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-142:DQ388882:1-861:861
CARD	gi|89077561|gb|DQ388882.1|betalactams|Class_A_betalactamases|TEM	@phgb|DQ388882|0-861|ARO:3001005|TEM-142 [Escherichia coli]
Lahey	gi|89077561|gb|DQ388882.1|betalactams|Class_A_betalactamases|TEM	ABD60314.1 DQ388882.1:1-861
NCBI	gi|89077561|gb|DQ388882.1|betalactams|Class_A_betalactamases|TEM	gi|89077561|gb|DQ388882.1|1-861
Resfinder	gi|89077561|gb|DQ388882.1|betalactams|Class_A_betalactamases|TEM	blaTEM-142_1_DQ388882
ARG-ANNOT	gi|191174821|emb|AM931008.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-38:AM931008:1-1146:1146
CARD	gi|191174821|emb|AM931008.1|betalactams|Class_C_betalactamases|CMY	@phgb|AM931008|0-1146|ARO:3002049|CMY-38 [Proteus mirabilis]
Lahey	gi|191174821|emb|AM931008.1|betalactams|Class_C_betalactamases|CMY	CAP60699.1 AM931008.1:1-1146
NCBI	gi|191174821|emb|AM931008.1|betalactams|Class_C_betalactamases|CMY	gi|191174821|emb|AM931008.1|1-1146
Resfinder	gi|191174821|emb|AM931008.1|betalactams|Class_C_betalactamases|CMY	blaCMY-38_1_AM931008
ARG-ANNOT	gi|4760642|dbj|AB010417.1|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-3:AB010417:1-741:741
CARD	gi|4760642|dbj|AB010417.1|betalactams|Class_B_betalactamases|IMP	@phgb|AB010417|0-741|ARO:3002194|IMP-3 [Shigella flexneri]
Lahey	gi|4760642|dbj|AB010417.1|betalactams|Class_B_betalactamases|IMP	BAA77393.1 AB010417.1:1-741
NCBI	gi|4760642|dbj|AB010417.1|betalactams|Class_B_betalactamases|IMP	gi|4760642|dbj|AB010417.1|1-741
Resfinder	gi|4760642|dbj|AB010417.1|betalactams|Class_B_betalactamases|IMP	blaIMP-3_1_AB010417
NCBI	Flq|NC_011586.7046300|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|602249473|gb|KC118540.6|41596-43815 gi|213054530|gb|CP001182.1|250701-252920
NCBI	1209|GQ202693.1|GQ202693|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|954629879|gb|CP013215.1|130784-131302 gi|944545016|gb|KR868995.1|371-889 gi|944545013|gb|KR868994.1|370-888 gi|806639053|gb|KM972600.1|1257-1775 gi|806639006|gb|KM972594.1|1230-1748 gi|806638978|gb|KM972589.1|1230-1748 gi|925170830|gb|KR337993.1|2043-2561 gi|925170817|gb|KR337990.1|1079-1597 gi|918039404|gb|KR259332.1|1738-2256 gi|914244709|gb|KR184824.1|573-1091
NCBI	gi|28912444|gb|AY210887.1|betalactams|Class_A_betalactamases|SHV	gi|28912444|gb|AY210887.1|112-980
ARG-ANNOT	Flq|QnrB4|DQ303921|4-648|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB4:DQ303921:4-648:645
CARD	Flq|QnrB4|DQ303921|4-648|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|DQ303921|0-648|ARO:3002718|QnrB4 [Escherichia coli]
NCBI	Flq|QnrB4|DQ303921|4-648|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|929916961|gb|KT225462.1|35171-35818 gi|822476033|dbj|LC055503.1|115656-115009 gi|633894420|emb|HG918041.1|146063-146710 gi|571430855|gb|KF793937.1|36545-35898 gi|563322895|gb|KF646592.1|9606-8959 gi|474560630|gb|KC848778.1|7998-7351 gi|389960039|gb|JQ356870.1|14763-14116 gi|389960015|gb|JN215524.1|16258-15611 gi|389959992|gb|JN215523.1|14786-14139 gi|695225222|ref|NG_041243.1|1223-576
Resfinder	Flq|QnrB4|DQ303921|4-648|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB4_1_DQ303921
ARG-ANNOT	MLS|VatE|AF139725|63-707|645|MLS|Streptogramin_A_O-acetyltransferase|VATE	(MLS)VatE:AF139725:63-707:645
CARD	MLS|VatE|AF139725|63-707|645|MLS|Streptogramin_A_O-acetyltransferase|VATE	@phgb|AF242872|3579-4224|ARO:3002844|vatE [Enterococcus faecium]
NCBI	MLS|VatE|AF139725|63-707|645|MLS|Streptogramin_A_O-acetyltransferase|VATE	gi|959203449|emb|HF570055.1|5853-6497 gi|28273038|emb|AJ488494.2|10102-9458 gi|9246952|gb|AF242872.1|3580-4224 gi|695199564|ref|NG_035261.1|4684-5328 gi|5532423|gb|AF139725.1|AF139725|63-707
CARD	Mdr|NC_002516.2.880450|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXH	@phgb|NC_002516|4706409-4707522|ARO:3000807|mexH [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.880450|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXH	gi|984355403|gb|CP008872.1|1086638-1085526 gi|974359204|gb|CP008871.1|5155688-5156800 gi|970332569|gb|CP013696.1|2299290-2298178 gi|968567191|gb|CP013680.1|4821436-4822548 gi|926451317|emb|LN871187.1|809426-808314 gi|881079720|gb|CP012066.1|5144236-5145348 gi|553895034|gb|CP006832.1|4706405-4707517 gi|553886202|gb|CP006831.1|4707490-4708602 gi|543879514|gb|CP006705.1|4485993-4487105 gi|110227054|gb|AE004091.2|4706410-4707522
ARG-ANNOT	Bla|OKP-A-10|AM051149|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-10:AM051149:1-861:861
CARD	Bla|OKP-A-10|AM051149|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051149|0-861|ARO:3002427|OKP-A-10 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-10|AM051149|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655079|emb|AM051149.1|1-861
Resfinder	Bla|OKP-A-10|AM051149|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-10_1_AM051149
Lahey	Bla|AJ634602|gene|betalactams|Class_A_betalactamases|TEM	CAG25427.1 AJ634602.1:8700-7840
NCBI	Bla|AJ634602|gene|betalactams|Class_A_betalactamases|TEM	gi|667483963|gb|KJ439039.1|35504-34644 gi|667483878|gb|KJ411925.1|35504-34644 gi|300116044|dbj|AB551787.1|1-861 gi|46019644|emb|AJ634602.1|8700-7840
CARD	CARD|phgb|AE004091.2|2503424-2503895|ARO:3000836|soxR|Multi-drug_resistance|MDR_regulator|SOXS|RequiresSNPConfirmation	@phgb|AE004091.2|2503424-2503895|ARO:3000836|soxR [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|AE004091.2|2503424-2503895|ARO:3000836|soxR|Multi-drug_resistance|MDR_regulator|SOXS|RequiresSNPConfirmation	gi|984361056|gb|CP008873.1|5050180-5050650 gi|984355403|gb|CP008872.1|3302808-3302338 gi|974359204|gb|CP008871.1|2776434-2776904 gi|974341323|gb|CP008868.1|4727325-4726855 gi|974327848|gb|CP008866.1|352878-353348 gi|974319461|gb|CP008865.1|6023264-6022794 gi|974298776|gb|CP008864.1|2454830-2454360 gi|974261848|gb|CP008858.1|2212965-2213435 gi|970332569|gb|CP013696.1|4668232-4667762 gi|946706141|emb|LN870292.1|3007218-3006748
NCBI	AGly|AF047479.2|gene10|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|213958578|gb|AF047479.2|1035-2087 gi|573013567|dbj|AP013064.1|28857-28601 gi|973585379|gb|KP054476.2|32479-32732
CARD	CARD|phgb|AM403715|302-854|ARO:3002857|dfrA26|Trimethoprim|Dihydrofolate_reductase|DFRA	@phgb|AM403715|302-854|ARO:3002857|dfrA26 [Escherichia coli]
NCBI	CARD|phgb|AM403715|302-854|ARO:3002857|dfrA26|Trimethoprim|Dihydrofolate_reductase|DFRA	gi|116000144|emb|AM403715.1|303-855
ARG-ANNOT	gi|345128596|gb|HQ875573.1|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-30:HQ875573:1-741:741;(Bla)IMP-38:HQ875573:1-741:741
CARD	gi|345128596|gb|HQ875573.1|betalactams|Class_B_betalactamases|IMP	@phgb|HQ875573|0-741|ARO:3002229|IMP-38 [Klebsiella pneumoniae]
Lahey	gi|345128596|gb|HQ875573.1|betalactams|Class_B_betalactamases|IMP	AEN75249.1 HQ875573.1:1-741
NCBI	gi|345128596|gb|HQ875573.1|betalactams|Class_B_betalactamases|IMP	gi|345128596|gb|HQ875573.1|1-741
Resfinder	gi|345128596|gb|HQ875573.1|betalactams|Class_B_betalactamases|IMP	blaIMP-38_1_HQ875573
NCBI	gi|591542892|gb|KJ207205.1|betalactams|Class_C_betalactamases|CMY	gi|591542892|gb|KJ207205.1|1040-2267
NCBI	976|DQ018711.1|DQ018711|Glycopeptides|VanA-type_resistance_protein|VANA	gi|50082942|gb|AY648698.1|1-1032 gi|66731642|gb|DQ018711.1|4129-5160
Resfinder	976|DQ018711.1|DQ018711|Glycopeptides|VanA-type_resistance_protein|VANA	VanPt_5_DQ018711
ARG-ANNOT	807|K00544.1|BACCAT86|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)Cat-86:K00544:145-807:663
CARD	807|K00544.1|BACCAT86|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|K00544|0-663|ARO:3002672|cat86 [Bacillus pumilus]
NCBI	807|K00544.1|BACCAT86|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|142634|gb|K00544.1|BACCAT86|145-807 gi|208074|gb|M14030.1|SYNBSUCATR|166-201
Resfinder	807|K00544.1|BACCAT86|Phenicol|Chloramphenicol_acetyltransferases|CATA	cat86_1_K00544
ARG-ANNOT	Bla|SHV-135|HQ637576|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-135:HQ637576:1-861:861
CARD	Bla|SHV-135|HQ637576|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|HQ637576|0-861|ARO:3001179|SHV-135 [Escherichia coli]
Lahey	Bla|SHV-135|HQ637576|1-861|861|betalactams|Class_A_betalactamases|SHV	ADR66517.1 HQ637576.1:1-861
NCBI	Bla|SHV-135|HQ637576|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|313510883|gb|HQ637576.1|1-861
Resfinder	Bla|SHV-135|HQ637576|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-135_1_HQ637576
NCBI	Elf|CP004022.1|gene2801|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|529186758|gb|CP004022.1|3061766-3060582 gi|172046403|emb|AM942759.1|3067116-3065932
NCBI	gi|160948456|emb|AM176556.2|betalactams|Class_A_betalactamases|SHV	gi|160948456|emb|AM176556.2|1-886
ARG-ANNOT	AGly|Aac6-31|AJ640197|2474-2992|519|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-31:AJ640197:2474-2992:519
CARD	AGly|Aac6-31|AJ640197|2474-2992|519|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AM283489|2655-3174|ARO:3002585|AAC(6')-31 [Pseudomonas putida]
NCBI	AGly|Aac6-31|AJ640197|2474-2992|519|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|772402180|gb|KP177455.1|1368-1886 gi|575771391|dbj|AB901040.1|561-1079 gi|346644633|dbj|AB625453.1|972-1490 gi|110350566|emb|AM283490.1|2451-2969 gi|110350560|emb|AM283489.1|2656-3174 gi|47155068|emb|AJ640197.1|2474-2992
Resfinder	AGly|Aac6-31|AJ640197|2474-2992|519|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-31_1_AJ640197
ARG-ANNOT	Bla|CEPA-44|U05885|556-1458|903|betalactams|Class_A_betalactamases|CEPA	(Bla)CEPA-44:U05885:556-1458:903
NCBI	Bla|CEPA-44|U05885|556-1458|903|betalactams|Class_A_betalactamases|CEPA	gi|458304|gb|U05885.1|BFU05885|557-1459
Resfinder	Bla|CEPA-44|U05885|556-1458|903|betalactams|Class_A_betalactamases|CEPA	cepA-44_1_U05885
CARD	CARD|phgb|JX042489|141-1002|ARO:3000890|TEM-19|betalactams|Class_A_betalactamases|TEM	@phgb|JX042489|141-1002|ARO:3000890|TEM-19 [Acinetobacter baumannii]
Lahey	CARD|phgb|JX042489|141-1002|ARO:3000890|TEM-19|betalactams|Class_A_betalactamases|TEM	AFN21551.1 JX042489.1:142-1002
NCBI	CARD|phgb|JX042489|141-1002|ARO:3000890|TEM-19|betalactams|Class_A_betalactamases|TEM	gi|393718030|gb|JX042489.1|142-1002
CARD	CARD|pvgb|NC_003197|4503969-4504293|ARO:3003383|Salmonella|Multi-drug_resistance|MDR_regulator|SOXS|RequiresSNPConfirmation	@pvgb|NC_003197|4503969-4504293|ARO:3003383|Salmonella serovars soxS mutants [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	CARD|pvgb|NC_003197|4503969-4504293|ARO:3003383|Salmonella|Multi-drug_resistance|MDR_regulator|SOXS|RequiresSNPConfirmation	gi|985427701|gb|CP007316.2|4361187-4361511 gi|985427300|gb|CP007315.2|4361179-4361503 gi|984745535|gb|CP007337.2|4361184-4361508 gi|981191958|emb|LN999997.1|827591-827267 gi|973795115|gb|AE006468.2|4503986-4504310 gi|971178605|gb|CP013097.1|4351649-4351973 gi|953773649|gb|CP013226.1|2712063-2711739 gi|953768973|gb|CP013222.1|2704317-2703993 gi|949877344|gb|CP012930.1|4478677-4479001 gi|949872475|gb|CP012924.1|4459383-4459707
CARD	Phe|NC_002096.2598307|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|NC_002096|1148-1796|ARO:3002670|cat [Staphylococcus aureus]
NCBI	Phe|NC_002096.2598307|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|1731451|gb|U38429.1|SAU38429|1149-1796
ARG-ANNOT	gi|225219825|gb|FJ790516.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-145:FJ790516:1288-2085:798
CARD	gi|225219825|gb|FJ790516.1|betalactams|Class_D_betalactamases|OXA	@phgb|FJ790516|1287-2085|ARO:3001804|OXA-145 [Pseudomonas aeruginosa]
Lahey	gi|225219825|gb|FJ790516.1|betalactams|Class_D_betalactamases|OXA	ACN85419.1 FJ790516.1:1288-2085
NCBI	gi|225219825|gb|FJ790516.1|betalactams|Class_D_betalactamases|OXA	gi|225219825|gb|FJ790516.1|1288-2085
Resfinder	gi|225219825|gb|FJ790516.1|betalactams|Class_D_betalactamases|OXA	blaOXA-145_1_FJ790516
ARG-ANNOT	gi|11096455|gb|AF219135.2|betalactams|Class_B_betalactamases|IND	(Bla)IND-4:AF219135::1-729:729
CARD	gi|11096455|gb|AF219135.2|betalactams|Class_B_betalactamases|IND	@phgb|AF219135|0-729|ARO:3002260|IND-4 [Chryseobacterium indologenes]
Lahey	gi|11096455|gb|AF219135.2|betalactams|Class_B_betalactamases|IND	AAG29765.2 AF219135.2:1-729
NCBI	gi|11096455|gb|AF219135.2|betalactams|Class_B_betalactamases|IND	gi|11096455|gb|AF219135.2|AF219135|1-729
Resfinder	gi|11096455|gb|AF219135.2|betalactams|Class_B_betalactamases|IND	blaIND-4_1_AF219135
ARG-ANNOT	gi|39932884|gb|AY445080.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-56:AY445080:1-801:801
CARD	gi|39932884|gb|AY445080.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY445080|0-801|ARO:3001795|OXA-56 [Pseudomonas aeruginosa]
Lahey	gi|39932884|gb|AY445080.1|betalactams|Class_D_betalactamases|OXA	AAR32651.1 AY445080.1:1-801
NCBI	gi|39932884|gb|AY445080.1|betalactams|Class_D_betalactamases|OXA	gi|937559777|gb|KT454971.1|370597-369797 gi|164521141|gb|DQ914960.2|2239-3039 gi|50313505|gb|AY660529.1|757-1557 gi|39932884|gb|AY445080.1|1-801
Resfinder	gi|39932884|gb|AY445080.1|betalactams|Class_D_betalactamases|OXA	blaOXA-56_1_AY660529
ARG-ANNOT	gi|58701169|gb|AY750908.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-65:AY750908:1-825:825
CARD	gi|58701169|gb|AY750908.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY750908|0-825|ARO:3001614|OXA-65 [Acinetobacter baumannii]
Lahey	gi|58701169|gb|AY750908.1|betalactams|Class_D_betalactamases|OXA	AAW81337.1 AY750908.1:1-825
NCBI	gi|58701169|gb|AY750908.1|betalactams|Class_D_betalactamases|OXA	gi|692328596|gb|CP009534.1|1635744-1634920 gi|675327552|gb|CP009257.1|457632-458456 gi|385654897|gb|JQ412185.1|1943-2767 gi|58701169|gb|AY750908.1|1-825
Resfinder	gi|58701169|gb|AY750908.1|betalactams|Class_D_betalactamases|OXA	blaOXA-65_1_AY750908
ARG-ANNOT	Bla|HERA-5|AJ536089|1-873|873|betalactams|Class_A_betalactamases|HERA	(Bla)HERA-5:AJ536089:1-873:873
NCBI	Bla|HERA-5|AJ536089|1-873|873|betalactams|Class_A_betalactamases|HERA	gi|27805133|emb|AJ536089.1|1-873
Resfinder	Bla|HERA-5|AJ536089|1-873|873|betalactams|Class_A_betalactamases|HERA	blaHERA-5_1_AJ536089
ARG-ANNOT	Bla|SHV-145|JX013655|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-145:JX013655:1-861:861
CARD	Bla|SHV-145|JX013655|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|JX013655|0-861|ARO:3001185|SHV-145 [Klebsiella pneumoniae]
Lahey	Bla|SHV-145|JX013655|1-861|861|betalactams|Class_A_betalactamases|SHV	AFN88952.1 JX013655.1:1-861
NCBI	Bla|SHV-145|JX013655|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|396586110|gb|JX013655.1|1-861
Resfinder	Bla|SHV-145|JX013655|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-145_1_JX013655
ARG-ANNOT	gi|396586112|gb|JX013656.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-34:JX013656:1-801:801
CARD	gi|396586112|gb|JX013656.1|betalactams|Class_B_betalactamases|VIM	@phgb|JX013656|0-801|ARO:3002304|VIM-34 [Klebsiella pneumoniae]
Lahey	gi|396586112|gb|JX013656.1|betalactams|Class_B_betalactamases|VIM	AFN88953.1 JX013656.1:1-801
NCBI	gi|396586112|gb|JX013656.1|betalactams|Class_B_betalactamases|VIM	gi|401891056|gb|JX185132.1|1058-1858 gi|396586112|gb|JX013656.1|1-801
Resfinder	gi|396586112|gb|JX013656.1|betalactams|Class_B_betalactamases|VIM	blaVIM-34_1_JX013656
ARG-ANNOT	Flq|QnrB23|FJ981622|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB23:FJ981622:37-681:645
CARD	Flq|QnrB23|FJ981622|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|FJ981622|0-681|ARO:3002738|QnrB23 [Citrobacter freundii]
NCBI	Flq|QnrB23|FJ981622|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695214226|ref|NG_036776.1|1-681
Resfinder	Flq|QnrB23|FJ981622|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB23_1_FJ981622
NCBI	gi|56554764|gb|AY847144.1|betalactams|Class_A_betalactamases|CTX	gi|56554764|gb|AY847144.1|82-962
NCBI	Flq|NC_008702.1.4606680|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|119668705|emb|AM406670.1|1146520-1149153
Lahey	1267|AB976602.1|AB976602|betalactams|Class_A_betalactamases|CTX	BAP18874.1 AB976602.1:136-1011
NCBI	1267|AB976602.1|AB976602|betalactams|Class_A_betalactamases|CTX	gi|668347727|dbj|AB976602.1|136-1011
CARD	CARD|phgb|EU408346|4825-5713|ARO:3002482|LRA-1|betalactams|Class_B_betalactamases|LRA	@phgb|EU408346|4825-5713|ARO:3002482|LRA-1 [uncultured bacterium BLR1]
NCBI	CARD|phgb|EU408346|4825-5713|ARO:3002482|LRA-1|betalactams|Class_B_betalactamases|LRA	gi|169647622|gb|EU408346.1|4826-5714
ARG-ANNOT	Bla|OKP-B-16|AM850918|25-885|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-16:AM850918:25-885:861
CARD	Bla|OKP-B-16|AM850918|25-885|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM850918|24-885|ARO:3002438|OKP-B-5 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-16|AM850918|25-885|861|betalactams|Class_A_betalactamases|OKP	gi|197724708|emb|AM850918.2|25-885
Resfinder	Bla|OKP-B-16|AM850918|25-885|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-16_1_AM850918
ARG-ANNOT	gi|23505685|gb|AY130284.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-75:AY130284:1-785:785
CARD	gi|23505685|gb|AY130284.1|betalactams|Class_A_betalactamases|TEM	@phgb|AY130284|0-785|ARO:3000941|TEM-75 [Klebsiella pneumoniae]
NCBI	gi|23505685|gb|AY130284.1|betalactams|Class_A_betalactamases|TEM	gi|23505685|gb|AY130284.1|1-785 gi|808157946|gb|KP870110.1|4250-4200
CARD	gi|537430798|gb|KF057029.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF057029|0-825|ARO:3001683|OXA-312 [Acinetobacter baumannii]
Lahey	gi|537430798|gb|KF057029.1|betalactams|Class_D_betalactamases|OXA	AGU69250.1 KF057029.1:1-825
NCBI	gi|537430798|gb|KF057029.1|betalactams|Class_D_betalactamases|OXA	gi|537430798|gb|KF057029.1|1-825
NCBI	Bla|NC_002516.2.877990|betalactams|Class_D_betalactamases|OXA	gi|974298776|gb|CP008864.1|5482818-5483606 gi|926451317|emb|LN871187.1|6219306-6220094 gi|745838743|gb|CP007399.1|2474938-2475726 gi|589338112|gb|CP006985.1|6465670-6466458 gi|589332184|gb|CP006984.1|6450687-6451475 gi|589326231|gb|CP006983.1|6468621-6469409 gi|589320215|gb|CP006982.1|6532730-6533518 gi|589314341|gb|CP006981.1|6409530-6410318 gi|589308385|gb|CP006980.1|6484966-6485754 gi|566561164|gb|CP006937.1|6491686-6492474
ARG-ANNOT	Bla|IND2a|AF219130|1-732|732|betalactams|Class_B_betalactamases|IND	(Bla)IND2a:AF219130::1-732:732;(Bla)IND-13:HM245381::57-788:732
CARD	Bla|IND2a|AF219130|1-732|732|betalactams|Class_B_betalactamases|IND	@phgb|AF219130|0-732|ARO:3002258|IND-2a [Chryseobacterium indologenes]
Lahey	Bla|IND2a|AF219130|1-732|732|betalactams|Class_B_betalactamases|IND	ADK25052.1 HM245381.1:57-788
NCBI	Bla|IND2a|AF219130|1-732|732|betalactams|Class_B_betalactamases|IND	gi|300510843|gb|HM245381.1|57-788 gi|11095175|gb|AF219130.1|AF219130|1-732
Resfinder	Bla|IND2a|AF219130|1-732|732|betalactams|Class_B_betalactamases|IND	blaIND-2a_4_AF219130
ARG-ANNOT	Tmt|Dfr22|AJ628423|325-822|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)Dfr22:AJ628423:325-822:498
NCBI	Tmt|Dfr22|AJ628423|325-822|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|970697516|gb|KT935445.1|33805-33308 gi|534310957|gb|KF525705.1|106-603 gi|300245053|gb|HM173356.1|1497-1994 gi|184216086|gb|EU622041.1|187-684 gi|46934850|emb|AJ628423.2|325-822 gi|695213116|ref|NG_036550.1|7840-8262 gi|238867174|gb|FJ976897.1|1-404
Resfinder	Tmt|Dfr22|AJ628423|325-822|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA22_1_HM173356
CARD	gi|597709737|emb|HG934763.1|betalactams|Class_A_betalactamases|TEM	@phgb|HG934763|0-861|ARO:3001394|TEM-217 [Enterobacter cloacae]
Lahey	gi|597709737|emb|HG934763.1|betalactams|Class_A_betalactamases|TEM	CDN33426.1 HG934763.1:1-861
NCBI	gi|597709737|emb|HG934763.1|betalactams|Class_A_betalactamases|TEM	gi|597709737|emb|HG934763.1|1-861
ARG-ANNOT	Bla|SHV-121|AB538449|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-121:AB538449:1-861:861;(Bla)SHV-136:HQ661362:72-932:861
CARD	Bla|SHV-121|AB538449|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|HQ661362|71-932|ARO:3001168|SHV-121 [Klebsiella pneumoniae]
Lahey	Bla|SHV-121|AB538449|1-861|861|betalactams|Class_A_betalactamases|SHV	ACV53157.1 GQ428198.1:48-908
NCBI	Bla|SHV-121|AB538449|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|338173764|gb|HQ661362.1|72-932 gi|283135093|dbj|AB538449.1|1-861 gi|257359514|gb|GQ428198.1|48-908
Resfinder	Bla|SHV-121|AB538449|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-121_1_GQ428198
ARG-ANNOT	CARD|phgb|AJ620678|0-753|ARO:3000845|GIM-1|betalactams|Class_B_betalactamases|GIM	(Bla)GIM-1:JF414726:394-1146:753
CARD	CARD|phgb|AJ620678|0-753|ARO:3000845|GIM-1|betalactams|Class_B_betalactamases|GIM	@phgb|AJ620678|0-753|ARO:3000845|GIM-1 [Pseudomonas aeruginosa]
Lahey	CARD|phgb|AJ620678|0-753|ARO:3000845|GIM-1|betalactams|Class_B_betalactamases|GIM	CAF05908.1 AJ620678.1:1041-1793
NCBI	CARD|phgb|AJ620678|0-753|ARO:3000845|GIM-1|betalactams|Class_B_betalactamases|GIM	gi|957761167|gb|KT440883.1|1541-2293 gi|953357758|gb|KT290957.1|402-1154 gi|953357751|gb|KT290956.1|886-1638 gi|953357745|gb|KT290955.1|402-1154 gi|953357739|gb|KT290954.1|402-1154 gi|953357733|gb|KT290953.1|402-1154 gi|953357725|gb|KT290952.1|402-1154 gi|953357712|gb|KT290950.1|402-1154 gi|617018994|gb|KJ420613.1|402-1154 gi|617018845|gb|KJ420612.1|406-1158
Resfinder	CARD|phgb|AJ620678|0-753|ARO:3000845|GIM-1|betalactams|Class_B_betalactamases|GIM	blaGIM-1_1_JF414726
ARG-ANNOT	1189|AJ243491.1|AJ243491|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-2:AB182996:1-741:741
CARD	1189|AJ243491.1|AJ243491|betalactams|Class_B_betalactamases|IMP	@phgb|AJ243491|0-741|ARO:3002193|IMP-2 [Acinetobacter baumannii]
Lahey	1189|AJ243491.1|AJ243491|betalactams|Class_B_betalactamases|IMP	CAB94707.1 AJ243491.1:539-1279
NCBI	1189|AJ243491.1|AJ243491|betalactams|Class_B_betalactamases|IMP	gi|49532985|dbj|AB182996.1|1-741 gi|8546572|emb|AJ243491.1|539-1279
Resfinder	1189|AJ243491.1|AJ243491|betalactams|Class_B_betalactamases|IMP	blaIMP-2_1_AJ243491
CARD	ACou|NC_002952.2859942|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	@pvgb|NC_002952|1417762-1419760|ARO:3003315|Staphylococcus aureus parE conferring resistance to fluoroquinolones [Staphylococcus aureus subsp. aureus MRSA252];@pvgb|NC_002952|1417762-1419760|ARO:3003671|Staphylococcus aureus parE conferring resistance to aminocoumarin [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	ACou|NC_002952.2859942|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|49240382|emb|BX571856.1|1417763-1419760
CARD	1081|AF294653.1|AF294653|Phenicol|Phenicol_efflux_pumps|CML	@phgb|AF294653|2749-4009|ARO:3002696|cmlA6 [Pseudomonas aeruginosa]
NCBI	1081|AF294653.1|AF294653|Phenicol|Phenicol_efflux_pumps|CML	gi|973715451|gb|CP013836.1|108114-106855 gi|666688170|gb|KJ463833.1|23054-24313 gi|636632003|gb|KJ575543.1|2792-4051 gi|595650110|gb|KJ002506.1|1774-3033 gi|524852998|gb|JX857539.1|1120-2379 gi|513127047|gb|KC759526.1|835-2094 gi|347602579|gb|JF806501.1|1373-114 gi|320091601|gb|HQ148722.1|1769-3028 gi|300391750|gb|HM175866.1|1709-2968 gi|695212119|ref|NG_036333.1|6339-7598
CARD	CARD|phgb|AL123456|1853605-1854388|ARO:3003060|tsnr|Thiostrepton|Thiostrepton_23S_rRNA_methyltransferases|TSNR	@phgb|AL123456|1853605-1854388|ARO:3003060|tsnr [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|phgb|AL123456|1853605-1854388|ARO:3003060|tsnr|Thiostrepton|Thiostrepton_23S_rRNA_methyltransferases|TSNR	gi|984950177|gb|CP010330.1|1855093-1855876 gi|984945858|gb|CP010329.1|1853627-1854410 gi|749193065|gb|CP007027.1|1853611-1854394 gi|737516150|dbj|AP014573.1|1858969-1859752 gi|690310687|gb|CP009480.1|1849126-1849909 gi|559794742|gb|CP003248.2|1853613-1854396 gi|492073345|gb|CP005387.1|1850589-1851372 gi|444893469|emb|AL123456.3|1853606-1854389 gi|148503909|gb|CP000611.1|1855124-1855907
NCBI	Sul|sul1_7_FJ715937|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|224814349|gb|FJ715937.1|7428-8267
Resfinder	Sul|sul1_7_FJ715937|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_7_FJ715937
CARD	CARD|phgb|AY047358|1710-2352|ARO:3003552|fusB|Fusidic_acid|Ribosomal_zinc-binding_protein|FUSB	@phgb|AY047358|1710-2352|ARO:3003552|fusB [Staphylococcus aureus]
NCBI	CARD|phgb|AY047358|1710-2352|ARO:3003552|fusB|Fusidic_acid|Ribosomal_zinc-binding_protein|FUSB	gi|943350259|dbj|AB930127.1|12803-13444 gi|929861413|gb|CP010403.1|1336-1977 gi|558695336|dbj|AB828060.1|12799-13440 gi|558695309|dbj|AB828059.1|13610-14251 gi|556039608|gb|CP004014.1|523384-522743 gi|364521258|gb|CP003193.1|1336-1977 gi|358440306|gb|JF808726.1|14516-15157 gi|358440280|gb|JF808725.1|15199-15840 gi|358356991|gb|JF777506.1|16007-16648 gi|119668677|emb|AM292600.1|16901-17542
Resfinder	CARD|phgb|AY047358|1710-2352|ARO:3003552|fusB|Fusidic_acid|Ribosomal_zinc-binding_protein|FUSB	fusB_1_AM292600
CARD	Bla|TEM-205_1_KC900516|betalactams|Class_A_betalactamases|TEM	@phgb|KC900516|0-858|ARO:3001382|TEM-205 [Pseudomonas aeruginosa]
Lahey	Bla|TEM-205_1_KC900516|betalactams|Class_A_betalactamases|TEM	AGZ20205.1 KC900516.1:1-858
NCBI	Bla|TEM-205_1_KC900516|betalactams|Class_A_betalactamases|TEM	gi|555947952|gb|KC900516.1|1-858
Resfinder	Bla|TEM-205_1_KC900516|betalactams|Class_A_betalactamases|TEM	blaTEM-205_1_KC900516
ARG-ANNOT	Bla|OKP-B-1|AJ635402|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-1:AJ635402:1-861:861
CARD	Bla|OKP-B-1|AJ635402|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AJ635402|0-861|ARO:3002434|OKP-B-1 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-1|AJ635402|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|76057844|emb|AJ635402.2|1-861
Resfinder	Bla|OKP-B-1|AJ635402|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-1_1_AM051150
ARG-ANNOT	Bla|IND-2|EF394439|1-732|732|betalactams|Class_B_betalactamases|IND	(Bla)IND-2:EF394439:1-732:732
NCBI	Bla|IND-2|EF394439|1-732|732|betalactams|Class_B_betalactamases|IND	gi|126571824|gb|EF394439.1|1-732
NCBI	Bla|SHV-1_17_FJ668799|betalactams|Class_A_betalactamases|SHV	gi|695220746|ref|NG_039544.1|77-937
Resfinder	Bla|SHV-1_17_FJ668799|betalactams|Class_A_betalactamases|SHV	blaSHV-1_17_FJ668799
ARG-ANNOT	Flq|QnrB40|JN166689|1-660|660|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB40:JN166689:1-660:660
CARD	Flq|QnrB40|JN166689|1-660|660|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN166689|0-660|ARO:3002755|QnrB40 [Citrobacter braakii]
NCBI	Flq|QnrB40|JN166689|1-660|660|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|342674042|gb|JN166689.1|1-660
Resfinder	Flq|QnrB40|JN166689|1-660|660|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB40_1_JN166689
NCBI	gi|530776686|emb|HG423149.1|betalactams|Class_A_betalactamases|CTX	gi|530776686|emb|HG423149.1|1-950
NCBI	gi|15705412|gb|AF395881.1|betalactams|Class_A_betalactamases|KPC	gi|908777676|gb|KT148595.1|14544-13585 gi|940785863|gb|KT362706.1|18921-19880 gi|940785863|gb|KT362706.1|33197-32238 gi|933686953|gb|KT378598.1|7208-8167 gi|933686943|gb|KT378597.1|7208-8167 gi|933686933|gb|KT378596.1|7110-8069 gi|910286593|gb|CP012163.1|7361-6402 gi|910286593|gb|CP012163.1|60160-59201 gi|902611595|gb|CP011978.1|61933-60974 gi|828971628|gb|CP011646.1|38232-37273 gi|828971542|gb|CP011645.1|61971-61012 gi|828921939|gb|CP011589.1|20801-21760
CARD	CARD|phgb|DQ212986|5984-7034|ARO:3002909|vanG|Glycopeptides|VanG-type_resistance_protein|VANG	@phgb|DQ212986|5984-7034|ARO:3002909|vanG [Enterococcus faecalis]
NCBI	CARD|phgb|DQ212986|5984-7034|ARO:3002909|vanG|Glycopeptides|VanG-type_resistance_protein|VANG	gi|762041216|gb|KF697366.1|38695-39745 gi|672937785|gb|KF686317.1|38695-39745 gi|692189312|gb|KF722997.1|848-1898 gi|674114364|gb|CP007573.1|764549-765599 gi|674107077|gb|CP007570.1|642805-643855 gi|77380191|gb|DQ212986.1|5985-7035 gi|33355827|gb|AY271782.1|21049-22099
CARD	940|AF028812.1|AF028812|Trimethoprim|Dihydrofolate_reductase|DFRF	@phgb|AF028812|392-887|ARO:3002867|dfrF [Enterococcus faecalis]
NCBI	940|AF028812.1|AF028812|Trimethoprim|Dihydrofolate_reductase|DFRF	gi|4103866|gb|AF028812.1|AF028812|393-887
CARD	CARD|phgb|AB709942|1194-1749|ARO:3003677|AAC6-PRIME-Iaj|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AB709942|1194-1749|ARO:3003677|AAC(6')-Iaj [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AB709942|1194-1749|ARO:3003677|AAC6-PRIME-Iaj|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|407726048|dbj|AB709942.1|1195-1749
NCBI	Tet|tetG_1_AJ276217|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	gi|15027120|emb|AJ276217.1|1-1140
CARD	Bla|LEN24_1_AM850914|betalactams|Class_A_betalactamases|LEN	@phgb|AM850914|30-891|ARO:3002471|LEN-24 [Klebsiella pneumoniae]
NCBI	Bla|LEN24_1_AM850914|betalactams|Class_A_betalactamases|LEN	gi|197724700|emb|AM850914.2|31-891
Resfinder	Bla|LEN24_1_AM850914|betalactams|Class_A_betalactamases|LEN	blaLEN24_1_AM850914
ARG-ANNOT	Gly|VanHA-Bc|Y15704|23-1054|1032|Glycopeptides|VanA-type_resistance_protein|VANA	(Gly)VanHA-Bc:Y15704:23-1054:1032
NCBI	Gly|VanHA-Bc|Y15704|23-1054|1032|Glycopeptides|VanA-type_resistance_protein|VANA	gi|6448487|emb|Y15704.1|23-1054
Resfinder	Gly|VanHA-Bc|Y15704|23-1054|1032|Glycopeptides|VanA-type_resistance_protein|VANA	VanH-A(Bc)_7_Y15704
CARD	CARD|pvgb|NC_002952|7004-9665|ARO:3003296|Staphylococcus|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	@pvgb|NC_002952|7004-9665|ARO:3003296|Staphylococcus aureus gyrA conferring resistance to fluoroquinolones [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	CARD|pvgb|NC_002952|7004-9665|ARO:3003296|Staphylococcus|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|974161314|gb|CP012018.1|6988-9649 gi|974158397|gb|CP012015.1|6988-9649 gi|974155539|gb|CP012013.1|6989-9650 gi|974152716|gb|CP012012.1|7005-9666 gi|974149849|gb|CP012011.1|7005-9666 gi|700315490|gb|CP009681.1|7004-9665 gi|520996365|gb|CP005288.1|7004-9665 gi|302749911|gb|CP002120.1|6489-9150 gi|269939526|emb|FN433596.1|7005-9666 gi|49240382|emb|BX571856.1|7005-9666
CARD	1074|FJ854362.1|FJ854362|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|FJ854362|1702-2257|ARO:3002576|AAC(6')-Ib3 [Acinetobacter baumannii]
NCBI	1074|FJ854362.1|FJ854362|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|787862679|gb|CP008707.1|30685-30131 gi|657224404|gb|KF056330.2|129149-129703 gi|604724082|gb|KJ131499.1|6874-7428 gi|478437738|gb|KC469284.1|1027-1581 gi|407731706|gb|JX023441.1|1039-1593 gi|345645209|gb|JN253503.1|1038-1592 gi|316308403|gb|HM451497.1|6873-7427 gi|310769860|gb|HM622145.1|1055-1609 gi|310769856|gb|HM622144.1|1056-1610 gi|240114397|gb|FJ854362.1|1703-2257
ARG-ANNOT	Bla|CTX-M-33|AY238472|13-888|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-33:AY238472:13-888:876
Lahey	Bla|CTX-M-33|AY238472|13-888|876|betalactams|Class_A_betalactamases|CTX	AAO88912.1 AY238472.1:888-13
NCBI	Bla|CTX-M-33|AY238472|13-888|876|betalactams|Class_A_betalactamases|CTX	gi|695209447|ref|NG_035830.1|888-13
ARG-ANNOT	Tet|TetR|HF545434|53576-54226|651|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	(Tet)TetR:HF545434:53576-54226:651
NCBI	Tet|TetR|HF545434|53576-54226|651|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|970698093|gb|KT988018.1|14644-13994 gi|974751143|gb|KU238092.1|6885-7535 gi|975007785|gb|CP010832.1|758-1408 gi|973710347|gb|CP013833.1|73840-73190 gi|954666075|gb|KT962845.1|15842-16492 gi|941350020|gb|KT163018.1|6064-6714 gi|966626646|gb|CP013657.1|127404-128054 gi|959153704|gb|CP012993.1|50452-51102 gi|959147947|gb|CP012988.1|42767-42117 gi|954171462|gb|KT151662.1|81376-82026
CARD	CARD|pvgb|Z70722|4202-6296|ARO:3003304|Mycobacterium|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	@pvgb|Z70722|4202-6296|ARO:3003304|Mycobacterium leprae gyrB conferring resistance to fluoroquinolone [Mycobacterium leprae]
NCBI	CARD|pvgb|Z70722|4202-6296|ARO:3003304|Mycobacterium|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	gi|219932450|emb|FM211192.1|5172-7266 gi|13092412|emb|AL583917.1|5172-7266 gi|2344819|emb|Z70722.1|4203-6297
NCBI	gi|11761377|dbj|D13304.2|KPNPRMOX1|betalactams|Class_C_betalactamases|MOX	gi|695200064|ref|NG_035368.1|1-1407 gi|573013567|dbj|AP013064.1|27485-27603 gi|573013567|dbj|AP013064.1|29740-29858 gi|695214120|ref|NG_036738.1|6267-6384 gi|695214108|ref|NG_036737.1|5356-5473 gi|695197690|ref|NG_034779.1|51-168 gi|13591818|gb|AF357599.1|1-71 gi|14318308|gb|AF381618.1|1-71 gi|13591814|gb|AF357597.1|1-71
NCBI	MLS|vgaA_LC_1_GQ891882|MLS|ABC_transporter|VGA	gi|695214537|ref|NG_036833.1|48-1616 gi|641688293|emb|HG799495.1|70852-70880
Resfinder	MLS|vgaA_LC_1_GQ891882|MLS|ABC_transporter|VGA	vga(A)LC_1_GQ891882
ARG-ANNOT	Bla|SHV-110|HQ877614|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-110:HQ877614:1-861:861
CARD	Bla|SHV-110|HQ877614|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|HQ877615|0-861|ARO:3001159|SHV-110 [Klebsiella pneumoniae]
Lahey	Bla|SHV-110|HQ877614|1-861|861|betalactams|Class_A_betalactamases|SHV	AEK48094.1 HQ877615.1:1-861
NCBI	Bla|SHV-110|HQ877614|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|569550235|gb|CP003999.1|2762036-2762896 gi|340523213|gb|HQ877614.1|1-861
Resfinder	Bla|SHV-110|HQ877614|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-110_1_HQ877615
ARG-ANNOT	gi|126013510|gb|EF415650.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-24:EF415650:1-1146:1146
CARD	gi|126013510|gb|EF415650.1|betalactams|Class_C_betalactamases|CMY	@phgb|EF415650|0-1146|ARO:3002035|CMY-24 [Escherichia coli]
Lahey	gi|126013510|gb|EF415650.1|betalactams|Class_C_betalactamases|CMY	ABN69070.1 EF415650.1:1-1146
NCBI	gi|126013510|gb|EF415650.1|betalactams|Class_C_betalactamases|CMY	gi|695212430|ref|NG_036416.1|1-1146
Resfinder	gi|126013510|gb|EF415650.1|betalactams|Class_C_betalactamases|CMY	blaCMY-24_1_EF415650
NCBI	Rif|CP000034.1|gene3741|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|81239530|gb|CP000034.1|3477434-3473406
NCBI	680|unknown_id|unknown_name|MLS|23S_rRNA_methyltransferases|RLMH	gi|941146344|gb|CP007676.1|33712-34191 gi|941142962|gb|CP007672.1|33712-34191 gi|941139768|gb|CP007657.1|33712-34191 gi|899756207|gb|CP012119.1|1891971-1891492 gi|899750970|gb|CP012120.1|915424-914945 gi|828461663|gb|CP007674.1|33712-34191 gi|828444881|gb|CP007670.1|33698-34177 gi|743649775|gb|CP010300.1|33712-34191 gi|743624649|gb|CP010299.1|33712-34191 gi|743618732|gb|CP010298.1|33712-34191
ARG-ANNOT	Bla|OXA-107|EF650033|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-107:EF650033:1-825:825
CARD	Bla|OXA-107|EF650033|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|EF650033|0-825|ARO:3001638|OXA-107 [Acinetobacter baumannii A424]
Lahey	Bla|OXA-107|EF650033|1-825|825|betalactams|Class_D_betalactamases|OXA	ABV31687.1 EF650033.1:1-825
NCBI	Bla|OXA-107|EF650033|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|157285900|gb|EF650033.1|1-825
Resfinder	Bla|OXA-107|EF650033|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-107_1_EF650033
NCBI	Sul|sul1_8_JN581942|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|943457735|gb|KT818627.1|96560-97396 gi|943457735|gb|KT818627.1|158153-158989 gi|950836029|gb|KT897470.1|1833-2669 gi|829596799|gb|KR351290.1|89181-88345 gi|746616805|gb|KJ187752.1|78174-79010 gi|742994109|gb|CP010391.1|46165-45329 gi|667713574|gb|CP006801.1|42395-41559 gi|662716651|gb|CP008824.1|205800-206636 gi|660573358|gb|CP008790.1|157279-158115 gi|640855459|gb|CP007732.1|158132-158968 gi|619739382|gb|CP007558.1|158121-158957
Resfinder	Sul|sul1_8_JN581942|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_8_JN581942
NCBI	83|JQ768046.1|JQ768046|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|388890562|gb|JQ768046.1|7033-7764
ARG-ANNOT	Bla|OXY2-6|AY077485|184-1056|870|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-6:AY077485:184-1056:870
CARD	Bla|OXY2-6|AY077485|184-1056|870|betalactams|Class_A_betalactamases|OXY	@phgb|AY077485|183-1056|ARO:3002401|OXY-2-6 [Klebsiella oxytoca]
NCBI	Bla|OXY2-6|AY077485|184-1056|870|betalactams|Class_A_betalactamases|OXY	gi|32130554|gb|AY077485.2|184-1056
Resfinder	Bla|OXY2-6|AY077485|184-1056|870|betalactams|Class_A_betalactamases|OXY	blaOXY-2-6_6_AY077485
NCBI	Bla|SHV-122_1_HM751103|betalactams|Class_A_betalactamases|SHV	gi|313766533|gb|HM751103.1|1-864
Resfinder	Bla|SHV-122_1_HM751103|betalactams|Class_A_betalactamases|SHV	blaSHV-122_1_HM751103
CARD	CARD|pvgb|CP001918|235165-236350|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP001918|235165-236350|ARO:3001312|elfamycin resistant EF-Tu [Enterobacter cloacae subsp. cloacae ATCC 13047]
NCBI	CARD|pvgb|CP001918|235165-236350|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|295054830|gb|CP001918.1|235166-236351
ARG-ANNOT	AGly|Aph3-dprime-Ic|DQ336355|603-1367|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	(AGly)Aph3''Ic:DQ336355:603-1367:816
CARD	AGly|Aph3-dprime-Ic|DQ336355|603-1367|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	@phgb|DQ336355|602-1367|ARO:3002640|APH(3'')-Ic [Mycobacterium fortuitum]
NCBI	AGly|Aph3-dprime-Ic|DQ336355|603-1367|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|84993815|gb|DQ336355.1|603-1367
Resfinder	AGly|Aph3-dprime-Ic|DQ336355|603-1367|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	aph(3'')-Ic_1_DQ336355
CARD	CARD|phgb|NC_011595|1249018-1249348|ARO:3000768|abeS|Multi-drug_resistance|Multi-drug_efflux_pumps|ABES	@phgb|NC_011595|1249018-1249348|ARO:3000768|abeS [Acinetobacter baumannii AB307-0294]
NCBI	CARD|phgb|NC_011595|1249018-1249348|ARO:3000768|abeS|Multi-drug_resistance|Multi-drug_efflux_pumps|ABES	gi|939559781|gb|CP012952.1|1390785-1391115 gi|787858845|gb|CP008706.1|1355706-1356036 gi|751410783|gb|CP010781.1|2605764-2605434 gi|213985689|gb|CP001172.1|1249019-1249349 gi|213054530|gb|CP001182.1|2744320-2743990 gi|169147133|emb|CU459141.1|1265412-1265742 gi|88758821|emb|CT025799.2|330-1 gi|226430858|gb|FJ843079.1|327-1
ARG-ANNOT	gi|227018497|gb|FJ873739.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-88:FJ873739:1-876:876
CARD	gi|227018497|gb|FJ873739.1|betalactams|Class_A_betalactamases|CTX	@phgb|FJ873739|0-875|ARO:3001948|CTX-M-88 [Salmonella enterica subsp. enterica serovar Infantis]
Lahey	gi|227018497|gb|FJ873739.1|betalactams|Class_A_betalactamases|CTX	ACP18863.1 FJ873739.1:1-875
NCBI	gi|227018497|gb|FJ873739.1|betalactams|Class_A_betalactamases|CTX	gi|227018497|gb|FJ873739.1|1-875
Resfinder	gi|227018497|gb|FJ873739.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-88_1_FJ873739
ARG-ANNOT	Bla|TEM-33|GU371926|50305-51165|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-33:GU371926:50305-51165:861
Lahey	Bla|TEM-33|GU371926|50305-51165|861|betalactams|Class_A_betalactamases|TEM	ADL13944.1 GU371926.1:51165-50305
NCBI	Bla|TEM-33|GU371926|50305-51165|861|betalactams|Class_A_betalactamases|TEM	gi|302310020|gb|GU371926.1|51165-50305
Resfinder	Bla|TEM-33|GU371926|50305-51165|861|betalactams|Class_A_betalactamases|TEM	blaTEM-33_1_GU371926
NCBI	Bla|FJ785625.1|gene1|betalactams|Class_A_betalactamases|OXY	gi|257136309|gb|FJ785625.1|70-1001
NCBI	gi|496632|emb|X78117.1|betalactams|Class_C_betalactamases|CMY	gi|496632|emb|X78117.1|142-1370
CARD	Phe|X53797.1|gene1|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|X53797|133-775|ARO:3002684|catII [Haemophilus influenzae]
NCBI	Phe|X53797.1|gene1|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|95114360|gb|DQ489998.1|1-642 gi|43578|emb|X53797.1|134-775
CARD	MLS|ermB_12_U18931|MLS|23S_rRNA_methyltransferases|ERMB	@phgb|Y00116|261-999|ARO:3000375|ErmB [Enterococcus faecalis]
NCBI	MLS|ermB_12_U18931|MLS|23S_rRNA_methyltransferases|ERMB	gi|974994122|gb|KR997561.1|5521-4784 gi|959099187|gb|KT953380.1|6282-7019 gi|612487836|gb|KJ395591.1|6876-6139 gi|762007349|gb|KP057690.1|7-744 gi|762007346|gb|KP057689.1|7-744 gi|749389159|gb|KJ645709.1|30891-31628 gi|700587954|gb|KM521211.1|6469-5732 gi|662240749|emb|LK933416.1|32856-33593 gi|662030451|emb|LK932404.1|1080-343 gi|662026309|emb|LK932518.1|1092-355
Resfinder	MLS|ermB_12_U18931|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_12_U18931
CARD	CARD|phgb|NC_002163|336915-337548|ARO:3000526|cmeR|Multi-drug_resistance|MDR_regulator|CMER	@phgb|NC_002163|336915-337548|ARO:3000526|cmeR [Campylobacter jejuni subsp. jejuni NCTC 11168]
NCBI	CARD|phgb|NC_002163|336915-337548|ARO:3000526|cmeR|Multi-drug_resistance|MDR_regulator|CMER	gi|938159898|gb|CP012696.1|338328-338961 gi|780862670|gb|CP003871.3|336715-337348 gi|756014142|gb|CP010307.1|339072-339705 gi|736041472|gb|CP010058.1|337214-337847 gi|690551456|gb|CP006729.2|375817-376450 gi|690545238|gb|CP006709.2|375818-376451 gi|690532631|gb|CP006708.2|337263-337896 gi|690532129|gb|CP006707.2|375817-376450 gi|589078008|gb|CP006689.1|336913-337546 gi|589076343|gb|CP006688.1|336911-337544
ARG-ANNOT	Bla|TEM-95|AJ308558|124-1084|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-95:AJ308558:124-1084:861
CARD	Bla|TEM-95|AJ308558|124-1084|861|betalactams|Class_A_betalactamases|TEM	@phgb|AJ308558|181-1042|ARO:3000962|TEM-95 [Escherichia coli]
Lahey	Bla|TEM-95|AJ308558|124-1084|861|betalactams|Class_A_betalactamases|TEM	CAC67290.1 AJ308558.1:182-1042
NCBI	Bla|TEM-95|AJ308558|124-1084|861|betalactams|Class_A_betalactamases|TEM	gi|15485218|emb|AJ308558.1|182-1042
Resfinder	Bla|TEM-95|AJ308558|124-1084|861|betalactams|Class_A_betalactamases|TEM	blaTEM-95_1_AJ308558
NCBI	gi|15721850|gb|AY037778.1|betalactams|Class_A_betalactamases|SHV	gi|15721850|gb|AY037778.1|92-1067
ARG-ANNOT	MLS|ErmG|M15332|672-1406|735|MLS|23S_rRNA_methyltransferases|ERMG	(MLS)ErmG:M15332:672-1406:735
CARD	MLS|ErmG|M15332|672-1406|735|MLS|23S_rRNA_methyltransferases|ERMG	@phgb|M15332|0-735|ARO:3000522|ErmG [Lysinibacillus sphaericus]
NCBI	MLS|ErmG|M15332|672-1406|735|MLS|23S_rRNA_methyltransferases|ERMG	gi|953830676|gb|CP013196.1|3904682-3903948 gi|939198277|gb|CP010064.1|709381-710115 gi|939198274|gb|CP010061.1|704698-705432 gi|939198273|gb|CP010060.1|743769-744503 gi|378937014|gb|CP003351.1|1610351-1609617 gi|142881|gb|M15332.1|BACERMG|672-1406
Resfinder	MLS|ErmG|M15332|672-1406|735|MLS|23S_rRNA_methyltransferases|ERMG	erm(G)_1_M15332
ARG-ANNOT	Flq|Qnr-AS|FM178379|1699484-1700140|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRC	(Flq)Qnr-AS:FM178379:1699484-1700140:657
NCBI	Flq|Qnr-AS|FM178379|1699484-1700140|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRC	gi|208007585|emb|FM178379.1|1700140-1699484
ARG-ANNOT	Bla|TEM-30|AJ437107|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-30:AJ437107:209-1069:861
CARD	Bla|TEM-30|AJ437107|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AJ437107|208-1069|ARO:3000900|TEM-30 [Escherichia coli]
Lahey	Bla|TEM-30|AJ437107|209-1069|861|betalactams|Class_A_betalactamases|TEM	CAD24670.1 AJ437107.1:209-1069
NCBI	Bla|TEM-30|AJ437107|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|25900616|emb|AJ437107.1|209-1069
Resfinder	Bla|TEM-30|AJ437107|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-30_1_AJ437107
NCBI	Bla|SHV-11_5_GQ407117|betalactams|Class_A_betalactamases|SHV	gi|256862159|gb|GQ389702.1|1-861
Resfinder	Bla|SHV-11_5_GQ407117|betalactams|Class_A_betalactamases|SHV	blaSHV-11_5_GQ407117
CARD	ACou|AF170880.4|gene1|Aminocoumarins|Aminocoumarin_efflux_pump|NOVA	@phgb|AF170880|0-1848|ARO:3002522|novA [Streptomyces niveus]
NCBI	ACou|AF170880.4|gene1|Aminocoumarins|Aminocoumarin_efflux_pump|NOVA	gi|385203109|gb|AF170880.4|1-1848
ARG-ANNOT	Bla|OXA-14|L38523|1-775|775|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-14:L38523:1-775:775
CARD	Bla|OXA-14|L38523|1-775|775|betalactams|Class_D_betalactamases|OXA	@phgb|L38523|0-774|ARO:3001409|OXA-14 [Pseudomonas aeruginosa]
NCBI	Bla|OXA-14|L38523|1-775|775|betalactams|Class_D_betalactamases|OXA	gi|617018845|gb|KJ420612.1|1848-2622 gi|602481|gb|L38523.1|PSEOXA14A|1-775
Resfinder	Bla|OXA-14|L38523|1-775|775|betalactams|Class_D_betalactamases|OXA	blaOXA-14_1_L38523
ARG-ANNOT	gi|56181495|gb|AY826417.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-136:AY826417:1-861:861
CARD	gi|56181495|gb|AY826417.1|betalactams|Class_A_betalactamases|TEM	@phgb|AY826417|0-861|ARO:3001000|TEM-136 [Klebsiella pneumoniae]
Lahey	gi|56181495|gb|AY826417.1|betalactams|Class_A_betalactamases|TEM	AAV83795.1 AY826417.1:1-861
NCBI	gi|56181495|gb|AY826417.1|betalactams|Class_A_betalactamases|TEM	gi|56181495|gb|AY826417.1|1-861
Resfinder	gi|56181495|gb|AY826417.1|betalactams|Class_A_betalactamases|TEM	blaTEM-136_1_AY826417
NCBI	Flq|NC_002516.2.882800|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|1956640-1959411 gi|553895034|gb|CP006832.1|3559193-3556422 gi|553886202|gb|CP006831.1|3559193-3556422 gi|543879514|gb|CP006705.1|3338780-3336009 gi|110227054|gb|AE004091.2|3559198-3556427 gi|459928|gb|L29417.1|PSEGAS|265-3036
CARD	CARD|pvgb|CP000647|489264-489915|ARO:3003373|Klebsiella|Multi-drug_resistance|MDR_regulator|ACRR|RequiresSNPConfirmation	@pvgb|CP000647|489264-489915|ARO:3003373|Klebsiella pneumoniae acrR mutant resulting in high level antibiotic resistance [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
NCBI	CARD|pvgb|CP000647|489264-489915|ARO:3003373|Klebsiella|Multi-drug_resistance|MDR_regulator|ACRR|RequiresSNPConfirmation	gi|979522909|gb|CP014008.1|1249792-1250443 gi|975895720|gb|CP014004.1|2369310-2368659 gi|960865004|gb|CP012043.1|1490755-1491406 gi|940656576|gb|CP012883.1|3838069-3838720 gi|937292495|gb|CP012753.1|2380702-2380051 gi|820949075|gb|CP011421.1|488918-489569 gi|815976342|gb|CP011313.1|3971591-3970940 gi|743569396|gb|CP006722.1|4041324-4040673 gi|742679781|gb|CP006738.1|4014409-4013758 gi|719628246|gb|CP009461.1|3615412-3614761
NCBI	gi|56554766|gb|AY847145.1|betalactams|Class_A_betalactamases|CTX	gi|56554766|gb|AY847145.1|82-962
NCBI	Flq|NC_009487.5169058|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|974697948|dbj|AP017320.1|7002-9671 gi|760495145|gb|CP010944.1|2675556-2678225 gi|760491253|gb|CP010943.1|2679692-2682361 gi|748807120|gb|CP010526.1|7005-9674 gi|408436493|emb|HE579073.1|7005-9674 gi|408434508|emb|HE579071.1|7005-9674 gi|408432519|emb|HE579069.1|7005-9674 gi|408430526|emb|HE579067.1|7005-9674 gi|408428537|emb|HE579065.1|7005-9674 gi|408426549|emb|HE579063.1|7005-9674
ARG-ANNOT	Gly|VanTc4|EU151753|1647-3749|2103|Glycopeptides|VanC-type_resistance_protein|VANTC	(Gly)VanTc4:EU151753:1647-3749:2103
NCBI	Gly|VanTc4|EU151753|1647-3749|2103|Glycopeptides|VanC-type_resistance_protein|VANTC	gi|161779851|gb|EU151753.1|1647-3749
Resfinder	Gly|VanTc4|EU151753|1647-3749|2103|Glycopeptides|VanC-type_resistance_protein|VANTC	VanT-C_3_EU151753
NCBI	gi|32442314|gb|AY259119.1|betalactams|Class_A_betalactamases|SHV	gi|32442314|gb|AY259119.1|117-1092
ARG-ANNOT	Flq|QnrB35|JN173057|2307-2951|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB35:JN173057:2307-2951:645
CARD	Flq|QnrB35|JN173057|2307-2951|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN173057|2306-2951|ARO:3002750|QnrB35 [Citrobacter freundii]
NCBI	Flq|QnrB35|JN173057|2307-2951|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|341873892|gb|JN173057.1|2307-2951
Resfinder	Flq|QnrB35|JN173057|2307-2951|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB35_1_JN173057
ARG-ANNOT	Bla|CTX-M-86|FJ214369|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-86:FJ214369:1-876:876
CARD	Bla|CTX-M-86|FJ214369|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|FJ214369|0-876|ARO:3001946|CTX-M-86 [Salmonella enterica subsp. enterica serovar Agona]
Lahey	Bla|CTX-M-86|FJ214369|1-876|876|betalactams|Class_A_betalactamases|CTX	ACI29348.1 FJ214369.1:1-876
NCBI	Bla|CTX-M-86|FJ214369|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|208503082|gb|FJ214369.1|1-876
Resfinder	Bla|CTX-M-86|FJ214369|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-86_1_FJ214369
CARD	CARD|pvgb|AF335467|36-1164|ARO:3003385|Enterobacter|Multi-drug_resistance|MDR_mutant_porin_proteins|omp36|RequiresSNPConfirmation	@pvgb|AF335467|36-1164|ARO:3003385|Enterobacter aerogenes omp36 mutants [Enterobacter aerogenes]
NCBI	CARD|pvgb|AF335467|36-1164|ARO:3003385|Enterobacter|Multi-drug_resistance|MDR_mutant_porin_proteins|omp36|RequiresSNPConfirmation	gi|334732565|gb|CP002824.1|5154956-5153829 gi|12963450|gb|AF335467.1|37-1164
NCBI	Tet|tetO_2_M20925|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETO	gi|153116|gb|M20925.1|STATETOSM|183-2102
Resfinder	Tet|tetO_2_M20925|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETO	tet(O)_2_M20925
CARD	CARD|phgb|U00096|4567286-4568519|ARO:3001214|mdtM|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTC	@phgb|U00096|4567286-4568519|ARO:3001214|mdtM [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|4567286-4568519|ARO:3001214|mdtM|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTC	gi|985000614|gb|CP014225.1|2764376-2765609 gi|975048878|gb|CP013962.1|2227680-2228913 gi|958627747|gb|CP013253.1|3436810-3435577 gi|958612453|gb|CP013048.1|4274800-4273567 gi|939732440|gb|CP011343.2|4547291-4548524 gi|939731527|gb|CP011342.2|4547977-4549210 gi|937526251|gb|CP012870.1|74366-73133 gi|937521852|gb|CP012869.1|74366-73133 gi|937517453|gb|CP012868.1|74366-73133 gi|932857508|emb|LN877770.1|367958-369191
ARG-ANNOT	Bla|CTX-M-23|AF488377|63-938|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-23:AF488377:63-938:876
CARD	Bla|CTX-M-23|AF488377|63-938|876|betalactams|Class_A_betalactamases|CTX	@phgb|AF488377|62-938|ARO:3001885|CTX-M-23 [Escherichia coli]
Lahey	Bla|CTX-M-23|AF488377|63-938|876|betalactams|Class_A_betalactamases|CTX	AAL99990.1 AF488377.1:63-938
NCBI	Bla|CTX-M-23|AF488377|63-938|876|betalactams|Class_A_betalactamases|CTX	gi|19852069|gb|AF488377.1|63-938
Resfinder	Bla|CTX-M-23|AF488377|63-938|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-23_1_AF488377
ARG-ANNOT	Bla|IND-6|AM087455|229-1011|720|betalactams|Class_B_betalactamases|IND	(Bla)IND-6:AM087455:229-1011:720
CARD	Bla|IND-6|AM087455|229-1011|720|betalactams|Class_B_betalactamases|IND	@phgb|AM087455|291-1011|ARO:3002262|IND-6 [Chryseobacterium indologenes]
Lahey	Bla|IND-6|AM087455|229-1011|720|betalactams|Class_B_betalactamases|IND	CAJ32373.2 AM087455.2:292-1011
NCBI	Bla|IND-6|AM087455|229-1011|720|betalactams|Class_B_betalactamases|IND	gi|215406556|emb|AM087455.2|292-1011
Resfinder	Bla|IND-6|AM087455|229-1011|720|betalactams|Class_B_betalactamases|IND	blaIND-6_1_AM087455
NCBI	gi|372864060|gb|JQ029959.1|betalactams|Class_A_betalactamases|SHV	gi|372864060|gb|JQ029959.1|1-890 gi|544280853|gb|KF211414.1|1123-2011
CARD	Mdr|NC_002516.2.881079|Multi-drug_resistance|MDR_regulator|NFXB	@phgb|NC_002516|5155560-5156124|ARO:3000820|nfxB [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.881079|Multi-drug_resistance|MDR_regulator|NFXB	gi|974341323|gb|CP008868.1|522833-523396 gi|974335511|gb|CP008867.1|1364848-1365411 gi|974298776|gb|CP008864.1|6685712-6685149 gi|974282928|gb|CP008861.1|4999013-4998450 gi|927993303|gb|CP012679.1|5381564-5382127 gi|927226644|gb|CP004054.2|5367505-5368068 gi|926451317|emb|LN871187.1|5155552-5156115 gi|557709751|gb|CP004055.1|2802045-2802608 gi|553895034|gb|CP006832.1|5155556-5156119 gi|553886202|gb|CP006831.1|5156641-5157204
CARD	Fos|fosB_1_X54227|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	@phgb|X54227|713-1133|ARO:3000172|FosB [Staphylococcus epidermidis]
NCBI	Fos|fosB_1_X54227|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	gi|695196534|ref|NG_034445.1|714-1133
Resfinder	Fos|fosB_1_X54227|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	fosB_1_X54227
ARG-ANNOT	Tet|Tet-31|AJ250203|1651-2883|1233|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET31	(Tet)Tet-31:AJ250203:1651-2883:1233
CARD	Tet|Tet-31|AJ250203|1651-2883|1233|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET31	@phgb|AJ250203|1650-2883|ARO:3000476|tet31 [Aeromonas salmonicida subsp. salmonicida]
NCBI	Tet|Tet-31|AJ250203|1651-2883|1233|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET31	gi|16151345|emb|AJ250203.1|1651-2883
Resfinder	Tet|Tet-31|AJ250203|1651-2883|1233|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET31	tet(31)_2_AJ250203
NCBI	Bla|CTX-M-24_8_EF374096|betalactams|Class_A_betalactamases|CTX	gi|668347740|dbj|AB976606.1|145-1020 gi|125634071|gb|EF374096.1|1-876
Resfinder	Bla|CTX-M-24_8_EF374096|betalactams|Class_A_betalactamases|CTX	blaCTX-M-24_8_EF374096
ARG-ANNOT	CARD|phgb|AY234334|0-846|ARO:3000600|Erm34|MLS|23S_rRNA_methyltransferases|ERM	(MLS)Erm34:AY234334:355-1200:846
CARD	CARD|phgb|AY234334|0-846|ARO:3000600|Erm34|MLS|23S_rRNA_methyltransferases|ERM	@phgb|AY234334|0-846|ARO:3000600|Erm(34) [Bacillus clausii]
NCBI	CARD|phgb|AY234334|0-846|ARO:3000600|Erm34|MLS|23S_rRNA_methyltransferases|ERM	gi|37359457|gb|AY234334.1|355-1200
Resfinder	CARD|phgb|AY234334|0-846|ARO:3000600|Erm34|MLS|23S_rRNA_methyltransferases|ERM	erm(34)_1_AY234334
ARG-ANNOT	MLS|ErmQ|L22689|262-1035|774|MLS|23S_rRNA_methyltransferases|ERMQ	(MLS)ErmQ:L22689:262-1035:774
CARD	MLS|ErmQ|L22689|262-1035|774|MLS|23S_rRNA_methyltransferases|ERMQ	@phgb|L22689|261-1035|ARO:3000593|ErmQ [Clostridium perfringens]
NCBI	MLS|ErmQ|L22689|262-1035|774|MLS|23S_rRNA_methyltransferases|ERMQ	gi|457207|gb|L22689.1|CLOERMQ|262-1035
Resfinder	MLS|ErmQ|L22689|262-1035|774|MLS|23S_rRNA_methyltransferases|ERMQ	erm(Q)_1_L22689
ARG-ANNOT	Flq|QnrB25|HQ172108|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB25:HQ172108:1-645:645
CARD	Flq|QnrB25|HQ172108|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HQ172108|0-645|ARO:3002740|QnrB25 [Citrobacter freundii]
NCBI	Flq|QnrB25|HQ172108|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224878|ref|NG_041178.1|1-645
Resfinder	Flq|QnrB25|HQ172108|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB25_1_HQ172108
CARD	CARD|phgb|AY044436|1435-2311|ARO:3001878|CTX-M-15|betalactams|Class_A_betalactamases|CTX	@phgb|AY044436|1435-2311|ARO:3001878|CTX-M-15 [Escherichia coli]
NCBI	CARD|phgb|AY044436|1435-2311|ARO:3001878|CTX-M-15|betalactams|Class_A_betalactamases|CTX	gi|970698242|gb|KT988020.1|10375-9499 gi|970698242|gb|KT988020.1|17786-16910 gi|970698221|gb|KT988019.1|2598-1722 gi|970698093|gb|KT988018.1|8263-7387 gi|975900838|gb|CP014005.1|47694-48570 gi|973710528|gb|CP013835.1|1786952-1786076 gi|973710528|gb|CP013835.1|3414336-3415212 gi|973710528|gb|CP013835.1|4537256-4538132 gi|971339514|gb|CP006662.2|48003-47127 gi|971338783|gb|CP006659.2|5407907-5408783 gi|943457735|gb|KT818627.1|77729-78605 gi|943457735|gb|KT818627.1|139320-140196 gi|970568188|dbj|LC107628.1|178-1054 gi|966626646|gb|CP013657.1|137212-136336
NCBI	Mdr|NC_002952.2859858|Multi-drug_resistance|MDR_regulator|ARLR	gi|703576232|gb|CP009554.1|1461876-1461217 gi|701162461|emb|LN626917.1|989540-990199 gi|685631213|gb|CP009361.1|1414495-1413836 gi|532126991|gb|CP002388.1|1357486-1356827 gi|49240382|emb|BX571856.1|1488321-1487662
ARG-ANNOT	Bla|TEM-47|Y10279|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-47:Y10279:1-861:861
CARD	Bla|TEM-47|Y10279|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|Y10279|0-861|ARO:3000916|TEM-47 [Klebsiella pneumoniae]
Lahey	Bla|TEM-47|Y10279|1-861|861|betalactams|Class_A_betalactamases|TEM	CAA71322.1 Y10279.1:1-861
NCBI	Bla|TEM-47|Y10279|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|2765066|emb|Y10279.1|1-861
Resfinder	Bla|TEM-47|Y10279|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-47_1_Y10279
CARD	CARD|phgb|EU418913|16-877|ARO:3001158|SHV-109|betalactams|Class_A_betalactamases|SHV	@phgb|EU418913|16-877|ARO:3001158|SHV-109 [Klebsiella pneumoniae]
NCBI	CARD|phgb|EU418913|16-877|ARO:3001158|SHV-109|betalactams|Class_A_betalactamases|SHV	gi|221149271|gb|EU418913.1|17-878
ARG-ANNOT	304|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET35	(Tet)Tet-35:AF353562:2213-3322:1110
NCBI	304|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET35	gi|13655507|gb|AF353562.1|3322-2213
CARD	MLS|ereB_1_A15097|MLS|Macrolide_esterases|EREB	@phgb|A15097|382-1642|ARO:3000363|EreB [Escherichia coli]
NCBI	MLS|ereB_1_A15097|MLS|Macrolide_esterases|EREB	gi|18542249|gb|AF466411.1|1-495
CARD	CARD|phgb|HQ833651|244-1120|ARO:3001965|CTX-M-105|betalactams|Class_A_betalactamases|CTX	@phgb|HQ833651|244-1120|ARO:3001965|CTX-M-105 [Escherichia coli]
NCBI	CARD|phgb|HQ833651|244-1120|ARO:3001965|CTX-M-105|betalactams|Class_A_betalactamases|CTX	gi|359359384|gb|JN232518.1|5358-6234 gi|323709074|gb|HQ833651.1|245-1121
NCBI	MLS|AF099140.1|gene1|MLS|Macrolide_esterases|EREA	gi|636631868|gb|KJ546444.1|710-1947 gi|636631799|gb|KJ543550.1|710-1947 gi|404515556|gb|JX297812.1|629-1866 gi|221047974|gb|FJ591050.1|689-1926 gi|156186306|gb|EU085376.1|671-1908 gi|56182558|gb|AY827837.1|705-1942 gi|66863972|dbj|AB188269.1|730-1967 gi|695198806|ref|NG_035084.1|126-1363 gi|659224503|gb|KJ668707.1|2796-4023 gi|659224503|gb|KJ668707.1|907-1105 gi|954629879|gb|CP013215.1|276726-275684 gi|954629879|gb|CP013215.1|280845-280647
CARD	CARD|phgb|AY080894|3-879|ARO:3001884|CTX-M-22|betalactams|Class_A_betalactamases|CTX	@phgb|AY080894|3-879|ARO:3001884|CTX-M-22 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AY080894|3-879|ARO:3001884|CTX-M-22|betalactams|Class_A_betalactamases|CTX	gi|300392842|gb|HM470254.1|1605-2481 gi|19526203|gb|AY080894.1|4-880 gi|695211428|ref|NG_036076.1|1-876
CARD	CARD|phgb|NC_003888|3968821-3969814|ARO:3002914|vanJ|Glycopeptides|Undecaprenol_pyrophosphate_recycling|VANJ	@phgb|NC_003888|3968821-3969814|ARO:3002914|vanJ [Streptomyces coelicolor A3(2)]
NCBI	CARD|phgb|NC_003888|3968821-3969814|ARO:3002914|vanJ|Glycopeptides|Undecaprenol_pyrophosphate_recycling|VANJ	gi|24427162|emb|AL939117.1|50872-51864 gi|485091803|gb|CP005080.1|2785540-2785571
CARD	CARD|phgb|AF190693|208-1069|ARO:3000944|TEM-78|betalactams|Class_A_betalactamases|TEM	@phgb|AF190693|208-1069|ARO:3000944|TEM-78 [Escherichia coli]
NCBI	CARD|phgb|AF190693|208-1069|ARO:3000944|TEM-78|betalactams|Class_A_betalactamases|TEM	gi|6176543|gb|AF190693.1|AF190693|209-1070
NCBI	Flq|AE016830.1|gene1598|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|29350190|gb|AE016830.1|1573667-1571205 gi|15982569|dbj|AB059406.1|2403-4865
ARG-ANNOT	Bla|TEM-186JN227084|309-1169|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-186:JN227084:309-1169:861
CARD	Bla|TEM-186JN227084|309-1169|861|betalactams|Class_A_betalactamases|TEM	@phgb|JN227084|308-1169|ARO:3001046|TEM-186 [Escherichia coli]
Lahey	Bla|TEM-186JN227084|309-1169|861|betalactams|Class_A_betalactamases|TEM	AET99222.1 JN227084.1:309-1169
NCBI	Bla|TEM-186JN227084|309-1169|861|betalactams|Class_A_betalactamases|TEM	gi|358009200|gb|JN227084.1|309-1169
Resfinder	Bla|TEM-186JN227084|309-1169|861|betalactams|Class_A_betalactamases|TEM	blaTEM-186_1_JN227084
NCBI	Flq|NC_002953.2863526|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|49243355|emb|BX571857.1|7005-9668 gi|47118312|dbj|BA000033.2|7005-9668
CARD	CARD|phgb|KM555152|0-657|ARO:3003193|QnrVC7|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	@phgb|KM555152|0-657|ARO:3003193|QnrVC7 [Vibrio cholerae]
NCBI	CARD|phgb|KM555152|0-657|ARO:3003193|QnrVC7|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	gi|734988473|gb|KM555152.1|1-657
Resfinder	CARD|phgb|KM555152|0-657|ARO:3003193|QnrVC7|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	QnrVC7_1_KM555152
NCBI	ACou|CR628337.1|gene758|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|53752796|emb|CR628337.1|818681-816801
ARG-ANNOT	AGly|Aac6-Ig|L09246|544-981|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Ig:L09246:544-981:438
CARD	AGly|Aac6-Ig|L09246|544-981|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|L09246|543-981|ARO:3002554|AAC(6')-Ig [Acinetobacter haemolyticus]
NCBI	AGly|Aac6-Ig|L09246|544-981|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|455436|gb|L09246.1|ACCAA6IG|544-981
Resfinder	AGly|Aac6-Ig|L09246|544-981|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Ig_1_L09246
ARG-ANNOT	gi|343480069|gb|JF274245.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-108:JF274245:1-864:864
CARD	gi|343480069|gb|JF274245.1|betalactams|Class_A_betalactamases|CTX	@phgb|JF274245|0-863|ARO:3001968|CTX-M-108 [Shigella sp. SH223]
NCBI	gi|343480069|gb|JF274245.1|betalactams|Class_A_betalactamases|CTX	gi|343480069|gb|JF274245.1|1-864
NCBI	283|AF121000.1|AF121000|MLS|23S_rRNA_methyltransferases|MYRA	gi|4583389|gb|AF121000.1|AF121000|10981-11832
NCBI	Rif|AE000516.2|gene708|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|984985728|gb|CP010338.1|763595-767131 gi|984981517|gb|CP010337.1|762285-765821 gi|984950177|gb|CP010330.1|759747-763283 gi|984945858|gb|CP010329.1|759722-763258 gi|749193065|gb|CP007027.1|759792-763328 gi|737516150|dbj|AP014573.1|763891-767427 gi|690310687|gb|CP009480.1|759195-762731 gi|559794742|gb|CP003248.2|759792-763328 gi|444893469|emb|AL123456.3|759789-763325 gi|378543272|emb|HE608151.1|761734-765270
NCBI	Bla|CP004022.1|gene834|betalactams|Mutant_porin_proteins|OMPD	gi|529186758|gb|CP004022.1|960405-959332
NCBI	1462|X71444.1|X71444|Metronidazole|nim_nitroimidazole_reductase|NIMA	gi|695196973|ref|NG_034588.1|1614-2144
Resfinder	1462|X71444.1|X71444|Metronidazole|nim_nitroimidazole_reductase|NIMA	nimA_1_X71444
CARD	CARD|pvgb|CP001485|257295-258480|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP001485|257295-258480|ARO:3001312|elfamycin resistant EF-Tu [Vibrio cholerae MJ-1236]
NCBI	CARD|pvgb|CP001485|257295-258480|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|939204655|gb|CP006947.1|2788365-2789550 gi|861210305|gb|CP007653.1|260347-259162 gi|785752771|gb|CP009042.1|381688-380503 gi|695931389|gb|CP007634.1|2807630-2806445 gi|378793418|gb|CP003330.1|382956-381771 gi|229368777|gb|CP001485.1|257296-258481 gi|227011820|gb|CP001235.1|432378-431193 gi|227008125|gb|CP001233.1|367671-366486 gi|146314918|gb|CP000627.1|2925030-2923845 gi|12057212|gb|AE003852.1|382944-381759
ARG-ANNOT	Bla|CTX-M-122|JN790863|233-1108|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-122:JN790863:233-1108:876
CARD	Bla|CTX-M-122|JN790863|233-1108|876|betalactams|Class_A_betalactamases|CTX	@phgb|JN790863|232-1108|ARO:3001981|CTX-M-122 [Escherichia coli]
Lahey	Bla|CTX-M-122|JN790863|233-1108|876|betalactams|Class_A_betalactamases|CTX	AFA51700.1 JN790863.1:233-1108
NCBI	Bla|CTX-M-122|JN790863|233-1108|876|betalactams|Class_A_betalactamases|CTX	gi|375313994|gb|JN790863.1|233-1108
ARG-ANNOT	gi|332867557|gb|EF685371.2|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-29:EF685371:1-1143:1143
CARD	gi|332867557|gb|EF685371.2|betalactams|Class_C_betalactamases|CMY	@phgb|EF685371|0-1143|ARO:3002040|CMY-29 [Escherichia coli]
Lahey	gi|332867557|gb|EF685371.2|betalactams|Class_C_betalactamases|CMY	ABS12248.1 EF685371.2:1-1143
NCBI	gi|332867557|gb|EF685371.2|betalactams|Class_C_betalactamases|CMY	gi|332867557|gb|EF685371.2|1-1143
Resfinder	gi|332867557|gb|EF685371.2|betalactams|Class_C_betalactamases|CMY	blaCMY-29_1_EF685371
CARD	gi|469665658|gb|KC603538.1|betalactams|Class_C_betalactamases|CMY	@phgb|KC603538|0-1131|ARO:3002111|CMY-98 [Citrobacter freundii]
NCBI	gi|469665658|gb|KC603538.1|betalactams|Class_C_betalactamases|CMY	gi|469665658|gb|KC603538.1|1-1131
Resfinder	gi|469665658|gb|KC603538.1|betalactams|Class_C_betalactamases|CMY	blaCMY-98_1_KC603538
ARG-ANNOT	627|X03364.1|X03364|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-IV:X03364:277-1065:789
CARD	627|X03364.1|X03364|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|X03364|0-789|ARO:3002648|APH(3')-IVa [Bacillus circulans]
NCBI	627|X03364.1|X03364|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|39413|emb|X03364.1|277-1065 gi|304142|gb|L20421.1|BACBUTBSLP|6526-6600
Resfinder	627|X03364.1|X03364|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-IV_1_X03364
NCBI	gi|25900616|emb|AJ437107.1|betalactams|Class_A_betalactamases|TEM	gi|25900616|emb|AJ437107.1|1-1091 gi|961666360|gb|KT185451.1|87734-87690 gi|530347473|gb|CP006657.1|114767-114811
CARD	386|AB016934.1|AB016934|Fosfomycin|Fosfomycin_phosphorylation|FOMB	@phgb|AB016934|7388-8381|ARO:3000449|FomB [Streptomyces wedmorensis]
NCBI	386|AB016934.1|AB016934|Fosfomycin|Fosfomycin_phosphorylation|FOMB	gi|3452578|dbj|AB016934.1|7389-8381
ARG-ANNOT	1220|DQ089809.1|DQ089809|betalactams|Class_A_betalactamases|BEL	(Bla)BEL-1:GU250439:763-1614:852
CARD	1220|DQ089809.1|DQ089809|betalactams|Class_A_betalactamases|BEL	@phgb|DQ089809|1005-1857|ARO:3002385|BEL-1 [Pseudomonas aeruginosa]
Lahey	1220|DQ089809.1|DQ089809|betalactams|Class_A_betalactamases|BEL	AAZ04368.1 DQ089809.1:1006-1857
NCBI	1220|DQ089809.1|DQ089809|betalactams|Class_A_betalactamases|BEL	gi|770533404|gb|KF745070.2|3077-3928 gi|283580179|gb|GU250441.1|1878-2729 gi|283580171|gb|GU250439.1|763-1614 gi|69957071|gb|DQ089809.1|1006-1857
Resfinder	1220|DQ089809.1|DQ089809|betalactams|Class_A_betalactamases|BEL	blaBEL-1_1_DQ089809
CARD	gi|684194166|gb|KJ997966.1|betalactams|Class_D_betalactamases|OXA	@phgb|KJ997966|0-831|ARO:3002496|OXA-418 [Acinetobacter bereziniae]
Lahey	gi|684194166|gb|KJ997966.1|betalactams|Class_D_betalactamases|OXA	AIN56719.1 KJ997966.1:1-831
NCBI	gi|684194166|gb|KJ997966.1|betalactams|Class_D_betalactamases|OXA	gi|684194166|gb|KJ997966.1|1-831
CARD	CARD|phgb|U00096|2484373-2487967|ARO:3000833|evgS|Multi-drug_resistance|MDR_regulator|EVGS	@phgb|U00096|2484373-2487967|ARO:3000833|evgS [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|2484373-2487967|ARO:3000833|evgS|Multi-drug_resistance|MDR_regulator|EVGS	gi|985000614|gb|CP014225.1|681574-685168 gi|958612453|gb|CP013048.1|1771969-1768375 gi|939732440|gb|CP011343.2|2466093-2469687 gi|939731527|gb|CP011342.2|2467018-2470612 gi|937526251|gb|CP012870.1|2157282-2153688 gi|937521852|gb|CP012869.1|2157282-2153688 gi|937517453|gb|CP012868.1|2157282-2153688 gi|923416119|gb|CP011113.1|2448011-2451605 gi|857137982|gb|CP011495.1|3725054-3728648 gi|850013407|gb|CP011938.1|2342766-2346360
ARG-ANNOT	Bla|TEM-127|AY368236|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-127:AY368236:1-861:861
CARD	Bla|TEM-127|AY368236|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY368236|0-861|ARO:3000989|TEM-127 [Escherichia coli]
Lahey	Bla|TEM-127|AY368236|1-861|861|betalactams|Class_A_betalactamases|TEM	AAR89358.1 AY368236.1:1-861
NCBI	Bla|TEM-127|AY368236|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|695210346|ref|NG_035932.1|1-861
Resfinder	Bla|TEM-127|AY368236|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-127_1_AY368236
NCBI	Mdr|CP000647.1|gene2517|Multi-drug_resistance|MDR_regulator|ASMA	gi|150953431|gb|CP000647.1|2753253-2751430
NCBI	Bla|CTX-M-89_1_FJ966096|betalactams|Class_A_betalactamases|CTX	gi|238801221|gb|FJ966096.1|1949-2824
Resfinder	Bla|CTX-M-89_1_FJ966096|betalactams|Class_A_betalactamases|CTX	blaCTX-M-89_1_FJ966096
CARD	AGly|AF313472.2|gene15|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	@phgb|AF313472|15593-16397|ARO:3002639|APH(3'')-Ib [Pseudomonas aeruginosa]
NCBI	AGly|AF313472.2|gene15|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|695212119|ref|NG_036333.1|15594-16397
CARD	gi|759001857|gb|KP071470.1|betalactams|Class_B_betalactamases|VIM	@phgb|KP071470|0-801|ARO:3003178|VIM-42 [Klebsiella pneumoniae]
Lahey	gi|759001857|gb|KP071470.1|betalactams|Class_B_betalactamases|VIM	AJP08641.1 KP071470.1:1-801
NCBI	gi|759001857|gb|KP071470.1|betalactams|Class_B_betalactamases|VIM	gi|759001857|gb|KP071470.1|1-801
ARG-ANNOT	1253|AF315351.1|AF315351|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-32:AF315351:673-1500:828
CARD	1253|AF315351.1|AF315351|betalactams|Class_D_betalactamases|OXA	@phgb|AF315351|672-1500|ARO:3001426|OXA-32 [Pseudomonas aeruginosa]
Lahey	1253|AF315351.1|AF315351|betalactams|Class_D_betalactamases|OXA	AAK58418.1 AF315351.1:673-1500
NCBI	1253|AF315351.1|AF315351|betalactams|Class_D_betalactamases|OXA	gi|14276839|gb|AF315351.1|AF315351|673-1500
Resfinder	1253|AF315351.1|AF315351|betalactams|Class_D_betalactamases|OXA	blaOXA-32_1_AF315351
ARG-ANNOT	AGly|AadA22|AM261837|74-865|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA22:AM261837:74-865:792
CARD	AGly|AadA22|AM261837|74-865|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AM261837|73-865|ARO:3002619|aadA22 [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	AGly|AadA22|AM261837|74-865|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|962148553|gb|KU130396.1|83837-84628 gi|943496798|gb|KR952338.1|889-98 gi|371927210|gb|JF412520.1|76-867 gi|347602550|gb|JF806492.1|886-95 gi|330885994|gb|HQ880276.1|80-871 gi|183396648|dbj|AB434537.1|107-898 gi|695212074|ref|NG_036322.1|74-865
Resfinder	AGly|AadA22|AM261837|74-865|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA22_1_AM261837
ARG-ANNOT	Bla|CTX-M-79|GU125702|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-79:GU125702:1-876:876
NCBI	Bla|CTX-M-79|GU125702|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|281335991|gb|GU125702.1|1-876
ARG-ANNOT	293|EU046614.1|EU046614|betalactams|Class_C_betalactamases|TRU	(Bla)TRU-1:EU046614:1-1149:1149
NCBI	293|EU046614.1|EU046614|betalactams|Class_C_betalactamases|TRU	gi|157933072|gb|EU046614.1|1-1149
Resfinder	293|EU046614.1|EU046614|betalactams|Class_C_betalactamases|TRU	blaTRU_1_EU046614
ARG-ANNOT	Bla|TEM-11|AY874537|178-1038|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-11:AY874537:178-1038:861
CARD	Bla|TEM-11|AY874537|178-1038|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY874537|177-1038|ARO:3000883|TEM-11 [Proteus mirabilis]
Lahey	Bla|TEM-11|AY874537|178-1038|861|betalactams|Class_A_betalactamases|TEM	AAW66604.1 AY874537.1:178-1038
NCBI	Bla|TEM-11|AY874537|178-1038|861|betalactams|Class_A_betalactamases|TEM	gi|808157946|gb|KP870110.1|3339-4199 gi|808157946|gb|KP870110.1|4250-4200 gi|58200708|gb|AY874537.1|178-1038
Resfinder	Bla|TEM-11|AY874537|178-1038|861|betalactams|Class_A_betalactamases|TEM	blaTEM-11_1_AY874537
ARG-ANNOT	Bla|OKP-A-7|AM051145|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-7:AM051145:1-861:861
CARD	Bla|OKP-A-7|AM051145|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051146|0-861|ARO:3002424|OKP-A-7 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-7|AM051145|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655071|emb|AM051145.1|1-861
Resfinder	Bla|OKP-A-7|AM051145|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-7_1_AM051145
NCBI	Bla|CTX-M-14_5_AJ416341|betalactams|Class_A_betalactamases|CTX	gi|16304814|emb|AJ416341.1|557-1432 gi|971520884|gb|CP008697.1|325072-324199 gi|971520884|gb|CP008697.1|497623-496750 gi|937637793|gb|KT868530.1|64770-63897 gi|873464024|gb|KR259130.1|1551-2424 gi|940516921|dbj|LC091534.1|1244-2117 gi|926473678|gb|CP012627.1|2210-1337 gi|918462945|gb|KP987215.1|32694-31821 gi|808208566|gb|CP009233.1|70343-71216 gi|675439089|dbj|AB915400.1|4574-5447 gi|675439084|dbj|AB915399.1|2909-3782
Resfinder	Bla|CTX-M-14_5_AJ416341|betalactams|Class_A_betalactamases|CTX	blaCTX-M-14_5_AJ416341
NCBI	685|unknown_id|unknown_name|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	gi|151026|gb|M98270.1|PSEANT4IIA|498-1
NCBI	Sul|sul1_10_DQ143913|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|72536051|gb|DQ143913.1|3703-4533
Resfinder	Sul|sul1_10_DQ143913|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_10_DQ143913
NCBI	Flq|NC_009725.1.5461733|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|556017688|gb|CP006845.1|7081-9462 gi|154350369|gb|CP000560.1|7081-9462
CARD	1673|HQ634775.2|HQ634775|Phenicol|Phenicol_efflux_pumps|CML	@phgb|AF458080|1504-2764|ARO:3002693|cmlA1 [Klebsiella pneumoniae]
NCBI	1673|HQ634775.2|HQ634775|Phenicol|Phenicol_efflux_pumps|CML	gi|765098769|dbj|LC031883.1|7531-8790 gi|364524682|gb|JN108884.1|928-2187 gi|335335057|gb|HQ634775.2|4068-5327 gi|330885969|gb|HQ880268.1|930-2189 gi|330885964|gb|HQ880266.1|936-2195 gi|330885950|gb|HQ880261.1|935-2194 gi|308826678|emb|FQ482074.1|78410-77151 gi|225217195|gb|FJ716798.1|902-2161 gi|27462652|gb|AF458080.1|1505-2764 gi|63147351|dbj|AB212941.1|962-2221
Resfinder	1673|HQ634775.2|HQ634775|Phenicol|Phenicol_efflux_pumps|CML	cmlA1_2_AB212941
CARD	Bla|IMP-1_1_DQ522237|betalactams|Class_B_betalactamases|IMP	@phgb|DQ522237|1075-1816|ARO:3002221|IMP-30 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-1_1_DQ522237|betalactams|Class_B_betalactamases|IMP	ABF70513.1 DQ522237.1:1076-1816
NCBI	Bla|IMP-1_1_DQ522237|betalactams|Class_B_betalactamases|IMP	gi|762041897|gb|KM589497.1|3019-3759 gi|102231664|gb|DQ522237.1|1076-1816
Resfinder	Bla|IMP-1_1_DQ522237|betalactams|Class_B_betalactamases|IMP	blaIMP-1_1_DQ522237
ARG-ANNOT	Bla|CTX-M-109|JF274248|1-865|865|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-109:JF274248:1-865:865
NCBI	Bla|CTX-M-109|JF274248|1-865|865|betalactams|Class_A_betalactamases|CTX	gi|343480075|gb|JF274248.1|865-1
CARD	CARD|phgb|AF252622|1740-2616|ARO:3001877|CTX-M-14|betalactams|Class_A_betalactamases|CTX	@phgb|AF252622|1740-2616|ARO:3001877|CTX-M-14 [Escherichia coli]
NCBI	CARD|phgb|AF252622|1740-2616|ARO:3001877|CTX-M-14|betalactams|Class_A_betalactamases|CTX	gi|971520884|gb|CP008697.1|325072-324196 gi|971520884|gb|CP008697.1|497623-496747 gi|937637793|gb|KT868530.1|64770-63894 gi|873464024|gb|KR259130.1|1551-2427 gi|940516921|dbj|LC091534.1|1244-2120 gi|926473678|gb|CP012627.1|2210-1334 gi|918462945|gb|KP987215.1|32694-31818 gi|808208566|gb|CP009233.1|70343-71219 gi|675439089|dbj|AB915400.1|4574-5450 gi|675439084|dbj|AB915399.1|2909-3785 gi|675439076|dbj|AB914799.1|5345-6221
CARD	CARD|phgb|AB765395|0-1143|ARO:3002993|AQU-1|betalactams|Class_C_betalactamases|AQU	@phgb|AB765395|0-1143|ARO:3002993|AQU-1 [Aeromonas dhakensis]
NCBI	CARD|phgb|AB765395|0-1143|ARO:3002993|AQU-1|betalactams|Class_C_betalactamases|AQU	gi|443906583|dbj|AB765395.1|1-1143
ARG-ANNOT	804|EU917444.1|EU917444|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRC	(Flq)QnrC:EU917444:1717-2382:666
CARD	804|EU917444.1|EU917444|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRC	@phgb|EU917444|1716-2382|ARO:3002787|QnrC [Proteus mirabilis]
NCBI	804|EU917444.1|EU917444|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRC	gi|309256296|gb|HM011095.1|1-666 gi|695213877|ref|NG_036697.1|1717-2382 gi|309256298|gb|HM011096.1|1-646 gi|309256290|gb|HM011092.1|31-636 gi|309256290|gb|HM011092.1|1-30 gi|309256294|gb|HM011094.1|229-606
Resfinder	804|EU917444.1|EU917444|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRC	QnrC_1_EU917444
ARG-ANNOT	gi|86450761|gb|DQ369751.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-149:DQ369751:1-861:861
CARD	gi|86450761|gb|DQ369751.1|betalactams|Class_A_betalactamases|TEM	@phgb|DQ369751|0-861|ARO:3001016|TEM-149 [Enterobacter aerogenes]
Lahey	gi|86450761|gb|DQ369751.1|betalactams|Class_A_betalactamases|TEM	ABC96711.1 DQ369751.1:1-861
NCBI	gi|86450761|gb|DQ369751.1|betalactams|Class_A_betalactamases|TEM	gi|86450761|gb|DQ369751.1|1-861
Resfinder	gi|86450761|gb|DQ369751.1|betalactams|Class_A_betalactamases|TEM	blaTEM-149_1_DQ369751
NCBI	Rif|CP000647.1|gene4402|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|150953431|gb|CP000647.1|4770044-4774105
NCBI	Flq|QnrB17_1_JN173051|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|341873880|gb|JN173051.1|37-681
Resfinder	Flq|QnrB17_1_JN173051|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB17_1_JN173051
CARD	CARD|phgb|EF219142|10-886|ARO:3001922|CTX-M-61|betalactams|Class_A_betalactamases|CTX	@phgb|EF219142|10-886|ARO:3001922|CTX-M-61 [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	CARD|phgb|EF219142|10-886|ARO:3001922|CTX-M-61|betalactams|Class_A_betalactamases|CTX	gi|124365351|gb|EF219142.1|11-887
ARG-ANNOT	Bla|OXA-195|HQ425493|1-822|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-195:HQ425493:1-822:822
CARD	Bla|OXA-195|HQ425493|1-822|822|betalactams|Class_D_betalactamases|OXA	@phgb|HQ425493|0-822|ARO:3001480|OXA-195 [Acinetobacter nosocomialis]
Lahey	Bla|OXA-195|HQ425493|1-822|822|betalactams|Class_D_betalactamases|OXA	AEB98921.1 HQ425493.1:1-822
NCBI	Bla|OXA-195|HQ425493|1-822|822|betalactams|Class_D_betalactamases|OXA	gi|329745038|gb|HQ425493.1|1-822
Resfinder	Bla|OXA-195|HQ425493|1-822|822|betalactams|Class_D_betalactamases|OXA	blaOXA-195_1_HQ425493
ARG-ANNOT	Bla|LEN-18|AM850908|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-18:AM850908:1-861:861
CARD	Bla|LEN-18|AM850908|1-861|861|betalactams|Class_A_betalactamases|LEN	@phgb|AM850908|0-861|ARO:3002465|LEN-18 [Klebsiella pneumoniae]
NCBI	Bla|LEN-18|AM850908|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|197724688|emb|AM850908.2|1-861
Resfinder	Bla|LEN-18|AM850908|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN18_1_AM850908
NCBI	Tet|tetM_4_X75073|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|404282|emb|X75073.1|228-2147
Resfinder	Tet|tetM_4_X75073|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_4_X75073
CARD	CARD|phgb|AJ746227|94-967|ARO:3002400|OXY-2-5|betalactams|Class_A_betalactamases|OXY	@phgb|AJ746227|94-967|ARO:3002400|OXY-2-5 [Klebsiella oxytoca]
NCBI	CARD|phgb|AJ746227|94-967|ARO:3002400|OXY-2-5|betalactams|Class_A_betalactamases|OXY	gi|48473856|emb|AJ746227.1|95-968 gi|34559245|gb|AY303807.1|225-1097
CARD	1004|KC199968.1|KC199968|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	@phgb|KC199968|0-453|ARO:3002853|arr-8 [Klebsiella oxytoca]
NCBI	1004|KC199968.1|KC199968|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|441088291|gb|KC199968.1|1-453
CARD	CARD|phgb|AM998375|1172-2084|ARO:3000853|AIM-1|betalactams|Class_B_betalactamases|AIM	@phgb|AM998375|1172-2084|ARO:3000853|AIM-1 [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AM998375|1172-2084|ARO:3000853|AIM-1|betalactams|Class_B_betalactamases|AIM	gi|198447192|emb|AM998375.1|1173-2085
CARD	AGly|AY139603.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AY139603|106-898|ARO:3002608|aadA8 [uncultured bacterium]
NCBI	AGly|AY139603.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|24209740|gb|AY139603.1|107-898 gi|695200467|ref|NG_036143.1|595-1386
ARG-ANNOT	Bla|TEM-26B|L19940|198-1006|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-26B:L19940:198-1006:861
CARD	Bla|TEM-26B|L19940|198-1006|861|betalactams|Class_A_betalactamases|TEM	@phgb|L19940|197-1006|ARO:3000896|TEM-26 [Klebsiella pneumoniae]
NCBI	Bla|TEM-26B|L19940|198-1006|861|betalactams|Class_A_betalactamases|TEM	gi|308844|gb|L19940.1|KPNTEMBL|198-1006
NCBI	Bla|OXA-SHE_1_AY066004|betalactams|Class_D_betalactamases|OXA	gi|21309655|gb|AY066004.1|174-1043
Resfinder	Bla|OXA-SHE_1_AY066004|betalactams|Class_D_betalactamases|OXA	blaOXA-SHE_1_AY066004
CARD	CARD|phgb|DQ212986|2029-2257|ARO:3000575|vanU|Glycopeptides|VanG-type_regulator|VANUG	@phgb|DQ212986|2029-2257|ARO:3000575|vanU [Enterococcus faecalis]
NCBI	CARD|phgb|DQ212986|2029-2257|ARO:3000575|vanU|Glycopeptides|VanG-type_regulator|VANUG	gi|762041216|gb|KF697366.1|34740-34968 gi|672937785|gb|KF686317.1|34740-34968 gi|674114364|gb|CP007573.1|760594-760822 gi|674107077|gb|CP007570.1|638850-639078 gi|77380191|gb|DQ212986.1|2030-2258 gi|33355827|gb|AY271782.1|17095-17323
ARG-ANNOT	1288|DQ361087.2|DQ361087|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-22:FM876313:116-856:741
CARD	1288|DQ361087.2|DQ361087|betalactams|Class_B_betalactamases|IMP	@phgb|DQ361087|356-1097|ARO:3002213|IMP-22 [Pseudomonas fluorescens]
Lahey	1288|DQ361087.2|DQ361087|betalactams|Class_B_betalactamases|IMP	ABC88434.1 DQ361087.2:357-1097
NCBI	1288|DQ361087.2|DQ361087|betalactams|Class_B_betalactamases|IMP	gi|408816339|dbj|AB754495.1|1-741 gi|229611331|emb|FM876313.1|116-856 gi|126574581|gb|DQ361087.2|357-1097
Resfinder	1288|DQ361087.2|DQ361087|betalactams|Class_B_betalactamases|IMP	blaIMP-22_2_DQ361087
ARG-ANNOT	Bla|OXA-164|GU831575|1-843|843|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-164:GU831575:1-843:843
CARD	Bla|OXA-164|GU831575|1-843|843|betalactams|Class_D_betalactamases|OXA	@phgb|GU831575|0-843|ARO:3001662|OXA-164 [Acinetobacter baumannii]
Lahey	Bla|OXA-164|GU831575|1-843|843|betalactams|Class_D_betalactamases|OXA	ADK34116.1 GU831575.1:1-843
NCBI	Bla|OXA-164|GU831575|1-843|843|betalactams|Class_D_betalactamases|OXA	gi|300791411|gb|GU831575.1|1-843
Resfinder	Bla|OXA-164|GU831575|1-843|843|betalactams|Class_D_betalactamases|OXA	blaOXA-164_1_GU831575
CARD	CARD|phgb|AY264780|1824-3006|ARO:3000569|tet41|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET41	@phgb|AY264780|1824-3006|ARO:3000569|tet41 [Serratia marcescens]
NCBI	CARD|phgb|AY264780|1824-3006|ARO:3000569|tet41|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET41	gi|117380087|gb|AY264780.2|1825-3007
ARG-ANNOT	gi|160858185|emb|AJ866284.2|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-61:AJ866284:1-861:861
CARD	gi|160858185|emb|AJ866284.2|betalactams|Class_A_betalactamases|SHV	@phgb|AJ866284|0-861|ARO:3001116|SHV-61 [Klebsiella pneumoniae]
Lahey	gi|160858185|emb|AJ866284.2|betalactams|Class_A_betalactamases|SHV	CAI30650.2 AJ866284.2:1-861
NCBI	gi|160858185|emb|AJ866284.2|betalactams|Class_A_betalactamases|SHV	gi|160858185|emb|AJ866284.2|1-861
Resfinder	gi|160858185|emb|AJ866284.2|betalactams|Class_A_betalactamases|SHV	blaSHV-61_1_AJ866284
ARG-ANNOT	Bla|B-6|AF189302|1-747|747|betalactams|Class_B_betalactamases|BLAB	(Bla)B-6:AF189302:1-747:747
NCBI	Bla|B-6|AF189302|1-747|747|betalactams|Class_B_betalactamases|BLAB	gi|9587063|gb|AF189302.1|AF189302|1-747
Resfinder	Bla|B-6|AF189302|1-747|747|betalactams|Class_B_betalactamases|BLAB	blaB-6_1_AF189302
ARG-ANNOT	Bla|TEM-57|FJ405211|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-57:FJ405211:1-861:861
CARD	Bla|TEM-57|FJ405211|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|FJ405211|0-861|ARO:3000926|TEM-57 [Escherichia coli]
Lahey	Bla|TEM-57|FJ405211|1-861|861|betalactams|Class_A_betalactamases|TEM	ACJ43254.1 FJ405211.1:1-861
NCBI	Bla|TEM-57|FJ405211|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|695213774|ref|NG_036676.1|1-861
Resfinder	Bla|TEM-57|FJ405211|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-57_1_FJ405211
ARG-ANNOT	Phe|CatB9|AF462019|27-656|630|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	(Phe)CatB9:AF462019:27-656:630
CARD	Phe|CatB9|AF462019|27-656|630|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	@phgb|AF462019|26-656|ARO:3002681|catB9 [Vibrio cholerae]
NCBI	Phe|CatB9|AF462019|27-656|630|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|939207326|gb|CP006948.1|313910-314539 gi|861213011|gb|CP007654.1|313074-313703 gi|785751853|gb|CP009041.1|313965-314594 gi|695934019|gb|CP007635.1|40302-40931 gi|566037305|gb|KF680548.1|4186-4815 gi|462293218|gb|AJFN02000091.1|623-1252 gi|378796054|gb|CP003331.1|315278-315907 gi|356648368|gb|CP003070.1|40380-41009 gi|229371548|gb|CP001486.1|1046411-1045782 gi|12057213|gb|AE003853.1|315311-315940
Resfinder	Phe|CatB9|AF462019|27-656|630|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	catB9_1_AF462019
NCBI	Gly|VanXY-C_3_EU151752|Glycopeptides|VanC-type_resistance_protein|VANXYC	gi|161779845|gb|EU151752.1|1078-1650
Resfinder	Gly|VanXY-C_3_EU151752|Glycopeptides|VanC-type_resistance_protein|VANXYC	VanXY-C_3_EU151752
NCBI	Sul|sul2_1_AF542061|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|24021288|gb|AF542061.1|2088-2903
Resfinder	Sul|sul2_1_AF542061|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_1_AF542061
ARG-ANNOT	Bla|OXA-199|HQ637466|1233-2057|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-199:HQ637466:1233-2057:825
NCBI	Bla|OXA-199|HQ637466|1233-2057|825|betalactams|Class_D_betalactamases|OXA	gi|337263167|gb|HQ637466.1|1233-2057
Resfinder	Bla|OXA-199|HQ637466|1233-2057|825|betalactams|Class_D_betalactamases|OXA	blaOXA-199_1_HQ637466
ARG-ANNOT	921|U72714.1|MTU72714|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	(AGly)Aac2-Ic:U72714:373-918:546
NCBI	921|U72714.1|MTU72714|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	gi|984994143|gb|CP010340.1|315300-314755 gi|984989958|gb|CP010339.1|314981-314436 gi|984985728|gb|CP010338.1|315051-314506 gi|984981517|gb|CP010337.1|315046-314501 gi|984976917|gb|CP010336.1|313107-312562 gi|984972452|gb|CP010335.1|314464-313919 gi|984967653|gb|CP010334.1|309881-309336 gi|984963331|gb|CP010333.1|313572-313027 gi|984954355|gb|CP010331.1|313086-312541 gi|984950177|gb|CP010330.1|314852-314307
Resfinder	921|U72714.1|MTU72714|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	aac(2')-Ic_1_U72714
ARG-ANNOT	Bla|CTX-M-99|HM803271|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-99:HM803271:1-876:876
CARD	Bla|CTX-M-99|HM803271|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|HM803271|0-876|ARO:3001958|CTX-M-99 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-99|HM803271|1-876|876|betalactams|Class_A_betalactamases|CTX	ADL27532.1 HM803271.1:1-876
NCBI	Bla|CTX-M-99|HM803271|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|302340958|gb|HM803271.1|1-876
Resfinder	Bla|CTX-M-99|HM803271|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-99_1_HM803271
ARG-ANNOT	Bla|CTX-M-27|AY156923|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-27:AY156923:1-876:876
CARD	Bla|CTX-M-27|AY156923|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY156923|0-876|ARO:3001889|CTX-M-27 [Escherichia coli]
Lahey	Bla|CTX-M-27|AY156923|1-876|876|betalactams|Class_A_betalactamases|CTX	AAO61597.1 AY156923.1:1-876
NCBI	Bla|CTX-M-27|AY156923|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|940516925|dbj|LC091535.1|494-1369 gi|745799340|gb|CP007652.1|43694-44569 gi|675402505|dbj|AB985522.1|505-1380 gi|675402501|dbj|AB985521.1|350-1225 gi|675402497|dbj|AB985520.1|350-1225 gi|668347687|dbj|AB976592.1|505-1380 gi|668347683|dbj|AB976591.1|337-1212 gi|668347679|dbj|AB976590.1|350-1225 gi|399228967|gb|JX232216.1|222-1097 gi|221149288|gb|EU418919.1|612-1487
Resfinder	Bla|CTX-M-27|AY156923|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-27_1_EU916273
CARD	CARD|pvgb|CP003248|4243410-4246695|ARO:3003453|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBA|RequiresSNPConfirmation	@pvgb|CP003248|4243410-4246695|ARO:3003453|Mycobacterium tuberculosis embA mutant conferring resistance to ethambutol [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|CP003248|4243410-4246695|ARO:3003453|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBA|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|4256905-4260190 gi|984989958|gb|CP010339.1|4231141-4234426 gi|984981517|gb|CP010337.1|4233480-4236765 gi|984950177|gb|CP010330.1|4253608-4256893 gi|984945858|gb|CP010329.1|4260337-4263622 gi|749193065|gb|CP007027.1|4242613-4245898 gi|737516150|dbj|AP014573.1|4246830-4250115 gi|690310687|gb|CP009480.1|4235642-4238927 gi|559794742|gb|CP003248.2|4243411-4246696 gi|542043551|gb|CP001664.1|4240072-4243357
NCBI	gi|57232517|gb|AY853593.1|betalactams|Class_A_betalactamases|TEM	gi|695211221|ref|NG_036036.1|1-1080 gi|479327147|gb|KC354802.1|11753-11985
CARD	CARD|phgb|AF188199|214-1075|ARO:3000936|TEM-70|betalactams|Class_A_betalactamases|TEM	@phgb|AF188199|214-1075|ARO:3000936|TEM-70 [Escherichia coli]
NCBI	CARD|phgb|AF188199|214-1075|ARO:3000936|TEM-70|betalactams|Class_A_betalactamases|TEM	gi|6007798|gb|AF188199.1|AF188199|215-1076
ARG-ANNOT	Bla|SHV-31|GU064396|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-31:GU064396:1-861:861
NCBI	Bla|SHV-31|GU064396|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|262477946|gb|GU064396.1|1-861
Resfinder	Bla|SHV-31|GU064396|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-31_1_GU064396
ARG-ANNOT	Bla|TEM-123|AY327539|1-858|858|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-123:AY327539:1-858:858
CARD	Bla|TEM-123|AY327539|1-858|858|betalactams|Class_A_betalactamases|TEM	@phgb|AY327539|0-858|ARO:3000985|TEM-123 [Proteus mirabilis]
Lahey	Bla|TEM-123|AY327539|1-858|858|betalactams|Class_A_betalactamases|TEM	AAQ93490.1 AY327539.1:1-858
NCBI	Bla|TEM-123|AY327539|1-858|858|betalactams|Class_A_betalactamases|TEM	gi|37575114|gb|AY327539.1|1-858
Resfinder	Bla|TEM-123|AY327539|1-858|858|betalactams|Class_A_betalactamases|TEM	blaTEM-123_1_AY327539
NCBI	ACou|NC_003197.1.1254704|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|981191958|emb|LN999997.1|2058108-2060000 gi|973795115|gb|AE006468.2|3345861-3343969 gi|821161554|gb|CP011428.1|3374087-3372195 gi|808186398|gb|CP007523.1|4030092-4028200 gi|777181114|emb|LN829402.1|671606-673498 gi|764057510|gb|CP007235.1|4117540-4115648 gi|764048557|gb|CP007216.1|3969752-3967860 gi|674281104|gb|CP009102.1|3281756-3279864 gi|669110799|gb|CP007804.2|3257397-3255505 gi|661245796|dbj|AP014565.1|3477822-3475930
NCBI	Flq|NC_002163.1.905319|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|756103065|gb|CP010301.1|1001585-998994 gi|756089737|gb|CP010072.1|1039335-1036744 gi|589078008|gb|CP006689.1|960218-957627 gi|589076343|gb|CP006688.1|960219-957628 gi|589074677|gb|CP006687.1|960219-957628 gi|589073010|gb|CP006686.1|960217-957626 gi|589071344|gb|CP006685.1|960218-957627 gi|401780468|emb|HE978252.1|960222-957631 gi|284925303|gb|CP001876.1|963089-960498 gi|30407139|emb|AL111168.1|960222-957631
CARD	Elf|CP001918.1|gene242|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP001918|235165-236350|ARO:3001312|elfamycin resistant EF-Tu [Enterobacter cloacae subsp. cloacae ATCC 13047]
NCBI	Elf|CP001918.1|gene242|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|295054830|gb|CP001918.1|235166-236350
CARD	CARD|phgb|Y17714|146-1016|ARO:3002399|OXY-2-4|betalactams|Class_A_betalactamases|OXY	@phgb|Y17714|146-1016|ARO:3002399|OXY-2-4 [Klebsiella oxytoca]
NCBI	CARD|phgb|Y17714|146-1016|ARO:3002399|OXY-2-4|betalactams|Class_A_betalactamases|OXY	gi|4775462|emb|Y17714.1|147-1017
ARG-ANNOT	Phe|CatA2|X53796|187-903|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)CatA2:X53796:187-903:648
CARD	Phe|CatA2|X53796|187-903|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|X53796|186-828|ARO:3002684|catII [Escherichia coli]
NCBI	Phe|CatA2|X53796|187-903|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|539360073|gb|KC989925.1|3696-3055 gi|41780|emb|X53796.1|187-828
Resfinder	Phe|CatA2|X53796|187-903|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	catA2_1_X53796
ARG-ANNOT	gi|121485908|gb|EF136375.1|betalactams|Class_A_betalactamases|VEB	(Bla)VEB-4:EF136375:1-900:900
CARD	gi|121485908|gb|EF136375.1|betalactams|Class_A_betalactamases|VEB	@phgb|EF136375|0-900|ARO:3002373|VEB-4 [Proteus mirabilis]
Lahey	gi|121485908|gb|EF136375.1|betalactams|Class_A_betalactamases|VEB	ABM54868.1 EF136375.1:1-900
NCBI	gi|121485908|gb|EF136375.1|betalactams|Class_A_betalactamases|VEB	gi|121485908|gb|EF136375.1|1-900
Resfinder	gi|121485908|gb|EF136375.1|betalactams|Class_A_betalactamases|VEB	blaVEB-4_1_EF136375
CARD	Bla|KF986258.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF986258|14-839|ARO:3001563|OXA-377 [Acinetobacter baumannii]
Lahey	Bla|KF986258.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30277.1 KF986258.1:15-839
NCBI	Bla|KF986258.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389151|gb|KF986258.1|15-839
ARG-ANNOT	Bla|TEM-189|JN254627|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-189:JN254627:1-861:861
CARD	Bla|TEM-189|JN254627|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|JN254627|0-861|ARO:3001049|TEM-189 [Escherichia coli]
Lahey	Bla|TEM-189|JN254627|1-861|861|betalactams|Class_A_betalactamases|TEM	AEL79515.1 JN254627.1:1-861
NCBI	Bla|TEM-189|JN254627|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|342919999|gb|JN254627.1|1-861
Resfinder	Bla|TEM-189|JN254627|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-189_1_JN254627
CARD	CARD|pvgb|AL009126|290131-290698|ARO:3003028|lmrA|MLS|Lincomycin-resistant_lmrA|LMRA|RequiresSNPConfirmation	@pvgb|AL009126|290131-290698|ARO:3003028|lmrA [Bacillus subtilis subsp. subtilis str. 168]
NCBI	CARD|pvgb|AL009126|290131-290698|ARO:3003028|lmrA|MLS|Lincomycin-resistant_lmrA|LMRA|RequiresSNPConfirmation	gi|983204966|gb|CP014166.1|290129-290696 gi|807072327|gb|CP011115.1|290130-290697 gi|749183975|gb|CP010314.1|290132-290699 gi|728887195|gb|CP010053.1|290142-290709 gi|728882887|gb|CP010052.1|290139-290706 gi|724425628|emb|LN680001.1|290118-290685 gi|723796434|emb|LN649259.1|290118-290685 gi|649013680|gb|CP008698.1|290140-290707 gi|649009321|gb|CP007800.1|290140-290707 gi|558566549|gb|CP006881.1|290137-290704
CARD	Mdr|NC_010410.6002907|Multi-drug_resistance|MDR_regulator|ADER	@phgb|HM440348|0-744|ARO:3000553|adeR [Acinetobacter baumannii]
NCBI	Mdr|NC_010410.6002907|Multi-drug_resistance|MDR_regulator|ADER	gi|939559781|gb|CP012952.1|1975466-1974723 gi|787858845|gb|CP008706.1|1975596-1974853 gi|751410783|gb|CP010781.1|2025171-2025914 gi|306485916|gb|HM440348.1|1-744 gi|213054530|gb|CP001182.1|2163698-2164441 gi|169147133|emb|CU459141.1|1885188-1884445 gi|88758851|emb|CT025814.2|1-744
ARG-ANNOT	Flq|QnrB9|EF653270|1-648|648|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB9:EF653270:1-645:645;(Flq)QnrB9:EF653270:1-648:648
CARD	Flq|QnrB9|EF653270|1-648|648|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EF653270|0-648|ARO:3002725|QnrB11 [Citrobacter freundii]
NCBI	Flq|QnrB9|EF653270|1-648|648|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|152149796|gb|EF653270.1|1-648
Resfinder	Flq|QnrB9|EF653270|1-648|648|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB9_1_EF653270
ARG-ANNOT	gi|408535168|dbj|AB753457.1|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-40:AB753457:1-741:741
CARD	gi|408535168|dbj|AB753457.1|betalactams|Class_B_betalactamases|IMP	@phgb|AB753457|0-741|ARO:3002231|IMP-40 [Pseudomonas aeruginosa]
Lahey	gi|408535168|dbj|AB753457.1|betalactams|Class_B_betalactamases|IMP	BAM62794.1 AB753457.1:1-741
NCBI	gi|408535168|dbj|AB753457.1|betalactams|Class_B_betalactamases|IMP	gi|408535168|dbj|AB753457.1|1-741
Resfinder	gi|408535168|dbj|AB753457.1|betalactams|Class_B_betalactamases|IMP	blaIMP-40_1_AB753457
CARD	CARD|phgb|JX017364|238-1114|ARO:3001988|CTX-M-129|betalactams|Class_A_betalactamases|CTX	@phgb|JX017364|238-1114|ARO:3001988|CTX-M-129 [Escherichia coli]
NCBI	CARD|phgb|JX017364|238-1114|ARO:3001988|CTX-M-129|betalactams|Class_A_betalactamases|CTX	gi|387165736|gb|JX017364.1|239-1115
NCBI	187|KF823969.1|KF823969|Glycopeptides|VanB-type_accessory_protein|VANWB	gi|577698901|gb|KF823969.1|3335-4150
ARG-ANNOT	gi|82592678|gb|DQ279850.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-147:DQ279850:1-861:861
CARD	gi|82592678|gb|DQ279850.1|betalactams|Class_A_betalactamases|TEM	@phgb|DQ279850|0-861|ARO:3001014|TEM-147 [Pseudomonas aeruginosa]
Lahey	gi|82592678|gb|DQ279850.1|betalactams|Class_A_betalactamases|TEM	ABB84515.1 DQ279850.1:1-861
NCBI	gi|82592678|gb|DQ279850.1|betalactams|Class_A_betalactamases|TEM	gi|82592678|gb|DQ279850.1|1-861
Resfinder	gi|82592678|gb|DQ279850.1|betalactams|Class_A_betalactamases|TEM	blaTEM-147_1_DQ279850
ARG-ANNOT	gi|12005681|gb|AF250872.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-87:AF250872:1-861:861
CARD	gi|12005681|gb|AF250872.1|betalactams|Class_A_betalactamases|TEM	@phgb|AF250872|0-861|ARO:3000954|TEM-87 [Proteus mirabilis]
Lahey	gi|12005681|gb|AF250872.1|betalactams|Class_A_betalactamases|TEM	AAG44570.1 AF250872.1:1-861
NCBI	gi|12005681|gb|AF250872.1|betalactams|Class_A_betalactamases|TEM	gi|695200079|ref|NG_035373.1|1-861
Resfinder	gi|12005681|gb|AF250872.1|betalactams|Class_A_betalactamases|TEM	blaTEM-87_1_AF250872
ARG-ANNOT	gi|13491138|gb|AF290912.1|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-5:AF290912:1-741:741
CARD	gi|13491138|gb|AF290912.1|betalactams|Class_B_betalactamases|IMP	@phgb|AF290912|0-741|ARO:3002196|IMP-5 [Acinetobacter baumannii]
Lahey	gi|13491138|gb|AF290912.1|betalactams|Class_B_betalactamases|IMP	AAK27847.1 AF290912.1:1-741
NCBI	gi|13491138|gb|AF290912.1|betalactams|Class_B_betalactamases|IMP	gi|342161745|gb|JF810083.1|2171-2911 gi|13491138|gb|AF290912.1|1-741
Resfinder	gi|13491138|gb|AF290912.1|betalactams|Class_B_betalactamases|IMP	blaIMP-5_1_JF810083
ARG-ANNOT	Bla|LEN-1|X04515|286-1125|840|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-1:X04515:286-1125:840
CARD	Bla|LEN-1|X04515|286-1125|840|betalactams|Class_A_betalactamases|LEN	@phgb|X04515|285-1125|ARO:3002454|LEN-1 [Klebsiella pneumoniae]
NCBI	Bla|LEN-1|X04515|286-1125|840|betalactams|Class_A_betalactamases|LEN	gi|43812|emb|X04515.1|286-1125
Resfinder	Bla|LEN-1|X04515|286-1125|840|betalactams|Class_A_betalactamases|LEN	blaLEN1_1_X04515
NCBI	ACou|NC_002758.1121329|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|156720466|dbj|AP009324.1|1432057-1434054 gi|47208328|dbj|BA000017.4|1430657-1432654
CARD	Bla|OXA-330_1_KF203104|betalactams|Class_D_betalactamases|OXA	@phgb|KF203104|0-822|ARO:3001518|OXA-330 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-330_1_KF203104|betalactams|Class_D_betalactamases|OXA	AGW16412.1 KF203104.1:1-822
NCBI	Bla|OXA-330_1_KF203104|betalactams|Class_D_betalactamases|OXA	gi|544207407|gb|KF203104.1|1-822
Resfinder	Bla|OXA-330_1_KF203104|betalactams|Class_D_betalactamases|OXA	blaOXA-330_1_KF203104
NCBI	AGly|aadA2_2_JQ363967|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|984348768|gb|KT425375.1|1012-1803 gi|975900838|gb|CP014005.1|53050-53841 gi|971497742|gb|CP012903.1|35736-36527 gi|971497538|gb|CP012902.1|59147-58356 gi|970338578|gb|KT725789.1|87007-86216 gi|970338460|gb|KT725788.1|92267-91476 gi|963885563|gb|KT355691.1|1056-1847 gi|963329770|gb|KT316808.1|970-1761 gi|958108507|emb|LN824138.1|5339-6130 gi|948288870|gb|KR259318.1|1054-1845
Resfinder	AGly|aadA2_2_JQ363967|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA2_2_JQ364967
NCBI	gi|388891770|gb|JQ772478.1|betalactams|Class_A_betalactamases|GES	gi|388891770|gb|JQ772478.1|1-1503 gi|695212024|ref|NG_036316.1|5026-5308
CARD	CARD|pvgb|AL009126|916777-919348|ARO:3003324|Bacillus|Lipopeptides|Phosphotidylglycerol_lysyltransferase|MPRF|RequiresSNPConfirmation	@phgb|AL009126|916777-919348|ARO:3000863|mprF [Bacillus subtilis subsp. subtilis str. 168];@pvgb|AL009126|916777-919348|ARO:3003324|Bacillus subtilis mprF mutations conferring resistance to daptomycin [Bacillus subtilis subsp. subtilis str. 168]
NCBI	CARD|pvgb|AL009126|916777-919348|ARO:3003324|Bacillus|Lipopeptides|Phosphotidylglycerol_lysyltransferase|MPRF|RequiresSNPConfirmation	gi|983204966|gb|CP014166.1|896011-898581 gi|846133629|gb|CP011882.1|1827236-1829806 gi|807072327|gb|CP011115.1|916776-919346 gi|749183975|gb|CP010314.1|896267-898837 gi|728887195|gb|CP010053.1|916539-919109 gi|728882887|gb|CP010052.1|916787-919357 gi|724425628|emb|LN680001.1|916756-919326 gi|723796434|emb|LN649259.1|916754-919324 gi|670919138|gb|CP005997.1|858160-860730 gi|649013680|gb|CP008698.1|900326-902896
CARD	CARD|phgb|EU259884|6411-7311|ARO:3002374|VEB-6|betalactams|Class_A_betalactamases|VEB	@phgb|EU259884|6411-7311|ARO:3002374|VEB-6 [Proteus mirabilis]
NCBI	CARD|phgb|EU259884|6411-7311|ARO:3002374|VEB-6|betalactams|Class_A_betalactamases|VEB	gi|746616518|gb|KF856624.1|32795-33695 gi|549442275|gb|KF501390.1|8301-9201 gi|332000475|gb|HQ888851.1|33148-34048 gi|219814656|gb|EU259884.2|6412-7312
ARG-ANNOT	Bla|CMY-17|AY513266|165-1310|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-17:AY513266:165-1310:1146
CARD	Bla|CMY-17|AY513266|165-1310|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AY513266|164-1310|ARO:3002028|CMY-17 [Escherichia coli]
Lahey	Bla|CMY-17|AY513266|165-1310|1146|betalactams|Class_C_betalactamases|CMY	AAS13399.1 AY513266.1:165-1310
NCBI	Bla|CMY-17|AY513266|165-1310|1146|betalactams|Class_C_betalactamases|CMY	gi|42357702|gb|AY513266.1|165-1310
Resfinder	Bla|CMY-17|AY513266|165-1310|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-17_1_AY513266
ARG-ANNOT	Bla|GOB-4|AF189293|1-756|756|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-4:AF189293:1-756:756
NCBI	Bla|GOB-4|AF189293|1-756|756|betalactams|Class_B_betalactamases|GOB	gi|9587045|gb|AF189293.1|AF189293|1-756
Resfinder	Bla|GOB-4|AF189293|1-756|756|betalactams|Class_B_betalactamases|GOB	blaGOB-4_1_AF189293
NCBI	gi|46370392|gb|AY589493.1|betalactams|Class_A_betalactamases|TEM	gi|46370392|gb|AY589493.1|1-1027 gi|943457735|gb|KT818627.1|75073-74889 gi|943457735|gb|KT818627.1|136664-136480 gi|959195734|gb|CP013326.1|60956-60772 gi|959190351|gb|CP013324.1|110410-110226 gi|910286593|gb|CP012163.1|68998-69182 gi|902611595|gb|CP011978.1|70771-70955 gi|828971542|gb|CP011645.1|70809-70993 gi|828965729|gb|CP011639.1|9250-9066 gi|828952302|gb|CP011622.1|124502-124686 gi|828952208|gb|CP011621.1|60956-60772
CARD	CARD|phgb|HF953351|2461-3358|ARO:3002255|CARB-16|betalactams|Class_A_betalactamases|CARB	@phgb|HF953351|2461-3358|ARO:3002255|CARB-16 [Psychrobacter maritimus]
NCBI	CARD|phgb|HF953351|2461-3358|ARO:3002255|CARB-16|betalactams|Class_A_betalactamases|CARB	gi|483933409|emb|HF953351.1|2462-3359
CARD	CARD|phgb|NC_010410|3621491-3622283|ARO:3002601|aadA|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|NC_010410|3621491-3622283|ARO:3002601|aadA [Acinetobacter baumannii AYE]
NCBI	CARD|phgb|NC_010410|3621491-3622283|ARO:3002601|aadA|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|982894792|gb|KT368820.1|1645-853 gi|974022331|gb|CP013924.1|2757910-2758702 gi|971533857|gb|KT362048.1|2151-1359 gi|970697631|gb|KT935446.1|94461-95253 gi|949881887|gb|CP012931.1|172581-171789 gi|944398239|gb|CP013025.1|2324228-2323436 gi|939537618|gb|KR610434.1|2391-1599 gi|806639039|gb|KM972598.1|3483-2691 gi|806639024|gb|KM972596.1|3487-2695 gi|806639015|gb|KM972595.1|4022-3230
NCBI	Bla|SHV-28_1_HM751101|betalactams|Class_A_betalactamases|SHV	gi|975895720|gb|CP014004.1|1087615-1088475 gi|960865004|gb|CP012043.1|2753389-2752529 gi|695172424|gb|CP008929.1|4247745-4246885 gi|23194361|gb|AF538324.1|1-861 gi|83272142|gb|DQ298520.1|22-882
Resfinder	Bla|SHV-28_1_HM751101|betalactams|Class_A_betalactamases|SHV	blaSHV-28_1_HM751101
CARD	Bla|CTX-M-6_1_AJ005044|betalactams|Class_A_betalactamases|CTX	@phgb|AJ005044|0-876|ARO:3001869|CTX-M-6 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	Bla|CTX-M-6_1_AJ005044|betalactams|Class_A_betalactamases|CTX	CAA06311.1 AJ005044.1:1-876
NCBI	Bla|CTX-M-6_1_AJ005044|betalactams|Class_A_betalactamases|CTX	gi|695198362|ref|NG_034962.1|1-876
Resfinder	Bla|CTX-M-6_1_AJ005044|betalactams|Class_A_betalactamases|CTX	blaCTX-M-6_1_AJ005044
CARD	gi|472232605|emb|FR848831.1|betalactams|Class_A_betalactamases|TEM	@phgb|FR848831|0-861|ARO:3001375|TEM-184 [Escherichia coli]
Lahey	gi|472232605|emb|FR848831.1|betalactams|Class_A_betalactamases|TEM	CCA61905.1 FR848831.1:1-861
NCBI	gi|472232605|emb|FR848831.1|betalactams|Class_A_betalactamases|TEM	gi|472232605|emb|FR848831.1|1-861
Resfinder	gi|472232605|emb|FR848831.1|betalactams|Class_A_betalactamases|TEM	blaTEM-184_1_FR848831
NCBI	gi|375313994|gb|JN790863.1|betalactams|Class_A_betalactamases|CTX	gi|375313994|gb|JN790863.1|233-1108
NCBI	gi|2739291|emb|Y10282.1|betalactams|Class_C_betalactamases|FOX	gi|695198169|ref|NG_034922.1|1-1193
CARD	gi|326467060|gb|HQ641421.1|betalactams|Class_A_betalactamases|KPC	@phgb|HQ641421|0-882|ARO:3002322|KPC-12 [Klebsiella pneumoniae]
Lahey	gi|326467060|gb|HQ641421.1|betalactams|Class_A_betalactamases|KPC	ADZ75467.1 HQ641421.1:1-882
NCBI	gi|326467060|gb|HQ641421.1|betalactams|Class_A_betalactamases|KPC	gi|308922607|gb|HQ258934.1|1-882
CARD	gi|698174185|gb|KM087847.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087847|0-1140|ARO:3002152|DHA-21 [Morganella morganii]
Lahey	gi|698174185|gb|KM087847.1|betalactams|Class_C_betalactamases|DHA	AIT76100.1 KM087847.1:1-1140
NCBI	gi|698174185|gb|KM087847.1|betalactams|Class_C_betalactamases|DHA	gi|698174185|gb|KM087847.1|1-1140
Lahey	Bla|KF986261.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30280.1 KF986261.1:869-45
NCBI	Bla|KF986261.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389157|gb|KF986261.1|869-45
ARG-ANNOT	Bla|SHV-165|JX121131|1-858|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-165:JX121131:1-858:858
CARD	Bla|SHV-165|JX121131|1-858|858|betalactams|Class_A_betalactamases|SHV	@phgb|JX121131|0-858|ARO:3001203|SHV-165 [Klebsiella pneumoniae]
Lahey	Bla|SHV-165|JX121131|1-858|858|betalactams|Class_A_betalactamases|SHV	AFQ23970.1 JX121131.1:1-858
NCBI	Bla|SHV-165|JX121131|1-858|858|betalactams|Class_A_betalactamases|SHV	gi|401871186|gb|JX121131.1|1-858
Resfinder	Bla|SHV-165|JX121131|1-858|858|betalactams|Class_A_betalactamases|SHV	blaSHV-165_1_JX121131
CARD	CARD|phgb|AP009048|4338624-4340268|ARO:3003576|PmrC|Cationic_antimicrobial_peptides|Lipid_A_modification|PMRC	@phgb|AP009048|4338624-4340268|ARO:3003576|PmrC [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|AP009048|4338624-4340268|ARO:3003576|PmrC|Cationic_antimicrobial_peptides|Lipid_A_modification|PMRC	gi|985000614|gb|CP014225.1|2531036-2532680 gi|958627747|gb|CP013253.1|3669962-3668318 gi|939732440|gb|CP011343.2|4313951-4315595 gi|939731527|gb|CP011342.2|4314637-4316281 gi|937526251|gb|CP012870.1|307706-306062 gi|937521852|gb|CP012869.1|307706-306062 gi|937517453|gb|CP012868.1|307706-306062 gi|932857508|emb|LN877770.1|134666-136310 gi|923416119|gb|CP011113.1|4292012-4293656 gi|899729770|gb|CP012127.1|4308243-4309887
ARG-ANNOT	Bla|OXY1-1|Z30177|349-1224|876|betalactams|Class_A_betalactamases|OXY	(Bla)OXY1-1:Z30177:349-1224:876
CARD	Bla|OXY1-1|Z30177|349-1224|876|betalactams|Class_A_betalactamases|OXY	@phgb|Z30177|348-1224|ARO:3002389|OXY-1-1 [Klebsiella oxytoca]
NCBI	Bla|OXY1-1|Z30177|349-1224|876|betalactams|Class_A_betalactamases|OXY	gi|612156087|gb|CP004887.1|5087989-5088864 gi|365906294|gb|CP003218.1|2871460-2870585 gi|456262|emb|Z30178.1|349-1224 gi|456260|emb|Z30177.1|349-1224
Resfinder	Bla|OXY1-1|Z30177|349-1224|876|betalactams|Class_A_betalactamases|OXY	blaOXY-1-1_1_Z30177
CARD	CARD|phgb|Z21956|191-1079|ARO:3003665|NmcR|betalactams|Betalactamase_regulator|NMCR	@phgb|Z21956|191-1079|ARO:3003665|NmcR [Enterobacter cloacae]
NCBI	CARD|phgb|Z21956|191-1079|ARO:3003665|NmcR|betalactams|Betalactamase_regulator|NMCR	gi|901708644|gb|KR919803.1|31663-30776 gi|848613023|gb|KR057496.1|7068-7955 gi|848612979|gb|KR057495.1|7068-7955 gi|848612886|gb|KR057493.1|7068-7955 gi|848612839|gb|KR057492.1|7068-7955 gi|33112004|emb|AJ536087.2|1-888 gi|396086|emb|Z21956.1|192-1079
CARD	246|DQ679966.1|DQ679966|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXE	@phgb|DQ679966|299-1493|ARO:3000207|acrA [Enterobacter cloacae]
NCBI	246|DQ679966.1|DQ679966|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXE	gi|110611189|gb|DQ679966.1|300-1493
ARG-ANNOT	AGly|Aac3-IIa|X51534|91-951|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-IIa:X51534:91-951:861
NCBI	AGly|Aac3-IIa|X51534|91-951|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|815975449|gb|CP011314.1|292465-293325 gi|762209844|emb|LK391770.1|20750-21610 gi|752502612|dbj|AP014611.1|46841-45981 gi|692328596|gb|CP009534.1|3621589-3622449 gi|675327552|gb|CP009257.1|2462986-2462126 gi|674651793|emb|LM994717.1|19796-20656 gi|633894420|emb|HG918041.1|123222-122362 gi|284433120|gb|GU256641.1|75948-75088 gi|695213434|ref|NG_036607.1|23216-24076 gi|695196850|ref|NG_034542.1|143-1003
Resfinder	AGly|Aac3-IIa|X51534|91-951|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	aac(3)-IIa_1_X51534
ARG-ANNOT	Bla|SME-3|AY584237|124-1008|885|betalactams|Class_A_betalactamases|SME	(Bla)SME-3:AY584237:124-1008:885
CARD	Bla|SME-3|AY584237|124-1008|885|betalactams|Class_A_betalactamases|SME	@phgb|AY584237|123-1008|ARO:3002381|SME-3 [Serratia marcescens]
Lahey	Bla|SME-3|AY584237|124-1008|885|betalactams|Class_A_betalactamases|SME	AAS92558.1 AY584237.1:124-1008
NCBI	Bla|SME-3|AY584237|124-1008|885|betalactams|Class_A_betalactamases|SME	gi|46403068|gb|AY584237.1|124-1008 gi|510203|emb|Z30237.1|95-1
Resfinder	Bla|SME-3|AY584237|124-1008|885|betalactams|Class_A_betalactamases|SME	blaSME-3_1_AY584237
CARD	CARD|phgb|AY033516|2835-3711|ARO:3001880|CTX-M-17|betalactams|Class_A_betalactamases|CTX	@phgb|AY033516|2835-3711|ARO:3001880|CTX-M-17 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AY033516|2835-3711|ARO:3001880|CTX-M-17|betalactams|Class_A_betalactamases|CTX	gi|16506517|gb|AY033516.1|2836-3712
CARD	CARD|phgb|FJ790516|1287-2085|ARO:3001804|OXA-145|betalactams|Class_D_betalactamases|OXA	@phgb|FJ790516|1287-2085|ARO:3001804|OXA-145 [Pseudomonas aeruginosa]
NCBI	CARD|phgb|FJ790516|1287-2085|ARO:3001804|OXA-145|betalactams|Class_D_betalactamases|OXA	gi|225219825|gb|FJ790516.1|1288-2086
NCBI	gi|591389153|gb|KF986259.1|betalactams|Class_D_betalactamases|OXA	gi|591389153|gb|KF986259.1|1-879
ARG-ANNOT	AGly|AadA9|AJ420072|26773-27609|837|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA9:AJ420072:26773-27609:837
NCBI	AGly|AadA9|AJ420072|26773-27609|837|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|148717265|dbj|AB285088.1|89-925 gi|110588866|gb|DQ778995.1|107-943 gi|110588864|gb|DQ778994.1|107-943 gi|89513168|gb|DQ390458.1|3932-3096 gi|17059596|emb|AJ420072.1|26773-27609
Resfinder	AGly|AadA9|AJ420072|26773-27609|837|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA9_1_AJ420072
ARG-ANNOT	AGly|Aac6-IIc|AF162771|62-643|582|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-IIc:AF162771:62-643:582
CARD	AGly|Aac6-IIc|AF162771|62-643|582|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF162771|61-643|ARO:3002596|AAC(6')-IIc [Pseudomonas aeruginosa]
NCBI	AGly|Aac6-IIc|AF162771|62-643|582|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|954629879|gb|CP013215.1|281621-281040 gi|948288909|gb|KR259328.1|145-726 gi|908266278|gb|CP012170.1|140087-140668 gi|828933802|gb|CP011601.1|168912-169493 gi|826570395|gb|KR262557.1|1628-2209 gi|758852100|gb|CP010893.1|30303-29722 gi|682122704|gb|KJ668596.1|1072-1653 gi|659224503|gb|KJ668707.1|131-712 gi|300245053|gb|HM173356.1|2099-2680 gi|269927217|gb|GU067641.1|1-582
Resfinder	AGly|Aac6-IIc|AF162771|62-643|582|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-IIc_1_AF162771
CARD	CARD|phgb|NC_007907|4201992-4202691|ARO:3003728|VanRI|Glycopeptides|VanI-type_regulator|VANRI	@phgb|NC_007907|4201992-4202691|ARO:3003728|VanRI [Desulfitobacterium hafniense]
NCBI	CARD|phgb|NC_007907|4201992-4202691|ARO:3003728|VanRI|Glycopeptides|VanI-type_regulator|VANRI	gi|698315210|emb|LK996017.1|4143103-4143801 gi|89332194|dbj|AP008230.1|4201993-4202691
ARG-ANNOT	Bla|TEM-15|AM849805|263-1123|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-15:AM849805:263-1123:861
CARD	Bla|TEM-15|AM849805|263-1123|861|betalactams|Class_A_betalactamases|TEM	@phgb|AM849805|262-1123|ARO:3000886|TEM-15 [Haemophilus parainfluenzae]
Lahey	Bla|TEM-15|AM849805|263-1123|861|betalactams|Class_A_betalactamases|TEM	CAO98721.1 AM849805.1:263-1123
NCBI	Bla|TEM-15|AM849805|263-1123|861|betalactams|Class_A_betalactamases|TEM	gi|695212971|ref|NG_036530.1|263-1123
Resfinder	Bla|TEM-15|AM849805|263-1123|861|betalactams|Class_A_betalactamases|TEM	blaTEM-15_1_AM849805
CARD	CARD|phgb|AP009048|2810082-2811255|ARO:3000027|emrA|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRA	@phgb|AP009048|2810082-2811255|ARO:3000027|emrA [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|AP009048|2810082-2811255|ARO:3000027|emrA|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRA	gi|985000614|gb|CP014225.1|1008627-1009800 gi|958627747|gb|CP013253.1|611072-609899 gi|939732440|gb|CP011343.2|2786304-2787477 gi|939731527|gb|CP011342.2|2787296-2788469 gi|937526251|gb|CP012870.1|1830229-1829056 gi|937521852|gb|CP012869.1|1830229-1829056 gi|937517453|gb|CP012868.1|1830229-1829056 gi|932857508|emb|LN877770.1|3635140-3636313 gi|923416119|gb|CP011113.1|2768274-2769447 gi|899729770|gb|CP012127.1|2785874-2787047
ARG-ANNOT	gi|61661221|gb|AY949202.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-77:AY949202:1-825:825
CARD	gi|61661221|gb|AY949202.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY949202|0-825|ARO:3001622|OXA-77 [Acinetobacter baumannii]
Lahey	gi|61661221|gb|AY949202.1|betalactams|Class_D_betalactamases|OXA	AAX51233.1 AY949202.1:1-825
NCBI	gi|61661221|gb|AY949202.1|betalactams|Class_D_betalactamases|OXA	gi|61661221|gb|AY949202.1|1-825
Resfinder	gi|61661221|gb|AY949202.1|betalactams|Class_D_betalactamases|OXA	blaOXA-77_1_AY949202
NCBI	Sul|sul2_18_AJ830714|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|118197419|gb|EF090911.1|141-956 gi|66840802|emb|AJ830714.1|146-961
Resfinder	Sul|sul2_18_AJ830714|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_18_AJ830714
CARD	gi|694179057|gb|KM211508.1|betalactams|Class_A_betalactamases|CTX	@phgb|KM211508|0-876|ARO:3003163|CTX-M-155 [Klebsiella pneumoniae]
Lahey	gi|694179057|gb|KM211508.1|betalactams|Class_A_betalactamases|CTX	AIS67611.1 KM211508.1:1-876
NCBI	gi|694179057|gb|KM211508.1|betalactams|Class_A_betalactamases|CTX	gi|694179057|gb|KM211508.1|1-876
CARD	MLS|ermD_3_M77505|MLS|23S_rRNA_methyltransferases|ERMD	@phgb|M77505|771-1635|ARO:3000495|ErmD [Bacillus licheniformis]
NCBI	MLS|ermD_3_M77505|MLS|23S_rRNA_methyltransferases|ERMD	gi|891267061|gb|CP012110.1|2772183-2773046 gi|143194|gb|M77505.1|BACMLSB|772-1635
Resfinder	MLS|ermD_3_M77505|MLS|23S_rRNA_methyltransferases|ERMD	erm(D)_3_M77505
ARG-ANNOT	Bla|GOB-5|AF189290|1-756|756|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-5:AF189290:1-756:756
NCBI	Bla|GOB-5|AF189290|1-756|756|betalactams|Class_B_betalactamases|GOB	gi|9587039|gb|AF189290.1|AF189290|1-756
Resfinder	Bla|GOB-5|AF189290|1-756|756|betalactams|Class_B_betalactamases|GOB	blaGOB-5_1_AF189290
NCBI	ACou|NC_007622.3794232|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|82655308|emb|AJ938182.1|1319966-1321963
NCBI	Tet|tetG_3_S52437|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	gi|695196871|ref|NG_034552.1|495-1676
Resfinder	Tet|tetG_3_S52437|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	tet(G)_3_S52437
ARG-ANNOT	Gly|VanXYc3|AY033764|1075-1647|573|Glycopeptides|VanC-type_resistance_protein|VANXYC	(Gly)VanXYc3:AY033764:1075-1647:573
NCBI	Gly|VanXYc3|AY033764|1075-1647|573|Glycopeptides|VanC-type_resistance_protein|VANXYC	gi|161779872|gb|EU151759.1|1078-1650 gi|18476137|gb|AY033764.1|1075-1647
CARD	Bla|OXA-357_1_KF421160|betalactams|Class_D_betalactamases|OXA	@phgb|KF421160|0-822|ARO:3001544|OXA-357 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-357_1_KF421160|betalactams|Class_D_betalactamases|OXA	AGZ83153.1 KF421160.1:1-822
NCBI	Bla|OXA-357_1_KF421160|betalactams|Class_D_betalactamases|OXA	gi|556904153|gb|KF421160.1|1-822
Resfinder	Bla|OXA-357_1_KF421160|betalactams|Class_D_betalactamases|OXA	blaOXA-357_1_KF421160
CARD	gi|558605688|gb|KF526113.1|betalactams|Class_C_betalactamases|CMY	@phgb|KF526113|0-1146|ARO:3002112|CMY-100 [Citrobacter freundii]
Lahey	gi|558605688|gb|KF526113.1|betalactams|Class_C_betalactamases|CMY	AHA80101.1 KF526113.1:1-1146
NCBI	gi|558605688|gb|KF526113.1|betalactams|Class_C_betalactamases|CMY	gi|558605688|gb|KF526113.1|1-1146
ARG-ANNOT	Bla|OXA-93|DQ519087|39-863|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-93:DQ519087:39-863:825
CARD	Bla|OXA-93|DQ519087|39-863|825|betalactams|Class_D_betalactamases|OXA	@phgb|DQ519087|38-863|ARO:3001628|OXA-93 [Acinetobacter baumannii]
Lahey	Bla|OXA-93|DQ519087|39-863|825|betalactams|Class_D_betalactamases|OXA	ABF47916.1 DQ519087.1:39-863
NCBI	Bla|OXA-93|DQ519087|39-863|825|betalactams|Class_D_betalactamases|OXA	gi|94960148|gb|DQ519087.1|39-863
Resfinder	Bla|OXA-93|DQ519087|39-863|825|betalactams|Class_D_betalactamases|OXA	blaOXA-93_1_DQ519087
ARG-ANNOT	315|AF155139.2|AF155139|Glycopeptides|VanF-type_regulator|VANSF	(Gly)VanS-F:AF155139:2200-3297:1098
CARD	315|AF155139.2|AF155139|Glycopeptides|VanF-type_regulator|VANSF	@phgb|AF155139|2199-3297|ARO:3002936|vanSF [Paenibacillus popilliae ATCC 14706]
NCBI	315|AF155139.2|AF155139|Glycopeptides|VanF-type_regulator|VANSF	gi|40363824|gb|AF155139.2|2200-3297
Resfinder	315|AF155139.2|AF155139|Glycopeptides|VanF-type_regulator|VANSF	VanS-F_1_AF155139
CARD	17|AJ252200.1|AJ252200|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	@phgb|AJ252200|4493-5894|ARO:3003057|smeF [Stenotrophomonas maltophilia]
NCBI	17|AJ252200.1|AJ252200|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	gi|384076029|emb|HE798556.1|4094508-4093108 gi|11071582|emb|AJ252200.1|4494-5894
ARG-ANNOT	Bla|TEM-89|AY039040|189-1022|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-89:AY039040:189-1022:861
CARD	Bla|TEM-89|AY039040|189-1022|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY039040|188-1022|ARO:3000956|TEM-89 [Proteus mirabilis]
NCBI	Bla|TEM-89|AY039040|189-1022|861|betalactams|Class_A_betalactamases|TEM	gi|14700043|gb|AY039040.1|189-1022
ARG-ANNOT	AGly|Aac3-IIe|EU022315|1-861|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-IIe:EU022315:1-861:861
NCBI	AGly|Aac3-IIe|EU022315|1-861|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|154184311|gb|EU022315.1|1-861
Resfinder	AGly|Aac3-IIe|EU022315|1-861|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	aac(3)-IIe_1_EU022315
NCBI	Bla|A_1_DQ424965|betalactams|Class_A_betalactamases|BLAA	gi|90018739|gb|DQ424965.1|1-855
Resfinder	Bla|A_1_DQ424965|betalactams|Class_A_betalactamases|BLAA	blaA_1_DQ424965
ARG-ANNOT	Bla|VEB-2|AY027870|47-946|900|betalactams|Class_A_betalactamases|VEB	(Bla)VEB-2:AY027870:47-946:900
CARD	Bla|VEB-2|AY027870|47-946|900|betalactams|Class_A_betalactamases|VEB	@phgb|AY027870|46-946|ARO:3002371|VEB-2 [Pseudomonas aeruginosa]
Lahey	Bla|VEB-2|AY027870|47-946|900|betalactams|Class_A_betalactamases|VEB	AAK29174.1 AY027870.1:47-946
NCBI	Bla|VEB-2|AY027870|47-946|900|betalactams|Class_A_betalactamases|VEB	gi|17999556|gb|AY027870.1|47-946
Resfinder	Bla|VEB-2|AY027870|47-946|900|betalactams|Class_A_betalactamases|VEB	blaVEB-2_1_AY027870
CARD	CARD|pvgb|NC_011374|104283-106236|ARO:3003305|Ureaplasma|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	@pvgb|NC_011374|104283-106236|ARO:3003305|Ureaplasma urealyticum  gyrB conferring resistance to fluoroquinolone [Ureaplasma urealyticum]
NCBI	CARD|pvgb|NC_011374|104283-106236|ARO:3003305|Ureaplasma|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	gi|209541489|gb|CP001184.1|104284-106236 gi|161598228|gb|EU279401.1|1-271
NCBI	AGly|aph3-prime-Ia_1_V00359|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|974708445|gb|KT203761.1|4614-3799 gi|961454902|gb|KT991388.1|7213-8028 gi|937637492|gb|KT334335.1|88391-87576 gi|944397480|gb|CP013024.1|53217-54032 gi|939564300|gb|CP012956.1|42356-41541 gi|927351340|gb|KT207463.1|2413-1598 gi|922980777|gb|KP897158.1|1473-2288 gi|916354859|gb|KT339320.1|3886-4701 gi|916354855|gb|KT339319.1|4680-5495 gi|916354852|gb|KT339318.1|3814-4629
Resfinder	AGly|aph3-prime-Ia_1_V00359|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-Ia_1_V00359
CARD	Flq|QnrB67_1_KC580656|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC580656|0-645|ARO:3002779|QnrB67 [Citrobacter braakii]
NCBI	Flq|QnrB67_1_KC580656|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|496297323|gb|KC580656.1|1-645
Resfinder	Flq|QnrB67_1_KC580656|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB67_1_KC580656
ARG-ANNOT	Bla|CTX-M-112|JF274246|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-112:JF274246:1-876:876
CARD	Bla|CTX-M-112|JF274246|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|JF274246|0-876|ARO:3001972|CTX-M-112 [Shigella sp. SH257]
Lahey	Bla|CTX-M-112|JF274246|1-876|876|betalactams|Class_A_betalactamases|CTX	AEM44652.1 JF274246.1:1-876
NCBI	Bla|CTX-M-112|JF274246|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|343480071|gb|JF274246.1|1-876
Resfinder	Bla|CTX-M-112|JF274246|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-112_1_JF274246
CARD	CARD|phgb|X15791|1375-2257|ARO:3003563|NPS|betalactams|Class_A_betalactamases|NPS	@phgb|X15791|1375-2257|ARO:3003563|NPS beta-lactamase [Rhodobacter capsulatus]
NCBI	CARD|phgb|X15791|1375-2257|ARO:3003563|NPS|betalactams|Class_A_betalactamases|NPS	gi|45987|emb|X15791.1|1376-2257
NCBI	gi|591389167|gb|KJ135344.1|betalactams|Class_D_betalactamases|OXA	gi|591389167|gb|KJ135344.1|1-874
CARD	MLS|ermC_9_Y09001|MLS|23S_rRNA_methyltransferases|ERMC	@phgb|Y09001|164-899|ARO:3000250|ErmC [Staphylococcus hominis]
NCBI	MLS|ermC_9_Y09001|MLS|23S_rRNA_methyltransferases|ERMC	gi|695198038|ref|NG_034886.1|165-899
Resfinder	MLS|ermC_9_Y09001|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_9_Y09001
NCBI	610|Y18050.2|Y18050|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|930190865|emb|LN555650.1|261056-260559 gi|930189590|emb|HG530658.1|196764-196267 gi|873463574|gb|KR106190.1|15766-15269 gi|730042884|gb|KJ571202.1|4611-5108 gi|825088700|gb|KP975077.1|106374-105877 gi|821392896|gb|KP873171.1|21030-20533 gi|768032361|gb|KM975294.1|1561-2058 gi|742797756|emb|LK054503.1|13297-13794 gi|636632016|gb|KJ579055.1|207-704 gi|635661965|gb|KJ547703.1|1055-1552
CARD	Flq|QnrS6_1_HQ631376|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	@phgb|HQ631376|0-657|ARO:3002795|QnrS6 [Aeromonas hydrophila]
NCBI	Flq|QnrS6_1_HQ631376|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|365268524|gb|JN315885.1|3247-3903 gi|695225189|ref|NG_041234.1|1-657
Resfinder	Flq|QnrS6_1_HQ631376|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	QnrS6_1_HQ631376
NCBI	AGly|spc_2_U50980|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT9	gi|814617358|gb|KM009065.1|5135-4383 gi|469521017|gb|KC747117.1|291-1043 gi|410110450|gb|JX964749.1|8154-7402 gi|385137449|gb|JQ776640.1|4223-4975 gi|319919358|gb|HQ122651.1|2232-2984 gi|262478123|gb|GU126429.1|1367-2119 gi|237871515|gb|FJ946915.1|2743-3495 gi|219718108|gb|FJ410919.1|3268-4020 gi|219718104|gb|FJ410918.1|3511-4263 gi|219718101|gb|FJ410917.1|1840-2592
NCBI	Rif|NC_011035.1.6448762|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|870665722|gb|CP012028.1|1033933-1038111 gi|193932879|gb|CP001050.1|2015365-2019543
CARD	CARD|phgb|NC_007907.1|2195400-2196522|ARO:3003724|vanWI|Glycopeptides|VanI-type_accessory_protein|VANWI	@phgb|NC_007907.1|2195400-2196522|ARO:3003724|vanWI [Desulfitobacterium hafniense]
NCBI	CARD|phgb|NC_007907.1|2195400-2196522|ARO:3003724|vanWI|Glycopeptides|VanI-type_accessory_protein|VANWI	gi|698315210|emb|LK996017.1|2191942-2193063 gi|219536331|gb|CP001336.1|3279604-3280725 gi|89332194|dbj|AP008230.1|2195401-2196522
ARG-ANNOT	Bla|FONA-6|AJ251244|1054-1941|888|betalactams|Class_A_betalactamases|FONA	(Bla)FONA-6:AJ251244:1054-1941:888
NCBI	Bla|FONA-6|AJ251244|1054-1941|888|betalactams|Class_A_betalactamases|FONA	gi|6468750|emb|AJ251244.1|1054-1941 gi|557668500|gb|KF484082.1|1-477
Resfinder	Bla|FONA-6|AJ251244|1054-1941|888|betalactams|Class_A_betalactamases|FONA	blaFONA-6_1_AJ251244
CARD	CARD|phgb|U35369|3182-4010|ARO:3002964|vanWB|Glycopeptides|VanB-type_accessory_protein|VANWB	@phgb|U35369|3182-4010|ARO:3002964|vanWB [Enterococcus faecalis]
NCBI	CARD|phgb|U35369|3182-4010|ARO:3002964|vanWB|Glycopeptides|VanB-type_accessory_protein|VANWB	gi|29350190|gb|AE016830.1|2215783-2214956 gi|1209525|gb|U35369.1|EFU35369|3183-4010
ARG-ANNOT	Gly|VanB|AY655711|1-1029|1029|Glycopeptides|VanB-type_resistance_protein|VANB	(Gly)VanB:AY655711:1-1029:1029
NCBI	Gly|VanB|AY655711|1-1029|1029|Glycopeptides|VanB-type_resistance_protein|VANB	gi|378937014|gb|CP003351.1|2840405-2839377 gi|80973263|gb|AY655721.2|4857-5885 gi|80973252|gb|AY655720.2|4857-5885 gi|56123445|gb|AY655711.1|1-1029
ARG-ANNOT	Bla|ACT-1|U58495|28-1173|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-1:U58495:28-1173:1146
CARD	Bla|ACT-1|U58495|28-1173|1146|betalactams|Class_C_betalactamases|ACT	@phgb|U58495|27-1173|ARO:3001821|ACT-1 [Klebsiella pneumoniae]
Lahey	Bla|ACT-1|U58495|28-1173|1146|betalactams|Class_C_betalactamases|ACT	AAC45086.2 U58495.2:28-1173
NCBI	Bla|ACT-1|U58495|28-1173|1146|betalactams|Class_C_betalactamases|ACT	gi|323541267|gb|HQ235646.1|656-1801 gi|323541257|gb|HQ235645.1|1084-2229 gi|4827074|gb|U58495.2|KPU58495|28-1173
Resfinder	Bla|ACT-1|U58495|28-1173|1146|betalactams|Class_C_betalactamases|ACT	blaACT-1_1_U58495
NCBI	gi|347984504|gb|JF826285.1|Kpneumoniae|CDC1000529|NewDelhi|ndm-1|1|betalactams|Class_B_betalactamases|NDM	gi|974752094|gb|KT164809.1|1368-2091 gi|974752068|gb|KT164808.1|8391-9114 gi|974570295|emb|LN997846.1|3255921-3255198 gi|971825756|dbj|LC107774.1|58-781 gi|971497891|gb|CP012901.1|4095962-4096685 gi|971497742|gb|CP012903.1|22231-22954 gi|971497538|gb|CP012902.1|62438-63161 gi|969535508|gb|KT364224.1|58-781 gi|969535508|gb|KT364224.1|3296-4019 gi|963776569|gb|KU162940.1|58-781 gi|963776554|gb|KT365396.1|58-781
ARG-ANNOT	Bla|GOB-14|AY647252|1-879|879|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-14:AY647252:1-879:879
NCBI	Bla|GOB-14|AY647252|1-879|879|betalactams|Class_B_betalactamases|GOB	gi|49798170|gb|AY647252.1|1-879
Resfinder	Bla|GOB-14|AY647252|1-879|879|betalactams|Class_B_betalactamases|GOB	blaGOB-14_1_AY647252
NCBI	1203|AF318077.1|AF318077|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|295984001|gb|HM021184.1|2023-2487 gi|19919175|gb|AF347074.1|2576-3040 gi|13094933|gb|AF318077.1|2035-2499
ARG-ANNOT	Bla|TEM-151|DQ834729|206-1066|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-151:DQ834729:206-1066:861
CARD	Bla|TEM-151|DQ834729|206-1066|861|betalactams|Class_A_betalactamases|TEM	@phgb|DQ834729|205-1066|ARO:3001018|TEM-151 [Escherichia coli]
Lahey	Bla|TEM-151|DQ834729|206-1066|861|betalactams|Class_A_betalactamases|TEM	ABI74448.1 DQ834729.1:206-1066
NCBI	Bla|TEM-151|DQ834729|206-1066|861|betalactams|Class_A_betalactamases|TEM	gi|114386383|gb|DQ834729.1|206-1066 gi|808157946|gb|KP870110.1|4250-4200
Resfinder	Bla|TEM-151|DQ834729|206-1066|861|betalactams|Class_A_betalactamases|TEM	blaTEM-151_1_DQ834729
CARD	Bla|SHV-45_1_AF547625|betalactams|Class_A_betalactamases|SHV	@phgb|AF547625|0-861|ARO:3001103|SHV-45 [Klebsiella pneumoniae]
Lahey	Bla|SHV-45_1_AF547625|betalactams|Class_A_betalactamases|SHV	AAN39364.1 AF547625.1:1-861
NCBI	Bla|SHV-45_1_AF547625|betalactams|Class_A_betalactamases|SHV	gi|23664425|gb|AF547625.1|1-861
Resfinder	Bla|SHV-45_1_AF547625|betalactams|Class_A_betalactamases|SHV	blaSHV-45_1_AF547625
CARD	Phe|AB082569.2|gene1|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|AB082569|122-764|ARO:3002670|cat [Photobacterium damselae subsp. piscicida]
NCBI	Phe|AB082569.2|gene1|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|857118485|gb|CP011223.1|1702069-1702710 gi|251752703|dbj|AB453229.1|47046-47687 gi|695213434|ref|NG_036607.1|29514-30155 gi|695212995|ref|NG_036533.1|5291-5932 gi|119416936|dbj|AB262966.1|1817-2458 gi|51507259|emb|AJ627386.1|18211-17570 gi|42662212|dbj|AB082569.2|123-764 gi|506209727|emb|HF937164.1|1-518 gi|506210043|emb|HF937163.1|1-509 gi|506210041|emb|HF937162.1|1-494
ARG-ANNOT	Bla|FOX-3|Y11068|17-1165|1149|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-3:Y11068:17-1165:1149
CARD	Bla|FOX-3|Y11068|17-1165|1149|betalactams|Class_C_betalactamases|FOX	@phgb|Y11068|16-1165|ARO:3002157|FOX-3 [Klebsiella oxytoca]
Lahey	Bla|FOX-3|Y11068|17-1165|1149|betalactams|Class_C_betalactamases|FOX	CAA71947.1 Y11068.1:17-1165
NCBI	Bla|FOX-3|Y11068|17-1165|1149|betalactams|Class_C_betalactamases|FOX	gi|927028715|dbj|LC072710.1|606-1754 gi|1841437|emb|Y11068.1|17-1165
Resfinder	Bla|FOX-3|Y11068|17-1165|1149|betalactams|Class_C_betalactamases|FOX	blaFOX-3_1_Y11068
ARG-ANNOT	Tet|OtrB|AF079900|40-1733|1692|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|OTRB	(Tet)OtrB:AF079900:40-1733:1692
NCBI	Tet|OtrB|AF079900|40-1733|1692|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|OTRB	gi|3108176|gb|AF061335.1|AF061335|3-1611
NCBI	AGly|aph3-prime-IIc_1_AM743169|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|190010013|emb|AM743169.1|2377498-2378310
Resfinder	AGly|aph3-prime-IIc_1_AM743169|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-IIc_1_AM743169
CARD	gi|698174165|gb|KM087837.1|betalactams|Class_C_betalactamases|CMY	@phgb|KM087837|0-1146|ARO:3002123|CMY-112 [Citrobacter freundii]
Lahey	gi|698174165|gb|KM087837.1|betalactams|Class_C_betalactamases|CMY	AIT76090.1 KM087837.1:1-1146
NCBI	gi|698174165|gb|KM087837.1|betalactams|Class_C_betalactamases|CMY	gi|698174165|gb|KM087837.1|1-1146
NCBI	Bla|CMY-39_1_HM565135|betalactams|Class_C_betalactamases|CMY	gi|301088270|gb|HM565135.1|1-1146
Resfinder	Bla|CMY-39_1_HM565135|betalactams|Class_C_betalactamases|CMY	blaCMY-39_1_HM565135
ARG-ANNOT	Tmt|DfrA27|EU675686|2543-3016|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA27:EU675686:2543-3016:474
NCBI	Tmt|DfrA27|EU675686|2543-3016|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|948288874|gb|KR259319.1|1532-2005 gi|948288855|gb|KR259314.1|1532-2005 gi|942528113|gb|KR699629.1|1533-2006 gi|942528090|gb|KR699626.1|1532-2005 gi|929998186|gb|KR080529.1|1532-2005 gi|887516996|gb|KR338351.1|4147-4620 gi|887516988|gb|KR338349.1|2614-3087 gi|808157961|gb|KP870112.1|3967-4440 gi|808157952|gb|KP870111.1|3921-4394 gi|760459642|gb|KP688397.1|123720-124193
NCBI	Bla|SHV-5_9_AY502000|betalactams|Class_A_betalactamases|SHV	gi|41584427|gb|AY502000.1|1-861
Resfinder	Bla|SHV-5_9_AY502000|betalactams|Class_A_betalactamases|SHV	blaSHV-5_9_AY502000
ARG-ANNOT	gi|223635890|emb|AM941844.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-98:AM922304:1-861:861
CARD	gi|223635890|emb|AM941844.1|betalactams|Class_A_betalactamases|SHV	@phgb|AM941844|0-861|ARO:3001336|SHV-98 [Klebsiella pneumoniae]
Lahey	gi|223635890|emb|AM941844.1|betalactams|Class_A_betalactamases|SHV	CAQ03503.1 AM941844.1:1-861
NCBI	gi|223635890|emb|AM941844.1|betalactams|Class_A_betalactamases|SHV	gi|218091980|emb|AM922304.1|1-861
Resfinder	gi|223635890|emb|AM941844.1|betalactams|Class_A_betalactamases|SHV	blaSHV-98_1_AM941844
ARG-ANNOT	Bla|L-1|AJ272109|1-888|888|betalactams|Class_B_betalactamases|L1	(Bla)L-1:AJ272109:1-888:888
CARD	Bla|L-1|AJ272109|1-888|888|betalactams|Class_B_betalactamases|L1	@phgb|AJ272109|0-888|ARO:3000582|L1 beta-lactamase [Stenotrophomonas maltophilia]
NCBI	Bla|L-1|AJ272109|1-888|888|betalactams|Class_B_betalactamases|L1	gi|6977947|emb|AJ272109.1|1-888 gi|346230956|gb|JF705927.1|1-29 gi|134133874|gb|EF126060.1|1-29 gi|134133856|gb|EF126051.1|1-29 gi|126149272|dbj|AB294547.1|1-29 gi|126149262|dbj|AB294542.1|1-29
NCBI	Tet|tetX_1_GU014535|Tetracyclines|Tetracycline_inactivation_enzymes|TETX	gi|291192074|gb|GU014535.1|6304-7470
Resfinder	Tet|tetX_1_GU014535|Tetracyclines|Tetracycline_inactivation_enzymes|TETX	tet(X)_1_GU014535
CARD	CARD|phgb|U97042|0-1218|ARO:3003009|ceoA|Multi-drug_resistance|Multi-drug_efflux_pumps|CEOA	@phgb|U97042|0-1218|ARO:3003009|ceoA [Burkholderia cepacia]
NCBI	CARD|phgb|U97042|0-1218|ARO:3003009|ceoA|Multi-drug_resistance|Multi-drug_efflux_pumps|CEOA	gi|2109269|gb|U97042.1|BCU97042|1-1219
ARG-ANNOT	Bla|CMY-16|FM995219|3672-4817|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-16:FM995219:3672-4817:1146
CARD	Bla|CMY-16|FM995219|3672-4817|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AJ781421|0-1146|ARO:3002027|CMY-16 [Proteus mirabilis]
Lahey	Bla|CMY-16|FM995219|3672-4817|1146|betalactams|Class_C_betalactamases|CMY	CAH03679.1 AJ781421.1:1-1146
NCBI	Bla|CMY-16|FM995219|3672-4817|1146|betalactams|Class_C_betalactamases|CMY	gi|374413489|gb|JN687470.1|60681-61826 gi|321399603|emb|FM995219.1|4817-3672 gi|69608258|emb|AJ781421.1|1-1146
Resfinder	Bla|CMY-16|FM995219|3672-4817|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-16_1_FM995219
ARG-ANNOT	Bla|CARB-5|AF135373|12-908|897|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-5:AF135373:12-908:897
CARD	Bla|CARB-5|AF135373|12-908|897|betalactams|Class_A_betalactamases|CARB	@phgb|AF135373|11-908|ARO:3002244|CARB-5 [Acinetobacter calcoaceticus subsp. anitratus]
Lahey	Bla|CARB-5|AF135373|12-908|897|betalactams|Class_A_betalactamases|CARB	AAF61417.1 AF135373.1:12-908
NCBI	Bla|CARB-5|AF135373|12-908|897|betalactams|Class_A_betalactamases|CARB	gi|7381164|gb|AF135373.1|AF135373|12-908
Resfinder	Bla|CARB-5|AF135373|12-908|897|betalactams|Class_A_betalactamases|CARB	blaCARB-5_1_AF135373
ARG-ANNOT	gi|325560583|gb|HQ913565.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-106:HQ913565:1-870:870
CARD	gi|325560583|gb|HQ913565.1|betalactams|Class_A_betalactamases|CTX	@phgb|HQ913565|0-870|ARO:3001966|CTX-M-106 [Escherichia coli]
NCBI	gi|325560583|gb|HQ913565.1|betalactams|Class_A_betalactamases|CTX	gi|325560583|gb|HQ913565.1|1-870
Resfinder	gi|325560583|gb|HQ913565.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-106_1_HQ913565
NCBI	gi|407731510|gb|JX440349.1|betalactams|Class_C_betalactamases|CMY	gi|407731510|gb|JX440349.1|1027-2255
ARG-ANNOT	Bla|A2|NC_010410|2507740-2509014|1275|betalactams|Class_A_betalactamases|BLAA	(Bla)BlaA2:NC_010410:2507740-2509014:1275
NCBI	Bla|A2|NC_010410|2507740-2509014|1275|betalactams|Class_A_betalactamases|BLAA	gi|939559781|gb|CP012952.1|2603235-2604509 gi|787858845|gb|CP008706.1|2616706-2617980 gi|751410783|gb|CP010781.1|1425452-1424178 gi|213985689|gb|CP001172.1|2429358-2430632 gi|213054530|gb|CP001182.1|1516943-1515669 gi|169147133|emb|CU459141.1|2507740-2509014 gi|88758891|emb|CT025947.2|1-1275
NCBI	gi|6007798|gb|AF188199.1|betalactams|Class_A_betalactamases|TEM	gi|6007798|gb|AF188199.1|AF188199|1-1080 gi|961666360|gb|KT185451.1|87740-87690
ARG-ANNOT	Bla|SHV-159|JX121126|1-858|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-159:JX121126:1-858:858
CARD	Bla|SHV-159|JX121126|1-858|858|betalactams|Class_A_betalactamases|SHV	@phgb|JX121126|0-858|ARO:3001198|SHV-159 [Klebsiella pneumoniae]
Lahey	Bla|SHV-159|JX121126|1-858|858|betalactams|Class_A_betalactamases|SHV	AFQ23965.1 JX121126.1:1-858
NCBI	Bla|SHV-159|JX121126|1-858|858|betalactams|Class_A_betalactamases|SHV	gi|401871176|gb|JX121126.1|1-858
Resfinder	Bla|SHV-159|JX121126|1-858|858|betalactams|Class_A_betalactamases|SHV	blaSHV-159_1_JX121126
ARG-ANNOT	Bla|CTX-M-54|DQ303459|2175-3050|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-54:DQ303459:2175-3050:876
CARD	Bla|CTX-M-54|DQ303459|2175-3050|876|betalactams|Class_A_betalactamases|CTX	@phgb|DQ303459|2174-3050|ARO:3001916|CTX-M-54 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-54|DQ303459|2175-3050|876|betalactams|Class_A_betalactamases|CTX	ABC18328.3 DQ303459.3:2175-3050
NCBI	Bla|CTX-M-54|DQ303459|2175-3050|876|betalactams|Class_A_betalactamases|CTX	gi|90019040|gb|DQ303459.3|2175-3050
Resfinder	Bla|CTX-M-54|DQ303459|2175-3050|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-54_1_DQ303459
ARG-ANNOT	1284|X77455.1|X77455|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-1:X77455:701-1849:1149
CARD	1284|X77455.1|X77455|betalactams|Class_C_betalactamases|FOX	@phgb|X77455|700-1849|ARO:3002155|FOX-1 [Klebsiella pneumoniae]
Lahey	1284|X77455.1|X77455|betalactams|Class_C_betalactamases|FOX	CAA54602.1 X77455.1:701-1849
NCBI	1284|X77455.1|X77455|betalactams|Class_C_betalactamases|FOX	gi|453214|emb|X77455.1|701-1849
Resfinder	1284|X77455.1|X77455|betalactams|Class_C_betalactamases|FOX	blaFOX-1_1_X77455
NCBI	Bla|mecA_15_AB505628|betalactams|Penicillin_binding_protein|MECA	gi|985566378|dbj|LC068959.1|23781-25790 gi|985563902|dbj|AB721404.1|36931-38940 gi|984671414|emb|LT009690.1|41288-43297 gi|974697948|dbj|AP017320.1|44031-46040 gi|941146344|gb|CP007676.1|39577-41586 gi|941142962|gb|CP007672.1|39745-41754 gi|941139768|gb|CP007657.1|39744-41753 gi|937132516|gb|KT316803.1|4363-6372 gi|908230075|gb|CP009676.1|44285-46294 gi|899756207|gb|CP012119.1|1886676-1884667
Resfinder	Bla|mecA_15_AB505628|betalactams|Penicillin_binding_protein|MECA	mecA_15_AB505628
CARD	gi|614461916|gb|KJ020574.1|betalactams|Class_A_betalactamases|CTX	@phgb|KJ020574|244-1120|ARO:3002006|CTX-M-148 [Escherichia coli]
Lahey	gi|614461916|gb|KJ020574.1|betalactams|Class_A_betalactamases|CTX	AHX39589.1 KJ020574.1:245-1120
NCBI	gi|614461916|gb|KJ020574.1|betalactams|Class_A_betalactamases|CTX	gi|695228199|ref|NG_041751.1|245-1120
CARD	gi|757399517|gb|KP050491.1|betalactams|Class_A_betalactamases|TEM	@phgb|KP050491|0-861|ARO:3001391|TEM-214 [Escherichia coli]
Lahey	gi|757399517|gb|KP050491.1|betalactams|Class_A_betalactamases|TEM	AJO16044.1 KP050491.1:1-861
NCBI	gi|757399517|gb|KP050491.1|betalactams|Class_A_betalactamases|TEM	gi|757399517|gb|KP050491.1|1-861
CARD	CARD|phgb|NC_002516|4705955-4706402|ARO:3000806|mexG|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXG	@phgb|NC_002516|4705955-4706402|ARO:3000806|mexG [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516|4705955-4706402|ARO:3000806|mexG|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXG	gi|984361056|gb|CP008873.1|575232-575679 gi|975043142|gb|CP013989.1|815997-815550 gi|974353108|gb|CP008870.1|256433-255986 gi|974347073|gb|CP008869.1|5294398-5294845 gi|974341323|gb|CP008868.1|2450403-2449956 gi|974335511|gb|CP008867.1|3287485-3287038 gi|974327848|gb|CP008866.1|2673542-2673989 gi|974319461|gb|CP008865.1|3576324-3575877 gi|974311447|gb|CP008863.1|4414035-4413588 gi|974290783|gb|CP008862.1|3536856-3537303
NCBI	Sul|NC_011586.7045208|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|806639039|gb|KM972598.1|3988-4827 gi|806639024|gb|KM972596.1|3992-4831 gi|213054530|gb|CP001182.1|315605-316444 gi|974751547|gb|KU130294.1|233473-234001 gi|982189197|gb|CP013993.1|5430539-5431065
ARG-ANNOT	Gly|VanC3|AY033764|26-1078|1053|Glycopeptides|VanC-type_resistance_protein|VANC	(Gly)VanC3:AY033764:26-1078:1053
NCBI	Gly|VanC3|AY033764|26-1078|1053|Glycopeptides|VanC-type_resistance_protein|VANC	gi|18476137|gb|AY033764.1|26-1078 gi|624701|gb|L29639.1|ENEVANCRF|1-591
ARG-ANNOT	gi|257152901|emb|AJ555823.2|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-15:AJ555823:1-1146:1146
CARD	gi|257152901|emb|AJ555823.2|betalactams|Class_C_betalactamases|CMY	@phgb|AJ555823|0-1146|ARO:3002026|CMY-15 [Proteus mirabilis]
Lahey	gi|257152901|emb|AJ555823.2|betalactams|Class_C_betalactamases|CMY	CAD88477.1 AJ555823.2:1-1146
NCBI	gi|257152901|emb|AJ555823.2|betalactams|Class_C_betalactamases|CMY	gi|257152901|emb|AJ555823.2|1-1146
Resfinder	gi|257152901|emb|AJ555823.2|betalactams|Class_C_betalactamases|CMY	blaCMY-15_1_AJ555823
NCBI	Flq|CP000647.1|gene2640|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|150953431|gb|CP000647.1|2905657-2903024
ARG-ANNOT	Bla|OKP-B-8|AM051157|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-8:AM051157:1-861:861
CARD	Bla|OKP-B-8|AM051157|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051157|0-861|ARO:3002441|OKP-B-8 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-8|AM051157|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655093|emb|AM051157.1|1-861
Resfinder	Bla|OKP-B-8|AM051157|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-8_1_AM051157
ARG-ANNOT	937|M94066.1|SMAAACGIC|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Ic:M94066:1554-1994:441
CARD	937|M94066.1|SMAAACGIC|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|M94066|1553-1994|ARO:3002549|AAC(6')-Ic [Serratia marcescens]
NCBI	937|M94066.1|SMAAACGIC|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|152813|gb|M94066.1|SMAAACGIC|1554-1994
Resfinder	937|M94066.1|SMAAACGIC|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Ic_1_M94066
CARD	CARD|phgb|NC_000918|1269540-1270521|ARO:3003098|cphA1|betalactams|Class_B_betalactamases|CPHA	@phgb|NC_000918|1269540-1270521|ARO:3003098|cphA1 [Aquifex aeolicus VF5]
NCBI	CARD|phgb|NC_000918|1269540-1270521|ARO:3003098|cphA1|betalactams|Class_B_betalactamases|CPHA	gi|6626248|gb|AE000657.1|1269541-1270522
CARD	Bla|OXA-326_1_KF203100|betalactams|Class_D_betalactamases|OXA	@phgb|KF203100|0-822|ARO:3001514|OXA-326 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-326_1_KF203100|betalactams|Class_D_betalactamases|OXA	AGW16408.1 KF203100.1:1-822
NCBI	Bla|OXA-326_1_KF203100|betalactams|Class_D_betalactamases|OXA	gi|544207399|gb|KF203100.1|1-822
Resfinder	Bla|OXA-326_1_KF203100|betalactams|Class_D_betalactamases|OXA	blaOXA-326_1_KF203100
ARG-ANNOT	gi|395628217|gb|JX050178.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-199:JX050178:1-853:853
CARD	gi|395628217|gb|JX050178.1|betalactams|Class_A_betalactamases|TEM	@phgb|JX050178|0-852|ARO:3001058|TEM-199 [Proteus mirabilis]
NCBI	gi|395628217|gb|JX050178.1|betalactams|Class_A_betalactamases|TEM	gi|395628217|gb|JX050178.1|1-853
Resfinder	gi|395628217|gb|JX050178.1|betalactams|Class_A_betalactamases|TEM	blaTEM-199_1_JX050178
NCBI	1454|J01764.1|PT1CG|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETK	gi|408684196|gb|JX893516.1|956-1843 gi|51493750|gb|AY672108.1|9124-8237 gi|1045523|gb|U36910.1|SAU36910|1932-2819 gi|151679|gb|J01764.1|PT1CG|956-1843
Resfinder	1454|J01764.1|PT1CG|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETK	tet(K)_5_J01764
NCBI	Bla|CTX-M-24_1_EU921824|betalactams|Class_A_betalactamases|CTX	gi|668347719|dbj|AB976600.1|1214-2089 gi|283466726|emb|FN594520.1|7075-6200 gi|282192949|gb|GU226842.1|1-876 gi|221149286|gb|EU418918.1|64-939 gi|197215894|gb|EU921824.1|553-1428
Resfinder	Bla|CTX-M-24_1_EU921824|betalactams|Class_A_betalactamases|CTX	blaCTX-M-24_1_EU921824
CARD	CARD|phgb|AF117745|0-780|ARO:3001079|SHV-21|betalactams|Class_A_betalactamases|SHV	@phgb|AF117745|0-780|ARO:3001079|SHV-21 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF117745|0-780|ARO:3001079|SHV-21|betalactams|Class_A_betalactamases|SHV	gi|6979151|gb|AF117745.1|AF117745|1-780
ARG-ANNOT	Bla|OXA-242|JX025022|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-242:JX025022:1-825:825
CARD	Bla|OXA-242|JX025022|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|JX025022|0-825|ARO:3001680|OXA-242 [Acinetobacter baumannii]
Lahey	Bla|OXA-242|JX025022|1-825|825|betalactams|Class_D_betalactamases|OXA	AFO55202.1 JX025022.1:1-825
NCBI	Bla|OXA-242|JX025022|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|397648611|gb|JX025022.1|1-825
Resfinder	Bla|OXA-242|JX025022|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-242_1_JX025022
NCBI	Rif|FN543093.2|gene314|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|323575285|emb|FN543093.2|326770-330840
CARD	CARD|pvgb|AE000516|4318327-4319797|ARO:3003458|mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethionamide-resistant_monooxygenase_EthA|ETHA|RequiresSNPConfirmation	@pvgb|AE000516|4318327-4319797|ARO:3003458|mycobacterium tuberculosis ethA mutant conferring resistance to ethionamide [Mycobacterium tuberculosis CDC1551]
NCBI	CARD|pvgb|AE000516|4318327-4319797|ARO:3003458|mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethionamide-resistant_monooxygenase_EthA|ETHA|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|4340960-4342430 gi|984989958|gb|CP010339.1|4313910-4315380 gi|984985728|gb|CP010338.1|4331557-4333027 gi|984981517|gb|CP010337.1|4316249-4317719 gi|984972452|gb|CP010335.1|4334235-4335705 gi|984959134|gb|CP010332.1|4253016-4254486 gi|984954355|gb|CP010331.1|4275217-4276687 gi|984950177|gb|CP010330.1|4336379-4337849 gi|984945858|gb|CP010329.1|4343100-4344570 gi|971171538|gb|CP013741.1|4294590-4296060
NCBI	gi|407731518|gb|JX440351.1|betalactams|Class_C_betalactamases|CMY	gi|407731518|gb|JX440351.1|1027-2255
ARG-ANNOT	Bla|SHV-72|AM176547|31-891|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-72:AM176547:31-891:861
CARD	Bla|SHV-72|AM176547|31-891|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176547|30-891|ARO:3001126|SHV-72 [Klebsiella pneumoniae]
Lahey	Bla|SHV-72|AM176547|31-891|861|betalactams|Class_A_betalactamases|SHV	CAJ47127.2 AM176547.2:31-891
NCBI	Bla|SHV-72|AM176547|31-891|861|betalactams|Class_A_betalactamases|SHV	gi|160948434|emb|AM176547.2|31-891
Resfinder	Bla|SHV-72|AM176547|31-891|861|betalactams|Class_A_betalactamases|SHV	blaSHV-72_1_AM176547
NCBI	gi|78057321|gb|DQ223685.1|betalactams|Class_A_betalactamases|CTX	gi|78057321|gb|DQ223685.1|1-909
NCBI	Gly|VanA-Pt_3_DQ018710|Glycopeptides|VanA-type_resistance_protein|VANA	gi|50082936|gb|AY648035.1|1-1032 gi|66731632|gb|DQ018710.1|6070-7101
Resfinder	Gly|VanA-Pt_3_DQ018710|Glycopeptides|VanA-type_resistance_protein|VANA	VanPt_3_DQ018710
CARD	Phe|M58515.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|M58515|212-872|ARO:3002670|cat [Staphylococcus aureus RN4220]
NCBI	Phe|M58515.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|152980|gb|M58515.1|STACATA|213-872
CARD	CARD|phgb|AP009048|4306556-4307588|ARO:3003548|mdtN|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTN	@phgb|AP009048|4306556-4307588|ARO:3003548|mdtN [Escherichia coli str. K-12 substr. W3110];@phgb|NC_007779|4306556-4307588|ARO:3003548|mdtN [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|AP009048|4306556-4307588|ARO:3003548|mdtN|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTN	gi|985000614|gb|CP014225.1|2500167-2501198 gi|939732440|gb|CP011343.2|4283382-4284413 gi|939731527|gb|CP011342.2|4284068-4285099 gi|937526251|gb|CP012870.1|338575-337544 gi|937521852|gb|CP012869.1|338575-337544 gi|937517453|gb|CP012868.1|338575-337544 gi|932857508|emb|LN877770.1|103837-104868 gi|923416119|gb|CP011113.1|4261143-4262174 gi|857137982|gb|CP011495.1|880508-881539 gi|850013407|gb|CP011938.1|4187887-4188918
ARG-ANNOT	Flq|QnrB33|JN173055|36-680|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB33:JN173055:36-680:645
CARD	Flq|QnrB33|JN173055|36-680|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN173055|35-680|ARO:3002748|QnrB33 [Citrobacter braakii]
NCBI	Flq|QnrB33|JN173055|36-680|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|341873888|gb|JN173055.1|36-680
Resfinder	Flq|QnrB33|JN173055|36-680|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB33_1_JN173055
CARD	Mdr|NC_002516.2.880183|Multi-drug_resistance|MDR_regulator|NALD	@phgb|NC_002516|4006509-4007148|ARO:3000819|nalD [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.880183|Multi-drug_resistance|MDR_regulator|NALD	gi|984361056|gb|CP008873.1|6675551-6676189 gi|982189197|gb|CP013993.1|1716179-1715541 gi|975043142|gb|CP013989.1|1519756-1519118 gi|974359204|gb|CP008871.1|4374059-4374697 gi|974353108|gb|CP008870.1|1019059-1018421 gi|974347073|gb|CP008869.1|4510963-4511601 gi|974335511|gb|CP008867.1|3986425-3985787 gi|974327848|gb|CP008866.1|1978309-1978947 gi|974319461|gb|CP008865.1|4311596-4310958 gi|974282928|gb|CP008861.1|2168093-2168731
NCBI	Bla|AF491278.1|gene1|betalactams|Class_A_betalactamases|OXY	gi|23345325|gb|AF491278.1|123-1050
ARG-ANNOT	Bla|CMY-67|JQ711185|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-67:JQ711185:1028-2173:1146
CARD	Bla|CMY-67|JQ711185|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ711185|1027-2173|ARO:3002080|CMY-67 [Citrobacter freundii]
Lahey	Bla|CMY-67|JQ711185|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	AFK08541.1 JQ711185.1:1028-2173
NCBI	Bla|CMY-67|JQ711185|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	gi|387861052|gb|JQ711185.1|1028-2173
Resfinder	Bla|CMY-67|JQ711185|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-67_1_JQ711185
NCBI	gi|206813968|gb|FJ194944.1|betalactams|Class_A_betalactamases|SHV	gi|206813968|gb|FJ194944.1|1-1007
NCBI	Bla|AJ437107.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|25900616|emb|AJ437107.1|139-1069
NCBI	MLS|mphA_2_U36578|MLS|Macrolide_phosphotransferases|MPHA	gi|1574935|gb|U34344.1|ECU34344|432-1352 gi|1408169|gb|U36578.1|ECU36578|432-1352
Resfinder	MLS|mphA_2_U36578|MLS|Macrolide_phosphotransferases|MPHA	mph(A)_2_U36578
CARD	gi|544207395|gb|KF203098.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF203098|0-822|ARO:3001512|OXA-324 [Acinetobacter calcoaceticus]
Lahey	gi|544207395|gb|KF203098.1|betalactams|Class_D_betalactamases|OXA	AGW16406.1 KF203098.1:1-822
NCBI	gi|544207395|gb|KF203098.1|betalactams|Class_D_betalactamases|OXA	gi|544207395|gb|KF203098.1|1-822
Resfinder	gi|544207395|gb|KF203098.1|betalactams|Class_D_betalactamases|OXA	blaOXA-324_1_KF203098
NCBI	Tmt|dfrA14_1_Z50805|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|950038|emb|Z50805.1|72-545
Resfinder	Tmt|dfrA14_1_Z50805|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA14_1_Z50805
ARG-ANNOT	Bla|LCR-1|betalactams|Class_D_betalactamases|LCR1	(Bla)LCR-1 X56809:112-894:783
CARD	Bla|LCR-1|betalactams|Class_D_betalactamases|LCR1	@phgb|X56809|111-894|ARO:3002997|LCR-1 [Pseudomonas aeruginosa]
Lahey	Bla|LCR-1|betalactams|Class_D_betalactamases|LCR1	CAA40146.1 X56809.1:112-894
NCBI	Bla|LCR-1|betalactams|Class_D_betalactamases|LCR1	gi|1220464|gb|L36547.1|PSEMT|7549-8331 gi|695196608|ref|NG_034471.1|112-894
Resfinder	Bla|LCR-1|betalactams|Class_D_betalactamases|LCR1	blaLCR-1_1_X56809
CARD	gi|10946528|gb|AY008291.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY008291|0-769|ARO:3001427|OXA-33 [Pseudomonas aeruginosa]
NCBI	gi|10946528|gb|AY008291.1|betalactams|Class_D_betalactamases|OXA	gi|761589803|dbj|AP014651.1|327083-326315 gi|666688170|gb|KJ463833.1|21103-21871 gi|462078722|gb|KC310496.1|2160-2928 gi|355526407|gb|JN129451.1|1082-1850 gi|318066560|emb|FR771847.1|1498-2266 gi|300391780|gb|HM175874.1|913-1681 gi|300391780|gb|HM175874.1|100-174 gi|166178874|gb|EU380316.1|96-864 gi|38154309|gb|AY162283.2|1137-1905 gi|10946528|gb|AY008291.1|1-769 gi|695211314|ref|NG_036058.1|1310-2078 gi|695211314|ref|NG_036058.1|497-571
ARG-ANNOT	MLS|VgaA|M90056|909-2477|1569|MLS|ABC_transporter|VGA	(MLS)VgaA:M90056:909-2477:1569
NCBI	MLS|VgaA|M90056|909-2477|1569|MLS|ABC_transporter|VGA	gi|695199383|ref|NG_035214.1|2437-4005 gi|153124|gb|M90056.1|STAVGA|909-2477 gi|641688293|emb|HG799495.1|70853-70880
Resfinder	MLS|VgaA|M90056|909-2477|1569|MLS|ABC_transporter|VGA	vga(A)_1_M90056
NCBI	gi|300510839|gb|HM245379.1|betalactams|Class_B_betalactamases|IND	gi|300510839|gb|HM245379.1|1-877
ARG-ANNOT	Bla|SHV-16|AF072684|118-993|876|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-16:AF072684:118-993:876
CARD	Bla|SHV-16|AF072684|118-993|876|betalactams|Class_A_betalactamases|SHV	@phgb|AF072684|117-993|ARO:3001075|SHV-16 [Klebsiella pneumoniae]
Lahey	Bla|SHV-16|AF072684|118-993|876|betalactams|Class_A_betalactamases|SHV	AAC98092.2 AF072684.2:118-993
NCBI	Bla|SHV-16|AF072684|118-993|876|betalactams|Class_A_betalactamases|SHV	gi|15718690|gb|AF072684.2|AF072684|118-993
Resfinder	Bla|SHV-16|AF072684|118-993|876|betalactams|Class_A_betalactamases|SHV	blaSHV-16_1_AF072684
ARG-ANNOT	gi|360040233|gb|JN861780.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-212:JN861780:1-825:825
CARD	gi|360040233|gb|JN861780.1|betalactams|Class_D_betalactamases|OXA	@phgb|JN861780|0-825|ARO:3001711|OXA-212 [Acinetobacter johnsonii]
Lahey	gi|360040233|gb|JN861780.1|betalactams|Class_D_betalactamases|OXA	AEV91551.1 JN861780.1:1-825
NCBI	gi|360040233|gb|JN861780.1|betalactams|Class_D_betalactamases|OXA	gi|360040233|gb|JN861780.1|1-825
Resfinder	gi|360040233|gb|JN861780.1|betalactams|Class_D_betalactamases|OXA	blaOXA-212_1_JN861780
ARG-ANNOT	Bla|OXA-179|HM570035|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-179:HM570035:1-825:825
CARD	Bla|OXA-179|HM570035|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HM570035|0-825|ARO:3001473|OXA-179 [Acinetobacter baumannii]
Lahey	Bla|OXA-179|HM570035|1-825|825|betalactams|Class_D_betalactamases|OXA	ADM26744.1 HM570035.1:1-825
NCBI	Bla|OXA-179|HM570035|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|304368189|gb|HM570035.1|1-825
Resfinder	Bla|OXA-179|HM570035|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-179_1_HM570035
ARG-ANNOT	Bla|IMP-24|EF192154|1-741|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-24:EF192154:1-741:741
CARD	Bla|IMP-24|EF192154|1-741|741|betalactams|Class_B_betalactamases|IMP	@phgb|EF192154|0-741|ARO:3002215|IMP-24 [Serratia marcescens]
Lahey	Bla|IMP-24|EF192154|1-741|741|betalactams|Class_B_betalactamases|IMP	ABM68358.1 EF192154.1:1-741
NCBI	Bla|IMP-24|EF192154|1-741|741|betalactams|Class_B_betalactamases|IMP	gi|122934823|gb|EF192154.1|1-741
Resfinder	Bla|IMP-24|EF192154|1-741|741|betalactams|Class_B_betalactamases|IMP	blaIMP-24_1_EF192154
CARD	CARD|phgb|AF117747|0-780|ARO:3001081|SHV-23|betalactams|Class_A_betalactamases|SHV	@phgb|AF117747|0-780|ARO:3001081|SHV-23 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF117747|0-780|ARO:3001081|SHV-23|betalactams|Class_A_betalactamases|SHV	gi|6979155|gb|AF117747.1|AF117747|1-780
CARD	CARD|phgb|EU408351|16572-17454|ARO:3002511|LRA-12|betalactams|Class_B_betalactamases|LRA	@phgb|EU408351|16572-17454|ARO:3002511|LRA-12 [uncultured bacterium BLR12]
NCBI	CARD|phgb|EU408351|16572-17454|ARO:3002511|LRA-12|betalactams|Class_B_betalactamases|LRA	gi|169647639|gb|EU408351.1|16573-17455
ARG-ANNOT	AGly|Aac6-Iy|AF144880|3452-3979|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iy:AF144880:3452-3979:438
CARD	AGly|Aac6-Iy|AF144880|3452-3979|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF144880|3541-3979|ARO:3002569|AAC(6')-Iy [Salmonella enterica subsp. enterica serovar Enteritidis]
NCBI	AGly|Aac6-Iy|AF144880|3452-3979|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|885002534|gb|CP012038.1|276187-276624 gi|808197850|gb|CP007559.1|2256000-2255563 gi|767847001|gb|CP010283.1|2008081-2007644 gi|767842734|gb|CP010282.1|2121881-2121444 gi|767838360|gb|CP010281.1|1441904-1441467 gi|767833982|gb|CP010279.1|1286544-1286981 gi|767829574|gb|CP010284.1|4178644-4179081 gi|744788240|gb|CP010280.1|1065056-1065493 gi|696593549|gb|CP009565.1|1054942-1054505 gi|696581462|gb|CP009561.1|3605231-3605668
CARD	gi|698174183|gb|KM087846.1|betalactams|Class_C_betalactamases|CMY	@phgb|KM087846|0-1146|ARO:3002125|CMY-114 [Citrobacter freundii]
Lahey	gi|698174183|gb|KM087846.1|betalactams|Class_C_betalactamases|CMY	AIT76099.1 KM087846.1:1-1146
NCBI	gi|698174183|gb|KM087846.1|betalactams|Class_C_betalactamases|CMY	gi|698174183|gb|KM087846.1|1-1146
ARG-ANNOT	Bla|TEM-105|AF516720|215-1075|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-105:AF516720:215-1075:861
CARD	Bla|TEM-105|AF516720|215-1075|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF516720|214-1075|ARO:3000968|TEM-105 [Escherichia coli]
Lahey	Bla|TEM-105|AF516720|215-1075|861|betalactams|Class_A_betalactamases|TEM	AAM61953.1 AF516720.1:215-1075
NCBI	Bla|TEM-105|AF516720|215-1075|861|betalactams|Class_A_betalactamases|TEM	gi|21541784|gb|AF516720.1|215-1075
Resfinder	Bla|TEM-105|AF516720|215-1075|861|betalactams|Class_A_betalactamases|TEM	blaTEM-105_1_AF516720
ARG-ANNOT	gi|247720642|gb|GQ202694.1|betalactams|Class_A_betalactamases|BEL	(Bla)BEL-3:GQ202694:1-852:852
CARD	gi|247720642|gb|GQ202694.1|betalactams|Class_A_betalactamases|BEL	@phgb|GQ202694|0-852|ARO:3002387|BEL-3 [Pseudomonas aeruginosa]
Lahey	gi|247720642|gb|GQ202694.1|betalactams|Class_A_betalactamases|BEL	ACT09140.1 GQ202694.1:1-852
NCBI	gi|247720642|gb|GQ202694.1|betalactams|Class_A_betalactamases|BEL	gi|247720642|gb|GQ202694.1|1-852
Resfinder	gi|247720642|gb|GQ202694.1|betalactams|Class_A_betalactamases|BEL	blaBEL-3_1_GQ202694
NCBI	Bla|SHV-1_5_GQ407119|betalactams|Class_A_betalactamases|SHV	gi|979522909|gb|CP014008.1|2497261-2496401 gi|257043755|gb|GQ407119.1|1-861
Resfinder	Bla|SHV-1_5_GQ407119|betalactams|Class_A_betalactamases|SHV	blaSHV-1_5_GQ407119
ARG-ANNOT	Bla|GOB-17|AY899332|1-873|873|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-17:AY899332:1-873:873
NCBI	Bla|GOB-17|AY899332|1-873|873|betalactams|Class_B_betalactamases|GOB	gi|58802940|gb|AY899332.1|1-873
Resfinder	Bla|GOB-17|AY899332|1-873|873|betalactams|Class_B_betalactamases|GOB	blaGOB-17_1_AY899332
ARG-ANNOT	Bla|CTX-M-28|AJ549244|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-28:AJ549244:1-876:876
CARD	Bla|CTX-M-28|AJ549244|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AJ549244|0-876|ARO:3001890|CTX-M-28 [Escherichia coli]
Lahey	Bla|CTX-M-28|AJ549244|1-876|876|betalactams|Class_A_betalactamases|CTX	CAD70280.1 AJ549244.1:1-876
NCBI	Bla|CTX-M-28|AJ549244|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|28881687|emb|AJ549244.1|1-876 gi|170676133|gb|EU531510.1|1-874
Resfinder	Bla|CTX-M-28|AJ549244|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-28_6_AJ549244
ARG-ANNOT	Bla|GOB-11|AY647248|1-879|879|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-11:AY647248:1-879:879
NCBI	Bla|GOB-11|AY647248|1-879|879|betalactams|Class_B_betalactamases|GOB	gi|49798146|gb|AY647248.1|1-879
Resfinder	Bla|GOB-11|AY647248|1-879|879|betalactams|Class_B_betalactamases|GOB	blaGOB-11_1_AY647248
NCBI	Tet|NC_010558.1.6276025|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETD	gi|953946047|emb|LN908249.1|1548467-1548051 gi|951285167|emb|LN869922.1|884081-883665 gi|949881887|gb|CP012931.1|27029-27445 gi|917657445|gb|KR827684.1|36453-36037 gi|909636483|emb|LN850163.1|116332-115916 gi|857118485|gb|CP011223.1|1685037-1685453 gi|834763093|gb|CP006636.1|350527-350111 gi|828386350|gb|CP006635.1|152868-152452 gi|825091926|gb|KP789020.1|133878-133462 gi|808208366|gb|CP009232.1|107604-108020
Lahey	1333|KP264124.1|KP264124|betalactams|Class_D_betalactamases|OXA	AKF41839.1 KP264124.1:77-898
NCBI	1333|KP264124.1|KP264124|betalactams|Class_D_betalactamases|OXA	gi|817490720|gb|KP264124.1|77-898
NCBI	Met|nimI_1_FJ940883|Metronidazole|nim_nitroimidazole_reductase|NIMI	gi|238069258|gb|FJ940883.1|1-457
Resfinder	Met|nimI_1_FJ940883|Metronidazole|nim_nitroimidazole_reductase|NIMI	nimI_1_FJ940883
CARD	MLS|lsaA_2_AY58982|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	@phgb|AY587982|309-1806|ARO:3000300|lsaA [Enterococcus faecalis]
NCBI	MLS|lsaA_2_AY58982|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	gi|48727553|gb|AY587982.1|310-1806
Resfinder	MLS|lsaA_2_AY58982|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	lsa(A)_2_AY58982
NCBI	gi|21464484|gb|AY101578.1|betalactams|Class_A_betalactamases|TEM	gi|21464484|gb|AY101578.1|1-1080
ARG-ANNOT	Bla|CMY-70|JX440350|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-70:JX440350:1027-2172:1146
CARD	Bla|CMY-70|JX440350|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JX440350|1026-2172|ARO:3002083|CMY-70 [Citrobacter braakii]
Lahey	Bla|CMY-70|JX440350|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	AFU25635.1 JX440350.1:1027-2172
NCBI	Bla|CMY-70|JX440350|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	gi|407731514|gb|JX440350.1|1027-2172
Resfinder	Bla|CMY-70|JX440350|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-70_1_JX440350
ARG-ANNOT	Bla|SHV-143|JQ341060|882-1742|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-143:JQ341060:882-1742:861
Lahey	Bla|SHV-143|JQ341060|882-1742|861|betalactams|Class_A_betalactamases|SHV	AFQ32277.1 JQ341060.1:1742-882
NCBI	Bla|SHV-143|JQ341060|882-1742|861|betalactams|Class_A_betalactamases|SHV	gi|408834082|gb|JQ341060.1|1742-882
NCBI	Flq|HE999704.1|gene7|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|584269433|emb|HG813249.1|287133-289661 gi|441472679|emb|HE999705.1|8065-10593 gi|441469547|emb|HE999704.1|8065-10593
NCBI	Sul|sul1_26_AY524415|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|45332239|gb|AY524415.2|9740-10579
Resfinder	Sul|sul1_26_AY524415|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_26_AY524415
NCBI	Mdr|CP000647.1|gene956|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation	gi|150953431|gb|CP000647.1|1081235-1080309
ARG-ANNOT	1211|U50278.1|ECU50278|betalactams|Class_A_betalactamases|IMI	(Bla)IMI-1:ECU50278:1264-2142:879
CARD	1211|U50278.1|ECU50278|betalactams|Class_A_betalactamases|IMI	@phgb|U50278|1263-2142|ARO:3001858|IMI-1 [Enterobacter cloacae]
Lahey	1211|U50278.1|ECU50278|betalactams|Class_A_betalactamases|IMI	AAA93461.1 U50278.1:1264-2142
NCBI	1211|U50278.1|ECU50278|betalactams|Class_A_betalactamases|IMI	gi|1245353|gb|U50278.1|ECU50278|1264-2142
Resfinder	1211|U50278.1|ECU50278|betalactams|Class_A_betalactamases|IMI	blaIMI-1_1_U50278
ARG-ANNOT	105|FR772051.1|FR772051|MLS|ABC_transporter|VGA	(MLS)VgaE:FR772051:8741-10315:1575
CARD	105|FR772051.1|FR772051|MLS|ABC_transporter|VGA	@phgb|FR772051|8740-10315|ARO:3002833|vgaE [Staphylococcus aureus subsp. aureus ST398]
NCBI	105|FR772051.1|FR772051|MLS|ABC_transporter|VGA	gi|342186818|emb|FR772051.1|8741-10315
Resfinder	105|FR772051.1|FR772051|MLS|ABC_transporter|VGA	vga(E)_1_FR772051
ARG-ANNOT	179|M16217.1|PNS1CG|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETK	(Tet)TetK:M16217:305-1684:1380
CARD	179|M16217.1|PNS1CG|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETK	@phgb|NC_013452|2917-4297|ARO:3000178|tetK [Staphylococcus aureus subsp. aureus ED98]
NCBI	179|M16217.1|PNS1CG|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETK	gi|961572904|gb|CP013619.1|61555-62934 gi|961570270|gb|CP013616.1|61548-62927 gi|941142334|gb|CP007658.1|23032-21653 gi|929861413|gb|CP010403.1|27400-26021 gi|752851829|gb|KM369884.1|27353-28732 gi|696158520|gb|KM281803.1|216-1595 gi|696158517|gb|KM281802.1|216-1595 gi|658305214|gb|KF290957.1|1115-2494 gi|553025200|gb|KF593809.1|27850-29229 gi|549537971|gb|KF593810.1|11240-12619
Resfinder	179|M16217.1|PNS1CG|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETK	tet(K)_4_U38428
ARG-ANNOT	Gly|VanH-Ao1|AF060799|534-1580|1047|Glycopeptides|VanA-type_resistance_protein|VANHA	(Gly)VanH-Ao1:AF060799:534-1580:1047
NCBI	Gly|VanH-Ao1|AF060799|534-1580|1047|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|4405960|gb|AF060799.1|AF060799|534-1580
Resfinder	Gly|VanH-Ao1|AF060799|534-1580|1047|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-Ao1_8_AF060799
NCBI	gi|337729566|gb|JF966749.1|betalactams|Class_A_betalactamases|CTX	gi|337729566|gb|JF966749.1|1-1033
NCBI	Sul|sul2_13_AJ289135|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|16605601|emb|AJ289135.1|3990-4805
Resfinder	Sul|sul2_13_AJ289135|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_13_AJ289135
NCBI	gi|388564831|gb|JQ733572.1|betalactams|Class_C_betalactamases|CMY	gi|388564831|gb|JQ733572.1|1028-2255
Resfinder	Tet|tetJ_1_ACLE01000065|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETJ	tet(J)_1_ACLE01000065
NCBI	gi|1841437|emb|Y11068.1|betalactams|Class_C_betalactamases|FOX	gi|1841437|emb|Y11068.1|1-1183 gi|927028715|dbj|LC072710.1|606-1755
ARG-ANNOT	Bla|OKP-A-16|FJ755840|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-16:FJ755840:1-861:861
CARD	Bla|OKP-A-16|FJ755840|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|FJ755840|0-861|ARO:3002433|OKP-A-16 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-16|FJ755840|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|224814395|gb|FJ755840.1|1-861
Resfinder	Bla|OKP-A-16|FJ755840|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-16_1_FJ755840
NCBI	gi|15624078|gb|AF203816.1|betalactams|Class_A_betalactamases|TEM	gi|695208184|ref|NG_035490.1|1-1105
ARG-ANNOT	Bla|OCH-5|AJ295343|1-1173|1173|betalactams|Class_C_betalactamases|OCH	(Bla)OCH-5:AJ295343:1-1173:1173
CARD	Bla|OCH-5|AJ295343|1-1173|1173|betalactams|Class_C_betalactamases|OCH	@phgb|AJ295343|0-1173|ARO:3002518|OCH-5 [Ochrobactrum anthropi]
NCBI	Bla|OCH-5|AJ295343|1-1173|1173|betalactams|Class_C_betalactamases|OCH	gi|11544704|emb|AJ295343.1|1-1173
Resfinder	Bla|OCH-5|AJ295343|1-1173|1173|betalactams|Class_C_betalactamases|OCH	blaOCH-5_1_AJ295343
NCBI	Sul|sul1_9_AY963803|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|930190865|emb|LN555650.1|96536-95685 gi|930190865|emb|LN555650.1|259231-258394 gi|930189590|emb|HG530658.1|96281-95430 gi|930189590|emb|HG530658.1|194939-194102 gi|761589803|dbj|AP014651.1|316957-316106 gi|761589803|dbj|AP014651.1|5302118-5302969 gi|761589803|dbj|AP014651.1|324887-324361 gi|761589803|dbj|AP014651.1|5294188-5294714 gi|752502612|dbj|AP014611.1|152913-153764 gi|752502612|dbj|AP014611.1|147008-147845 gi|723243434|gb|CP009868.1|114218-113367 gi|674643852|emb|LM997414.1|1025-1876 gi|672940377|gb|AY963803.6|31568-32419 gi|672940377|gb|AY963803.6|23638-24164 gi|666688170|gb|KJ463833.1|32778-33629 gi|666688170|gb|KJ463833.1|24848-25374 gi|662716651|gb|CP008824.1|213061-213912 gi|662716651|gb|CP008824.1|271309-272146 gi|662716651|gb|CP008824.1|275283-276120 gi|640855459|gb|CP007732.1|165393-166244 gi|640855459|gb|CP007732.1|223641-224478
Resfinder	Sul|sul1_9_AY963803|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_9_AY963803
NCBI	gi|300863226|gb|HM367709.1|betalactams|Class_B_betalactamases|IND	gi|300863226|gb|HM367709.1|1-820
CARD	Bla|DQ157752.1|gene2|betalactams|Class_A_betalactamases|CARB	@phgb|DQ157752|797-1664|ARO:3002241|CARB-2 [Escherichia coli]
NCBI	Bla|DQ157752.1|gene2|betalactams|Class_A_betalactamases|CARB	gi|73913580|gb|DQ157752.1|798-1664
NCBI	Gly|VanY-A_1_FJ866609|Glycopeptides|VanA-type_accessory_protein|VANYA	gi|975002886|gb|CP013996.1|5097-5987 gi|925192758|gb|CP012594.1|31666-30776 gi|830872341|gb|KR349520.1|11068-11958 gi|816206772|gb|KR047792.1|11067-11957 gi|695226492|ref|NG_041525.1|11337-12227 gi|359465430|dbj|AB611033.1|11358-10468 gi|695224489|ref|NG_041086.1|3134-2244 gi|304325020|gb|GQ484956.1|31045-31935 gi|304324978|gb|GQ484955.1|29957-30847 gi|304324937|gb|GQ484954.1|25282-26172
Resfinder	Gly|VanY-A_1_FJ866609|Glycopeptides|VanA-type_accessory_protein|VANYA	VanY-A_1_FJ866609
ARG-ANNOT	1479|HF953351.1|HF953351|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	(AGly)StrB:FJ474091:264-1100:837
CARD	1479|HF953351.1|HF953351|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	@phgb|JF916464|1301-2138|ARO:3002660|APH(6)-Id [Escherichia coli]
NCBI	1479|HF953351.1|HF953351|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|984686374|gb|HQ700358.2|19505-18669 gi|974751547|gb|KU130294.1|218806-217970 gi|974751143|gb|KU238092.1|9309-8473 gi|981191958|emb|LN999997.1|2510228-2511064 gi|975007785|gb|CP010832.1|2825-1989 gi|971497891|gb|CP012901.1|3692593-3693429 gi|971493847|gb|CP010351.1|34258-35094 gi|971339514|gb|CP006662.2|53242-52406 gi|873464424|gb|KR014106.1|35120-35956 gi|959153704|gb|CP012993.1|21780-22616
Resfinder	1479|HF953351.1|HF953351|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	strB_1_M96392
CARD	gi|586619660|gb|KF944358.1|betalactams|Class_A_betalactamases|TEM	@phgb|KF944358|0-861|ARO:3001393|TEM-216 [Escherichia coli]
Lahey	gi|586619660|gb|KF944358.1|betalactams|Class_A_betalactamases|TEM	AHJ78622.1 KF944358.1:1-861
NCBI	gi|586619660|gb|KF944358.1|betalactams|Class_A_betalactamases|TEM	gi|586619660|gb|KF944358.1|1-861
CARD	CARD|phgb|NC_010611|1672368-1673193|ARO:3001615|OXA-66|betalactams|Class_D_betalactamases|OXA	@phgb|NC_010611|1672368-1673193|ARO:3001615|OXA-66 [Acinetobacter baumannii ACICU]
NCBI	CARD|phgb|NC_010611|1672368-1673193|ARO:3001615|OXA-66|betalactams|Class_D_betalactamases|OXA	gi|984881271|gb|CP014215.1|1410419-1411244 gi|974022331|gb|CP013924.1|2342841-2342016 gi|827403829|gb|CP010779.1|2269387-2268562 gi|803657307|gb|CP007535.2|3679542-3678717 gi|615556143|gb|CP007577.1|3208327-3207502 gi|586958174|gb|CP006963.1|1761164-1761989 gi|546200742|dbj|AP013357.1|2326165-2325340 gi|522344435|gb|CP003849.1|1766821-1767646 gi|522324570|gb|CP003846.1|2269619-2268794 gi|407899266|gb|CP003856.1|2027777-2028602
ARG-ANNOT	Bla|SHV-25|AF208796|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-25:AF208796:1-861:861
CARD	Bla|SHV-25|AF208796|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF208796|0-861|ARO:3001083|SHV-25 [Klebsiella pneumoniae]
Lahey	Bla|SHV-25|AF208796|1-861|861|betalactams|Class_A_betalactamases|SHV	AAF37209.2 AF208796.2:1-861
NCBI	Bla|SHV-25|AF208796|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|8052553|gb|AF208796.2|AF208796|1-861
Resfinder	Bla|SHV-25|AF208796|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-25_1_GU064391
ARG-ANNOT	Bla|LEN-7|AJ635425|1-789|789|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-7:AJ635425:1-789:789
CARD	Bla|LEN-7|AJ635425|1-789|789|betalactams|Class_A_betalactamases|LEN	@phgb|AJ635425|0-789|ARO:3002457|LEN-7 [Klebsiella pneumoniae]
NCBI	Bla|LEN-7|AJ635425|1-789|789|betalactams|Class_A_betalactamases|LEN	gi|46309225|emb|AJ635425.1|1-789
Resfinder	Bla|LEN-7|AJ635425|1-789|789|betalactams|Class_A_betalactamases|LEN	blaLEN7_1_AJ635425
ARG-ANNOT	Bla|IND-10|GU206353|19-738|720|betalactams|Class_B_betalactamases|IND	(Bla)IND-10:GU206353:19-738:720
CARD	Bla|IND-10|GU206353|19-738|720|betalactams|Class_B_betalactamases|IND	@phgb|GU206353|18-738|ARO:3002266|IND-10 [Chryseobacterium indologenes]
Lahey	Bla|IND-10|GU206353|19-738|720|betalactams|Class_B_betalactamases|IND	ADA13241.1 GU206353.1:19-738
NCBI	Bla|IND-10|GU206353|19-738|720|betalactams|Class_B_betalactamases|IND	gi|281021928|gb|GU206353.1|19-738
Resfinder	Bla|IND-10|GU206353|19-738|720|betalactams|Class_B_betalactamases|IND	blaIND-10_1_GU206353
ARG-ANNOT	Bla|LEN-9|AJ635423|1-789|789|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-9:AJ635423:1-789:789
CARD	Bla|LEN-9|AJ635423|1-789|789|betalactams|Class_A_betalactamases|LEN	@phgb|AJ635423|0-789|ARO:3002459|LEN-9 [Klebsiella pneumoniae]
NCBI	Bla|LEN-9|AJ635423|1-789|789|betalactams|Class_A_betalactamases|LEN	gi|46309221|emb|AJ635423.1|1-789
NCBI	Flq|NC_003197.1.1253794|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|981191958|emb|LN999997.1|3006363-3008999 gi|973795115|gb|AE006468.2|2376346-2373710 gi|821161554|gb|CP011428.1|2444280-2441644 gi|808186398|gb|CP007523.1|3108514-3105878 gi|777177758|emb|LN829401.1|509442-512078 gi|764057510|gb|CP007235.1|3148307-3145671 gi|669110799|gb|CP007804.2|2318514-2315878 gi|661245796|dbj|AP014565.1|2542881-2540245 gi|618631222|gb|CP007581.1|2443861-2441225 gi|548933035|emb|HG326213.1|2366948-2364312
ARG-ANNOT	Bla|OXA-175|HM113561|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-175:HM113561:1-825:825
CARD	Bla|OXA-175|HM113561|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HM113561|0-825|ARO:3001659|OXA-175 [Acinetobacter baumannii]
Lahey	Bla|OXA-175|HM113561|1-825|825|betalactams|Class_D_betalactamases|OXA	ADI58619.1 HM113561.1:1-825
NCBI	Bla|OXA-175|HM113561|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|298113025|gb|HM113561.1|1-825
Resfinder	Bla|OXA-175|HM113561|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-175_1_HM113561
CARD	Mdr|NC_002516.2.880212|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXE	@phgb|NC_002516|2808742-2809987|ARO:3000803|mexE [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.880212|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXE	gi|984361056|gb|CP008873.1|5357339-5358583 gi|984355403|gb|CP008872.1|2984050-2982806 gi|982189197|gb|CP013993.1|3081834-3080590 gi|975043142|gb|CP013989.1|2766798-2765554 gi|974359204|gb|CP008871.1|3085327-3086571 gi|974335511|gb|CP008867.1|5205296-5204052 gi|974327848|gb|CP008866.1|660056-661300 gi|974319461|gb|CP008865.1|5714974-5713730 gi|974275390|gb|CP008860.1|3998892-3997648 gi|970332569|gb|CP013696.1|4361264-4360020
NCBI	gi|14700043|gb|AY039040.1|betalactams|Class_A_betalactamases|TEM	gi|14700043|gb|AY039040.1|1-1022
ARG-ANNOT	Bla|OXA-130|EU547445|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-130:EU547445:1-825:825
CARD	Bla|OXA-130|EU547445|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|EU547445|0-825|ARO:3001651|OXA-130 [Acinetobacter baumannii]
Lahey	Bla|OXA-130|EU547445|1-825|825|betalactams|Class_D_betalactamases|OXA	ACD84988.1 EU547445.1:1-825
NCBI	Bla|OXA-130|EU547445|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|189214263|gb|EU547445.1|1-825
Resfinder	Bla|OXA-130|EU547445|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-130_1_EU547445
ARG-ANNOT	Bla|LEN-6|AY265890|1-472|472|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-6:AY265890:1-472:472
CARD	Bla|LEN-6|AY265890|1-472|472|betalactams|Class_A_betalactamases|LEN	@phgb|AY265890|0-472|ARO:3002476|LEN-6 [Klebsiella pneumoniae]
NCBI	Bla|LEN-6|AY265890|1-472|472|betalactams|Class_A_betalactamases|LEN	gi|46244167|gb|AY265890.1|1-472 gi|288887617|gb|CP001891.1|2842019-2842486 gi|197724696|emb|AM850912.2|23-490 gi|46309209|emb|AJ635417.1|1-454 gi|46309181|emb|AJ635403.1|1-454
CARD	CARD|pvgb|NC_007622|559336-560521|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|NC_007622|559336-560521|ARO:3001312|elfamycin resistant EF-Tu [Staphylococcus aureus RF122]
NCBI	CARD|pvgb|NC_007622|559336-560521|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|82655308|emb|AJ938182.1|559337-560522
ARG-ANNOT	Bla|OXA-146|FJ194460|174-998|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-146:FJ194460:174-998:825
CARD	Bla|OXA-146|FJ194460|174-998|825|betalactams|Class_D_betalactamases|OXA	@phgb|FJ194494|171-996|ARO:3001779|OXA-146 [Acinetobacter baumannii]
Lahey	Bla|OXA-146|FJ194460|174-998|825|betalactams|Class_D_betalactamases|OXA	ACI28281.1 FJ194494.1:172-996
NCBI	Bla|OXA-146|FJ194460|174-998|825|betalactams|Class_D_betalactamases|OXA	gi|817490716|gb|KP264122.1|89-913 gi|208431881|gb|FJ194494.1|172-996 gi|206967371|gb|FJ194460.1|174-998
Resfinder	Bla|OXA-146|FJ194460|174-998|825|betalactams|Class_D_betalactamases|OXA	blaOXA-146_1_FJ194460
ARG-ANNOT	Bla|MOX-2|AJ276453|4620-5768|1149|betalactams|Class_C_betalactamases|MOX	(Bla)MOX-2:AJ276453:4620-5768:1149
CARD	Bla|MOX-2|AJ276453|4620-5768|1149|betalactams|Class_C_betalactamases|MOX	@phgb|AJ276453|4619-5768|ARO:3002183|MOX-2 [Klebsiella pneumoniae]
Lahey	Bla|MOX-2|AJ276453|4620-5768|1149|betalactams|Class_C_betalactamases|MOX	CAB82578.1 AJ276453.1:4620-5768
NCBI	Bla|MOX-2|AJ276453|4620-5768|1149|betalactams|Class_C_betalactamases|MOX	gi|7328114|emb|AJ276453.1|4620-5768
Resfinder	Bla|MOX-2|AJ276453|4620-5768|1149|betalactams|Class_C_betalactamases|MOX	blaMOX-2_1_AJ276453
NCBI	gi|14626419|gb|AY034847.1|betalactams|Class_A_betalactamases|KPC	gi|873464424|gb|KR014106.1|9895-10812 gi|962148899|gb|KU176944.1|36848-37765 gi|961666360|gb|KT185451.1|86335-85418 gi|966624506|gb|CP012000.1|12165-13082 gi|966624404|gb|CP011999.1|28777-27860 gi|959190550|gb|CP013325.1|38362-37445 gi|941349957|gb|KP726894.1|3977-3060 gi|918463219|gb|KP987218.1|19745-18828 gi|918462945|gb|KP987215.1|6227-7144 gi|817046807|gb|KP893385.1|125827-124910
CARD	MLS|ermE_1_X51891|MLS|23S_rRNA_methyltransferases|ERME	@phgb|X51891|189-1335|ARO:3000326|ErmE [Saccharopolyspora erythraea NRRL 2338]
NCBI	MLS|ermE_1_X51891|MLS|23S_rRNA_methyltransferases|ERME	gi|133909243|emb|AM420293.1|831538-830393 gi|46972|emb|X51891.1|190-1335
Resfinder	MLS|ermE_1_X51891|MLS|23S_rRNA_methyltransferases|ERME	erm(E)_1_X51891
NCBI	gi|56554768|gb|AY847146.1|betalactams|Class_A_betalactamases|CTX	gi|56554768|gb|AY847146.1|83-963
ARG-ANNOT	gi|298113029|gb|HM113563.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-177:HM113563:1-825:825
CARD	gi|298113029|gb|HM113563.1|betalactams|Class_D_betalactamases|OXA	@phgb|HM113563|0-825|ARO:3001661|OXA-177 [Acinetobacter baumannii]
Lahey	gi|298113029|gb|HM113563.1|betalactams|Class_D_betalactamases|OXA	ADI58621.1 HM113563.1:1-825
NCBI	gi|298113029|gb|HM113563.1|betalactams|Class_D_betalactamases|OXA	gi|298113029|gb|HM113563.1|1-825
Resfinder	gi|298113029|gb|HM113563.1|betalactams|Class_D_betalactamases|OXA	blaOXA-177_1_HM113563
ARG-ANNOT	Bla|OKP-A-1|AJ635401|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-1:AJ635401:1-861:861
CARD	Bla|OKP-A-1|AJ635401|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AJ635401|0-861|ARO:3002418|OKP-A-1 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-1|AJ635401|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|71609064|emb|AJ635401.2|1-861
Resfinder	Bla|OKP-A-1|AJ635401|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-1_1_AM051138
NCBI	Bla|OXA-2_1_GQ466184|betalactams|Class_D_betalactamases|OXA	gi|260060383|gb|GQ466184.1|2534-3361
Resfinder	Bla|OXA-2_1_GQ466184|betalactams|Class_D_betalactamases|OXA	blaOXA-2_1_GQ466184
ARG-ANNOT	Bla|OxA-116|EU220744|1-786|786|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-116:EU220744:1-786:786
CARD	Bla|OxA-116|EU220744|1-786|786|betalactams|Class_D_betalactamases|OXA	@phgb|EU220744|0-786|ARO:3001441|OXA-116 [Acinetobacter baumannii]
NCBI	Bla|OxA-116|EU220744|1-786|786|betalactams|Class_D_betalactamases|OXA	gi|159159998|gb|EU220744.1|1-786
Resfinder	Bla|OxA-116|EU220744|1-786|786|betalactams|Class_D_betalactamases|OXA	blaOXA-116_1_EU220744
NCBI	gi|591389171|gb|KJ135346.1|betalactams|Class_D_betalactamases|OXA	gi|591389171|gb|KJ135346.1|1-901
ARG-ANNOT	Bla|TEM-12|M88143|368-1228|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-12:M88143:368-1228:861
CARD	Bla|TEM-12|M88143|368-1228|861|betalactams|Class_A_betalactamases|TEM	@phgb|M88143|367-1228|ARO:3000884|TEM-12 [Klebsiella oxytoca]
Lahey	Bla|TEM-12|M88143|368-1228|861|betalactams|Class_A_betalactamases|TEM	AAA25053.1 M88143.1:368-1228
NCBI	Bla|TEM-12|M88143|368-1228|861|betalactams|Class_A_betalactamases|TEM	gi|873464057|gb|KR259131.1|1813-2673 gi|149167|gb|M88143.1|KPNBETALAC|368-1228
Resfinder	Bla|TEM-12|M88143|368-1228|861|betalactams|Class_A_betalactamases|TEM	blaTEM-12_1_M88143
CARD	Bla|OXA-335_1_KF203109|betalactams|Class_D_betalactamases|OXA	@phgb|KF203109|0-822|ARO:3001523|OXA-335 [Acinetobacter lwoffii]
Lahey	Bla|OXA-335_1_KF203109|betalactams|Class_D_betalactamases|OXA	AGW16417.1 KF203109.1:1-822
NCBI	Bla|OXA-335_1_KF203109|betalactams|Class_D_betalactamases|OXA	gi|544207417|gb|KF203109.1|1-822
Resfinder	Bla|OXA-335_1_KF203109|betalactams|Class_D_betalactamases|OXA	blaOXA-335_1_KF203109
ARG-ANNOT	Bla|IMI-2|JN412066|2891-3769|879|betalactams|Class_A_betalactamases|IMI	(Bla)IMI-2:JN412066:2891-3769:879
CARD	Bla|IMI-2|JN412066|2891-3769|879|betalactams|Class_A_betalactamases|IMI	@phgb|DQ173429|0-879|ARO:3001859|IMI-2 [Enterobacter asburiae]
Lahey	Bla|IMI-2|JN412066|2891-3769|879|betalactams|Class_A_betalactamases|IMI	ABA00479.1 DQ173429.1:1-879
NCBI	Bla|IMI-2|JN412066|2891-3769|879|betalactams|Class_A_betalactamases|IMI	gi|358424796|gb|JN412066.1|2891-3769 gi|74229921|gb|DQ173429.1|1-879 gi|695211104|ref|NG_036022.1|7813-8691 gi|674781129|gb|KJ855981.1|1-589
Resfinder	Bla|IMI-2|JN412066|2891-3769|879|betalactams|Class_A_betalactamases|IMI	blaIMI-2_1_DQ173429
NCBI	gi|595583477|gb|KF992026.1|betalactams|Class_C_betalactamases|ACT	gi|595583477|gb|KF992026.1|652-1898
NCBI	Bla|AY248038.1|gene4|betalactams|Class_A_betalactamases|CARB	gi|42567123|gb|AY248038.1|2012-2939
ARG-ANNOT	Bla|CTX-M-11|AY005110|254-1402|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-11:AY005110:254-1402:876
CARD	Bla|CTX-M-11|AY005110|254-1402|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY005110|0-846|ARO:3001874|CTX-M-11 [Klebsiella pneumoniae]
NCBI	Bla|CTX-M-11|AY005110|254-1402|876|betalactams|Class_A_betalactamases|CTX	gi|9739247|gb|AY005110.1|1-846
ARG-ANNOT	1329|EF653400.1|EF653400|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-113:EF653400:435-1259:825
CARD	1329|EF653400.1|EF653400|betalactams|Class_D_betalactamases|OXA	@phgb|EF653400|434-1259|ARO:3001644|OXA-113 [Acinetobacter baumannii]
Lahey	1329|EF653400.1|EF653400|betalactams|Class_D_betalactamases|OXA	ABW70410.1 EF653400.1:435-1259
NCBI	1329|EF653400.1|EF653400|betalactams|Class_D_betalactamases|OXA	gi|158518997|gb|EF653400.1|435-1259
Resfinder	1329|EF653400.1|EF653400|betalactams|Class_D_betalactamases|OXA	blaOXA-113_1_EF653400
ARG-ANNOT	Bla|OxY4-1|AY077481|125-1057|934|betalactams|Class_A_betalactamases|OXY	(Bla)OXY4-1:AY077481:125-1058:934
CARD	Bla|OxY4-1|AY077481|125-1057|934|betalactams|Class_A_betalactamases|OXY	@phgb|AY077481|185-1058|ARO:3002410|OXY-4-1 [Klebsiella oxytoca]
NCBI	Bla|OxY4-1|AY077481|125-1057|934|betalactams|Class_A_betalactamases|OXY	gi|23264039|gb|AY077481.1|186-1058
Resfinder	Bla|OxY4-1|AY077481|125-1057|934|betalactams|Class_A_betalactamases|OXY	blaOXY-4-1_1_AY077481
CARD	gi|304650979|gb|HQ122933.1|betalactams|Class_D_betalactamases|OXA	@phgb|HQ122933|0-822|ARO:3001695|OXA-134 [Acinetobacter lwoffii]
Lahey	gi|304650979|gb|HQ122933.1|betalactams|Class_D_betalactamases|OXA	ADM47435.1 HQ122933.1:1-822
NCBI	gi|304650979|gb|HQ122933.1|betalactams|Class_D_betalactamases|OXA	gi|304650979|gb|HQ122933.1|1-822 gi|358002241|gb|JN203134.1|1-274
Resfinder	gi|304650979|gb|HQ122933.1|betalactams|Class_D_betalactamases|OXA	blaOXA-134_1_HQ122933
ARG-ANNOT	1271|AF167990.3|AF167990|betalactams|Class_C_betalactamases|MOX	(Bla)CMY-8:AF167990:613-1761:1149
CARD	1271|AF167990.3|AF167990|betalactams|Class_C_betalactamases|MOX	@phgb|AF167990|612-1761|ARO:3002019|CMY-8 [Klebsiella pneumoniae]
Lahey	1271|AF167990.3|AF167990|betalactams|Class_C_betalactamases|MOX	AAD50818.2 AF167990.3:613-1761
NCBI	1271|AF167990.3|AF167990|betalactams|Class_C_betalactamases|MOX	gi|573013567|dbj|AP013064.1|30097-31245 gi|146150962|gb|EF382672.1|102633-103781 gi|58430781|dbj|AB201268.1|1-1149 gi|695199441|ref|NG_035225.1|613-1761
Resfinder	1271|AF167990.3|AF167990|betalactams|Class_C_betalactamases|MOX	blaCMY-8_1_EF382672
CARD	CARD|phgb|U00096|2155262-2158385|ARO:3000793|mdtB|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTB	@phgb|U00096|2155262-2158385|ARO:3000793|mdtB [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|2155262-2158385|ARO:3000793|mdtB|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTB	gi|985000614|gb|CP014225.1|352462-355585 gi|958627747|gb|CP013253.1|1261007-1257884 gi|939732440|gb|CP011343.2|2135420-2138543 gi|939731527|gb|CP011342.2|2136116-2139239 gi|937526251|gb|CP012870.1|2486391-2483268 gi|937521852|gb|CP012869.1|2486391-2483268 gi|937517453|gb|CP012868.1|2486391-2483268 gi|932857508|emb|LN877770.1|2519297-2522420 gi|923416119|gb|CP011113.1|2118125-2121248 gi|899729770|gb|CP012127.1|2136454-2139577
ARG-ANNOT	gi|40888715|gb|AY494717.1|betalactams|Class_A_betalactamases|GES	(Bla)GES-3:AY494717:1-864:864
CARD	gi|40888715|gb|AY494717.1|betalactams|Class_A_betalactamases|GES	@phgb|AY494717|0-864|ARO:3002334|GES-5 [Escherichia coli]
Lahey	gi|40888715|gb|AY494717.1|betalactams|Class_A_betalactamases|GES	AAR97270.1 AY494717.1:1-864
NCBI	gi|40888715|gb|AY494717.1|betalactams|Class_A_betalactamases|GES	gi|695210445|ref|NG_035941.1|1-864
CARD	CARD|phgb|CP004067|43007-43928|ARO:3002669|APH2-DPRIME-Ig|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	@phgb|CP004067|43007-43928|ARO:3002669|APH(2'')-Ig [Campylobacter coli CVM N29710]
NCBI	CARD|phgb|CP004067|43007-43928|ARO:3002669|APH2-DPRIME-Ig|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	gi|540366916|gb|CP004067.1|43008-43929
NCBI	Flq|CP000675.2|gene1514|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|295647398|gb|CP001828.1|1627815-1630406 gi|225791049|gb|CP000675.2|1629288-1631879
CARD	CARD|phgb|X80277|0-1149|ARO:3003553|CepS|betalactams|Class_C_betalactamases|CEPS	@phgb|X80277|0-1149|ARO:3003553|CepS beta-lactamase [Aeromonas sobria]
NCBI	CARD|phgb|X80277|0-1149|ARO:3003553|CepS|betalactams|Class_C_betalactamases|CEPS	gi|117558854|gb|CP000462.1|3546918-3545770 gi|1072326|emb|X80277.1|1-1149
Lahey	gi|15149329|gb|AF397068.1|betalactams|Class_A_betalactamases|TEM	AAK85245.1 AF397068.1:1-861
NCBI	gi|15149329|gb|AF397068.1|betalactams|Class_A_betalactamases|TEM	gi|15149329|gb|AF397068.1|AF397068|1-861
Resfinder	gi|15149329|gb|AF397068.1|betalactams|Class_A_betalactamases|TEM	blaTEM-98_1_AF397068
ARG-ANNOT	825|S52438.1|S52438|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	(Tet)TetR(G):S52438:113-745:633
NCBI	825|S52438.1|S52438|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|695196873|ref|NG_034553.1|113-745
ARG-ANNOT	MLS|LmrB|X62867|361-1197|837|MLS|Lincosamide_efflux_pump|LMRB	(MLS)LmrB:X62867:361-1197:837
CARD	MLS|LmrB|X62867|361-1197|837|MLS|Lincosamide_efflux_pump|LMRB	@phgb|X62867|360-1197|ARO:3001305|ErmU [Streptomyces lincolnensis]
NCBI	MLS|LmrB|X62867|361-1197|837|MLS|Lincosamide_efflux_pump|LMRB	gi|47175|emb|X62867.1|361-1197
Resfinder	MLS|LmrB|X62867|361-1197|837|MLS|Lincosamide_efflux_pump|LMRB	lmr(B)_1_X62867
CARD	Mdr|NC_011586.7046391|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEA	@phgb|NC_011595|1828888-1830079|ARO:3000774|adeA [Acinetobacter baumannii AB307-0294]
NCBI	Mdr|NC_011586.7046391|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEA	gi|939559781|gb|CP012952.1|1976801-1977991 gi|787858845|gb|CP008706.1|1975742-1976932 gi|751410783|gb|CP010781.1|2025025-2023835 gi|213985689|gb|CP001172.1|1828889-1830079 gi|213054530|gb|CP001182.1|2163552-2162362 gi|169147133|emb|CU459141.1|1885334-1886524 gi|88758845|emb|CT025811.2|10-1200
ARG-ANNOT	Bla|CMY-18|AY743434|47-1198|1152|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-18:AY743434:47-1198:1152
CARD	Bla|CMY-18|AY743434|47-1198|1152|betalactams|Class_C_betalactamases|CMY	@phgb|AY743434|46-1198|ARO:3002029|CMY-18 [Escherichia coli]
Lahey	Bla|CMY-18|AY743434|47-1198|1152|betalactams|Class_C_betalactamases|CMY	AAU95778.1 AY743434.1:47-1198
NCBI	Bla|CMY-18|AY743434|47-1198|1152|betalactams|Class_C_betalactamases|CMY	gi|53854915|gb|AY743434.1|47-1198
Resfinder	Bla|CMY-18|AY743434|47-1198|1152|betalactams|Class_C_betalactamases|CMY	blaCMY-18_1_AY743434
NCBI	AGly|strA_5_AF321550|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|695208275|ref|NG_035510.1|1-804
Resfinder	AGly|strA_5_AF321550|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	strA_5_AF321550
CARD	CARD|phgb|AF079138|153-1122|ARO:3000598|Erm31|MLS|23S_rRNA_methyltransferases|ERM	@phgb|AF079138|153-1122|ARO:3000598|Erm(31) [Streptomyces venezuelae]
NCBI	CARD|phgb|AF079138|153-1122|ARO:3000598|Erm31|MLS|23S_rRNA_methyltransferases|ERM	gi|3808326|gb|AF079138.1|AF079138|154-1123
NCBI	Sul|sul1_33_AJ564903|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|765526698|gb|KF743818.1|15871-15032 gi|478439656|gb|CP003376.1|17497-16658 gi|409723607|gb|CP003505.2|15871-15032 gi|89211889|gb|DQ352176.1|2394-1555 gi|31746361|emb|AJ564903.1|15871-15032
Resfinder	Sul|sul1_33_AJ564903|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_33_AJ564903
CARD	Elf|CP000647.1|gene4394|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP000647|4764664-4765849|ARO:3001312|elfamycin resistant EF-Tu [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
NCBI	Elf|CP000647.1|gene4394|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|719628246|gb|CP009461.1|4638033-4636849 gi|150953431|gb|CP000647.1|4764665-4765849
NCBI	Gly|VanR-D_2_AF175293|Glycopeptides|VanD-type_regulator|VANRD	gi|5759260|gb|AF175293.1|AF175293|71-769
Resfinder	Gly|VanR-D_2_AF175293|Glycopeptides|VanD-type_regulator|VANRD	VanR-D_2_AF175293
NCBI	Elf|HE999704.1|gene2984|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|973722074|gb|CP013919.1|214702-215889 gi|970876009|gb|CP013724.1|1287845-1286658 gi|970873114|gb|CP013723.1|2044772-2043585 gi|970870287|gb|CP013722.1|1743049-1744236 gi|827394152|gb|CP007689.1|2684662-2683475 gi|827391257|gb|CP007688.1|2734510-2733323 gi|827388439|gb|CP007687.1|2683194-2682007 gi|827382749|gb|CP007685.1|2734326-2733139 gi|827379923|gb|CP007684.1|2694596-2693409 gi|820767303|gb|CP011397.1|2704076-2702889
CARD	CARD|phgb|FJ872411|43513-44203|ARO:3002924|vanRE|Glycopeptides|VanE-type_regulator|VANRE	@phgb|FJ872411|43513-44203|ARO:3002924|vanRE [Enterococcus faecalis]
NCBI	CARD|phgb|FJ872411|43513-44203|ARO:3002924|vanRE|Glycopeptides|VanE-type_regulator|VANRE	gi|229892433|gb|FJ872411.1|43514-44204 gi|521377829|gb|CP005485.1|1727401-1727373 gi|521374308|gb|CP005484.1|1633166-1633138 gi|355393429|gb|CP003094.1|1650918-1650890
NCBI	gi|12484390|gb|AF252623.2|betalactams|Class_A_betalactamases|CTX	gi|695200145|ref|NG_035388.1|1-878
ARG-ANNOT	gi|160948432|emb|AM176546.2|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-71:AM176546:1-861:861
CARD	gi|160948432|emb|AM176546.2|betalactams|Class_A_betalactamases|SHV	@phgb|AM176546|0-861|ARO:3001125|SHV-71 [Klebsiella pneumoniae]
Lahey	gi|160948432|emb|AM176546.2|betalactams|Class_A_betalactamases|SHV	CAJ47126.2 AM176546.2:1-861
NCBI	gi|160948432|emb|AM176546.2|betalactams|Class_A_betalactamases|SHV	gi|160948432|emb|AM176546.2|1-861
NCBI	MLS|L22689.1|gene1|MLS|23S_rRNA_methyltransferases|ERMQ	gi|457207|gb|L22689.1|CLOERMQ|249-1035
CARD	gi|544207415|gb|KF203108.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF203108|0-825|ARO:3001522|OXA-334 [Acinetobacter johnsonii]
Lahey	gi|544207415|gb|KF203108.1|betalactams|Class_D_betalactamases|OXA	AGW16416.1 KF203108.1:1-825
NCBI	gi|544207415|gb|KF203108.1|betalactams|Class_D_betalactamases|OXA	gi|544207415|gb|KF203108.1|1-825
Resfinder	gi|544207415|gb|KF203108.1|betalactams|Class_D_betalactamases|OXA	blaOXA-334_1_KF203108
ARG-ANNOT	Bla|HERA-2|AF398334|1-873|873|betalactams|Class_A_betalactamases|HERA	(Bla)HERA-2:AF398334:1-873:873
NCBI	Bla|HERA-2|AF398334|1-873|873|betalactams|Class_A_betalactamases|HERA	gi|16589039|gb|AF398334.1|1-873
Resfinder	Bla|HERA-2|AF398334|1-873|873|betalactams|Class_A_betalactamases|HERA	blaHERA-2_1_AF398334
ARG-ANNOT	AGly|Aac6-Aph2|M13771|304-1743|1440|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Aph2:M13771:304-1743:1440
CARD	AGly|Aac6-Aph2|M13771|304-1743|1440|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|NC_005024|42504-43944|ARO:3002597|AAC(6')-Ie-APH(2'')-Ia [Staphylococcus aureus]
NCBI	AGly|Aac6-Aph2|M13771|304-1743|1440|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|974700633|dbj|AP017321.1|1566-3005 gi|937637449|gb|KT601170.1|53744-52305 gi|908234448|gb|CP010309.1|342355-340916 gi|841330217|emb|LN866849.1|1591032-1592471 gi|822490352|gb|CP003939.1|1724076-1722637 gi|807232188|gb|CP011116.1|1632281-1630842 gi|756766642|gb|KJ922127.1|19639-18200 gi|748807120|gb|CP010526.1|59777-61216 gi|675304693|gb|CP007500.1|19565-18126 gi|544068837|gb|KF652094.1|1-1440
Resfinder	AGly|Aac6-Aph2|M13771|304-1743|1440|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-aph(2'')_1_M13771
ARG-ANNOT	Bla|GES-22|JX023441|38-901|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-22:JX023441:38-901:864
CARD	Bla|GES-22|JX023441|38-901|864|betalactams|Class_A_betalactamases|GES	@phgb|JX023441|37-901|ARO:3002351|GES-22 [Acinetobacter baumannii]
Lahey	Bla|GES-22|JX023441|38-901|864|betalactams|Class_A_betalactamases|GES	AFU25739.1 JX023441.1:38-901
NCBI	Bla|GES-22|JX023441|38-901|864|betalactams|Class_A_betalactamases|GES	gi|407731706|gb|JX023441.1|38-901
Resfinder	Bla|GES-22|JX023441|38-901|864|betalactams|Class_A_betalactamases|GES	blaGES-22_1_JX023441
ARG-ANNOT	1234|AY139598.1|AY139598|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-119:AY139598:1422-2222:801
CARD	1234|AY139598.1|AY139598|betalactams|Class_D_betalactamases|OXA	@phgb|AY139598|1486-2287|ARO:3001775|OXA-119 [uncultured bacterium]
Lahey	1234|AY139598.1|AY139598|betalactams|Class_D_betalactamases|OXA	AAN41427.1 AY139598.1:1487-2287
NCBI	1234|AY139598.1|AY139598|betalactams|Class_D_betalactamases|OXA	gi|24209721|gb|AY139598.1|1487-2287
Resfinder	1234|AY139598.1|AY139598|betalactams|Class_D_betalactamases|OXA	blaOXA-119_1_AY139598
CARD	Flq|NC_002952.2859949|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	@pvgb|NC_002952|7004-9665|ARO:3003296|Staphylococcus aureus gyrA conferring resistance to fluoroquinolones [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	Flq|NC_002952.2859949|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|974161314|gb|CP012018.1|6988-9648 gi|974158397|gb|CP012015.1|6988-9648 gi|974155539|gb|CP012013.1|6989-9649 gi|974152716|gb|CP012012.1|7005-9665 gi|974149849|gb|CP012011.1|7005-9665 gi|700315490|gb|CP009681.1|7004-9664 gi|520996365|gb|CP005288.1|7004-9664 gi|302749911|gb|CP002120.1|6489-9149 gi|269939526|emb|FN433596.1|7005-9665 gi|49240382|emb|BX571856.1|7005-9665
ARG-ANNOT	Bla|LEN-4|AY130287|1-823|823|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-4:AY130287:1-823:823
CARD	Bla|LEN-4|AY130287|1-823|823|betalactams|Class_A_betalactamases|LEN	@phgb|AY130287|0-822|ARO:3002472|LEN-4 [Klebsiella pneumoniae]
NCBI	Bla|LEN-4|AY130287|1-823|823|betalactams|Class_A_betalactamases|LEN	gi|28192519|gb|AY130287.1|1-823
ARG-ANNOT	295|AF211348.1|AF211348|betalactams|Class_C_betalactamases|CMY	(Bla)AmpC:AF211348:233-1378:1146
NCBI	295|AF211348.1|AF211348|betalactams|Class_C_betalactamases|CMY	gi|443901024|emb|FO203355.1|2839623-2840768 gi|6601478|gb|AF211348.1|AF211348|233-1378
ARG-ANNOT	gi|430804550|gb|KC149518.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-153:KC149518:1-861:861
CARD	gi|430804550|gb|KC149518.1|betalactams|Class_A_betalactamases|TEM	@phgb|KC149518|0-861|ARO:3001369|TEM-153 [Escherichia coli]
Lahey	gi|430804550|gb|KC149518.1|betalactams|Class_A_betalactamases|TEM	AGA83484.1 KC149518.1:1-861
NCBI	gi|430804550|gb|KC149518.1|betalactams|Class_A_betalactamases|TEM	gi|430804550|gb|KC149518.1|1-861
Resfinder	gi|430804550|gb|KC149518.1|betalactams|Class_A_betalactamases|TEM	blaTEM-153_1_KC149518
CARD	CARD|phgb|AF072684|117-993|ARO:3001075|SHV-16|betalactams|Class_A_betalactamases|SHV	@phgb|AF072684|117-993|ARO:3001075|SHV-16 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF072684|117-993|ARO:3001075|SHV-16|betalactams|Class_A_betalactamases|SHV	gi|15718690|gb|AF072684.2|AF072684|118-994
ARG-ANNOT	gi|161367443|gb|EU274581.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-104:EU274581:1-861:861
CARD	gi|161367443|gb|EU274581.1|betalactams|Class_A_betalactamases|SHV	@phgb|EU274581|0-861|ARO:3001153|SHV-104 [Klebsiella pneumoniae]
Lahey	gi|161367443|gb|EU274581.1|betalactams|Class_A_betalactamases|SHV	ABX71158.1 EU274581.1:1-861
NCBI	gi|161367443|gb|EU274581.1|betalactams|Class_A_betalactamases|SHV	gi|695213007|ref|NG_036535.1|1-861
Resfinder	gi|161367443|gb|EU274581.1|betalactams|Class_A_betalactamases|SHV	blaSHV-104_1_EU274581
NCBI	Flq|NC_003923.1003354|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|47118312|dbj|BA000033.2|1358315-1360717
NCBI	Bla|SHV-2_1_GQ407116|betalactams|Class_A_betalactamases|SHV	gi|257043749|gb|GQ407116.1|1-861
Resfinder	Bla|SHV-2_1_GQ407116|betalactams|Class_A_betalactamases|SHV	blaSHV-2_1_GQ407116
CARD	202|DQ195535.2|DQ195535|MLS|Macrolide_glycosyltransferases|OLEI	@phgb|DQ195535|0-1275|ARO:3000866|oleI [Streptomyces antibioticus]
NCBI	202|DQ195535.2|DQ195535|MLS|Macrolide_glycosyltransferases|OLEI	gi|98991147|gb|DQ195535.2|1-1275
ARG-ANNOT	gi|294997088|dbj|AB529520.1|betalactams|Class_B_betalactamases|IND	(Bla)IND-7:AB529520:1-720:720
CARD	gi|294997088|dbj|AB529520.1|betalactams|Class_B_betalactamases|IND	@phgb|AB529520|0-720|ARO:3002263|IND-7 [Chryseobacterium indologenes]
Lahey	gi|294997088|dbj|AB529520.1|betalactams|Class_B_betalactamases|IND	BAJ05825.1 AB529520.1:1-720
NCBI	gi|294997088|dbj|AB529520.1|betalactams|Class_B_betalactamases|IND	gi|294997088|dbj|AB529520.1|1-720
Resfinder	gi|294997088|dbj|AB529520.1|betalactams|Class_B_betalactamases|IND	blaIND-7_1_AB529520
CARD	CARD|phgb|JF802084|559-1591|ARO:3002912|vanN|Glycopeptides|VanN-type_resistance_protein|VANN	@phgb|JF802084|559-1591|ARO:3002912|vanN [Enterococcus faecium]
NCBI	CARD|phgb|JF802084|559-1591|ARO:3002912|vanN|Glycopeptides|VanN-type_resistance_protein|VANN	gi|507722025|gb|JF802084.2|560-1592 gi|425702999|dbj|AB701345.1|3409-4441
CARD	CARD|phgb|AL513383|161910-162771|ARO:3000873|TEM-1|betalactams|Class_A_betalactamases|TEM	@phgb|AL513383|161910-162771|ARO:3000873|TEM-1 [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
NCBI	CARD|phgb|AL513383|161910-162771|ARO:3000873|TEM-1|betalactams|Class_A_betalactamases|TEM	gi|817373828|gb|KP398867.1|27242-28103 gi|365803989|gb|CP003225.1|29746-30607 gi|365803989|gb|CP003225.1|49820-50681 gi|365803828|gb|CP003224.1|41723-42584 gi|284433120|gb|GU256641.1|63114-62253 gi|284433120|gb|GU256641.1|76950-76089 gi|16505740|emb|AL513383.1|161911-162772 gi|124054002|gb|EF035607.1|1-861 gi|12044259|gb|AF309824.1|AF309824|119-979
NCBI	gi|17026025|dbj|AB074436.1|betalactams|Class_B_betalactamases|IMP	gi|575771398|dbj|AB901042.1|637-1521 gi|346644638|dbj|AB625454.1|81-965 gi|17026025|dbj|AB074436.1|1-885
CARD	CARD|phgb|AJ584701|10-562|ARO:3002590|AAC6-PRIME-Iih|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AJ584701|10-562|ARO:3002590|AAC(6')-Iih [Enterococcus durans]
NCBI	CARD|phgb|AJ584701|10-562|ARO:3002590|AAC6-PRIME-Iih|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|46559084|emb|AJ584701.2|11-563
NCBI	gi|591389145|gb|KF986255.1|betalactams|Class_D_betalactamases|OXA	gi|591389145|gb|KF986255.1|1-916
ARG-ANNOT	Bla|IBC-2|AF329699|373-1236|864|betalactams|Class_A_betalactamases|GES	(Bla)IBC-2:AF329699:373-1236:864
CARD	Bla|IBC-2|AF329699|373-1236|864|betalactams|Class_A_betalactamases|GES	@phgb|AF329699|372-1236|ARO:3002337|GES-8 [Pseudomonas aeruginosa]
Lahey	Bla|IBC-2|AF329699|373-1236|864|betalactams|Class_A_betalactamases|GES	AAK18183.1 AF329699.1:373-1236
NCBI	Bla|IBC-2|AF329699|373-1236|864|betalactams|Class_A_betalactamases|GES	gi|13310176|gb|AF329699.1|373-1236
Resfinder	Bla|IBC-2|AF329699|373-1236|864|betalactams|Class_A_betalactamases|GES	blaGES-8_1_AF329699
ARG-ANNOT	Bla|NC_010410|1184557-1185747|1191|betalactams|Class_C_betalactamases|ADC	(Bla)beta-lactamase_class-C:NC_010410:1184557-1185747:1191
NCBI	Bla|NC_010410|1184557-1185747|1191|betalactams|Class_C_betalactamases|ADC	gi|169147133|emb|CU459141.1|1185747-1184557 gi|169147133|emb|CU459141.1|2396245-2396214 gi|169147133|emb|CU459141.1|212335-212364 gi|169147133|emb|CU459141.1|530288-530317 gi|169147133|emb|CU459141.1|1081691-1081720 gi|169147133|emb|CU459141.1|1212904-1212933 gi|169147133|emb|CU459141.1|1697651-1697622 gi|169147133|emb|CU459141.1|1826714-1826685 gi|169147133|emb|CU459141.1|1930515-1930544 gi|169147133|emb|CU459141.1|1932719-1932690 gi|169147133|emb|CU459141.1|2186668-2186697 gi|169147133|emb|CU459141.1|2501264-2501293 gi|169147133|emb|CU459141.1|2523368-2523397 gi|169147133|emb|CU459141.1|2673579-2673550 gi|169147133|emb|CU459141.1|2680747-2680718 gi|169147133|emb|CU459141.1|2687727-2687756 gi|169147133|emb|CU459141.1|3349281-3349310 gi|169147133|emb|CU459141.1|3351485-3351456 gi|169147133|emb|CU459141.1|3886490-3886461 gi|169147133|emb|CU459141.1|3926870-3926899 gi|169147133|emb|CU459141.1|3929074-3929045 gi|88758819|emb|CT025798.2|1-1191 gi|817554816|gb|GQ406245.5|60697-61857 gi|787858845|gb|CP008706.1|1227918-1226758 gi|787858845|gb|CP008706.1|562941-562970 gi|787858845|gb|CP008706.1|675782-675811 gi|787858845|gb|CP008706.1|2530339-2530310 gi|751410783|gb|CP010781.1|2733379-2734539 gi|672941292|gb|GQ406246.3|23148-24308 gi|602249473|gb|KC118540.6|111307-112467 gi|602249473|gb|KC118540.6|5799-5828 gi|484355510|gb|FJ172370.5|85002-86162 gi|213985689|gb|CP001172.1|1171614-1170454 gi|295855251|gb|GU591983.1|1-1152
CARD	CARD|phgb|KM401566|1211-2033|ARO:3003117|OXA-421|betalactams|Class_D_betalactamases|OXA	@phgb|KM401566|1211-2033|ARO:3003117|OXA-421 [Acinetobacter pittii]
NCBI	CARD|phgb|KM401566|1211-2033|ARO:3003117|OXA-421|betalactams|Class_D_betalactamases|OXA	gi|908841704|gb|KR153292.1|622-1444 gi|728895382|gb|KM401566.1|1212-2034
ARG-ANNOT	1009|AF031326.1|AF031326|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Ir:AF031326:1-441:441
CARD	1009|AF031326.1|AF031326|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF031326|0-441|ARO:3002561|AAC(6')-Ir [Acinetobacter genomosp. 14]
NCBI	1009|AF031326.1|AF031326|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|2909804|gb|AF031326.1|1-441
Resfinder	1009|AF031326.1|AF031326|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Ir_1_AF031326
CARD	63|DQ516954.1|DQ516954|Multi-drug_resistance|Multi-drug_efflux_pumps|MSBA	@phgb|DQ516954|0-1716|ARO:3002881|lmrC [Lactococcus lactis subsp. lactis]
NCBI	63|DQ516954.1|DQ516954|Multi-drug_resistance|Multi-drug_efflux_pumps|MSBA	gi|552063405|gb|CP006766.1|358087-359803 gi|326405597|gb|CP002365.1|296986-298702 gi|99079544|gb|DQ516945.1|1-1717
NCBI	Bla|SHV-71_2_DQ296194|betalactams|Class_A_betalactamases|SHV	gi|83596179|gb|DQ296194.1|1-861
Resfinder	Bla|SHV-71_2_DQ296194|betalactams|Class_A_betalactamases|SHV	blaSHV-71_2_DQ296194
NCBI	gi|6606273|gb|AF157553.1|betalactams|Class_A_betalactamases|TEM	gi|695199351|ref|NG_035209.1|1-1008
ARG-ANNOT	MLS|TlrC|NC_016113|803268-384890|1623|MLS|ABC_transporter|TLRC	(MLS)TlrC:NC_016113:803268-384890:1623
NCBI	MLS|TlrC|NC_016113|803268-384890|1623|MLS|ABC_transporter|TLRC	gi|365809978|gb|CP003229.1|1008211-1009833 gi|337762320|emb|FQ859184.1|804890-803268 gi|407879691|emb|HE804045.1|1165932-1165899 gi|576082433|gb|CP006850.1|7738912-7738943 gi|822875672|emb|LN831790.1|6212143-6212173 gi|822875672|emb|LN831790.1|933934-933905 gi|758855033|gb|CP010849.1|1958847-1958817 gi|758855033|gb|CP010849.1|7168277-7168306 gi|133909243|emb|AM420293.1|2378768-2378797
CARD	CARD|phgb|FJ483516.1|0-252|ARO:3000860|rmtB|Aminoglycosides|16S_rRNA_methyltransferases|RMTB	@phgb|FJ483516.1|0-252|ARO:3000860|rmtB [Pseudomonas aeruginosa]
NCBI	CARD|phgb|FJ483516.1|0-252|ARO:3000860|rmtB|Aminoglycosides|16S_rRNA_methyltransferases|RMTB	gi|219665290|gb|FJ483516.1|1-252 gi|970338578|gb|KT725789.1|76502-76740 gi|970338460|gb|KT725788.1|81762-82000 gi|962148759|gb|KT002541.1|4950-5188 gi|961666360|gb|KT185451.1|16695-16457 gi|961494526|gb|KT282968.1|32474-32712 gi|954665559|gb|KT879914.1|12029-12267 gi|873464120|gb|KR259134.1|990-1228 gi|873464075|gb|KR259132.1|2769-3007 gi|873464057|gb|KR259131.1|2853-3091
CARD	933|AB164230.1|AB164230|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AB164230|35-566|ARO:3002593|AAC(6')-Ib-SK [Streptomyces kanamyceticus]
NCBI	933|AB164230.1|AB164230|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|51981291|emb|AJ582817.3|17294-17824 gi|47827066|dbj|AB164642.1|3-533 gi|44886009|dbj|AB164230.1|36-566 gi|85813944|emb|AJ628422.2|14067-14597
CARD	gi|573006828|gb|KF900153.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF900153|0-798|ARO:3001774|OXA-370 [Enterobacter sp. 87F-2]
Lahey	gi|573006828|gb|KF900153.1|betalactams|Class_D_betalactamases|OXA	AHF71363.1 KF900153.1:1-798
NCBI	gi|573006828|gb|KF900153.1|betalactams|Class_D_betalactamases|OXA	gi|695228223|ref|NG_041758.1|5193-5990 gi|573006828|gb|KF900153.1|1-798
NCBI	gi|43935|emb|X55640.1|betalactams|Class_A_betalactamases|SHV	gi|43935|emb|X55640.1|112-980 gi|846281090|gb|KP294351.1|15259-16126 gi|846280946|gb|KP294350.1|15260-16127 gi|800908535|gb|KM406490.1|73373-74240 gi|723258375|gb|CP009883.1|264241-265108 gi|723243622|gb|CP009869.1|124337-123470 gi|678126431|gb|KJ541681.1|27825-26958 gi|662716651|gb|CP008824.1|264940-264073 gi|640855459|gb|CP007732.1|217272-216405 gi|619739382|gb|CP007558.1|217261-216394
CARD	385|AB016934.1|AB016934|Fosfomycin|Fosfomycin_phosphorylation|FOMA	@phgb|AB016934|6575-7376|ARO:3000423|FomA [Streptomyces wedmorensis]
NCBI	385|AB016934.1|AB016934|Fosfomycin|Fosfomycin_phosphorylation|FOMA	gi|3452578|dbj|AB016934.1|6576-7376
NCBI	gi|338173766|gb|HQ661363.1|betalactams|Class_A_betalactamases|SHV	gi|338173766|gb|HQ661363.1|72-1011
NCBI	gi|48527203|gb|AY628199.1|betalactams|Class_A_betalactamases|TEM	gi|48527203|gb|AY628199.1|1-1064
NCBI	Rif|NC_002745.1123305|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|984671414|emb|LT009690.1|566471-570022 gi|927048389|gb|CP010890.1|533161-536712 gi|925190036|gb|CP012593.1|586293-589844 gi|803444476|gb|CP011147.1|571338-574889 gi|595636499|gb|CP007454.1|586352-582801 gi|499139745|gb|KC707788.1|1-3552 gi|408436493|emb|HE579073.1|555708-559259 gi|408434508|emb|HE579071.1|555659-559210 gi|408432519|emb|HE579069.1|555681-559232 gi|408430526|emb|HE579067.1|555640-559191
CARD	CARD|phgb|AF441287|260-1007|ARO:3000844|TUS-1|betalactams|Class_B_betalactamases|TUS	@phgb|AF441287|260-1007|ARO:3000844|TUS-1 beta-lactamase [Myroides odoratus DSM 2801]
NCBI	CARD|phgb|AF441287|260-1007|ARO:3000844|TUS-1|betalactams|Class_B_betalactamases|TUS	gi|24637304|gb|AF441287.1|261-1008
CARD	533|Y17896.1|Y17896|betalactams|Class_B_betalactamases|FEZ	@phgb|Y17896|0-849|ARO:3000606|FEZ-1 beta-lactamase [Fluoribacter gormanii]
NCBI	533|Y17896.1|Y17896|betalactams|Class_B_betalactamases|FEZ	gi|8980429|emb|Y17896.1|1-849
CARD	CARD|pvgb|NC_002516|4767810-4769004|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|NC_002516|4767810-4769004|ARO:3001312|elfamycin resistant EF-Tu [Pseudomonas aeruginosa PAO1]
NCBI	CARD|pvgb|NC_002516|4767810-4769004|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|974347073|gb|CP008869.1|5356263-5357457 gi|974282928|gb|CP008861.1|2970217-2971411 gi|926451317|emb|LN871187.1|748025-746831 gi|553895034|gb|CP006832.1|4767806-4769000 gi|553886202|gb|CP006831.1|4768891-4770085 gi|543879514|gb|CP006705.1|4547394-4548588 gi|110227054|gb|AE004091.2|4767811-4769005
CARD	CARD|phgb|U00096|1124117-1125326|ARO:3001216|mdtH|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTH	@phgb|U00096|1124117-1125326|ARO:3001216|mdtH [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|1124117-1125326|ARO:3001216|mdtH|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTH	gi|985000614|gb|CP014225.1|3963042-3964251 gi|958627747|gb|CP013253.1|2339586-2338377 gi|939732440|gb|CP011343.2|1122415-1123624 gi|939731527|gb|CP011342.2|1122924-1124133 gi|937526251|gb|CP012870.1|3517557-3516348 gi|937521852|gb|CP012869.1|3517558-3516349 gi|937517453|gb|CP012868.1|3517547-3516338 gi|932857508|emb|LN877770.1|1505204-1506413 gi|923416119|gb|CP011113.1|1109482-1110691 gi|899729770|gb|CP012127.1|1100251-1101460
ARG-ANNOT	Bla|GES-20|JN596280|2848-3711|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-20:JN596280:2848-3711:864
CARD	Bla|GES-20|JN596280|2848-3711|864|betalactams|Class_A_betalactamases|GES	@phgb|JN596280|2847-3711|ARO:3002349|GES-20 [Escherichia coli]
Lahey	Bla|GES-20|JN596280|2848-3711|864|betalactams|Class_A_betalactamases|GES	AEZ05108.1 JN596280.1:2848-3711
NCBI	Bla|GES-20|JN596280|2848-3711|864|betalactams|Class_A_betalactamases|GES	gi|374282203|gb|JN596280.1|2848-3711
Resfinder	Bla|GES-20|JN596280|2848-3711|864|betalactams|Class_A_betalactamases|GES	blaGES-20_1_JN596280
ARG-ANNOT	1875|U37105.2|XXU37105|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA10:U37105:2807-3640:834
NCBI	1875|U37105.2|XXU37105|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|695208261|ref|NG_035506.1|2807-3640 gi|223886322|gb|FJ172373.1|598-1403 gi|887516988|gb|KR338349.1|1140-1171 gi|762041888|gb|KM589496.1|1136-1167 gi|700659443|gb|KJ440076.1|3477-3508 gi|700659383|gb|KJ440075.1|3366-3397 gi|686483910|gb|KM111258.1|87-118 gi|672605144|gb|CP009116.1|77835-77804 gi|662571016|gb|KJ716225.1|1140-1171 gi|388837265|gb|JQ837993.1|588-619
Resfinder	1875|U37105.2|XXU37105|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA10_1_U37105
NCBI	Bla|AY077483.1|gene1|betalactams|Class_A_betalactamases|OXY	gi|18844707|gb|AY077483.1|122-1055
ARG-ANNOT	Tmt|Dfr16|AF077008|115-558|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)Dfr16:AF077008:115-558:474
NCBI	Tmt|Dfr16|AF077008|115-558|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|3348001|gb|AF077008.1|AF077008|115-588
Resfinder	Tmt|Dfr16|AF077008|115-558|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA16_1_AF077008
CARD	CARD|phgb|EU408359|3791-4694|ARO:3002513|LRA-19|betalactams|Class_B_betalactamases|LRA	@phgb|EU408359|3791-4694|ARO:3002513|LRA-19 [uncultured bacterium BLR19]
NCBI	CARD|phgb|EU408359|3791-4694|ARO:3002513|LRA-19|betalactams|Class_B_betalactamases|LRA	gi|169647664|gb|EU408359.1|3792-4695
ARG-ANNOT	Bla|TEM-80|AF347054|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-80:AF347054:209-1069:861
CARD	Bla|TEM-80|AF347054|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF347054|208-1069|ARO:3000947|TEM-80 [Enterobacter cloacae]
Lahey	Bla|TEM-80|AF347054|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAM15527.1 AF347054.1:209-1069
NCBI	Bla|TEM-80|AF347054|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|20198332|gb|AF347054.1|209-1069
Resfinder	Bla|TEM-80|AF347054|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-80_1_AF347054
Resfinder	Fos|fosA_5_NZ_AEXB01000013|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_5_NZ_AEXB01000013
ARG-ANNOT	Flq|QnrB21|FJ611948|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB21:FJ611948:1-645:645
CARD	Flq|QnrB21|FJ611948|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|FJ611948|0-645|ARO:3002736|QnrB21 [Escherichia coli]
NCBI	Flq|QnrB21|FJ611948|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|222433115|gb|FJ611948.1|1-645
Resfinder	Flq|QnrB21|FJ611948|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB21_1_FJ611948
NCBI	Sul|NC_011586.7045179|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|971497891|gb|CP012901.1|4102945-4103871 gi|957647579|dbj|AP017302.1|424019-424945 gi|957647579|dbj|AP017302.1|412063-411165 gi|957647579|dbj|AP017302.1|116888-116001 gi|751410783|gb|CP010781.1|272091-273017 gi|751410783|gb|CP010781.1|293752-294650 gi|702084791|gb|JN409449.3|54428-55354 gi|702084791|gb|JN409449.3|74145-75043 gi|685193060|gb|JN968482.3|21238-22164 gi|685193060|gb|JN968482.3|42899-43797 gi|672940400|gb|HM590877.5|48637-49563 gi|672940400|gb|HM590877.5|62675-63573 gi|469481726|gb|CP004038.1|62060-61134 gi|325301733|gb|JF262166.1|247-1173 gi|297185510|gb|HM357806.1|6255-7181 gi|213054530|gb|CP001182.1|283659-284585
ARG-ANNOT	932|L06157.1|PSEAAC3IB|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3-PRIME	(AGly)Aac3-Ib:L06157:555-1085:531
CARD	932|L06157.1|PSEAAC3IB|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3-PRIME	@phgb|L06157|554-1085|ARO:3002530|AAC(3)-Ib [Pseudomonas aeruginosa]
NCBI	932|L06157.1|PSEAAC3IB|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3-PRIME	gi|429201046|gb|JX193301.1|27939-28469 gi|429201046|gb|JX193301.1|3545-3601 gi|1196734|gb|L06157.1|PSEAAC3IB|555-1085 gi|425862449|gb|JX566708.1|1797-2274 gi|425862449|gb|JX566708.1|329-386 gi|317018024|gb|GU390404.1|1741-2218 gi|317018024|gb|GU390404.1|273-330 gi|317018003|gb|GU390401.1|1761-2238 gi|317018003|gb|GU390401.1|293-350
Resfinder	932|L06157.1|PSEAAC3IB|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3-PRIME	aac(3)-Ib_1_L06157
CARD	Bla|FJ666069.1|gene1|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666069|0-1194|ARO:3002505|PDC-6 [Pseudomonas aeruginosa]
Lahey	Bla|FJ666069.1|gene1|betalactams|Class_C_betalactamases|PDC	ACQ82811.1 FJ666069.1:1-1194
NCBI	Bla|FJ666069.1|gene1|betalactams|Class_C_betalactamases|PDC	gi|229597527|gb|FJ666069.1|1-1194
ARG-ANNOT	Bla|OXY2-3|AY077488|162-1031|870|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-3:AY077488:162-1031:870
CARD	Bla|OXY2-3|AY077488|162-1031|870|betalactams|Class_A_betalactamases|OXY	@phgb|AY077488|161-1031|ARO:3002398|OXY-2-3 [Klebsiella oxytoca]
NCBI	Bla|OXY2-3|AY077488|162-1031|870|betalactams|Class_A_betalactamases|OXY	gi|32130558|gb|AY077488.2|162-1031
Resfinder	Bla|OXY2-3|AY077488|162-1031|870|betalactams|Class_A_betalactamases|OXY	blaOXY-2-3_3_AY077488
ARG-ANNOT	Bla|SHV-73|AM176548|17-874|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-73:AM176548:17-874:858
CARD	Bla|SHV-73|AM176548|17-874|858|betalactams|Class_A_betalactamases|SHV	@phgb|AM176548|16-874|ARO:3001127|SHV-73 [Klebsiella pneumoniae]
Lahey	Bla|SHV-73|AM176548|17-874|858|betalactams|Class_A_betalactamases|SHV	CAJ47128.2 AM176548.2:17-874
NCBI	Bla|SHV-73|AM176548|17-874|858|betalactams|Class_A_betalactamases|SHV	gi|160948436|emb|AM176548.2|17-874
Resfinder	Bla|SHV-73|AM176548|17-874|858|betalactams|Class_A_betalactamases|SHV	blaSHV-73_1_AM176548
ARG-ANNOT	Bla|IMP-28|HQ263342|1-741|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-28:HQ263342:1-741:741
CARD	Bla|IMP-28|HQ263342|1-741|741|betalactams|Class_B_betalactamases|IMP	@phgb|JQ407409|1168-1909|ARO:3002219|IMP-28 [Klebsiella oxytoca]
Lahey	Bla|IMP-28|HQ263342|1-741|741|betalactams|Class_B_betalactamases|IMP	AFG73659.1 JQ407409.1:1169-1909
NCBI	Bla|IMP-28|HQ263342|1-741|741|betalactams|Class_B_betalactamases|IMP	gi|383216584|gb|JQ407409.1|1169-1909 gi|315570409|gb|HQ263342.1|1-741
Resfinder	Bla|IMP-28|HQ263342|1-741|741|betalactams|Class_B_betalactamases|IMP	blaIMP-28_1_JQ407409
ARG-ANNOT	gi|343480073|gb|JF274247.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-113:JF274247:1-876:876
CARD	gi|343480073|gb|JF274247.1|betalactams|Class_A_betalactamases|CTX	@phgb|JF274247|0-876|ARO:3001973|CTX-M-113 [Shigella sp. SH284]
Lahey	gi|343480073|gb|JF274247.1|betalactams|Class_A_betalactamases|CTX	AEM44653.1 JF274247.1:1-876
NCBI	gi|343480073|gb|JF274247.1|betalactams|Class_A_betalactamases|CTX	gi|343480073|gb|JF274247.1|1-876
Resfinder	gi|343480073|gb|JF274247.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-113_1_JF274247
CARD	Tet|AM180355.1|gene636|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	@phgb|AM180355|600033-601953|ARO:3000186|tetM [Clostridium difficile 630]
NCBI	Tet|AM180355.1|gene636|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|777205624|emb|LN831031.1|520566-518647 gi|733567460|emb|LN614756.1|605329-607248 gi|343794879|gb|JF915701.1|14476-16395 gi|115249003|emb|AM180355.1|600034-601953
CARD	CARD|phgb|NC_010410|3676915-3677389|ARO:3002854|dfrA1|Trimethoprim|Dihydrofolate_reductase|DFRA	@phgb|NC_010410|3676915-3677389|ARO:3002854|dfrA1 [Acinetobacter baumannii AYE]
NCBI	CARD|phgb|NC_010410|3676915-3677389|ARO:3002854|dfrA1|Trimethoprim|Dihydrofolate_reductase|DFRA	gi|975003027|gb|CP010829.1|4113656-4114130 gi|963329722|gb|KT316807.1|575-101 gi|963329696|gb|KT316806.1|587-113 gi|960865004|gb|CP012043.1|243074-242600 gi|957647579|dbj|AP017302.1|413049-413523 gi|954171665|gb|KT151664.1|12683-12209 gi|954171562|gb|KT151663.1|12683-12209 gi|954171278|gb|KT151660.1|12683-12209 gi|953271705|gb|KT175897.1|574-100 gi|953271701|gb|KT175896.1|564-90
CARD	gi|698174199|gb|KM087854.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087854|0-1140|ARO:3002145|DHA-14 [Morganella morganii]
Lahey	gi|698174199|gb|KM087854.1|betalactams|Class_C_betalactamases|DHA	AIT76107.1 KM087854.1:1-1140
NCBI	gi|698174199|gb|KM087854.1|betalactams|Class_C_betalactamases|DHA	gi|698174199|gb|KM087854.1|1-1140
ARG-ANNOT	CARD|phgb|KC544262|665-1424|ARO:3003198|rmtH|Aminoglycosides|16S_rRNA_methyltransferases|RMTH	(AGly)RmtH:KC544262:666-1424:759
CARD	CARD|phgb|KC544262|665-1424|ARO:3003198|rmtH|Aminoglycosides|16S_rRNA_methyltransferases|RMTH	@phgb|KC544262|665-1424|ARO:3003198|rmtH [Klebsiella pneumoniae]
NCBI	CARD|phgb|KC544262|665-1424|ARO:3003198|rmtH|Aminoglycosides|16S_rRNA_methyltransferases|RMTH	gi|461692403|gb|KC544262.1|666-1424
Resfinder	CARD|phgb|KC544262|665-1424|ARO:3003198|rmtH|Aminoglycosides|16S_rRNA_methyltransferases|RMTH	rmtH_1_KC544262
CARD	Bla|AJ746225.1|gene1|betalactams|Class_A_betalactamases|TEM	@phgb|AJ746225|0-861|ARO:3000993|TEM-129 [Klebsiella oxytoca]
Lahey	Bla|AJ746225.1|gene1|betalactams|Class_A_betalactamases|TEM	CAG34105.1 AJ746225.1:1-861
NCBI	Bla|AJ746225.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|48473852|emb|AJ746225.1|1-861
NCBI	Bla|SHV-11_15_DQ219473|betalactams|Class_A_betalactamases|SHV	gi|743569396|gb|CP006722.1|2875596-2876456 gi|77702545|gb|DQ219473.1|1-861
Resfinder	Bla|SHV-11_15_DQ219473|betalactams|Class_A_betalactamases|SHV	blaSHV-11_15_DQ219473
ARG-ANNOT	Bla|CTX-M-47|AY847143|83-958|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-47:AY847143:83-958:876
CARD	Bla|CTX-M-47|AY847143|83-958|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY847143|82-958|ARO:3001909|CTX-M-47 [Escherichia coli]
Lahey	Bla|CTX-M-47|AY847143|83-958|876|betalactams|Class_A_betalactamases|CTX	AAV97952.1 AY847143.1:83-958
NCBI	Bla|CTX-M-47|AY847143|83-958|876|betalactams|Class_A_betalactamases|CTX	gi|56554762|gb|AY847143.1|83-958
Resfinder	Bla|CTX-M-47|AY847143|83-958|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-47_1_AY847143
NCBI	Sul|sul3_5_AB281182|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|117580241|dbj|AB281183.1|28-879 gi|117580238|dbj|AB281182.1|835-1686 gi|761589803|dbj|AP014651.1|324887-324361 gi|761589803|dbj|AP014651.1|5294188-5294714 gi|672940377|gb|AY963803.6|23638-24164 gi|666688170|gb|KJ463833.1|24848-25374
Resfinder	Sul|sul3_5_AB281182|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul3_6_AB281183
CARD	199|AY566250.1|AY566250|Fluoroquinolones|Quinolone_active_efflux|NORA	@phgb|AY566250|391-1555|ARO:3000391|norA [Staphylococcus epidermidis]
NCBI	199|AY566250.1|AY566250|Fluoroquinolones|Quinolone_active_efflux|NORA	gi|760489133|gb|CP010942.1|341848-343011 gi|691218329|gb|CP009046.1|1862550-1863713 gi|672710284|emb|HG813242.1|402342-403505 gi|45593453|gb|AY566250.1|392-1555 gi|57636010|gb|CP000029.1|352474-353637 gi|41223432|emb|AJ621598.1|568-1731 gi|27316888|gb|AE015929.1|459355-460518 gi|9623976|gb|AF270071.1|AF270071|204-1
ARG-ANNOT	Bla|OXY2-5|AY077487.2|180-1049|870|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-5:AY077487.2|:180-1049:870
NCBI	Bla|OXY2-5|AY077487.2|180-1049|870|betalactams|Class_A_betalactamases|OXY	gi|828945832|gb|CP011618.1|2017078-2017947 gi|828927642|gb|CP011597.1|1998178-1999047 gi|32130556|gb|AY077487.2|180-1049 gi|1513031|dbj|D84548.1|105-974
Resfinder	Bla|OXY2-5|AY077487.2|180-1049|870|betalactams|Class_A_betalactamases|OXY	blaOXY-2-5_5_AY077487
Lahey	gi|698174159|gb|KM087834.1|betalactams|Class_C_betalactamases|ACT	AIT76087.1 KM087834.1:1-1146
NCBI	gi|698174159|gb|KM087834.1|betalactams|Class_C_betalactamases|ACT	gi|698174159|gb|KM087834.1|1-1146
ARG-ANNOT	458|AF310956.2|AF310956|Glycopeptides|VanB-type_resistance_protein|VANXB	(Gly)VanX-B:AY655721:5891-6499:609
NCBI	458|AF310956.2|AF310956|Glycopeptides|VanB-type_resistance_protein|VANXB	gi|577698901|gb|KF823969.1|6145-6753 gi|577698893|gb|KF823968.1|6136-6744 gi|452996204|gb|KC489786.1|3817-4425 gi|529202214|gb|CP006620.1|775952-776560 gi|378937014|gb|CP003351.1|2839371-2838763 gi|229463101|gb|FJ767776.1|6136-6744 gi|80973263|gb|AY655721.2|5891-6499 gi|80973252|gb|AY655720.2|5891-6499 gi|80973242|gb|AY655718.2|5891-6499 gi|11878534|gb|AF310956.2|AF310956|6293-6901
NCBI	Sul|sul2_14_AJ514834|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|695209907|ref|NG_035903.1|915-1733 gi|975007785|gb|CP010832.1|4504-3697 gi|954666075|gb|KT962845.1|19587-18780 gi|971494279|gb|CP010355.1|2154-2961 gi|971339514|gb|CP006662.2|54921-54114 gi|943457735|gb|KT818627.1|110623-109816 gi|969995276|gb|KT317085.1|2977-2170 gi|969868918|gb|CP013690.1|3395295-3396102 gi|959153704|gb|CP012993.1|20101-20908 gi|959147947|gb|CP012988.1|73119-72312
Resfinder	Sul|sul2_14_AJ514834|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_14_AJ514834
ARG-ANNOT	Bla|CMY-4|AF420597|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-4:AF420597:1-1146:1146
NCBI	Bla|CMY-4|AF420597|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|823682865|emb|LN831184.1|63552-64697 gi|820773446|gb|KP742988.1|991-2136 gi|765526186|gb|KP205272.1|5553-6698 gi|345468041|dbj|AP012208.1|59442-60587 gi|695212645|ref|NG_036465.1|2058-3203 gi|16304121|gb|AF420597.1|AF420597|1-1146 gi|3334639|emb|AJ007826.1|137-1282
Resfinder	Bla|CMY-4|AF420597|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-4_1_AF420597
ARG-ANNOT	gi|45771831|emb|AJ632249.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-59:AJ632249:1-810:810
CARD	gi|45771831|emb|AJ632249.1|betalactams|Class_D_betalactamases|OXA	@phgb|AJ632249|0-810|ARO:3001772|OXA-59 [Burkholderia pseudomallei]
Lahey	gi|45771831|emb|AJ632249.1|betalactams|Class_D_betalactamases|OXA	CAG15145.1 AJ632249.1:1-810
NCBI	gi|45771831|emb|AJ632249.1|betalactams|Class_D_betalactamases|OXA	gi|939211797|gb|CP012042.1|1260501-1259692 gi|772956418|gb|CP009537.1|1326189-1325380 gi|772913900|gb|CP009473.1|701873-701064 gi|772893400|gb|CP009297.1|2802252-2801443 gi|701281876|gb|CP009160.1|1125119-1125928 gi|701279297|gb|CP009163.1|1958561-1959370 gi|701269708|gb|CP009156.1|1702575-1703384 gi|701263401|gb|CP009150.1|2632443-2631634 gi|701257438|gb|CP009164.1|2649082-2649891 gi|685786072|gb|CP009127.1|63365-62556
Resfinder	gi|45771831|emb|AJ632249.1|betalactams|Class_D_betalactamases|OXA	blaOXA-59_1_AJ632249
ARG-ANNOT	Bla|ROB-1|AF022114|303-1220|918|betalactams|Class_A_betalactamases|ROB	(Bla)ROB-1:AF022114:303-1220:918
NCBI	Bla|ROB-1|AF022114|303-1220|918|betalactams|Class_A_betalactamases|ROB	gi|695198071|ref|NG_034896.1|303-1220 gi|399920115|gb|JN202624.1|15522-15672
Resfinder	Bla|ROB-1|AF022114|303-1220|918|betalactams|Class_A_betalactamases|ROB	blaROB-1_2_AF022114
ARG-ANNOT	Bla|IMI-3|GU015024|1-879|879|betalactams|Class_A_betalactamases|IMI	(Bla)IMI-3:GU015024:1-879:879
CARD	Bla|IMI-3|GU015024|1-879|879|betalactams|Class_A_betalactamases|IMI	@phgb|GU015024|0-879|ARO:3001860|IMI-3 [Enterobacter cloacae]
Lahey	Bla|IMI-3|GU015024|1-879|879|betalactams|Class_A_betalactamases|IMI	ACX71212.1 GU015024.1:1-879
NCBI	Bla|IMI-3|GU015024|1-879|879|betalactams|Class_A_betalactamases|IMI	gi|261349302|gb|GU015024.1|1-879
Resfinder	Bla|IMI-3|GU015024|1-879|879|betalactams|Class_A_betalactamases|IMI	blaIMI-3_1_GU015024
ARG-ANNOT	Gly|VanTc|DQ022190|1802-3898|2097|Glycopeptides|VanC-type_resistance_protein|VANTC	(Gly)VanTc:DQ022190:1802-3898:2097
NCBI	Gly|VanTc|DQ022190|1802-3898|2097|Glycopeptides|VanC-type_resistance_protein|VANTC	gi|67479934|gb|DQ022190.1|1802-3898
Resfinder	Gly|VanTc|DQ022190|1802-3898|2097|Glycopeptides|VanC-type_resistance_protein|VANTC	VanT-C_1_DQ022190
NCBI	gi|16798373|gb|AF427129.1|betalactams|Class_A_betalactamases|TEM	gi|16798373|gb|AF427129.1|AF427129|1-1103
NCBI	Flq|CP001138.1|gene3329|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|807109228|gb|CP011259.1|294232-291974 gi|563346448|gb|CP006876.1|3226439-3224181 gi|197211055|gb|CP001138.1|3260817-3258559
ARG-ANNOT	Bla|LEN-24|AM850914|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-24:AM850914:1-861:861
NCBI	Bla|LEN-24|AM850914|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|197724700|emb|AM850914.2|1-891
CARD	CARD|phgb|JQ768046|7760-9440|ARO:3001313|facT|Elfamycins|Elfamycin_efflux_pumps|FACT	@phgb|JQ768046|7760-9440|ARO:3001313|facT [Streptomyces sp. WAC5292]
NCBI	CARD|phgb|JQ768046|7760-9440|ARO:3001313|facT|Elfamycins|Elfamycin_efflux_pumps|FACT	gi|388890562|gb|JQ768046.1|7761-9441
ARG-ANNOT	Bla|cfxA6|GQ342996|798-1793|966|betalactams|Class_A_betalactamases|CFX	(Bla)cfxA6:GQ342996:798-1793:966
CARD	Bla|cfxA6|GQ342996|798-1793|966|betalactams|Class_A_betalactamases|CFX	@phgb|GQ342996|797-1793|ARO:3003097|CfxA6 [uncultured organism]
NCBI	Bla|cfxA6|GQ342996|798-1793|966|betalactams|Class_A_betalactamases|CFX	gi|254966759|gb|GQ343001.1|670-1665 gi|254966744|gb|GQ342996.1|798-1793
Resfinder	Bla|cfxA6|GQ342996|798-1793|966|betalactams|Class_A_betalactamases|CFX	cfxA6_1_GQ342996
CARD	CARD|phgb|AP009048|1191352-1192024|ARO:3000834|phoP|Multi-drug_resistance|Multi-drug_efflux_pumps|PHOP|RequiresSNPConfirmation	@phgb|AP009048|1191352-1192024|ARO:3000834|phoP [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|AP009048|1191352-1192024|ARO:3000834|phoP|Multi-drug_resistance|Multi-drug_efflux_pumps|PHOP|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|4028700-4029372 gi|937526251|gb|CP012870.1|3451899-3451227 gi|937521852|gb|CP012869.1|3451900-3451228 gi|937517453|gb|CP012868.1|3451889-3451217 gi|817589947|gb|CP011324.1|1183462-1184134 gi|817585806|gb|CP011323.1|1183462-1184134 gi|817581666|gb|CP011322.1|1183461-1184133 gi|817577526|gb|CP011321.1|1183462-1184134 gi|817573384|gb|CP011320.1|1189000-1189672 gi|749139368|gb|CP010456.1|1196892-1197564
CARD	CARD|phgb|EU408358|27458-28439|ARO:3002483|LRA-5|betalactams|Class_B_betalactamases|LRA	@phgb|EU408358|27458-28439|ARO:3002483|LRA-5 [uncultured bacterium BLR5]
NCBI	CARD|phgb|EU408358|27458-28439|ARO:3002483|LRA-5|betalactams|Class_B_betalactamases|LRA	gi|169647660|gb|EU408358.1|27459-28440
Resfinder	Gly|VanT-N_1_JF802084|Glycopeptides|VanN-type_resistance_protein|VANTN	VanT-N_1_JF802084
ARG-ANNOT	Bla|VIM-28|JF900599|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-28:JF900599:1-801:801
CARD	Bla|VIM-28|JF900599|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|JF900599|0-801|ARO:3002298|VIM-28 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-28|JF900599|1-801|801|betalactams|Class_B_betalactamases|VIM	AEI25539.1 JF900599.1:1-801
NCBI	Bla|VIM-28|JF900599|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|336169750|gb|JF900599.1|1-801 gi|825088496|gb|KP975075.1|7975-7820 gi|584292460|gb|KF850517.1|1484-1639 gi|346720643|gb|JF915437.1|900-1055 gi|346720640|gb|JF905459.1|1522-1677 gi|283580179|gb|GU250441.1|953-1108 gi|283580176|gb|GU250440.1|932-1087 gi|270210847|gb|GU181269.1|1564-1719 gi|269978383|gb|GU181265.1|1983-2138 gi|194032844|emb|FM179467.1|1088-1243
Resfinder	Bla|VIM-28|JF900599|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-28_1_JF900599
CARD	CARD|phgb|AL009126|339155-339749|ARO:3003059|tmrB|Tunicamycin|ATP-binding_tunicamycin_resistance|TMRB	@phgb|AL009126|339155-339749|ARO:3003059|tmrB [Bacillus subtilis subsp. subtilis str. 168]
NCBI	CARD|phgb|AL009126|339155-339749|ARO:3003059|tmrB|Tunicamycin|ATP-binding_tunicamycin_resistance|TMRB	gi|983204966|gb|CP014166.1|339153-339747 gi|807072327|gb|CP011115.1|339154-339748 gi|749183975|gb|CP010314.1|339156-339750 gi|728887195|gb|CP010053.1|339166-339760 gi|728882887|gb|CP010052.1|339163-339757 gi|724425628|emb|LN680001.1|339142-339736 gi|723796434|emb|LN649259.1|339142-339736 gi|649013680|gb|CP008698.1|339164-339758 gi|649009321|gb|CP007800.1|339164-339758 gi|558566549|gb|CP006881.1|339161-339755
ARG-ANNOT	AGly|AadK-Pm|CP002869|4442322-4441435|888|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	(AGly)AadK-Pm:CP002869:c4442322-4441435:888
NCBI	AGly|AadK-Pm|CP002869|4442322-4441435|888|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|336295553|gb|CP002869.1|4442322-4441435
CARD	gi|557477790|gb|KF460532.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF460532|0-831|ARO:3001549|OXA-362 [Acinetobacter lwoffii]
Lahey	gi|557477790|gb|KF460532.1|betalactams|Class_D_betalactamases|OXA	AHA11125.1 KF460532.1:1-831
NCBI	gi|557477790|gb|KF460532.1|betalactams|Class_D_betalactamases|OXA	gi|557477790|gb|KF460532.1|1-831
NCBI	1727|AY162283.2|AY162283|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|38154309|gb|AY162283.2|443-961 gi|14133992|gb|AF369871.1|1492-2010
NCBI	1656|AY920928.1|AY920928|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	gi|66269634|gb|AY920928.1|6009-6542
ARG-ANNOT	gi|84782428|gb|DQ335566.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-92:DQ335566:1-825:825
CARD	gi|84782428|gb|DQ335566.1|betalactams|Class_D_betalactamases|OXA	@phgb|DQ335566|0-825|ARO:3001632|OXA-92 [Acinetobacter baumannii]
Lahey	gi|84782428|gb|DQ335566.1|betalactams|Class_D_betalactamases|OXA	ABC61637.1 DQ335566.1:1-825
NCBI	gi|84782428|gb|DQ335566.1|betalactams|Class_D_betalactamases|OXA	gi|84782428|gb|DQ335566.1|1-825
Resfinder	gi|84782428|gb|DQ335566.1|betalactams|Class_D_betalactamases|OXA	blaOXA-92_1_DQ335566
CARD	CARD|phgb|AY700571|0-879|ARO:3002314|KPC-4|betalactams|Class_A_betalactamases|KPC	@phgb|AY700571|0-879|ARO:3002314|KPC-4 [Enterobacter sp. E624]
NCBI	CARD|phgb|AY700571|0-879|ARO:3002314|KPC-4|betalactams|Class_A_betalactamases|KPC	gi|909893998|gb|CP012168.1|175556-174677 gi|902717325|gb|KR091915.1|29965-30844 gi|429201046|gb|JX193301.1|54275-55154 gi|392356698|gb|JQ837276.1|28045-28924 gi|218685693|gb|FJ473382.1|365-1244 gi|168830102|gb|EU447304.1|16-895 gi|51557251|gb|AY700571.1|1-880
CARD	gi|698174221|gb|KM087865.1|betalactams|Class_D_betalactamases|OXA	@phgb|KM087865|0-843|ARO:3001583|OXA-397 [Acinetobacter baumannii]
Lahey	gi|698174221|gb|KM087865.1|betalactams|Class_D_betalactamases|OXA	AIT76118.1 KM087865.1:1-843
NCBI	gi|698174221|gb|KM087865.1|betalactams|Class_D_betalactamases|OXA	gi|698174221|gb|KM087865.1|1-843
ARG-ANNOT	Gly|VanX-M|FJ349556|5894-6502|609|Glycopeptides|VanM-type_resistance_protein|VANXM	(Gly)VanX-M:FJ349556:5894-6502:609
CARD	Gly|VanX-M|FJ349556|5894-6502|609|Glycopeptides|VanM-type_resistance_protein|VANXM	@phgb|FJ349556|5893-6502|ARO:3002953|vanXM [Enterococcus faecium]
NCBI	Gly|VanX-M|FJ349556|5894-6502|609|Glycopeptides|VanM-type_resistance_protein|VANXM	gi|220901852|gb|FJ349556.1|5894-6502
Resfinder	Gly|VanX-M|FJ349556|5894-6502|609|Glycopeptides|VanM-type_resistance_protein|VANXM	VanX-M_1_FJ349556
CARD	Bla|OXA-232_1_JX423831|betalactams|Class_D_betalactamases|OXA	@phgb|JX423831|2676-3474|ARO:3001778|OXA-232 [Escherichia coli]
Lahey	Bla|OXA-232_1_JX423831|betalactams|Class_D_betalactamases|OXA	AGD91915.1 JX423831.1:2677-3474
NCBI	Bla|OXA-232_1_JX423831|betalactams|Class_D_betalactamases|OXA	gi|937297903|gb|CP012755.1|3878-4675 gi|667713655|gb|CP006802.1|3878-4675 gi|444236140|gb|JX423831.1|2677-3474
Resfinder	Bla|OXA-232_1_JX423831|betalactams|Class_D_betalactamases|OXA	blaOXA-232_1_JX423831
ARG-ANNOT	1306|AM412777.1|AM412777|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-101:AM412777:118-918:801
CARD	1306|AM412777.1|AM412777|betalactams|Class_D_betalactamases|OXA	@phgb|AM412777|117-918|ARO:3001439|OXA-101 [Citrobacter freundii]
Lahey	1306|AM412777.1|AM412777|betalactams|Class_D_betalactamases|OXA	CAL85435.1 AM412777.1:118-918
NCBI	1306|AM412777.1|AM412777|betalactams|Class_D_betalactamases|OXA	gi|686483915|gb|KM111259.1|757-1557 gi|558518452|gb|KF040452.1|1764-2564 gi|118627599|emb|AM412777.1|118-918
Resfinder	1306|AM412777.1|AM412777|betalactams|Class_D_betalactamases|OXA	blaOXA-101_1_AM412777
CARD	gi|556904155|gb|KF421161.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF421161|0-822|ARO:3001545|OXA-358 [Acinetobacter calcoaceticus]
Lahey	gi|556904155|gb|KF421161.1|betalactams|Class_D_betalactamases|OXA	AGZ83154.1 KF421161.1:1-822
NCBI	gi|556904155|gb|KF421161.1|betalactams|Class_D_betalactamases|OXA	gi|556904155|gb|KF421161.1|1-822
Resfinder	gi|556904155|gb|KF421161.1|betalactams|Class_D_betalactamases|OXA	blaOXA-358_1_KF421161
ARG-ANNOT	AGly|Aph6-I|X01702|485-1285|801|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	(AGly)Aph6-I:X01702:485-1285:801
CARD	AGly|Aph6-I|X01702|485-1285|801|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	@phgb|X01702|484-1285|ARO:3002659|APH(6)-Ic [Escherichia coli]
NCBI	AGly|Aph6-I|X01702|485-1285|801|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|768968335|gb|KM409652.1|8347-9147 gi|381287545|gb|JN983042.1|196764-197564 gi|159885477|dbj|AB366441.1|11310-12110 gi|150958624|gb|CP000744.1|3857121-3856321 gi|115500638|dbj|AB255435.1|117696-118496 gi|31321897|gb|AY037297.1|3506-2706 gi|405822|gb|U00004.1|2785-3585 gi|2055395|gb|U90436.1|XXU90436|9333-10133 gi|43744|emb|X01702.1|485-1285 gi|818850|gb|U25548.1|XXU25548|4700-5500
Resfinder	AGly|Aph6-I|X01702|485-1285|801|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	aph(6)-Ic_1_X01702
ARG-ANNOT	Bla|OXA-141|EF552405|13-840|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-141:EF552405:13-840:828
CARD	Bla|OXA-141|EF552405|13-840|828|betalactams|Class_D_betalactamases|OXA	@phgb|EF552405|12-840|ARO:3001802|OXA-141 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-141|EF552405|13-840|828|betalactams|Class_D_betalactamases|OXA	ABQ15112.1 EF552405.1:13-840
NCBI	Bla|OXA-141|EF552405|13-840|828|betalactams|Class_D_betalactamases|OXA	gi|146261808|gb|EF552405.1|13-840
Resfinder	Bla|OXA-141|EF552405|13-840|828|betalactams|Class_D_betalactamases|OXA	blaOXA-141_1_EF552405
NCBI	Tet|tetM_9_X56353|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|569556619|gb|KF861545.1|2622-4541 gi|291587249|gb|GU593054.1|8413-6494 gi|259045723|gb|GQ420676.1|345-2264 gi|23262700|gb|AY047229.1|1450-3369 gi|47061|emb|X56353.1|223-2142 gi|1277145|gb|U50983.1|CVU50983|205-2124
Resfinder	Tet|tetM_9_X56353|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_9_X56353
ARG-ANNOT	Bla|OXY1-4|AY077483|183-1055|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY1-4:AY077483:183-1055:873
CARD	Bla|OXY1-4|AY077483|183-1055|873|betalactams|Class_A_betalactamases|OXY	@phgb|AY077483|182-1055|ARO:3002392|OXY-1-4 [Klebsiella oxytoca]
NCBI	Bla|OXY1-4|AY077483|183-1055|873|betalactams|Class_A_betalactamases|OXY	gi|18844707|gb|AY077483.1|183-1055
Resfinder	Bla|OXY1-4|AY077483|183-1055|873|betalactams|Class_A_betalactamases|OXY	blaOXY-1-4_4_AY077483
ARG-ANNOT	Bla|OKP-A-3|AM051140|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-3:AM051140:1-861:861
CARD	Bla|OKP-A-3|AM051140|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051140|0-861|ARO:3002420|OKP-A-3 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-3|AM051140|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655061|emb|AM051140.1|1-861
Resfinder	Bla|OKP-A-3|AM051140|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-3_1_AM051140
CARD	CARD|phgb|AF326777|23980-24640|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|AF326777|23980-24640|ARO:3002670|cat [Shigella flexneri 2a]
NCBI	Bla|SHV-77_1_EF373975|betalactams|Class_A_betalactamases|SHV	gi|125658593|gb|EF373975.1|1-861
Resfinder	Bla|SHV-77_1_EF373975|betalactams|Class_A_betalactamases|SHV	blaSHV-77_1_EF373975
CARD	gi|557477792|gb|KF460533.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF460533|0-831|ARO:3001550|OXA-363 [Acinetobacter lwoffii]
Lahey	gi|557477792|gb|KF460533.1|betalactams|Class_D_betalactamases|OXA	AHA11126.1 KF460533.1:1-831
NCBI	gi|557477792|gb|KF460533.1|betalactams|Class_D_betalactamases|OXA	gi|557477792|gb|KF460533.1|1-831
ARG-ANNOT	Bla|TEM-2|AY529705|167-1027|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-2:AY529705:167-1027:861
CARD	Bla|TEM-2|AY529705|167-1027|861|betalactams|Class_A_betalactamases|TEM	@phgb|X54606|214-1075|ARO:3000874|TEM-2 [Pseudomonas aeruginosa]
Lahey	Bla|TEM-2|AY529705|167-1027|861|betalactams|Class_A_betalactamases|TEM	CAA38429.1 X54606.1:215-1075
NCBI	Bla|TEM-2|AY529705|167-1027|861|betalactams|Class_A_betalactamases|TEM	gi|403398703|gb|JX469833.1|62684-61824 gi|356472769|gb|HQ659758.1|7942-8802 gi|157277474|tpe|BN000925.1|6499-5639 gi|114703507|emb|AM261760.1|6499-5639 gi|109389586|gb|DQ388534.1|24141-25001 gi|53794349|gb|AY741093.1|50374-49514 gi|42718126|gb|AY529705.1|167-1027 gi|3859493|gb|AF080442.1|3942-4802 gi|21998650|emb|X54606.1|215-1075 gi|8117219|dbj|AB043582.1|7530-6670
Resfinder	Bla|TEM-2|AY529705|167-1027|861|betalactams|Class_A_betalactamases|TEM	blaTEM-2_1_X54606
ARG-ANNOT	gi|401871166|gb|JX121121.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-154:JX121121:1-858:858
CARD	gi|401871166|gb|JX121121.1|betalactams|Class_A_betalactamases|SHV	@phgb|JX121121|0-858|ARO:3001193|SHV-154 [Klebsiella pneumoniae]
Lahey	gi|401871166|gb|JX121121.1|betalactams|Class_A_betalactamases|SHV	AFQ23960.1 JX121121.1:1-858
NCBI	gi|401871166|gb|JX121121.1|betalactams|Class_A_betalactamases|SHV	gi|401871166|gb|JX121121.1|1-858
Resfinder	gi|401871166|gb|JX121121.1|betalactams|Class_A_betalactamases|SHV	blaSHV-154_1_JX121121
ARG-ANNOT	Flq|QnrA4|DQ058662|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	(Flq)QnrA4:DQ058662:1-657:657
CARD	Flq|QnrA4|DQ058662|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	@phgb|DQ058662|0-657|ARO:3002710|QnrA4 [Shewanella algae]
NCBI	Flq|QnrA4|DQ058662|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	gi|70609063|gb|DQ058662.1|1-657
Resfinder	Flq|QnrA4|DQ058662|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	QnrA4_1_DQ058662
CARD	CARD|pvgb|FQ312006|705198-706383|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|FQ312006|705198-706383|ARO:3001312|elfamycin resistant EF-Tu [Haemophilus influenzae 10810]
NCBI	CARD|pvgb|FQ312006|705198-706383|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|301168602|emb|FQ312006.1|705199-706384 gi|301168602|emb|FQ312006.1|781883-780698
CARD	CARD|phgb|JN086160|1582-2407|ARO:3001777|OXA-347|betalactams|Class_D_betalactamases|OXA	@phgb|JN086160|1582-2407|ARO:3001777|OXA-347 [uncultured bacterium]
NCBI	CARD|phgb|JN086160|1582-2407|ARO:3001777|OXA-347|betalactams|Class_D_betalactamases|OXA	gi|969868918|gb|CP013690.1|2394712-2395537 gi|969868918|gb|CP013690.1|3425301-3426126 gi|356668588|gb|JN086160.1|1583-2408
ARG-ANNOT	AGly|Aac3-Ik|BX571856|765853-766296|444|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-Ik:BX571856:765853-766296:444
NCBI	AGly|Aac3-Ik|BX571856|765853-766296|444|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|703576232|gb|CP009554.1|718685-719128 gi|685631213|gb|CP009361.1|693426-693869 gi|312436391|gb|CP002110.1|2622353-2621910 gi|49240382|emb|BX571856.1|765853-766296
NCBI	Tet|tet33_3_DQ390458|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET33	gi|89513168|gb|DQ390458.1|31989-33248
Resfinder	Tet|tet33_3_DQ390458|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET33	tet(33)_3_DQ390458
NCBI	AGly|M26879|gene|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|983204966|gb|CP014166.1|2577221-2576367 gi|846133629|gb|CP011882.1|3511576-3510722 gi|807072327|gb|CP011115.1|2736537-2735683 gi|749183975|gb|CP010314.1|2716029-2715175 gi|728887195|gb|CP010053.1|2736299-2735445 gi|728882887|gb|CP010052.1|2736548-2735694 gi|724425628|emb|LN680001.1|2754547-2753693 gi|723796434|emb|LN649259.1|2754545-2753691 gi|670919138|gb|CP005997.1|2542684-2541830 gi|649013680|gb|CP008698.1|2709302-2708448
Resfinder	AGly|M26879|gene|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	aadK_1_M26879
ARG-ANNOT	Bla|OXA-106|EF650032|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-106:EF650032:1-825:825
CARD	Bla|OXA-106|EF650032|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|EF650032|0-825|ARO:3001637|OXA-106 [Acinetobacter baumannii]
Lahey	Bla|OXA-106|EF650032|1-825|825|betalactams|Class_D_betalactamases|OXA	ABV31686.1 EF650032.1:1-825
NCBI	Bla|OXA-106|EF650032|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|157285898|gb|EF650032.1|1-825
Resfinder	Bla|OXA-106|EF650032|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-106_1_EF650032
CARD	1181|X91840.1|X91840|betalactams|Class_C_betalactamases|CMY	@phgb|X91840|0-1146|ARO:3002013|CMY-2 [Klebsiella pneumoniae]
Lahey	1181|X91840.1|X91840|betalactams|Class_C_betalactamases|CMY	CAA62957.1 X91840.1:1924-3069
NCBI	1181|X91840.1|X91840|betalactams|Class_C_betalactamases|CMY	gi|950835949|gb|KT894734.1|12318-13463 gi|959241961|gb|KT224429.1|1-1146 gi|959241959|gb|KT224428.1|1-1146 gi|949882152|gb|CP012936.1|9322-10467 gi|949877091|gb|CP012929.1|12633-13778 gi|949872114|gb|CP012923.1|9322-10467 gi|929915231|gb|KT347600.1|89031-90176 gi|927277255|gb|KT037097.1|1-1146 gi|928084068|gb|CP012683.1|32698-33843 gi|823758767|gb|KP207590.1|3152-4297
Resfinder	1181|X91840.1|X91840|betalactams|Class_C_betalactamases|CMY	blaCMY-2_1_X91840
CARD	CARD|phgb|JN969893|0-873|ARO:3001990|CTX-M-131|betalactams|Class_A_betalactamases|CTX	@phgb|JN969893|0-873|ARO:3001990|CTX-M-131 [Providencia rettgeri]
Lahey	CARD|phgb|JN969893|0-873|ARO:3001990|CTX-M-131|betalactams|Class_A_betalactamases|CTX	AEW46676.3 JN969893.3:2531-3406
NCBI	CARD|phgb|JN969893|0-873|ARO:3001990|CTX-M-131|betalactams|Class_A_betalactamases|CTX	gi|823104948|gb|JN969893.3|2531-3406
NCBI	ACou|AF329398.1|gene37|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|gyrB|RequiresSNPConfirmation	gi|28627815|gb|AY136281.1|1-1718 gi|24940583|gb|AF329398.1|40574-42291
CARD	CARD|phgb|JX514369|296-1442|ARO:3002108|CMY-95|betalactams|Class_C_betalactamases|CMY	@phgb|JX514369|296-1442|ARO:3002108|CMY-95 [Escherichia coli]
NCBI	CARD|phgb|JX514369|296-1442|ARO:3002108|CMY-95|betalactams|Class_C_betalactamases|CMY	gi|442540410|gb|JX514369.1|297-1443
NCBI	Fos|fosA_15_CP002889|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|365747213|gb|CP002886.1|545888-546469
Resfinder	Fos|fosA_15_CP002889|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_15_CP002889
CARD	CARD|phgb|U00096|1188315-1189776|ARO:3000835|phoQ|Multi-drug_resistance|MDR_regulator|PHOQ	@phgb|U00096|1188315-1189776|ARO:3000835|phoQ [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|1188315-1189776|ARO:3000835|phoQ|Multi-drug_resistance|MDR_regulator|PHOQ	gi|985000614|gb|CP014225.1|4027240-4028701 gi|939732440|gb|CP011343.2|1186613-1188074 gi|939731527|gb|CP011342.2|1187122-1188583 gi|937526251|gb|CP012870.1|3453359-3451898 gi|937521852|gb|CP012869.1|3453360-3451899 gi|937517453|gb|CP012868.1|3453349-3451888 gi|932857508|emb|LN877770.1|1569402-1570863 gi|923416119|gb|CP011113.1|1173680-1175141 gi|899729770|gb|CP012127.1|1164449-1165910 gi|899725419|gb|CP012126.1|1165709-1167170
CARD	CARD|phgb|NC_003197|400859-401324|ARO:3000504|golS|Multi-drug_resistance|MDR_regulator|GOLS	@phgb|NC_003197|400859-401324|ARO:3000504|golS [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	CARD|phgb|NC_003197|400859-401324|ARO:3000504|golS|Multi-drug_resistance|MDR_regulator|GOLS	gi|981191958|emb|LN999997.1|4972409-4971944 gi|973795115|gb|AE006468.2|400861-401326 gi|928084184|gb|CP012681.1|443291-443756 gi|821161554|gb|CP011428.1|441285-441750 gi|808186398|gb|CP007523.1|1175195-1175660 gi|777177758|emb|LN829401.1|2514291-2513826 gi|764057510|gb|CP007235.1|1173815-1174280 gi|674281104|gb|CP009102.1|369253-369718 gi|669110799|gb|CP007804.2|401553-402018 gi|661245796|dbj|AP014565.1|441531-441996
ARG-ANNOT	MLS|MsrD|AF274302|2462-3925|1464|MLS|Macrolide_resistance_efflux_pumps|MSRD	(MLS)MsrD:AF274302:2462-3925:1464
NCBI	MLS|MsrD|AF274302|2462-3925|1464|MLS|Macrolide_resistance_efflux_pumps|MSRD	gi|959991280|gb|CP013216.1|629535-630998 gi|909837468|gb|CP003357.2|1840580-1839117 gi|698841295|emb|LK020698.1|9043-10506 gi|697869830|gb|KJ545575.2|6836-5373 gi|649571968|emb|HG799503.1|19887-18424 gi|556027507|gb|CP006844.1|1763391-1761928 gi|321157379|emb|FR671415.1|19744-18281 gi|321157336|emb|FR671413.1|16896-15433 gi|298237097|gb|CP001993.1|2025078-2023615 gi|283440973|gb|CP001849.1|988641-990104
Resfinder	MLS|MsrD|AF274302|2462-3925|1464|MLS|Macrolide_resistance_efflux_pumps|MSRD	msr(D)_2_AF274302
NCBI	gi|2970344|gb|AF047171.1|betalactams|Class_A_betalactamases|TEM	gi|695198329|ref|NG_034953.1|1-1001
CARD	Bla|TLA-1_1_AF148067|betalactams|Class_A_betalactamases|TLA	@phgb|AF148067|213-1158|ARO:3003202|TLA-1 [Escherichia coli]
NCBI	Bla|TLA-1_1_AF148067|betalactams|Class_A_betalactamases|TLA	gi|695223747|ref|NG_040885.1|3181-4125 gi|695199154|ref|NG_035175.1|214-1158
Resfinder	Bla|TLA-1_1_AF148067|betalactams|Class_A_betalactamases|TLA	blaTLA-1_1_AF148067
NCBI	ACou|NC_003923.1003353|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|827443540|gb|CP011528.1|1321707-1323704 gi|760495145|gb|CP010944.1|1263867-1265864 gi|760491253|gb|CP010943.1|1259520-1261517 gi|748807120|gb|CP010526.1|1408618-1410615 gi|47118312|dbj|BA000033.2|1356318-1358315
ARG-ANNOT	AGly|Aph3-VIb|AJ627643|4934-5713|780|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-VIb:AJ627643:4934-5713:780
NCBI	AGly|Aph3-VIb|AJ627643|4934-5713|780|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|76556251|emb|AJ627643.4|4934-5713
Resfinder	AGly|Aph3-VIb|AJ627643|4934-5713|780|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-VIb_1_AJ627643
NCBI	gi|752115649|gb|KM926621.1|betalactams|Class_C_betalactamases|ACT	gi|752115649|gb|KM926621.1|650-1897
ARG-ANNOT	AGly|StrA|AB366441|22458-23261|804|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	(AGly)StrA:AB366441:22458-23261:804
NCBI	AGly|StrA|AB366441|22458-23261|804|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|984686374|gb|HQ700358.2|20308-19505 gi|974751547|gb|KU130294.1|219609-218806 gi|971493847|gb|CP010351.1|33455-34258 gi|873464424|gb|KR014106.1|34317-35120 gi|954171462|gb|KT151662.1|77777-78580 gi|954171374|gb|KT151661.1|77777-78580 gi|954171188|gb|KT151659.1|77741-78544 gi|954171094|gb|KT151658.1|77749-78552 gi|954171002|gb|KT151657.1|77777-78580 gi|954170914|gb|KT151656.1|77777-78580
Resfinder	AGly|StrA|AB366441|22458-23261|804|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	strA_1_M96392
ARG-ANNOT	gi|378829040|gb|JQ388884.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-141:JQ388884:1-861:861
CARD	gi|378829040|gb|JQ388884.1|betalactams|Class_A_betalactamases|SHV	@phgb|JQ388884|0-861|ARO:3001183|SHV-141 [Klebsiella pneumoniae]
Lahey	gi|378829040|gb|JQ388884.1|betalactams|Class_A_betalactamases|SHV	AFC60795.1 JQ388884.1:1-861
NCBI	gi|378829040|gb|JQ388884.1|betalactams|Class_A_betalactamases|SHV	gi|378829040|gb|JQ388884.1|1-861 gi|401871184|gb|JX121130.1|1-856
Resfinder	gi|378829040|gb|JQ388884.1|betalactams|Class_A_betalactamases|SHV	blaSHV-141_1_JQ388884
ARG-ANNOT	Bla|CTX-M-2|EF592570|5803-6678|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-2:EF592570:5803-6678:876
CARD	Bla|CTX-M-2|EF592570|5803-6678|876|betalactams|Class_A_betalactamases|CTX	@phgb|DQ125241|0-876|ARO:3001865|CTX-M-2 [Escherichia coli]
Lahey	Bla|CTX-M-2|EF592570|5803-6678|876|betalactams|Class_A_betalactamases|CTX	CAA63263.1 X92507.1:6-881
NCBI	Bla|CTX-M-2|EF592570|5803-6678|876|betalactams|Class_A_betalactamases|CTX	gi|765365340|dbj|AB751238.1|1-876 gi|697655994|dbj|AB976587.2|4457-5332 gi|695934953|gb|CP007636.1|141155-142030 gi|668347677|dbj|AB976589.1|102-977 gi|668347674|dbj|AB976588.1|1249-2124 gi|668347663|dbj|AB976586.1|1760-2635 gi|668347652|dbj|AB976582.1|91-966 gi|569555425|gb|CP004000.1|131647-132522 gi|695224103|ref|NG_041018.1|575-1450 gi|526482529|gb|KC879156.1|6096-6971
Resfinder	Bla|CTX-M-2|EF592570|5803-6678|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-2_1_EU622041
NCBI	gi|296951|emb|X65252.1|betalactams|Class_A_betalactamases|TEM	gi|296951|emb|X65252.1|175-1044
NCBI	gi|17026019|dbj|AB074433.1|betalactams|Class_B_betalactamases|IMP	gi|772402180|gb|KP177455.1|428-1307 gi|575771412|dbj|AB901046.1|81-960 gi|575771406|dbj|AB901044.1|53-932 gi|575771387|dbj|AB901039.1|56-935 gi|575771377|dbj|AB901037.1|48-927 gi|82754992|gb|DQ288156.1|979-1858 gi|695208228|ref|NG_035500.1|1-880 gi|537705843|dbj|AB472901.2|1170-1197
CARD	CARD|phgb|AJ250876|36-987|ARO:3000851|THIN-B|betalactams|Class_B_betalactamases|THINB	@phgb|AJ250876|36-987|ARO:3000851|THIN-B beta-lactamase [Janthinobacterium lividum]
NCBI	CARD|phgb|AJ250876|36-987|ARO:3000851|THIN-B|betalactams|Class_B_betalactamases|THINB	gi|13274145|emb|AJ250876.1|37-988
ARG-ANNOT	Flq|QnrS2|DQ485530|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	(Flq)QnrS2:DQ485530:1-657:657
CARD	Flq|QnrS2|DQ485530|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	@phgb|DQ485530|0-657|ARO:3002791|QnrS2 [Salmonella enterica subsp. enterica serovar Anatum]
NCBI	Flq|QnrS2|DQ485530|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|975025293|gb|CP013966.1|155945-155289 gi|970697877|gb|KT896503.1|2228-1572 gi|970697869|gb|KT896502.1|842-186 gi|970697861|gb|KT896501.1|7208-6552 gi|970697853|gb|KT896500.1|6552-5896 gi|970697845|gb|KT896499.1|2228-1572 gi|933686748|gb|KT315928.1|10346-9690 gi|933686720|gb|KT315927.1|10346-9690 gi|933686681|gb|KT315926.1|10186-9530 gi|933686337|gb|KR827394.1|163241-162585
Resfinder	Flq|QnrS2|DQ485530|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	QnrS2_1_JF261185
NCBI	1906|AJ584652.2|AJ584652|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|37653301|emb|AJ584652.2|2313-2913 gi|984881271|gb|CP014215.1|2294860-2294282 gi|984881271|gb|CP014215.1|2307624-2307046 gi|982900370|gb|KT736121.1|2077-2655 gi|974022331|gb|CP013924.1|1438873-1439451 gi|969995259|gb|KT317079.1|954-1532 gi|969995242|gb|KT317078.1|2840-3418 gi|969995220|gb|KT317076.1|3815-4393 gi|969995200|gb|KT317075.1|5701-6279 gi|969972869|gb|KT354506.1|4806-5384 gi|961377543|gb|KT326691.1|2060-2638
CARD	CARD|phgb|BA000032|476707-477559|ARO:3003151|CARB-22|betalactams|Class_A_betalactamases|CARB	@phgb|BA000032|476707-477559|ARO:3003151|CARB-22 [Vibrio parahaemolyticus RIMD 2210633]
NCBI	CARD|phgb|BA000032|476707-477559|ARO:3003151|CARB-22|betalactams|Class_A_betalactamases|CARB	gi|47118311|dbj|BA000032.2|476708-477560 gi|47118311|dbj|BA000032.2|477861-478121
ARG-ANNOT	Bla|MOX-1|D13304|233-1381|1159|betalactams|Class_C_betalactamases|MOX	(Bla)MOX-1:D13304:233-1381:1159
CARD	Bla|MOX-1|D13304|233-1381|1159|betalactams|Class_C_betalactamases|MOX	@phgb|D13304|232-1381|ARO:3002182|MOX-1 [Klebsiella pneumoniae]
Lahey	Bla|MOX-1|D13304|233-1381|1159|betalactams|Class_C_betalactamases|MOX	BAA02563.2 D13304.2:233-1381
NCBI	Bla|MOX-1|D13304|233-1381|1159|betalactams|Class_C_betalactamases|MOX	gi|695200064|ref|NG_035368.1|233-1381
Resfinder	Bla|MOX-1|D13304|233-1381|1159|betalactams|Class_C_betalactamases|MOX	blaMOX-1_1_D13304
NCBI	gi|666914763|gb|KJ776406.1|betalactams|Class_A_betalactamases|SHV	gi|666914763|gb|KJ776406.1|1-877
ARG-ANNOT	MLS|EreB|X03988|383-1642|1260|MLS|Macrolide_esterases|EREB	(MLS)EreB:X03988:383-1642:1260
NCBI	MLS|EreB|X03988|383-1642|1260|MLS|Macrolide_esterases|EREB	gi|83627312|dbj|AB207867.1|6079-7338 gi|695196186|ref|NG_034348.1|383-1642 gi|18542249|gb|AF466411.1|1-495
Resfinder	MLS|EreB|X03988|383-1642|1260|MLS|Macrolide_esterases|EREB	ere(B)_2_X03988
CARD	Bla|SHV-28_3_AF299299|betalactams|Class_A_betalactamases|SHV	@phgb|AF299299|0-861|ARO:3001086|SHV-28 [Klebsiella pneumoniae]
NCBI	Bla|SHV-28_3_AF299299|betalactams|Class_A_betalactamases|SHV	gi|10242337|gb|AF299299.1|AF299299|1-861
Resfinder	Bla|SHV-28_3_AF299299|betalactams|Class_A_betalactamases|SHV	blaSHV-28_3_AF299299
ARG-ANNOT	Bla|OXA-97|EF102240|11723-12565|843|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-97:EF102240:11723-12565:843
Lahey	Bla|OXA-97|EF102240|11723-12565|843|betalactams|Class_D_betalactamases|OXA	ABO33299.1 EF102240.1:12565-11723
NCBI	Bla|OXA-97|EF102240|11723-12565|843|betalactams|Class_D_betalactamases|OXA	gi|132252055|gb|EF102240.1|12565-11723
Resfinder	Bla|OXA-97|EF102240|11723-12565|843|betalactams|Class_D_betalactamases|OXA	blaOXA-97_1_EF102240
ARG-ANNOT	Bla|SHV-55|HQ877613|1-715|715|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-55:HQ877613:1-715:715
NCBI	Bla|SHV-55|HQ877613|1-715|715|betalactams|Class_A_betalactamases|SHV	gi|340523211|gb|HQ877613.1|1-715
ARG-ANNOT	Flq|QnrB29|HM439649|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB29:HM439649:37-681:645
CARD	Flq|QnrB29|HM439649|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HM439649|0-681|ARO:3002744|QnrB29 [Citrobacter freundii]
NCBI	Flq|QnrB29|HM439649|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224419|ref|NG_041071.1|1-681
Resfinder	Flq|QnrB29|HM439649|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB29_1_HM439649
ARG-ANNOT	1175|AF317511.1|AF317511|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-46:AF317511:2371-3171:801
CARD	1175|AF317511.1|AF317511|betalactams|Class_D_betalactamases|OXA	@phgb|JX131372|1478-2279|ARO:3001797|OXA-46 [Pseudomonas aeruginosa]
Lahey	1175|AF317511.1|AF317511|betalactams|Class_D_betalactamases|OXA	AAN63499.1 AF317511.1:2371-3171
NCBI	1175|AF317511.1|AF317511|betalactams|Class_D_betalactamases|OXA	gi|401668653|gb|JX131372.1|1479-2279 gi|118402720|emb|AJ969237.1|5220-6020 gi|24636971|gb|AF317511.1|2371-3171
Resfinder	1175|AF317511.1|AF317511|betalactams|Class_D_betalactamases|OXA	blaOXA-46_1_AJ969237
CARD	CARD|phgb|KF478993|6002-6704|ARO:3002930|vanRO|Glycopeptides|VanO-type_regulator|VANRO	@phgb|KF478993|6002-6704|ARO:3002930|vanRO [Rhodococcus equi]
NCBI	CARD|phgb|KF478993|6002-6704|ARO:3002930|vanRO|Glycopeptides|VanO-type_regulator|VANRO	gi|557879499|gb|KF478993.1|6003-6705
ARG-ANNOT	Bla|TEM-193|JN935135|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-193:JN935135:1-861:861
CARD	Bla|TEM-193|JN935135|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|JN935135|0-861|ARO:3001053|TEM-193 [Acinetobacter baumannii]
Lahey	Bla|TEM-193|JN935135|1-861|861|betalactams|Class_A_betalactamases|TEM	AFC75523.1 JN935135.1:1-861
NCBI	Bla|TEM-193|JN935135|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|378939966|gb|JN935135.1|1-861
Resfinder	Bla|TEM-193|JN935135|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-193_1_JN935135
NCBI	Sul|sul2_11_AY232670|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|30314008|gb|AY232670.1|157-972
Resfinder	Sul|sul2_11_AY232670|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_11_AY232670
ARG-ANNOT	Bla|PSE-4|AF313471|1422-2288|867|betalactams|Class_A_betalactamases|CARB	(Bla)PSE-4:AF313471:1422-2288:867
CARD	Bla|PSE-4|AF313471|1422-2288|867|betalactams|Class_A_betalactamases|CARB	@phgb|AF313471|1421-2288|ARO:3002240|CARB-1 [Pseudomonas aeruginosa]
Lahey	Bla|PSE-4|AF313471|1422-2288|867|betalactams|Class_A_betalactamases|CARB	AAK96394.1 AF313471.1:1422-2288
NCBI	Bla|PSE-4|AF313471|1422-2288|867|betalactams|Class_A_betalactamases|CARB	gi|15384482|gb|AF313471.1|1422-2288 gi|151527|gb|J05162.1|PSERCBC|170-1036
Resfinder	Bla|PSE-4|AF313471|1422-2288|867|betalactams|Class_A_betalactamases|CARB	blaCARB-1_1_AF313471
NCBI	gi|84105058|gb|DQ322460.1|betalactams|Class_A_betalactamases|SHV	gi|84105058|gb|DQ322460.1|1-965
ARG-ANNOT	Bla|CTX-M-95|FN813245|1912-2787|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-95:FN813245:1912-2787:876
CARD	Bla|CTX-M-95|FN813245|1912-2787|876|betalactams|Class_A_betalactamases|CTX	@phgb|FN813245|1911-2787|ARO:3001955|CTX-M-95 [Kluyvera ascorbata]
Lahey	Bla|CTX-M-95|FN813245|1912-2787|876|betalactams|Class_A_betalactamases|CTX	CBL80615.1 FN813245.1:1912-2787
NCBI	Bla|CTX-M-95|FN813245|1912-2787|876|betalactams|Class_A_betalactamases|CTX	gi|309951206|emb|FN813245.1|1912-2787
Resfinder	Bla|CTX-M-95|FN813245|1912-2787|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-95_1_FN813245
ARG-ANNOT	AGly|AadA24|HQ123586|88-768|781|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA24:HQ123586:88-768:781
NCBI	AGly|AadA24|HQ123586|88-768|781|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|822885045|dbj|LC055762.1|1451-2230 gi|635661957|gb|KJ547701.1|1390-2169 gi|575771373|dbj|AB901036.1|954-1733 gi|227461182|gb|FJ377586.1|804-25 gi|224551516|gb|FJ655779.1|718-1497 gi|157101027|emb|AM711129.1|1264-2043
Resfinder	AGly|AadA24|HQ123586|88-768|781|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA24_1_AM711129
NCBI	Bla|AF336096.1|gene1|betalactams|Mutant_porin_proteins|OMP36|RequiresSNPConfirmation	gi|13384118|gb|AF336096.1|1-1131
NCBI	Bla|ampH_2_HQ586946|betalactams|Class_D_betalactamases|OXA	gi|333448873|gb|HQ586946.1|1-795
Resfinder	Bla|ampH_2_HQ586946|betalactams|Class_D_betalactamases|OXA	ampH_2_HQ586946
ARG-ANNOT	gi|401871170|gb|JX121123.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-156:JX121123:1-861:861
CARD	gi|401871170|gb|JX121123.1|betalactams|Class_A_betalactamases|SHV	@phgb|JX121123|0-861|ARO:3001195|SHV-156 [Klebsiella pneumoniae]
Lahey	gi|401871170|gb|JX121123.1|betalactams|Class_A_betalactamases|SHV	AFQ23962.1 JX121123.1:1-861
NCBI	gi|401871170|gb|JX121123.1|betalactams|Class_A_betalactamases|SHV	gi|401871170|gb|JX121123.1|1-861
Resfinder	gi|401871170|gb|JX121123.1|betalactams|Class_A_betalactamases|SHV	blaSHV-156_1_JX121123
ARG-ANNOT	Tmt|DfrA21|AY552589|1-498|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA21:AY552589:1-498:498
CARD	Tmt|DfrA21|AY552589|1-498|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|AM932669|105-603|ARO:3003017|dfrA21 [Salmonella enterica subsp. enterica serovar Bredeney]
NCBI	Tmt|DfrA21|AY552589|1-498|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|701224663|gb|KF914295.1|70-567 gi|339279228|emb|FR875296.1|79-576 gi|238865601|gb|GQ139471.1|2843-3340 gi|221360485|emb|FM957883.1|88-585 gi|184216070|gb|EU622039.1|167-664 gi|695213027|ref|NG_036538.1|106-603 gi|695211267|ref|NG_036050.1|5516-6013 gi|45477546|gb|AY552589.1|1-498
Resfinder	Tmt|DfrA21|AY552589|1-498|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA21_1_AM932669
ARG-ANNOT	59|EF540343.1|EF540343|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	(AGly)Ant4-Ib:AJ506108:209-979:771
CARD	59|EF540343.1|EF540343|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	@phgb|EF540343|214-985|ARO:3002623|ANT(4')-Ia [Bacillus clausii]
NCBI	59|EF540343.1|EF540343|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	gi|922061703|gb|CP012475.1|1750025-1750795 gi|155793482|gb|EF540343.1|215-985 gi|31335372|emb|AJ506108.1|209-979
Resfinder	59|EF540343.1|EF540343|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	ant(4')-Ib_1_AJ506108
NCBI	Bla|GES-7_1_HM453325|betalactams|Class_A_betalactamases|GES	gi|316994923|gb|HM453325.1|2632-3495
Resfinder	Bla|GES-7_1_HM453325|betalactams|Class_A_betalactamases|GES	blaGES-7_1_HM453325
ARG-ANNOT	gi|315227434|gb|HQ322612.1|betalactams|Class_C_betalactamases|DHA	(Bla)DHA-6:HQ322612:1-1140:1140
CARD	gi|315227434|gb|HQ322612.1|betalactams|Class_C_betalactamases|DHA	@phgb|HQ322612|0-1140|ARO:3002135|DHA-6 [Escherichia coli]
Lahey	gi|315227434|gb|HQ322612.1|betalactams|Class_C_betalactamases|DHA	ADT91161.1 HQ322612.1:1-1140
NCBI	gi|315227434|gb|HQ322612.1|betalactams|Class_C_betalactamases|DHA	gi|315227434|gb|HQ322612.1|1-1140
Resfinder	gi|315227434|gb|HQ322612.1|betalactams|Class_C_betalactamases|DHA	blaDHA-6_1_HQ322612
ARG-ANNOT	Mdr|oqxB_1_EU370913|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXB	(Flq)OqxBgb:EU370913:47851-51003:3153
NCBI	Mdr|oqxB_1_EU370913|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXB	gi|975048878|gb|CP013962.1|234891-232442 gi|971338783|gb|CP006659.2|4170898-4173347 gi|961494526|gb|KT282968.1|25575-23126 gi|928083869|gb|CP012682.1|122578-125027 gi|902619892|gb|CP011989.1|1230784-1228335 gi|902613520|gb|CP011985.1|1231998-1229549 gi|902606058|gb|CP011976.1|1201200-1198751 gi|902598956|gb|CP011980.1|1211722-1209273 gi|820773184|gb|KM877269.1|76354-73905 gi|834762928|gb|CP006642.1|38041-35592
Resfinder	Mdr|oqxB_1_EU370913|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXB	oqxB_1_EU370913
CARD	MLS|ermD_2_L08389|MLS|23S_rRNA_methyltransferases|ERMD	@phgb|L08389|390-1254|ARO:3000495|ErmD [Bacillus anthracis]
NCBI	MLS|ermD_2_L08389|MLS|23S_rRNA_methyltransferases|ERMD	gi|143196|gb|L08389.1|BACMLSBRES|391-1254
Resfinder	MLS|ermD_2_L08389|MLS|23S_rRNA_methyltransferases|ERMD	erm(D)_2_L08389
ARG-ANNOT	Bla|CTX-M-78|AM982522|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-78:AM982522:1-876:876
CARD	Bla|CTX-M-78|AM982522|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AM982522|0-876|ARO:3001939|CTX-M-78 [Kluyvera georgiana]
Lahey	Bla|CTX-M-78|AM982522|1-876|876|betalactams|Class_A_betalactamases|CTX	CAQ42481.2 AM982522.2:1-876
NCBI	Bla|CTX-M-78|AM982522|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|209413817|emb|AM982522.2|1-876
Resfinder	Bla|CTX-M-78|AM982522|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-78_1_AM982522
ARG-ANNOT	gi|46401609|dbj|AB177384.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-36:AB177384:1-876:876
CARD	gi|46401609|dbj|AB177384.1|betalactams|Class_A_betalactamases|CTX	@phgb|AB177384|0-876|ARO:3001898|CTX-M-36 [Escherichia coli]
Lahey	gi|46401609|dbj|AB177384.1|betalactams|Class_A_betalactamases|CTX	BAD16611.1 AB177384.1:1-876
NCBI	gi|46401609|dbj|AB177384.1|betalactams|Class_A_betalactamases|CTX	gi|46401609|dbj|AB177384.1|1-876
Resfinder	gi|46401609|dbj|AB177384.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-36_1_AB177384
CARD	gi|55824372|gb|AY790341.1|betalactams|Class_A_betalactamases|SHV	@phgb|AY790341|0-861|ARO:3001114|SHV-59 [Klebsiella pneumoniae]
NCBI	gi|55824372|gb|AY790341.1|betalactams|Class_A_betalactamases|SHV	gi|55824372|gb|AY790341.1|1-862
NCBI	gi|233319|gb|S46063.1|betalactams|Class_A_betalactamases|CARB	gi|233319|gb|S46063.1|S46063|1-1060 gi|766547679|gb|KP116299.1|20688-20795 gi|660573358|gb|CP008790.1|155421-155524 gi|800908878|gb|KP345882.1|65907-65805 gi|481190437|gb|JX121641.1|52141-52243
CARD	Tet|AB089595.1|gene1|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	@phgb|AB089595|0-1206|ARO:3000166|tetB [Gram-negative bacterium TC71]
NCBI	Tet|AB089595.1|gene1|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	gi|29467396|dbj|AB089595.1|1-1206
ARG-ANNOT	1591|HE616889.1|HE616889|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-256:HE616889:1827-2627:801
CARD	1591|HE616889.1|HE616889|betalactams|Class_D_betalactamases|OXA	@phgb|HE616889|1826-2627|ARO:3001502|OXA-256 [Enterobacter cloacae]
Lahey	1591|HE616889.1|HE616889|betalactams|Class_D_betalactamases|OXA	CCE94500.1 HE616889.1:1827-2627
NCBI	1591|HE616889.1|HE616889|betalactams|Class_D_betalactamases|OXA	gi|359751189|emb|HE616889.1|1827-2627
Resfinder	1591|HE616889.1|HE616889|betalactams|Class_D_betalactamases|OXA	blaOXA-256_1_HE616889
NCBI	Bla|SHV-12_2_AY273807|betalactams|Class_A_betalactamases|SHV	gi|30908725|gb|AY273807.1|1-861
Resfinder	Bla|SHV-12_2_AY273807|betalactams|Class_A_betalactamases|SHV	blaSHV-12_2_AY273807
NCBI	gi|591389169|gb|KJ135345.1|betalactams|Class_D_betalactamases|OXA	gi|591389169|gb|KJ135345.1|1-917
CARD	Bla|NC_002745.1122814|betalactams|Penicillin_binding_protein_regulator|MECI	@phgb|NC_002745|48893-49265|ARO:3000124|mecI [Staphylococcus aureus subsp. aureus N315]
NCBI	Bla|NC_002745.1122814|betalactams|Penicillin_binding_protein_regulator|MECI	gi|985566378|dbj|LC068959.1|27644-28015 gi|985563902|dbj|AB721404.1|40794-41165 gi|974697948|dbj|AP017320.1|47894-48265 gi|937132516|gb|KT316803.1|8226-8597 gi|803444476|gb|CP011147.1|42374-42745 gi|647513781|dbj|AB478934.1|8837-9208 gi|556502764|emb|HG515014.1|15753-16124 gi|514002521|gb|CP006044.1|47883-48254 gi|386685405|dbj|AB665981.1|39110-39481 gi|345522997|gb|JF946492.1|16-387
ARG-ANNOT	Bla|OXY2-7|Z49084|312-1184|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-7:Z49084:312-1184:873
CARD	Bla|OXY2-7|Z49084|312-1184|873|betalactams|Class_A_betalactamases|OXY	@phgb|Z49084|311-1184|ARO:3002402|OXY-2-7 [Klebsiella oxytoca]
NCBI	Bla|OXY2-7|Z49084|312-1184|873|betalactams|Class_A_betalactamases|OXY	gi|1226009|emb|Z49084.1|312-1184
Resfinder	Bla|OXY2-7|Z49084|312-1184|873|betalactams|Class_A_betalactamases|OXY	blaOXY-2-7_7_Z49084
NCBI	Bla|OKP-B-14_1_DQ995288|betalactams|Class_A_betalactamases|OKP	gi|119434091|gb|DQ995288.1|3-824
Resfinder	Bla|OKP-B-14_1_DQ995288|betalactams|Class_A_betalactamases|OKP	blaOKP-B-14_1_DQ995288
ARG-ANNOT	MLS|LmrB|X79146|27840-28679|840|MLS|Lincosamide_efflux_pump|LMRB	(MLS)LmrB:X79146:27840-28679:840
NCBI	MLS|LmrB|X79146|27840-28679|840|MLS|Lincosamide_efflux_pump|LMRB	gi|159796227|gb|EU124663.1|29294-28455 gi|499194|emb|X79146.1|28679-27840
NCBI	Rif|ARR-6_1_FM955585|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|222065705|emb|FM955585.1|1371-1823
Resfinder	Rif|ARR-6_1_FM955585|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	ARR-6_1_FM955585
ARG-ANNOT	1660|JN596280.1|JN596280|betalactams|Class_A_betalactamases|GES	(Bla)GES-19:JN596280:1919-2782:864
CARD	1660|JN596280.1|JN596280|betalactams|Class_A_betalactamases|GES	@phgb|JN596280|1918-2782|ARO:3002348|GES-19 [Escherichia coli]
Lahey	1660|JN596280.1|JN596280|betalactams|Class_A_betalactamases|GES	AEZ05107.1 JN596280.1:1919-2782
NCBI	1660|JN596280.1|JN596280|betalactams|Class_A_betalactamases|GES	gi|374282203|gb|JN596280.1|1919-2782
Resfinder	1660|JN596280.1|JN596280|betalactams|Class_A_betalactamases|GES	blaGES-19_1_JN596280
NCBI	gi|620597417|gb|KJ461948.1|betalactams|Class_A_betalactamases|CTX	gi|620597417|gb|KJ461948.1|1-876
ARG-ANNOT	Phe|Cat-pC223|AY355285|1000-1647|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)Cat-pC223:AY355285:1000-1647:648
CARD	Phe|Cat-pC223|AY355285|1000-1647|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|NC_005000|17463-18111|ARO:3002670|cat [Enterococcus faecium]
NCBI	Phe|Cat-pC223|AY355285|1000-1647|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|938507137|gb|KP842560.1|18345-17698 gi|402478084|dbj|AB699882.1|18050-18697 gi|388535180|gb|CP003585.1|50789-51436 gi|260066142|gb|GQ900440.1|1627-980 gi|260066138|gb|GQ900436.1|1563-2210 gi|33868600|gb|AY355285.1|1000-1647 gi|28849319|gb|AF507977.1|17464-18111 gi|260066165|gb|GQ900463.1|1-429 gi|260066165|gb|GQ900463.1|4389-4607
Resfinder	Phe|Cat-pC223|AY355285|1000-1647|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	cat(pC233)_1_AY355285
ARG-ANNOT	Gly|VanA-Ao2|HQ679900|1034-2080|1047|Glycopeptides|VanA-type_resistance_protein|VANA	(Gly)VanA-Ao2:HQ679900:1034-2080:1047
NCBI	Gly|VanA-Ao2|HQ679900|1034-2080|1047|Glycopeptides|VanA-type_resistance_protein|VANA	gi|505812666|gb|CP003410.1|1534151-1535197 gi|336445587|gb|HQ679900.1|1034-2080 gi|4405960|gb|AF060799.1|AF060799|1568-2614
Resfinder	Gly|VanA-Ao2|HQ679900|1034-2080|1047|Glycopeptides|VanA-type_resistance_protein|VANA	VanAo2_6_HQ679900
ARG-ANNOT	MLS|LnuA|M14039|413-898|486|MLS|Lincosamide_nucleotidyltransferases|LNUA	(MLS)LnuA:M14039:413-898:486
CARD	MLS|LnuA|M14039|413-898|486|MLS|Lincosamide_nucleotidyltransferases|LNUA	@phgb|M14039|0-486|ARO:3000272|linA [Staphylococcus haemolyticus]
NCBI	MLS|LnuA|M14039|413-898|486|MLS|Lincosamide_nucleotidyltransferases|LNUA	gi|153042|gb|M14039.1|STALINAH|413-898
Resfinder	MLS|LnuA|M14039|413-898|486|MLS|Lincosamide_nucleotidyltransferases|LNUA	lnu(A)_1_M14039
ARG-ANNOT	Bla|OXA-73|AY762325|116-937|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-73:AY762325:116-937:822
CARD	Bla|OXA-73|AY762325|116-937|822|betalactams|Class_D_betalactamases|OXA	@phgb|AY762325|115-937|ARO:3001785|OXA-73 [Klebsiella pneumoniae]
Lahey	Bla|OXA-73|AY762325|116-937|822|betalactams|Class_D_betalactamases|OXA	AAW22056.1 AY762325.1:116-937
NCBI	Bla|OXA-73|AY762325|116-937|822|betalactams|Class_D_betalactamases|OXA	gi|56684452|gb|AY762325.1|116-937
Resfinder	Bla|OXA-73|AY762325|116-937|822|betalactams|Class_D_betalactamases|OXA	blaOXA-73_1_AY762325
CARD	CARD|phgb|AF024666|2207-2969|ARO:3000596|ErmX|MLS|23S_rRNA_methyltransferases|ERMX	@phgb|AF024666|2207-2969|ARO:3000596|ErmX [Corynebacterium striatum]
NCBI	CARD|phgb|AF024666|2207-2969|ARO:3000596|ErmX|MLS|23S_rRNA_methyltransferases|ERMX	gi|9945780|gb|AF024666.2|2208-2970 gi|695198883|ref|NG_035107.1|5610-4848
CARD	gi|725539566|gb|KM433672.1|betalactams|Class_D_betalactamases|OXA	@phgb|KM433672|0-822|ARO:3003161|OXA-423 [Acinetobacter baumannii]
Lahey	gi|725539566|gb|KM433672.1|betalactams|Class_D_betalactamases|OXA	AIY30332.1 KM433672.1:1-822
NCBI	gi|725539566|gb|KM433672.1|betalactams|Class_D_betalactamases|OXA	gi|725539566|gb|KM433672.1|1-822
ARG-ANNOT	1429|AY082011.1|AY082011|Glycopeptides|VanD-type_resistance_protein|VANXD	(Gly)VanX-D:AB242319:5046-5654:609
CARD	1429|AY082011.1|AY082011|Glycopeptides|VanD-type_resistance_protein|VANXD	@phgb|AY082011|6937-7546|ARO:3003070|vanXD [Enterococcus faecium]
NCBI	1429|AY082011.1|AY082011|Glycopeptides|VanD-type_resistance_protein|VANXD	gi|109240378|dbj|AB242319.1|5046-5654 gi|27461214|gb|AY082011.1|6938-7546 gi|54114872|dbj|AB183866.1|1109-1178 gi|11527843|gb|AF277571.1|AF277571|2299-2368
Resfinder	1429|AY082011.1|AY082011|Glycopeptides|VanD-type_resistance_protein|VANXD	VanX-D_1_AB242319
NCBI	Sul|NC_003197.1.1254818|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|981191958|emb|LN999997.1|1907400-1908248 gi|973795115|gb|AE006468.2|3464592-3463744 gi|928084184|gb|CP012681.1|3417132-3416284 gi|821161554|gb|CP011428.1|3492819-3491971 gi|808186398|gb|CP007523.1|4149048-4148200 gi|777181114|emb|LN829402.1|552874-553722 gi|764057510|gb|CP007235.1|4236272-4235424 gi|674281104|gb|CP009102.1|3400488-3399640 gi|669110799|gb|CP007804.2|3371060-3370212 gi|661245796|dbj|AP014565.1|3628207-3627359
CARD	Bla|Y17581.1|gene1|betalactams|Class_A_betalactamases|TEM	@phgb|Y17581|78-936|ARO:3000891|TEM-20 [Klebsiella pneumoniae]
Lahey	Bla|Y17581.1|gene1|betalactams|Class_A_betalactamases|TEM	CAA76793.1 Y17581.1:79-936
NCBI	Bla|Y17581.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|3282023|emb|Y17581.1|79-936
NCBI	Tet|tetL_1_HM235948|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	gi|307556794|gb|HM235948.1|1603-2985
Resfinder	Tet|tetL_1_HM235948|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	tet(L)_1_HM235948
NCBI	Flq|NC_002695.1.916822|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|937297913|gb|CP012802.1|2937681-2935054 gi|667689599|gb|CP008957.1|3153509-3150882 gi|386794017|gb|CP001925.1|2993275-2990648 gi|209765559|gb|EU898541.1|1-2628 gi|47118301|dbj|BA000007.2|3065190-3062563
ARG-ANNOT	Bla|OKP-B-2|AM051151|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-2:AM051151:1-861:861
CARD	Bla|OKP-B-2|AM051151|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051151|0-861|ARO:3002435|OKP-B-2 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-2|AM051151|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655081|emb|AM051151.1|1-861
Resfinder	Bla|OKP-B-2|AM051151|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-2_1_AM051151
ARG-ANNOT	Bla|CMY-72|JX440352|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-72:JX440352:1028-2173:1146
CARD	Bla|CMY-72|JX440352|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JX440352|1027-2173|ARO:3002085|CMY-72 [Citrobacter freundii]
Lahey	Bla|CMY-72|JX440352|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	AFU25641.1 JX440352.1:1028-2173
NCBI	Bla|CMY-72|JX440352|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	gi|407731522|gb|JX440352.1|1028-2173
Resfinder	Bla|CMY-72|JX440352|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-72_1_JX440352
ARG-ANNOT	Tet|TetW|AJ222769|3687-5606|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	(Tet)TetW:AJ222769:3687-5606:1920
NCBI	Tet|TetW|AJ222769|3687-5606|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	gi|955689447|gb|CP011307.1|2761781-2763700 gi|576941987|gb|KC790464.1|1-1920 gi|658429379|gb|AY601650.3|1257-3176 gi|338900465|dbj|AP012212.1|1074097-1076016 gi|295100182|emb|FP929045.1|449971-448052 gi|291556121|emb|FP929059.1|1659269-1657350 gi|254967123|gb|GQ343138.1|1993-74 gi|168259017|gb|EU434756.1|1445-3364 gi|46518251|emb|AJ427422.2|333-2252 gi|82470798|gb|AY603069.2|1978-3897
Resfinder	Tet|TetW|AJ222769|3687-5606|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	tet(W)_4_AJ427422
CARD	CARD|phgb|EU408350|11679-12585|ARO:3002488|LRA-9|betalactams|Class_B_betalactamases|LRA	@phgb|EU408350|11679-12585|ARO:3002488|LRA-9 [uncultured bacterium BLR9]
NCBI	CARD|phgb|EU408350|11679-12585|ARO:3002488|LRA-9|betalactams|Class_B_betalactamases|LRA	gi|169647637|gb|EU408350.1|11680-12586
NCBI	Flq|NC_002758.1121330|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|408436493|emb|HE579073.1|1334624-1337026 gi|408434508|emb|HE579071.1|1334575-1336977 gi|408432519|emb|HE579069.1|1334801-1337203 gi|408430526|emb|HE579067.1|1334760-1337162 gi|408428537|emb|HE579065.1|1334762-1337164 gi|408426549|emb|HE579063.1|1334766-1337168 gi|408424560|emb|HE579061.1|1334811-1337213 gi|408422572|emb|HE579059.1|1334819-1337221 gi|262073980|gb|CP001781.1|1369090-1371492 gi|156720466|dbj|AP009324.1|1434054-1436456
CARD	CARD|phgb|X95401|208-1069|ARO:3000914|TEM-45|betalactams|Class_A_betalactamases|TEM	@phgb|X95401|208-1069|ARO:3000914|TEM-45 [Escherichia coli]
NCBI	CARD|phgb|X95401|208-1069|ARO:3000914|TEM-45|betalactams|Class_A_betalactamases|TEM	gi|1524022|emb|X95401.1|209-1070
NCBI	Sul|sul2_19_AJ319822|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|18693100|emb|AJ319822.1|1779-2594
Resfinder	Sul|sul2_19_AJ319822|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_19_AJ319822
NCBI	Tet|tetH_4_U00792|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	gi|695209907|ref|NG_035903.1|3048-1846 gi|392871|gb|U00792.1|PMTETRH|716-1918 gi|356596244|gb|CP003022.1|336102-336144
Resfinder	Tet|tetH_4_U00792|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	tet(H)_4_U00792
CARD	MLS|ermG_2_L42817|MLS|23S_rRNA_methyltransferases|ERMG	@phgb|L42817|201-936|ARO:3000522|ErmG [Bacteroides thetaiotaomicron]
NCBI	MLS|ermG_2_L42817|MLS|23S_rRNA_methyltransferases|ERMG	gi|854705|gb|L42817.1|TRNMLSBRP|202-936
Resfinder	MLS|ermG_2_L42817|MLS|23S_rRNA_methyltransferases|ERMG	erm(G)_2_L42817
CARD	CARD|phgb|AL009126|916777-919348|ARO:3000863|mprF|Multi-drug_resistance|MDR_mutant_porin_proteins|mprF|RequiresSNPConfirmation	@phgb|AL009126|916777-919348|ARO:3000863|mprF [Bacillus subtilis subsp. subtilis str. 168]
NCBI	CARD|phgb|AL009126|916777-919348|ARO:3000863|mprF|Multi-drug_resistance|MDR_mutant_porin_proteins|mprF|RequiresSNPConfirmation	gi|983204966|gb|CP014166.1|896011-898582 gi|846133629|gb|CP011882.1|1827236-1829807 gi|807072327|gb|CP011115.1|916776-919347 gi|749183975|gb|CP010314.1|896267-898838 gi|728887195|gb|CP010053.1|916539-919110 gi|728882887|gb|CP010052.1|916787-919358 gi|724425628|emb|LN680001.1|916756-919327 gi|723796434|emb|LN649259.1|916754-919325 gi|670919138|gb|CP005997.1|858160-860731 gi|649013680|gb|CP008698.1|900326-902897
NCBI	gi|16798375|gb|AF427130.1|betalactams|Class_A_betalactamases|TEM	gi|16798375|gb|AF427130.1|AF427130|1-1103
NCBI	Sul|AM180355.1|gene1650|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|953830676|gb|CP013196.1|3132565-3133368 gi|777202877|emb|LN831030.1|1462866-1463669 gi|760237048|gb|CP010905.1|1664847-1665650 gi|733567460|emb|LN614756.1|1685497-1686300 gi|115249003|emb|AM180355.1|1680199-1681002
CARD	gi|698174207|gb|KM087858.1|betalactams|Class_C_betalactamases|MIR	@phgb|KM087858|0-1146|ARO:3002175|MIR-10 [Enterobacter asburiae]
Lahey	gi|698174207|gb|KM087858.1|betalactams|Class_C_betalactamases|MIR	AIT76111.1 KM087858.1:1-1146
NCBI	gi|698174207|gb|KM087858.1|betalactams|Class_C_betalactamases|MIR	gi|698174207|gb|KM087858.1|1-1146
ARG-ANNOT	1886|AF322577.2|AF322577|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-8:HQ651093:3019-3759:741
CARD	1886|AF322577.2|AF322577|betalactams|Class_B_betalactamases|IMP	@phgb|AF322577|2081-2822|ARO:3002238|IMP-47 [Klebsiella pneumoniae];@phgb|KP050486|0-741|ARO:3002238|IMP-47 [Serratia marcescens];@phgb|AF322577|2081-2822|ARO:3002199|IMP-8 [Klebsiella pneumoniae]
Lahey	1886|AF322577.2|AF322577|betalactams|Class_B_betalactamases|IMP	AJO16039.1 KP050486.1:1-741
NCBI	1886|AF322577.2|AF322577|betalactams|Class_B_betalactamases|IMP	gi|770533404|gb|KF745070.2|1195-1935 gi|556910018|gb|KF534724.1|1043-1783 gi|695225210|ref|NG_041240.1|3019-3759 gi|226426103|gb|EU855788.1|146585-147325 gi|226425792|gb|EU855787.1|146585-147325 gi|221327551|gb|FJ594416.1|183-923 gi|166092096|gb|EU368856.1|1-741 gi|154867189|gb|EU042136.1|86-826 gi|119698170|gb|EF127959.1|114-854 gi|110672139|gb|DQ845788.1|76-816
Resfinder	1886|AF322577.2|AF322577|betalactams|Class_B_betalactamases|IMP	blaIMP-8_1_EU042136
NCBI	gi|58200708|gb|AY874537.1|betalactams|Class_A_betalactamases|TEM	gi|58200708|gb|AY874537.1|1-1149 gi|479327147|gb|KC354802.1|11791-11985
CARD	CARD|phgb|L25634|1273-2158|ARO:3003562|TLE|betalactams|Class_A_betalactamases|TLE	@phgb|L25634|1273-2158|ARO:3003562|TLE beta-lactamase [Mycobacterium fortuitum]
NCBI	CARD|phgb|L25634|1273-2158|ARO:3003562|TLE|betalactams|Class_A_betalactamases|TLE	gi|497607|gb|L25634.1|MSGBLAF|1274-2158
NCBI	Sul|sul2_17_U57647|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|1477693|gb|U57647.1|PMU57647|1422-2237 gi|1477693|gb|U57647.1|PMU57647|127-266
Resfinder	Sul|sul2_17_U57647|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_17_U57647
CARD	CARD|phgb|DQ390458|3095-3995|ARO:3002609|aadA9|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|DQ390458|3095-3995|ARO:3002609|aadA9 [Corynebacterium sp. L2-79-05]
NCBI	CARD|phgb|DQ390458|3095-3995|ARO:3002609|aadA9|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|148717265|dbj|AB285088.1|925-25 gi|110588866|gb|DQ778995.1|943-43 gi|110588864|gb|DQ778994.1|943-43 gi|89513168|gb|DQ390458.1|3096-3996 gi|17059596|emb|AJ420072.1|27609-26709 gi|551485281|gb|KF525340.1|102-43
CARD	AGly|AF263519.1|gene4|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|EU118148|2006-2402|ARO:3002584|AAC(6')-29b [Pseudomonas aeruginosa]
NCBI	AGly|AF263519.1|gene4|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|925170806|gb|KR337988.1|2136-2531 gi|817630786|gb|CP011370.1|135205-135600 gi|817630786|gb|CP011370.1|136727-137122 gi|370318313|gb|JF414727.1|1995-2390 gi|317018011|gb|GU390402.1|1998-2393 gi|239702130|emb|FN397626.1|1824-2219 gi|239702124|emb|FN397625.1|1824-2219 gi|239702118|emb|FN397624.1|1817-2212 gi|239702112|emb|FN397622.1|1824-2219 gi|239702107|emb|FN397621.1|1824-2219 gi|239702101|emb|FN397620.1|1824-2219
ARG-ANNOT	Bla|OXA-12|U10251|181-975|795|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-12:U10251:181-975:795
CARD	Bla|OXA-12|U10251|181-975|795|betalactams|Class_D_betalactamases|OXA	@phgb|U10251|180-975|ARO:3001407|OXA-12 [Aeromonas sobria]
Lahey	Bla|OXA-12|U10251|181-975|795|betalactams|Class_D_betalactamases|OXA	AAA83417.1 U10251.1:181-975
NCBI	Bla|OXA-12|U10251|181-975|795|betalactams|Class_D_betalactamases|OXA	gi|606840|gb|U10251.1|181-975
Resfinder	Bla|OXA-12|U10251|181-975|795|betalactams|Class_D_betalactamases|OXA	blaOXA-12_1_U10251
NCBI	892|AJ746361.2|AJ746361|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|695211084|ref|NG_036020.1|2766-3605
Resfinder	892|AJ746361.2|AJ746361|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul1_29_AJ746361
NCBI	ACou|CP003583.1|gene1173|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|974999704|gb|CP013994.1|1612869-1610791 gi|529202214|gb|CP006620.1|1179647-1181725 gi|388532432|gb|CP003583.1|1130245-1132323 gi|378937014|gb|CP003351.1|1201986-1199908 gi|87299420|dbj|AB204590.1|1-342
ARG-ANNOT	Bla|OKP-B-17|AM850919|25-885|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-17:AM850919:25-885:861
CARD	Bla|OKP-B-17|AM850919|25-885|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM850919|24-885|ARO:3002450|OKP-B-17 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-17|AM850919|25-885|861|betalactams|Class_A_betalactamases|OKP	gi|197724710|emb|AM850919.2|25-885
Resfinder	Bla|OKP-B-17|AM850919|25-885|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-17_1_AM850919
NCBI	AGly|aadA1_5_JQ480156|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|975003027|gb|CP010829.1|4112979-4112191 gi|943457735|gb|KT818627.1|74232-73444 gi|943457735|gb|KT818627.1|135823-135035 gi|963329722|gb|KT316807.1|1252-2040 gi|963329696|gb|KT316806.1|1264-2052 gi|959195734|gb|CP013326.1|60115-59327 gi|959190351|gb|CP013324.1|109569-108781 gi|953271705|gb|KT175897.1|1251-2039 gi|953271701|gb|KT175896.1|1241-2029 gi|952545745|dbj|LC095818.1|2073-2861 gi|948288901|gb|KR259326.1|2016-2804
Resfinder	AGly|aadA1_5_JQ480156|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA1_5_JQ480156
CARD	CARD|pvgb|AB003428.1|151-2416|ARO:3003702|Pseudomonas|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	@pvgb|AB003428.1|151-2416|ARO:3003702|Pseudomonas aeruginosa parC conferring resistance to fluoroquinolone [Pseudomonas aeruginosa]
NCBI	CARD|pvgb|AB003428.1|151-2416|ARO:3003702|Pseudomonas|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|4176378|dbj|AB003428.1|152-2416
ARG-ANNOT	Gly|VanT|AF162694|3008-5104|2097|Glycopeptides|VanC-type_resistance_protein|VANTC	(Gly)VanT:AF162694:3008-5104:2097
CARD	Gly|VanT|AF162694|3008-5104|2097|Glycopeptides|VanC-type_resistance_protein|VANTC	@phgb|AF162694|3007-5104|ARO:3002970|vanTC [Enterococcus gallinarum];@phgb|AF162694|3007-5104|ARO:3000372|vanT [Enterococcus gallinarum]
NCBI	Gly|VanT|AF162694|3008-5104|2097|Glycopeptides|VanC-type_resistance_protein|VANTC	gi|9294728|gb|AF162694.1|AF162694|3008-5104
Resfinder	Gly|VanT|AF162694|3008-5104|2097|Glycopeptides|VanC-type_resistance_protein|VANTC	VanT-C_1_AF162694
ARG-ANNOT	Bla|CMY-80|JQ733577|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-80:JQ733577:1027-2172:1146
CARD	Bla|CMY-80|JQ733577|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ733577|1026-2172|ARO:3002093|CMY-80 [Citrobacter freundii]
Lahey	Bla|CMY-80|JQ733577|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	AFK73449.1 JQ733577.1:1027-2172
NCBI	Bla|CMY-80|JQ733577|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	gi|388564851|gb|JQ733577.1|1027-2172
Resfinder	Bla|CMY-80|JQ733577|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-80_1_JQ733577
NCBI	Bla|AF336098.1|gene1|betalactams|Mutant_porin_proteins|OMP36|RequiresSNPConfirmation	gi|13384122|gb|AF336098.1|1-1128
CARD	CARD|phgb|AB894482|35038-35500|ARO:3003199|AAC6-PRIME-Iak|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AB894482|35038-35500|ARO:3003199|AAC(6')-Iak [Stenotrophomonas maltophilia]
NCBI	CARD|phgb|AB894482|35038-35500|ARO:3003199|AAC6-PRIME-Iak|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|565411179|dbj|AB894482.1|35039-35500 gi|558607662|dbj|AB871480.1|470-9
CARD	CARD|phgb|JX514368|271-1417|ARO:3002107|CMY-94|betalactams|Class_C_betalactamases|CMY	@phgb|JX514368|271-1417|ARO:3002107|CMY-94 [Escherichia coli]
NCBI	CARD|phgb|JX514368|271-1417|ARO:3002107|CMY-94|betalactams|Class_C_betalactamases|CMY	gi|442540408|gb|JX514368.1|272-1418
NCBI	Rif|AE016830.1|gene3155|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|29350190|gb|AE016830.1|3112405-3108782
CARD	740|JX560992.1|JX560992|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT9	@phgb|JX560992|8592-9321|ARO:3002630|ANT(9)-Ia [Staphylococcus aureus]
NCBI	740|JX560992.1|JX560992|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT9	gi|927820524|gb|KT448822.1|6613-5885 gi|927820498|gb|KT448821.1|18094-17366 gi|927820473|gb|KT448820.1|18095-17367 gi|927820447|gb|KT448819.1|18096-17368 gi|927820421|gb|KT448818.1|18096-17368 gi|927820398|gb|KT448817.1|18094-17366 gi|908777994|gb|KR936172.1|18094-17366 gi|829569887|gb|KJ797025.1|22653-21925 gi|770542082|gb|KP339868.1|3990-4718 gi|749389159|gb|KJ645709.1|33580-34308
ARG-ANNOT	gi|6273433|emb|Y14574.2|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-17:Y14574:1-861:861
CARD	gi|6273433|emb|Y14574.2|betalactams|Class_A_betalactamases|TEM	@phgb|Y14574|0-861|ARO:3000888|TEM-17 [Capnocytophaga ochracea]
Lahey	gi|6273433|emb|Y14574.2|betalactams|Class_A_betalactamases|TEM	CAA74912.2 Y14574.2:1-861
NCBI	gi|6273433|emb|Y14574.2|betalactams|Class_A_betalactamases|TEM	gi|6273433|emb|Y14574.2|1-861
Resfinder	gi|6273433|emb|Y14574.2|betalactams|Class_A_betalactamases|TEM	blaTEM-17_1_Y14574
NCBI	Sul|sul2_8_AJ877041|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|66840966|emb|AJ877041.1|146-997 gi|975007785|gb|CP010832.1|3652-3615 gi|954666075|gb|KT962845.1|18735-18698 gi|971339514|gb|CP006662.2|54069-54032 gi|943457735|gb|KT818627.1|109771-109734
Resfinder	Sul|sul2_8_AJ877041|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_8_AJ877041
ARG-ANNOT	Bla|B-9|AY348324|1-747|747|betalactams|Class_B_betalactamases|BLAB	(Bla)B-9:AY348324:1-747:747
NCBI	Bla|B-9|AY348324|1-747|747|betalactams|Class_B_betalactamases|BLAB	gi|33772767|gb|AY348324.1|1-746
Resfinder	Bla|B-9|AY348324|1-747|747|betalactams|Class_B_betalactamases|BLAB	blaB-9_1_AY348324
ARG-ANNOT	721|AB014481.1|AB014481|MLS|23S_rRNA_methyltransferases|ERMB	(MLS)ErmY:AB014481:556-1290:735
CARD	721|AB014481.1|AB014481|MLS|23S_rRNA_methyltransferases|ERMB	@phgb|AB014481|0-735|ARO:3002825|ErmY [Staphylococcus aureus]
NCBI	721|AB014481.1|AB014481|MLS|23S_rRNA_methyltransferases|ERMB	gi|57207863|dbj|AB092817.1|8880-9614 gi|57157628|dbj|AB179623.1|20160-19426 gi|12081901|dbj|AB014481.1|556-1290
Resfinder	721|AB014481.1|AB014481|MLS|23S_rRNA_methyltransferases|ERMB	erm(Y)_1_AB014481
CARD	Flq|QnrB57_1_JX259318|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JX259318|0-681|ARO:3002770|QnrB57 [Citrobacter freundii]
NCBI	Flq|QnrB57_1_JX259318|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|805300635|gb|KP339260.1|127-807 gi|403495125|gb|JX259318.1|1-681
Resfinder	Flq|QnrB57_1_JX259318|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB57_1_JX259318
ARG-ANNOT	gi|11095253|gb|AF275256.1|betalactams|Class_A_betalactamases|SME	(Bla)SME-2:AF275256:1-885:885
CARD	gi|11095253|gb|AF275256.1|betalactams|Class_A_betalactamases|SME	@phgb|AF275256|0-885|ARO:3002380|SME-2 [Serratia marcescens]
Lahey	gi|11095253|gb|AF275256.1|betalactams|Class_A_betalactamases|SME	AAG29813.1 AF275256.1:1-885
NCBI	gi|11095253|gb|AF275256.1|betalactams|Class_A_betalactamases|SME	gi|554888868|gb|KF445086.1|20697-19813 gi|554888828|gb|KF318367.1|20697-19813 gi|469615191|gb|KC352682.1|8516-9400 gi|11095253|gb|AF275256.1|AF275256|1-885 gi|510203|emb|Z30237.1|95-1
Resfinder	gi|11095253|gb|AF275256.1|betalactams|Class_A_betalactamases|SME	blaSME-2_1_AF275256
ARG-ANNOT	MLS|Erm30|AF079138|1283-2293|1011|MLS|23S_rRNA_methyltransferases|ERM30	(MLS)Erm30:AF079138:1283-2293:1011
NCBI	MLS|Erm30|AF079138|1283-2293|1011|MLS|23S_rRNA_methyltransferases|ERM30	gi|952467264|gb|CP013129.1|5625461-5626471 gi|932864506|emb|LN881739.1|3437831-3436821 gi|3808326|gb|AF079138.1|AF079138|2293-1283
ARG-ANNOT	Gly|VanY-Pt|AY926880.2|5831-6721|891|Glycopeptides|VanA-type_accessory_protein|VANYA	(Gly)VanY-Pt:AY926880.2|:5831-6721:891
NCBI	Gly|VanY-Pt|AY926880.2|5831-6721|891|Glycopeptides|VanA-type_accessory_protein|VANYA	gi|257412320|gb|AY926880.2|5831-6721
Resfinder	Gly|VanY-Pt|AY926880.2|5831-6721|891|Glycopeptides|VanA-type_accessory_protein|VANYA	VanY-Pt2_4_AY926880
NCBI	Bla|OXA-21_2_DQ993182|betalactams|Class_D_betalactamases|OXA	gi|685424881|gb|KM009138.1|1200-2027 gi|635661971|gb|KJ569108.1|721-1548 gi|116248472|gb|DQ993182.1|1190-2017
Resfinder	Bla|OXA-21_2_DQ993182|betalactams|Class_D_betalactamases|OXA	blaOXA-21_2_DQ993182
ARG-ANNOT	Bla|MECA|AB221124|91-2097|2007|betalactams|Penicillin_binding_protein|MECA	(Bla)MECA:AB221124:91-2097:2007
NCBI	Bla|MECA|AB221124|91-2097|2007|betalactams|Penicillin_binding_protein|MECA	gi|985566378|dbj|LC068959.1|25787-23781 gi|985563902|dbj|AB721404.1|38937-36931 gi|984671414|emb|LT009690.1|43294-41288 gi|974697948|dbj|AP017320.1|46037-44031 gi|941146344|gb|CP007676.1|41583-39577 gi|941142962|gb|CP007672.1|41751-39745 gi|941139768|gb|CP007657.1|41750-39744 gi|937132516|gb|KT316803.1|6369-4363 gi|908230075|gb|CP009676.1|46291-44285 gi|899756207|gb|CP012119.1|1884670-1886676
NCBI	Sul|sul1_27_GU562437|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695223897|ref|NG_040952.1|6926-7765 gi|695220981|ref|NG_039598.1|6926-7765
Resfinder	Sul|sul1_27_GU562437|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_27_GU562437
NCBI	Phe|NC_010588.1.6276004|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|985700753|dbj|LC122351.1|1649-2319 gi|973776294|gb|KT833851.1|162657-163327 gi|973743057|gb|KT894021.1|4129-3459 gi|974004808|dbj|LC030201.1|1364-2034 gi|974004804|dbj|LC030200.1|1364-2034 gi|971497742|gb|CP012903.1|56765-57435 gi|970697631|gb|KT935446.1|80626-81296 gi|937637950|gb|KT203286.1|5910-5240 gi|941350020|gb|KT163018.1|10773-10103 gi|941350015|gb|KT163017.1|4081-3411
NCBI	1737|AY033516.1|AY033516|betalactams|Class_A_betalactamases|CTX	gi|16506517|gb|AY033516.1|3791-4714 gi|695208600|ref|NG_035613.1|1712-2635 gi|961666360|gb|KT185451.1|96494-96265 gi|817046807|gb|KP893385.1|135986-135757
NCBI	gi|88697140|gb|DQ392963.1|betalactams|Class_D_betalactamases|OXA	gi|88697140|gb|DQ392963.1|1-865
NCBI	Sul|AL009126.3|gene92|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|983204966|gb|CP014166.1|85736-86593 gi|807072327|gb|CP011115.1|85736-86593 gi|758179040|gb|CP010014.1|3934420-3935277 gi|749183975|gb|CP010314.1|85737-86594 gi|728887195|gb|CP010053.1|85736-86593 gi|728882887|gb|CP010052.1|85737-86594 gi|724425628|emb|LN680001.1|85736-86593 gi|723796434|emb|LN649259.1|85736-86593 gi|649013680|gb|CP008698.1|85737-86594 gi|649009321|gb|CP007800.1|85737-86594
NCBI	AGly|strA_3_AF024602|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|3220157|gb|AF024602.1|AF024602|2353-3156 gi|984686374|gb|HQ700358.2|20307-19505 gi|974751547|gb|KU130294.1|219608-218806 gi|971493847|gb|CP010351.1|33456-34258 gi|873464424|gb|KR014106.1|34318-35120 gi|954171462|gb|KT151662.1|77778-78580 gi|954171374|gb|KT151661.1|77778-78580 gi|954171188|gb|KT151659.1|77742-78544 gi|954171094|gb|KT151658.1|77750-78552 gi|954171002|gb|KT151657.1|77778-78580
Resfinder	AGly|strA_3_AF024602|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	strA_3_AF024602
CARD	CARD|phgb|EF468463|66-927|ARO:3001028|TEM-162|betalactams|Class_A_betalactamases|TEM	@phgb|EF468463|66-927|ARO:3001028|TEM-162 [Acinetobacter haemolyticus]
NCBI	CARD|phgb|EF468463|66-927|ARO:3001028|TEM-162|betalactams|Class_A_betalactamases|TEM	gi|134154076|gb|EF468463.1|67-928
CARD	CARD|phgb|DQ212986|4222-5062|ARO:3002959|vanYG1|Glycopeptides|VanG-type_accessory_protein|VANYG	@phgb|DQ212986|4222-5062|ARO:3002959|vanYG1 [Enterococcus faecalis]
NCBI	CARD|phgb|DQ212986|4222-5062|ARO:3002959|vanYG1|Glycopeptides|VanG-type_accessory_protein|VANYG	gi|762041216|gb|KF697366.1|36933-37773 gi|672937785|gb|KF686317.1|36933-37773 gi|674114364|gb|CP007573.1|762787-763627 gi|674107077|gb|CP007570.1|641043-641883 gi|77380191|gb|DQ212986.1|4223-5063
NCBI	Bla|AJ550807.1|gene4|betalactams|Class_B_betalactamases|IMP	gi|354549225|gb|JN091097.1|261-1136 gi|281021955|gb|GU207399.1|66-941 gi|219664352|gb|FJ172676.1|869-1744 gi|164663647|emb|AM931299.1|32-907 gi|72416444|emb|AJ628135.2|2228-3103 gi|33086392|emb|AJ550807.1|2243-3118 gi|401668650|gb|JX131371.1|724-1597 gi|219664342|gb|FJ172674.1|168-1041
CARD	gi|675599421|gb|KJ934266.1|betalactams|Class_A_betalactamases|CARB	@phgb|KJ934266|0-852|ARO:3003174|CARB-18 [Vibrio parahaemolyticus]
Lahey	gi|675599421|gb|KJ934266.1|betalactams|Class_A_betalactamases|CARB	AIL92327.1 KJ934266.1:1-852
NCBI	gi|675599421|gb|KJ934266.1|betalactams|Class_A_betalactamases|CARB	gi|675599421|gb|KJ934266.1|1-852
CARD	CARD|phgb|AP009048|3980025-3981183|ARO:3000795|mdtE|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTE	@phgb|AP009048|3980025-3981183|ARO:3000795|mdtE [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|AP009048|3980025-3981183|ARO:3000795|mdtE|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTE	gi|985000614|gb|CP014225.1|1857589-1856431 gi|958627747|gb|CP013253.1|4342348-4343506 gi|958612453|gb|CP013048.1|594559-595717 gi|939732440|gb|CP011343.2|3637355-3636197 gi|939731527|gb|CP011342.2|3637803-3636645 gi|937526251|gb|CP012870.1|981266-982424 gi|937521852|gb|CP012869.1|981266-982424 gi|937517453|gb|CP012868.1|981266-982424 gi|932857508|emb|LN877770.1|4483891-4482733 gi|923416119|gb|CP011113.1|3617116-3615958
NCBI	Bla|SHV-71_1_EF373974|betalactams|Class_A_betalactamases|SHV	gi|125658591|gb|EF373974.1|1-861
Resfinder	Bla|SHV-71_1_EF373974|betalactams|Class_A_betalactamases|SHV	blaSHV-71_1_EF373974
NCBI	1268|AB976602.1|AB976602|betalactams|Class_A_betalactamases|CTX	gi|971520884|gb|CP008697.1|324162-323220 gi|971520884|gb|CP008697.1|496713-495771 gi|967512282|gb|KT362307.1|1109-167 gi|962148759|gb|KT002541.1|12269-13211 gi|961666360|gb|KT185451.1|26745-25803 gi|961666360|gb|KT185451.1|96539-96265 gi|961494526|gb|KT282968.1|36768-35826 gi|940516925|dbj|LC091535.1|1404-2346 gi|918462945|gb|KP987215.1|31784-30842 gi|817046807|gb|KP893385.1|73718-74660 gi|817046807|gb|KP893385.1|136031-135757 gi|831358012|emb|LN735561.1|25778-24836 gi|831357893|emb|LN735560.1|15374-14432
CARD	gi|723266034|gb|KM379100.1|betalactams|Class_A_betalactamases|KPC	@phgb|KM379100|0-882|ARO:3003180|KPC-22 [Klebsiella pneumoniae]
Lahey	gi|723266034|gb|KM379100.1|betalactams|Class_A_betalactamases|KPC	AIX87991.1 KM379100.1:1-882
NCBI	gi|723266034|gb|KM379100.1|betalactams|Class_A_betalactamases|KPC	gi|723266034|gb|KM379100.1|1-882
NCBI	gi|56554762|gb|AY847143.1|betalactams|Class_A_betalactamases|CTX	gi|56554762|gb|AY847143.1|83-963
CARD	CARD|pvgb|AL450380|296695-297550|ARO:3003389|Mycobacterium|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	@pvgb|AL450380|296695-297550|ARO:3003389|Mycobacterium leprae dapsone resistant folP mutants [Mycobacterium leprae TN]
NCBI	CARD|pvgb|AL450380|296695-297550|ARO:3003389|Mycobacterium|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|219932450|emb|FM211192.1|296711-297566 gi|13092412|emb|AL583917.1|296696-297551 gi|3097216|emb|AL023093.1|5342-4487 gi|5832712|dbj|AB028656.1|1-855
NCBI	Bla|OXY1-7|M27459|86-961|876|betalactams|Class_A_betalactamases|OXY	gi|662706586|gb|CP008841.1|2548225-2547350 gi|660567586|gb|CP008788.1|1536015-1535140 gi|341705|gb|M27459.1|KPNLACMASB|86-961 gi|219920904|emb|FM178414.1|1-825
Resfinder	Bla|OXY1-7|M27459|86-961|876|betalactams|Class_A_betalactamases|OXY	blaOXY-1-7_7_M27459
NCBI	Tet|tetA_P_1_AB054980|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|16904629|dbj|AB054980.1|1-1263
Resfinder	Tet|tetA_P_1_AB054980|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tetA(P)_1_AB054980
CARD	gi|13173097|gb|AF324834.1|betalactams|Class_A_betalactamases|VEB	@phgb|AF324834.1|0-900|ARO:3003712|VEB-1b [Pseudomonas aeruginosa]
Lahey	gi|13173097|gb|AF324834.1|betalactams|Class_A_betalactamases|VEB	ALB25887.1 KR021286.1:1-900
NCBI	gi|13173097|gb|AF324834.1|betalactams|Class_A_betalactamases|VEB	gi|13173097|gb|AF324834.1|1-900
Resfinder	gi|13173097|gb|AF324834.1|betalactams|Class_A_betalactamases|VEB	blaVEB-1_4_AF324834
CARD	CARD|phgb|U00096|2154015-2155263|ARO:3000792|mdtA|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTA	@phgb|U00096|2154015-2155263|ARO:3000792|mdtA [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|2154015-2155263|ARO:3000792|mdtA|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTA	gi|985000614|gb|CP014225.1|351215-352463 gi|958627747|gb|CP013253.1|1262254-1261006 gi|939732440|gb|CP011343.2|2134173-2135421 gi|939731527|gb|CP011342.2|2134869-2136117 gi|937526251|gb|CP012870.1|2487638-2486390 gi|937521852|gb|CP012869.1|2487638-2486390 gi|937517453|gb|CP012868.1|2487638-2486390 gi|932857508|emb|LN877770.1|2518050-2519298 gi|923416119|gb|CP011113.1|2116878-2118126 gi|899729770|gb|CP012127.1|2135207-2136455
CARD	CARD|phgb|JF780936|63-1209|ARO:3002078|CMY-65|betalactams|Class_C_betalactamases|CMY	@phgb|JF780936|63-1209|ARO:3002078|CMY-65 [Citrobacter sp. 913]
NCBI	CARD|phgb|JF780936|63-1209|ARO:3002078|CMY-65|betalactams|Class_C_betalactamases|CMY	gi|336318752|gb|JF780936.1|64-1210
ARG-ANNOT	gi|223635894|emb|AM941846.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-100:AM922306:1-900:900
CARD	gi|223635894|emb|AM941846.1|betalactams|Class_A_betalactamases|SHV	@phgb|AM941846|0-900|ARO:3001338|SHV-100 [Klebsiella pneumoniae]
Lahey	gi|223635894|emb|AM941846.1|betalactams|Class_A_betalactamases|SHV	CAQ03505.1 AM941846.1:1-900
NCBI	gi|223635894|emb|AM941846.1|betalactams|Class_A_betalactamases|SHV	gi|218091984|emb|AM922306.1|1-900 gi|218091984|emb|AM922306.1|93-133 gi|218091984|emb|AM922306.1|132-172 gi|257043769|gb|GQ407126.1|92-861 gi|975895720|gb|CP014004.1|1087707-1088475 gi|975895720|gb|CP014004.1|1087615-1087747 gi|960865004|gb|CP012043.1|2753297-2752529 gi|960865004|gb|CP012043.1|2753389-2753257 gi|695172424|gb|CP008929.1|4247653-4246885 gi|695172424|gb|CP008929.1|4247745-4247613 gi|695220756|ref|NG_039549.1|169-937 gi|124053916|gb|EF035564.1|93-861 gi|23194361|gb|AF538324.1|93-861 gi|23194361|gb|AF538324.1|1-133 gi|83272142|gb|DQ298520.1|114-882 gi|83272142|gb|DQ298520.1|22-154 gi|937292495|gb|CP012753.1|1078475-1078607
Resfinder	gi|223635894|emb|AM941846.1|betalactams|Class_A_betalactamases|SHV	blaSHV-100_1_AM941846
ARG-ANNOT	Bla|GES-11|JN253503|37-900|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-11:JN253503:37-900:864
CARD	Bla|GES-11|JN253503|37-900|864|betalactams|Class_A_betalactamases|GES	@phgb|FJ854362|701-1565|ARO:3002340|GES-11 [Acinetobacter baumannii]
Lahey	Bla|GES-11|JN253503|37-900|864|betalactams|Class_A_betalactamases|GES	ACS44714.1 FJ854362.1:702-1565
NCBI	Bla|GES-11|JN253503|37-900|864|betalactams|Class_A_betalactamases|GES	gi|974137695|dbj|LC107606.1|58-921 gi|970567970|dbj|LC107423.1|671-1534 gi|787862679|gb|CP008707.1|31686-30823 gi|478437738|gb|KC469284.1|26-889 gi|345645209|gb|JN253503.1|37-900 gi|310769856|gb|HM622144.1|55-918 gi|240114397|gb|FJ854362.1|702-1565 gi|238058428|gb|FJ538287.1|1-864
Resfinder	Bla|GES-11|JN253503|37-900|864|betalactams|Class_A_betalactamases|GES	blaGES-11_1_FJ854362
ARG-ANNOT	Bla|CTX-M-65|EF418608|10-885|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-65:EF418608:10-885:876
CARD	Bla|CTX-M-65|EF418608|10-885|876|betalactams|Class_A_betalactamases|CTX	@phgb|EF418608|9-885|ARO:3001926|CTX-M-65 [Escherichia coli]
Lahey	Bla|CTX-M-65|EF418608|10-885|876|betalactams|Class_A_betalactamases|CTX	ABN69105.1 EF418608.1:10-885
NCBI	Bla|CTX-M-65|EF418608|10-885|876|betalactams|Class_A_betalactamases|CTX	gi|961666360|gb|KT185451.1|27655-26780 gi|961494526|gb|KT282968.1|37678-36803 gi|817046807|gb|KP893385.1|72808-73683 gi|831358012|emb|LN735561.1|26688-25813 gi|831357893|emb|LN735560.1|16284-15409 gi|831357773|emb|LN735559.1|24625-23750 gi|831357650|emb|LN735558.1|25865-24990 gi|822874980|gb|KR078259.1|5672-6547 gi|667013121|gb|KJ668702.2|1676-2551 gi|548828260|gb|KF537631.1|6177-7052
Resfinder	Bla|CTX-M-65|EF418608|10-885|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-65_2_GQ456158
CARD	CARD|phgb|KP347127|22412-24038|ARO:3003689|MCR-1|Lipopeptides|Colistin_phosphoethanolamine_transferase|MCR	@phgb|KP347127|22412-24038|ARO:3003689|MCR-1 [Escherichia coli]
NCBI	CARD|phgb|KP347127|22412-24038|ARO:3003689|MCR-1|Lipopeptides|Colistin_phosphoethanolamine_transferase|MCR	gi|982277578|dbj|LC114018.1|1-1626 gi|982277574|dbj|LC114017.1|1-1626 gi|817091864|gb|KP347127.1|22413-24038
ARG-ANNOT	49|AJ514254.1|AJ514254|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET36	(Tet)Tet-36:AJ514254:2534-4456:1923
CARD	49|AJ514254.1|AJ514254|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET36	@phgb|AJ514254|0-1923|ARO:3000197|tet36 [Bacteroides coprosuis DSM 18011]
NCBI	49|AJ514254.1|AJ514254|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET36	gi|32451207|emb|AJ514254.1|2534-4456
Resfinder	49|AJ514254.1|AJ514254|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET36	tet(36)_1_AJ514254
CARD	CARD|phgb|AF174129|6335-7211|ARO:3001872|CTX-M-9|betalactams|Class_A_betalactamases|CTX	@phgb|AF174129|6335-7211|ARO:3001872|CTX-M-9 [Escherichia coli]
NCBI	CARD|phgb|AF174129|6335-7211|ARO:3001872|CTX-M-9|betalactams|Class_A_betalactamases|CTX	gi|825088700|gb|KP975077.1|39408-38532 gi|516560780|gb|JX515588.1|200604-199728 gi|299483205|gb|HM569735.1|1115-1991 gi|695200454|ref|NG_036140.1|5317-6193 gi|695208190|ref|NG_035493.1|6336-7212 gi|695200140|ref|NG_035386.1|1-877 gi|71273537|emb|AM040708.1|5582-6458 gi|130918109|gb|EF441350.1|132-1007 gi|16304825|emb|AJ416345.1|132-1005
CARD	1570|LC031883.1|LC031883|betalactams|Class_B_betalactamases|IMP	@phgb|LC031883|5071-5812|ARO:3003659|IMP-51 [Pseudomonas aeruginosa]
Lahey	1570|LC031883.1|LC031883|betalactams|Class_B_betalactamases|IMP	BAQ56016.1 LC031883.1:5072-5812
NCBI	1570|LC031883.1|LC031883|betalactams|Class_B_betalactamases|IMP	gi|765098769|dbj|LC031883.1|5072-5812
ARG-ANNOT	gi|10180985|gb|AY007369.1|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-5:AY007369:1-1149:1149
CARD	gi|10180985|gb|AY007369.1|betalactams|Class_C_betalactamases|FOX	@phgb|AY007369|0-1149|ARO:3002159|FOX-5 [Klebsiella pneumoniae]
Lahey	gi|10180985|gb|AY007369.1|betalactams|Class_C_betalactamases|FOX	AAG12974.1 AY007369.1:1-1149
NCBI	gi|10180985|gb|AY007369.1|betalactams|Class_C_betalactamases|FOX	gi|800908878|gb|KP345882.1|200394-199246 gi|723243434|gb|CP009868.1|50728-49580 gi|662716651|gb|CP008824.1|26723-27871 gi|660573358|gb|CP008790.1|26723-27871 gi|640855459|gb|CP007732.1|26723-27871 gi|619739382|gb|CP007558.1|26723-27871 gi|94502874|gb|DQ478715.1|2386-3534 gi|695199915|ref|NG_035332.1|1-1149
Resfinder	gi|10180985|gb|AY007369.1|betalactams|Class_C_betalactamases|FOX	blaFOX-5_1_AY007369
ARG-ANNOT	AGly|Aac3-IId|EU022314|1-861|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-IId:EU022314:1-861:861
NCBI	AGly|Aac3-IId|EU022314|1-861|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|154184309|gb|EU022314.1|1-861
Resfinder	AGly|Aac3-IId|EU022314|1-861|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	aac(3)-IId_1_EU022314
ARG-ANNOT	267|Z12001.1|Z12001|Phenicol|Phenicol_efflux_pumps|CMRA	(Phe)CmrA:Z12001:993-2168:1176
CARD	267|Z12001.1|Z12001|Phenicol|Phenicol_efflux_pumps|CMRA	@phgb|Z12001|992-2168|ARO:3002701|cmr [Rhodococcus fascians]
NCBI	267|Z12001.1|Z12001|Phenicol|Phenicol_efflux_pumps|CMRA	gi|46157|emb|Z12001.1|993-2168
Resfinder	267|Z12001.1|Z12001|Phenicol|Phenicol_efflux_pumps|CMRA	cmrA_1_Z12001
ARG-ANNOT	Bla|TEM-191|JF949916|1-757|757|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-191:JF949916:1-757:757
CARD	Bla|TEM-191|JF949916|1-757|757|betalactams|Class_A_betalactamases|TEM	@phgb|JF949916|0-757|ARO:3001051|TEM-191 [Escherichia coli]
NCBI	Bla|TEM-191|JF949916|1-757|757|betalactams|Class_A_betalactamases|TEM	gi|351735910|gb|JF949916.1|1-757
Lahey	Bla|CARB-2_1_M69058|betalactams|Class_A_betalactamases|CARB	AAA25740.1 M69058.1:98-1012
NCBI	Bla|CARB-2_1_M69058|betalactams|Class_A_betalactamases|CARB	gi|829496271|gb|KP420006.1|1311-2225 gi|815968487|gb|CP011317.1|5587344-5588258 gi|800908878|gb|KP345882.1|99060-98146 gi|777182157|emb|LN829403.1|70598-71512 gi|766547679|gb|KP116299.1|40771-41685 gi|742994109|gb|CP010391.1|50800-49886 gi|704485843|gb|KJ186153.1|37274-38188 gi|686483924|gb|KM111262.1|119-1033 gi|675294670|dbj|AB985401.1|975-1889 gi|660573358|gb|CP008790.1|139065-139979
Resfinder	Bla|CARB-2_1_M69058|betalactams|Class_A_betalactamases|CARB	blaCARB-2_1_M69058
NCBI	ACou|CP001138.1|gene3336|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|807109228|gb|CP011259.1|300881-298989 gi|563346448|gb|CP006876.1|3233088-3231196 gi|197211055|gb|CP001138.1|3267466-3265574
ARG-ANNOT	Rif|Arr2|JQ639792|1050-1502|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	(Rif)Arr2:JQ639792:1050-1502:453
CARD	Rif|Arr2|JQ639792|1050-1502|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	@phgb|AF078527|4387-4840|ARO:3002847|arr-2 [Pseudomonas aeruginosa]
NCBI	Rif|Arr2|JQ639792|1050-1502|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|971497538|gb|CP012902.1|80069-79617 gi|969995310|gb|KT317086.1|971-1423 gi|969995276|gb|KT317085.1|13080-13532 gi|958102843|emb|LN824133.1|2810944-2811396 gi|930425908|gb|KR067585.1|109-561 gi|925170817|gb|KR337990.1|2603-3055 gi|884906146|gb|CP012007.1|94793-94341 gi|823682865|emb|LN831184.1|250675-250223 gi|822476033|dbj|LC055503.1|101042-101494 gi|746616805|gb|KJ187752.1|73330-73782
Resfinder	Rif|Arr2|JQ639792|1050-1502|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	ARR-2_1_HQ141279
ARG-ANNOT	Bla|TEM-97|AF397066|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-97:AF397066:1-861:861;(Bla)TEM-99:AF397066:1-861:861
Lahey	Bla|TEM-97|AF397066|1-861|861|betalactams|Class_A_betalactamases|TEM	AAK85243.1 AF397066.1:1-861
NCBI	Bla|TEM-97|AF397066|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|15149325|gb|AF397066.1|AF397066|1-861
Resfinder	Bla|TEM-97|AF397066|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-99_1_AF397066
ARG-ANNOT	Bla|VIM-6|AY165025|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-6:AY165025:1-801:801
CARD	Bla|VIM-6|AY165025|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|AY165025|0-801|ARO:3002276|VIM-6 [Pseudomonas putida]
Lahey	Bla|VIM-6|AY165025|1-801|801|betalactams|Class_B_betalactamases|VIM	AAN84550.1 AY165025.1:1-801
NCBI	Bla|VIM-6|AY165025|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|925170830|gb|KR337993.1|115-915 gi|825088620|gb|KP975076.1|26784-25984 gi|222446218|emb|FM994936.1|972-1772 gi|152143890|gb|EF645347.1|1-801 gi|145321079|gb|EF522838.1|1057-1857 gi|26892103|gb|AY165025.1|1-801
Resfinder	Bla|VIM-6|AY165025|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-6_1_AY165025
ARG-ANNOT	1923|HQ185697.1|HQ185697|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-58:HQ185697:1268-2413:1146
CARD	1923|HQ185697.1|HQ185697|betalactams|Class_C_betalactamases|CMY	@phgb|HQ185697|1267-2413|ARO:3002072|CMY-58 [Escherichia coli]
Lahey	1923|HQ185697.1|HQ185697|betalactams|Class_C_betalactamases|CMY	ADY19254.1 HQ185697.1:1268-2413
NCBI	1923|HQ185697.1|HQ185697|betalactams|Class_C_betalactamases|CMY	gi|695224888|ref|NG_041181.1|1268-2413
Resfinder	1923|HQ185697.1|HQ185697|betalactams|Class_C_betalactamases|CMY	blaCMY-58_1_HQ185697
ARG-ANNOT	Gly|VanS-Pt2|DQ018710|3721-4881|1161|Glycopeptides|VanA-type_regulator|VANSA	(Gly)VanS-Pt2:DQ018710:3721-4881:1161
NCBI	Gly|VanS-Pt2|DQ018710|3721-4881|1161|Glycopeptides|VanA-type_regulator|VANSA	gi|66731632|gb|DQ018710.1|3721-4881
Resfinder	Gly|VanS-Pt2|DQ018710|3721-4881|1161|Glycopeptides|VanA-type_regulator|VANSA	VanS-Pt_3_DQ018710
NCBI	Sul|CP000768.1|gene1044|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|152938384|gb|CP000768.1|958384-957242
NCBI	Gly|VanH-D_1_AB242319|Glycopeptides|VanD-type_resistance_protein|VANHD	gi|109240378|dbj|AB242319.1|3045-4016 gi|54114872|dbj|AB183866.1|1-79
Resfinder	Gly|VanH-D_1_AB242319|Glycopeptides|VanD-type_resistance_protein|VANHD	VanH-D_1_AB242319
NCBI	MLS|lsaA_3_AY737526|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	gi|56792345|gb|AY737526.1|312-1808
Resfinder	MLS|lsaA_3_AY737526|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	lsa(A)_3_AY737526
ARG-ANNOT	Bla|TEM-190|JN416112|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-190:JN416112:1-861:861
CARD	Bla|TEM-190|JN416112|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|JN416112|0-861|ARO:3001050|TEM-190 [Escherichia coli]
Lahey	Bla|TEM-190|JN416112|1-861|861|betalactams|Class_A_betalactamases|TEM	AEL88240.1 JN416112.1:1-861
NCBI	Bla|TEM-190|JN416112|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|343114808|gb|JN416112.1|1-861
Resfinder	Bla|TEM-190|JN416112|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-190_1_JN416112
NCBI	736|JX560992.1|JX560992|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|695227123|ref|NG_041616.1|3848-5323 gi|222121345|dbj|AP009486.1|44169-45644 gi|974700633|dbj|AP017321.1|1566-2997 gi|937637449|gb|KT601170.1|53744-52313 gi|908234448|gb|CP010309.1|342355-340924 gi|841330217|emb|LN866849.1|1591032-1592463 gi|822490352|gb|CP003939.1|1724076-1722645 gi|807232188|gb|CP011116.1|1632281-1630850 gi|756766642|gb|KJ922127.1|19639-18208 gi|748807120|gb|CP010526.1|59777-61208
CARD	Phe|AF252855.1|gene1|Phenicol|Phenicol_efflux_pumps|FLOR	@phgb|AF252855|66-1281|ARO:3002705|floR [Escherichia coli]
NCBI	Phe|AF252855.1|gene1|Phenicol|Phenicol_efflux_pumps|FLOR	gi|56607128|gb|AY775258.1|534-1748 gi|10697322|gb|AF252855.1|AF252855|67-1281
NCBI	ACou|NC_007793.3913375|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|974161314|gb|CP012018.1|1461272-1463269 gi|974158397|gb|CP012015.1|1462004-1464001 gi|974155539|gb|CP012013.1|1462916-1464913 gi|974152716|gb|CP012012.1|1454796-1456793 gi|974149849|gb|CP012011.1|1510750-1512747 gi|941146344|gb|CP007676.1|1356392-1358389 gi|941142962|gb|CP007672.1|1354606-1356603 gi|941139768|gb|CP007657.1|1368324-1370321 gi|899756207|gb|CP012119.1|537344-535347 gi|899750970|gb|CP012120.1|2435918-2433921
CARD	Rif|NC_002695.1.914942|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	@pvgb|NC_002695|4990140-4994169|ARO:3003288|Escherichia coli rpoB mutants conferring resistance to rifampicin [Escherichia coli O157:H7 str. Sakai]
NCBI	Rif|NC_002695.1.914942|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|937297913|gb|CP012802.1|4862520-4866548 gi|667689599|gb|CP008957.1|5077767-5081795 gi|386794017|gb|CP001925.1|4916880-4920908 gi|374356928|gb|CP003109.1|4786110-4790138 gi|290760697|gb|CP001846.1|4877781-4881809 gi|209751807|gb|EU891630.1|1-4029 gi|47118301|dbj|BA000007.2|4990141-4994169
ARG-ANNOT	Bla|OXA-69|AY750911|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-69:AY750911:1-825:825
CARD	Bla|OXA-69|AY750911|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|NC_010410|2175316-2176141|ARO:3001617|OXA-69 [Acinetobacter baumannii AYE]
Lahey	Bla|OXA-69|AY750911|1-825|825|betalactams|Class_D_betalactamases|OXA	AAW81340.1 AY750911.1:1-825
NCBI	Bla|OXA-69|AY750911|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|939559781|gb|CP012952.1|2270022-2270846 gi|817554816|gb|GQ406245.5|59879-59055 gi|787858845|gb|CP008706.1|2286658-2287482 gi|751410783|gb|CP010781.1|1754129-1753305 gi|672941292|gb|GQ406246.3|22324-21500 gi|672940400|gb|HM590877.5|76020-75196 gi|213985689|gb|CP001172.1|2099789-2100613 gi|213054530|gb|CP001182.1|1845660-1844836 gi|169147133|emb|CU459141.1|2175317-2176141 gi|57491157|gb|AY859527.1|1-825
Resfinder	Bla|OXA-69|AY750911|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-69_1_HM564339
CARD	gi|256862195|gb|GQ390805.1|betalactams|Class_A_betalactamases|SHV	@phgb|GQ390805|0-813|ARO:3001170|SHV-123 [Klebsiella pneumoniae]
NCBI	gi|256862195|gb|GQ390805.1|betalactams|Class_A_betalactamases|SHV	gi|256862195|gb|GQ390805.1|1-813
CARD	gi|698174213|gb|KM087861.1|betalactams|Class_C_betalactamases|MIR	@phgb|KM087861|0-1146|ARO:3002181|MIR-16 [Enterobacter asburiae]
Lahey	gi|698174213|gb|KM087861.1|betalactams|Class_C_betalactamases|MIR	AIT76114.1 KM087861.1:1-1146
NCBI	gi|698174213|gb|KM087861.1|betalactams|Class_C_betalactamases|MIR	gi|698174213|gb|KM087861.1|1-1146
ARG-ANNOT	Bla|CTX-M-7|AJ005045|1-876|976|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-7:AJ005045:1-876:976
NCBI	Bla|CTX-M-7|AJ005045|1-876|976|betalactams|Class_A_betalactamases|CTX	gi|695198364|ref|NG_034963.1|1-905
CARD	CARD|phgb|KP109678|5817-6675|ARO:3003714|PEDO-2|betalactams|Class_B_betalactamases|PEDO	@phgb|KP109678|5817-6675|ARO:3003714|PEDO-2 [Pedobacter sp. ALS-14]
NCBI	CARD|phgb|KP109678|5817-6675|ARO:3003714|PEDO-2|betalactams|Class_B_betalactamases|PEDO	gi|762020428|gb|KP109678.1|5818-6675
NCBI	Rif|NC_013450.8613267|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|499139719|gb|KC707775.1|1-3552 gi|262073980|gb|CP001781.1|540633-544184
ARG-ANNOT	Bla|cphA6|AY227052|1-765|765|betalactams|Class_B_betalactamases|CPHA	(Bla)cphA6:AY227052:1-765:765
CARD	Bla|cphA6|AY227052|1-765|765|betalactams|Class_B_betalactamases|CPHA	@phgb|AY227052|0-765|ARO:3003102|cphA6 [Aeromonas veronii bv. veronii]
NCBI	Bla|cphA6|AY227052|1-765|765|betalactams|Class_B_betalactamases|CPHA	gi|37359435|gb|AY227052.1|1-765
Resfinder	Bla|cphA6|AY227052|1-765|765|betalactams|Class_B_betalactamases|CPHA	cphA6_1_AY227052
CARD	CARD|pvgb|AE000516|783533-783908|ARO:3003395|Mycobacterium|Aminoglycosides|Aminoglycoside-resistant_30S_ribosomal_subunit_protein_S12|RPSL|RequiresSNPConfirmation	@pvgb|AE000516|783533-783908|ARO:3003395|Mycobacterium tuberculosis rpsL mutations conferring resistance to Streptomycin [Mycobacterium tuberculosis CDC1551]
NCBI	CARD|pvgb|AE000516|783533-783908|ARO:3003395|Mycobacterium|Aminoglycosides|Aminoglycoside-resistant_30S_ribosomal_subunit_protein_S12|RPSL|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|786651-787026 gi|984989958|gb|CP010339.1|785133-785508 gi|984985728|gb|CP010338.1|785362-785737 gi|984981517|gb|CP010337.1|784055-784430 gi|984967653|gb|CP010334.1|779658-780033 gi|984963331|gb|CP010333.1|784087-784462 gi|984959134|gb|CP010332.1|783307-783682 gi|984950177|gb|CP010330.1|781518-781893 gi|984945858|gb|CP010329.1|781492-781867 gi|893678627|gb|CP012095.1|783215-783590
ARG-ANNOT	Gly|VanX-Ac1|DQ246438|2221-2835|615|Glycopeptides|VanA-type_resistance_protein|VANXA	(Gly)VanX-Ac1:DQ246438:2221-2835:615
NCBI	Gly|VanX-Ac1|DQ246438|2221-2835|615|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|82658572|gb|DQ246438.1|2221-2835
Resfinder	Gly|VanX-Ac1|DQ246438|2221-2835|615|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-Ac1_6_DQ246438
CARD	Elf|CP002695.1|gene3614|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP002695|3866610-3867801|ARO:3001312|elfamycin resistant EF-Tu [Bordetella pertussis CS]
NCBI	Elf|CP002695.1|gene3614|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|973420427|gb|CP010966.1|6722-7912 gi|973420427|gb|CP010966.1|3851918-3853108 gi|973416827|gb|CP010965.1|6722-7912 gi|973416827|gb|CP010965.1|3849812-3851002 gi|937412521|gb|CP011401.1|6722-7912 gi|937412521|gb|CP011401.1|3840982-3842172 gi|937409066|gb|CP011400.1|6722-7912 gi|937409066|gb|CP011400.1|3841424-3842614 gi|937404317|gb|CP011448.1|6722-7912 gi|937404317|gb|CP011448.1|3851834-3853024 gi|937400854|gb|CP011447.1|6722-7912 gi|937400854|gb|CP011447.1|3850875-3852065 gi|937393878|gb|CP011446.1|6722-7912 gi|937393878|gb|CP011446.1|3845629-3846819 gi|937390412|gb|CP011445.1|6722-7912 gi|937390412|gb|CP011445.1|3852316-3853506 gi|937386949|gb|CP011444.1|6722-7912 gi|937386949|gb|CP011444.1|3847713-3848903 gi|937383491|gb|CP011443.1|6722-7912 gi|937383491|gb|CP011443.1|3846680-3847870
ARG-ANNOT	Bla|CTX-M-34|AY51597|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-34:AY515297:1-876:876
CARD	Bla|CTX-M-34|AY51597|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY515297|0-876|ARO:3001896|CTX-M-34 [Escherichia coli]
Lahey	Bla|CTX-M-34|AY51597|1-876|876|betalactams|Class_A_betalactamases|CTX	AAR99493.1 AY515297.1:1-876
NCBI	Bla|CTX-M-34|AY51597|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|41079306|gb|AY515297.1|1-876
Resfinder	Bla|CTX-M-34|AY51597|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-34_1_AY515297
ARG-ANNOT	Bla|CTX-M-19|AF325134|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-19:AF325134:1-876:876
CARD	Bla|CTX-M-19|AF325134|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AF325134|0-876|ARO:3001881|CTX-M-19 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-19|AF325134|1-876|876|betalactams|Class_A_betalactamases|CTX	AAK55534.1 AF325134.1:1-876
NCBI	Bla|CTX-M-19|AF325134|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|515794472|emb|HG000669.1|1550-2425 gi|27462652|gb|AF458080.1|6439-7314 gi|14189985|gb|AF325134.1|AF325134|1-876
Resfinder	Bla|CTX-M-19|AF325134|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-19_1_AF325134
ARG-ANNOT	Bla|TEM-198|AB700703|162-1022|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-198:AB700703:162-1022:861
CARD	Bla|TEM-198|AB700703|162-1022|861|betalactams|Class_A_betalactamases|TEM	@phgb|AB700703|161-1022|ARO:3001057|TEM-198 [Klebsiella pneumoniae]
Lahey	Bla|TEM-198|AB700703|162-1022|861|betalactams|Class_A_betalactamases|TEM	BAL68178.1 AB700703.1:162-1022
NCBI	Bla|TEM-198|AB700703|162-1022|861|betalactams|Class_A_betalactamases|TEM	gi|379056275|dbj|AB700703.1|162-1022
Resfinder	Bla|TEM-198|AB700703|162-1022|861|betalactams|Class_A_betalactamases|TEM	blaTEM-198_1_AB700703
NCBI	gi|393716100|dbj|AB733453.1|betalactams|Class_A_betalactamases|SHV	gi|393716100|dbj|AB733453.1|1-849
ARG-ANNOT	Bla|OXA-168|HM488989|1-822|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-168:HM488989:1-822:822
CARD	Bla|OXA-168|HM488989|1-822|822|betalactams|Class_D_betalactamases|OXA	@phgb|HM488989|0-822|ARO:3001468|OXA-168 [Acinetobacter baumannii]
Lahey	Bla|OXA-168|HM488989|1-822|822|betalactams|Class_D_betalactamases|OXA	ADK35872.1 HM488989.1:1-822
NCBI	Bla|OXA-168|HM488989|1-822|822|betalactams|Class_D_betalactamases|OXA	gi|300825675|gb|HM488989.1|1-822
Resfinder	Bla|OXA-168|HM488989|1-822|822|betalactams|Class_D_betalactamases|OXA	blaOXA-168_1_HM488989
ARG-ANNOT	Bla|CMY-14|EU600193|1702-2847|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-14:EU600193:1702-2847:1146
NCBI	Bla|CMY-14|EU600193|1702-2847|1146|betalactams|Class_C_betalactamases|CMY	gi|183238624|gb|EU600193.1|1702-2847
Resfinder	Bla|CMY-14|EU600193|1702-2847|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-14_1_EU600193
NCBI	gi|375313996|gb|JN790864.1|betalactams|Class_A_betalactamases|CTX	gi|768457552|gb|KJ125070.2|25570-26763 gi|756420160|gb|KP198616.1|25558-26751 gi|449331660|gb|KC160505.1|534-1727 gi|375313996|gb|JN790864.1|1-1194
ARG-ANNOT	Gly|VanH-D|AY082011|4937-5908|972|Glycopeptides|VanD-type_resistance_protein|VANHD	(Gly)VanH-D:AY082011:4937-5908:972
CARD	Gly|VanH-D|AY082011|4937-5908|972|Glycopeptides|VanD-type_resistance_protein|VANHD	@phgb|AY082011|4936-5908|ARO:3002944|vanHD [Enterococcus faecium]
NCBI	Gly|VanH-D|AY082011|4937-5908|972|Glycopeptides|VanD-type_resistance_protein|VANHD	gi|27461214|gb|AY082011.1|4937-5908 gi|11527843|gb|AF277571.1|AF277571|298-1269 gi|54114872|dbj|AB183866.1|1-79
Resfinder	Gly|VanH-D|AY082011|4937-5908|972|Glycopeptides|VanD-type_resistance_protein|VANHD	VanH-D_3_AY082011
ARG-ANNOT	Bla|LEN-8|AJ635424|1-789|789|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-8:AJ635424:1-789:789
CARD	Bla|LEN-8|AJ635424|1-789|789|betalactams|Class_A_betalactamases|LEN	@phgb|AJ635424|0-789|ARO:3002458|LEN-8 [Klebsiella pneumoniae]
NCBI	Bla|LEN-8|AJ635424|1-789|789|betalactams|Class_A_betalactamases|LEN	gi|46309223|emb|AJ635424.1|1-789
Resfinder	Bla|LEN-8|AJ635424|1-789|789|betalactams|Class_A_betalactamases|LEN	blaLEN8_1_AJ635424
ARG-ANNOT	Bla|SHV-167|AB733453|4-849|846|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-167:AB733453:4-849:846
CARD	Bla|SHV-167|AB733453|4-849|846|betalactams|Class_A_betalactamases|SHV	@phgb|AB733453|3-849|ARO:3001204|SHV-167 [Klebsiella pneumoniae]
NCBI	Bla|SHV-167|AB733453|4-849|846|betalactams|Class_A_betalactamases|SHV	gi|393716100|dbj|AB733453.1|4-849
ARG-ANNOT	Flq|QnrB45|JQ349152|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB45:JQ349152:1-680:680
CARD	Flq|QnrB45|JQ349152|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JQ349152|0-680|ARO:3002760|QnrB45 [Escherichia coli]
NCBI	Flq|QnrB45|JQ349152|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|375332208|gb|JQ349152.1|1-680
Resfinder	Flq|QnrB45|JQ349152|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB45_1_JQ349152
ARG-ANNOT	Bla|OXA-34|AF350424|1-771|771|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-34:AF350424:1-771:771
CARD	Bla|OXA-34|AF350424|1-771|771|betalactams|Class_D_betalactamases|OXA	@phgb|AF350424|0-771|ARO:3001428|OXA-34 [Pseudomonas aeruginosa]
NCBI	Bla|OXA-34|AF350424|1-771|771|betalactams|Class_D_betalactamases|OXA	gi|13194855|gb|AF350424.1|AF350424|1-771
Resfinder	Bla|OXA-34|AF350424|1-771|771|betalactams|Class_D_betalactamases|OXA	blaOXA-34_1_AF350424
CARD	1021|AJ243209.1|AJ243209|MLS|Macrolide_resistance_efflux_pumps|MSRC	@phgb|AJ243209|0-405|ARO:3002819|msrC [Enterococcus faecium]
NCBI	1021|AJ243209.1|AJ243209|MLS|Macrolide_resistance_efflux_pumps|MSRC	gi|6687492|emb|AJ243209.1|1-405 gi|88770353|gb|DQ384855.1|1-386
CARD	AGly|AF043381.1|gene2|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF043381|251-863|ARO:3002580|AAC(6')-Ib9 [Pseudomonas aeruginosa]
NCBI	AGly|AF043381.1|gene2|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|4105085|gb|AF043381.1|AF043381|252-863 gi|496684371|gb|KC543497.1|457009-456430
CARD	Flq|QnrB61_1_AB734053|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|AB734053|2303-2948|ARO:3002774|QnrB61 [Citrobacter braakii]
NCBI	Flq|QnrB61_1_AB734053|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|469663603|dbj|AB734053.1|2304-2948
Resfinder	Flq|QnrB61_1_AB734053|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB61_1_AB734053
ARG-ANNOT	Flq|QepA|AB263754|7052-8587|1536|Fluoroquinolones|Quinolone_active_efflux|QEPA	(Flq)QepA:AB263754:7052-8587:1536
NCBI	Flq|QepA|AB263754|7052-8587|1536|Fluoroquinolones|Quinolone_active_efflux|QEPA	gi|531867533|gb|JX997935.2|7084-8619 gi|256532070|gb|FJ744121.1|8160-6625 gi|695213650|ref|NG_036638.1|9616-8081 gi|172051323|emb|AM886293.1|122224-120689 gi|695212717|ref|NG_036480.1|8587-7052 gi|695212383|ref|NG_036406.1|4980-3445 gi|157863070|gb|EU161943.1|395-1 gi|908210419|dbj|LC066224.1|365-1 gi|226295419|gb|FJ842530.1|1-216
NCBI	1654|AY920928.1|AY920928|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|374282195|gb|JN596279.1|3804-4322 gi|208436671|gb|EU886978.1|86-604 gi|66269634|gb|AY920928.1|5101-5619
CARD	Bla|FJ666066.1|gene1|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666066|0-1194|ARO:3002500|PDC-3 [Pseudomonas aeruginosa]
NCBI	Bla|FJ666066.1|gene1|betalactams|Class_C_betalactamases|PDC	gi|229597521|gb|FJ666066.1|1-1194
ARG-ANNOT	Flq|QnrB2|DQ351242|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB2:DQ351242:1-645:645
NCBI	Flq|QnrB2|DQ351242|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|908266278|gb|CP012170.1|128177-128821 gi|828945622|gb|CP011617.1|112880-113524 gi|828927436|gb|CP011596.1|111553-112197 gi|742988600|gb|CP010378.1|7614-8258 gi|704485899|gb|KJ186154.1|34228-33584 gi|686483893|gb|KM111268.1|3779-3135 gi|558708306|gb|HQ419285.1|10483-9839 gi|429201046|gb|JX193301.1|34756-34112 gi|402715290|gb|JX101693.1|64561-63917 gi|695215005|ref|NG_036923.1|10052-9408
Resfinder	Flq|QnrB2|DQ351242|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB2_1_HM125698
CARD	CARD|pvgb|CP003583|1050805-1052287|ARO:3003092|Enterococcus|Lipopeptides|Daptomycin-resistant_cls|CLS|RequiresSNPConfirmation	@pvgb|CP003583|1050805-1052287|ARO:3003092|Enterococcus faecium cls conferring resistance to daptomycin [Enterococcus faecium DO]
NCBI	CARD|pvgb|CP003583|1050805-1052287|ARO:3003092|Enterococcus|Lipopeptides|Daptomycin-resistant_cls|CLS|RequiresSNPConfirmation	gi|974999704|gb|CP013994.1|1693837-1692355 gi|529202214|gb|CP006620.1|1094114-1095596 gi|388532432|gb|CP003583.1|1050806-1052288 gi|378937014|gb|CP003351.1|1279909-1278427
ARG-ANNOT	Bla|CTX-M-131|JN969893|1-873|873|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-131:JN969893:1-873:873
NCBI	Bla|CTX-M-131|JN969893|1-873|873|betalactams|Class_A_betalactamases|CTX	gi|823104948|gb|JN969893.3|2534-3406
Resfinder	Bla|CTX-M-131|JN969893|1-873|873|betalactams|Class_A_betalactamases|CTX	blaCTX-M-131_1_JN969893
ARG-ANNOT	Bla|OXY2-9|FJ785625|132-1001|870|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-9:FJ785625:132-1001:870
CARD	Bla|OXY2-9|FJ785625|132-1001|870|betalactams|Class_A_betalactamases|OXY	@phgb|FJ785625|131-1001|ARO:3002404|OXY-2-9 [Klebsiella oxytoca]
NCBI	Bla|OXY2-9|FJ785625|132-1001|870|betalactams|Class_A_betalactamases|OXY	gi|257136309|gb|FJ785625.1|132-1001
Resfinder	Bla|OXY2-9|FJ785625|132-1001|870|betalactams|Class_A_betalactamases|OXY	blaOXY-2-9_9_FJ785625
NCBI	gi|223006550|emb|AM941159.1|betalactams|Class_A_betalactamases|TEM	gi|223006550|emb|AM941159.1|1-1092
NCBI	gi|160948450|emb|AM176553.2|betalactams|Class_A_betalactamases|SHV	gi|160948450|emb|AM176553.2|1-891
NCBI	gi|22758830|gb|AY135661.1|betalactams|Class_B_betalactamases|VIM	gi|825088250|gb|KP975074.1|107551-106682 gi|825088250|gb|KP975074.1|106601-105768 gi|636528809|gb|KJ551510.1|1120-1989 gi|402694763|gb|JX275775.1|1316-2185 gi|695225810|ref|NG_041423.1|17-886 gi|346720643|gb|JF915437.1|18-887 gi|346720643|gb|JF915437.1|900-1057 gi|283580179|gb|GU250441.1|71-940 gi|283580179|gb|GU250441.1|953-1110 gi|283580176|gb|GU250440.1|50-919 gi|283580176|gb|GU250440.1|932-1089 gi|242322372|emb|FN397623.1|197-1066 gi|194032844|emb|FM179467.1|206-1075 gi|194032844|emb|FM179467.1|1088-1245 gi|695212620|ref|NG_036464.1|6565-7434
NCBI	Flq|B13_1_JN173050|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|161579479|gb|EU273756.1|37-681 gi|161579477|gb|EU273755.1|37-681
Resfinder	Flq|B13_1_JN173050|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB13_1_JN173050
CARD	CARD|phgb|HE999704|947296-947620|ARO:3000026|mepA|Multi-drug_resistance|Multi-drug_efflux_pumps|MEPA	@phgb|HE999704|947296-947620|ARO:3000026|mepA [Listeria monocytogenes]
NCBI	CARD|phgb|HE999704|947296-947620|ARO:3000026|mepA|Multi-drug_resistance|Multi-drug_efflux_pumps|MEPA	gi|441472679|emb|HE999705.1|947036-947360 gi|441469547|emb|HE999704.1|947297-947621 gi|584269433|emb|HG813249.1|1296253-1296567 gi|345532625|gb|CP002001.1|1041040-1041354
ARG-ANNOT	gi|417350421|gb|JX896165.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-134:JX896165:1-876:876
CARD	gi|417350421|gb|JX896165.1|betalactams|Class_A_betalactamases|CTX	@phgb|JX896165|0-876|ARO:3001992|CTX-M-134 [Escherichia coli]
Lahey	gi|417350421|gb|JX896165.1|betalactams|Class_A_betalactamases|CTX	AFX60298.1 JX896165.1:1-876
NCBI	gi|417350421|gb|JX896165.1|betalactams|Class_A_betalactamases|CTX	gi|668347707|dbj|AB976597.1|340-1215 gi|417350421|gb|JX896165.1|1-876
Resfinder	gi|417350421|gb|JX896165.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-134_1_JX896165
NCBI	Bla|CTX-M-17_2_AF454633|betalactams|Class_A_betalactamases|CTX	gi|695208600|ref|NG_035613.1|757-1632
Resfinder	Bla|CTX-M-17_2_AF454633|betalactams|Class_A_betalactamases|CTX	blaCTX-M-17_2_AF454633
ARG-ANNOT	Bla|TEM-90|AF351241|90-950|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-90:AF351241:90-950:861
CARD	Bla|TEM-90|AF351241|90-950|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF351241|89-950|ARO:3000957|TEM-90 [Escherichia coli]
Lahey	Bla|TEM-90|AF351241|90-950|861|betalactams|Class_A_betalactamases|TEM	AAK30619.1 AF351241.1:90-950
NCBI	Bla|TEM-90|AF351241|90-950|861|betalactams|Class_A_betalactamases|TEM	gi|695200318|ref|NG_035427.1|90-950
Resfinder	Bla|TEM-90|AF351241|90-950|861|betalactams|Class_A_betalactamases|TEM	blaTEM-90_1_AF351241
CARD	Bla|OXA-360_1_KF421163|betalactams|Class_D_betalactamases|OXA	@phgb|KF421163|0-831|ARO:3001547|OXA-360 [Acinetobacter schindleri]
Lahey	Bla|OXA-360_1_KF421163|betalactams|Class_D_betalactamases|OXA	AGZ83156.1 KF421163.1:1-831
NCBI	Bla|OXA-360_1_KF421163|betalactams|Class_D_betalactamases|OXA	gi|556904159|gb|KF421163.1|1-831
Resfinder	Bla|OXA-360_1_KF421163|betalactams|Class_D_betalactamases|OXA	blaOXA-360_1_KF421163
NCBI	MLS|AB000617.1|gene3|Multi-drug_resistance|MDR_regulator|tetR|RequiresSNPConfirmation	gi|983204966|gb|CP014166.1|290695-290129 gi|807072327|gb|CP011115.1|290696-290130 gi|749183975|gb|CP010314.1|290698-290132 gi|728887195|gb|CP010053.1|290708-290142 gi|728882887|gb|CP010052.1|290705-290139 gi|724425628|emb|LN680001.1|290684-290118 gi|723796434|emb|LN649259.1|290684-290118 gi|649013680|gb|CP008698.1|290706-290140 gi|649009321|gb|CP007800.1|290706-290140 gi|558566549|gb|CP006881.1|290703-290137
NCBI	Bla|cphA1_1_AY261379|betalactams|Class_B_betalactamases|CPHA	gi|33150469|gb|AY261379.1|1-765
Resfinder	Bla|cphA1_1_AY261379|betalactams|Class_B_betalactamases|CPHA	cphA1_1_AY261379
ARG-ANNOT	Bla|MIR-1|M37839|928-2073|1146|betalactams|Class_C_betalactamases|MIR	(Bla)MIR-1:M37839:928-2073:1146
CARD	Bla|MIR-1|M37839|928-2073|1146|betalactams|Class_C_betalactamases|MIR	@phgb|M37839|927-2073|ARO:3002166|MIR-1 [Klebsiella pneumoniae]
Lahey	Bla|MIR-1|M37839|928-2073|1146|betalactams|Class_C_betalactamases|MIR	AAD22636.1 M37839.2:928-2073
NCBI	Bla|MIR-1|M37839|928-2073|1146|betalactams|Class_C_betalactamases|MIR	gi|695199008|ref|NG_035142.1|928-2073
Resfinder	Bla|MIR-1|M37839|928-2073|1146|betalactams|Class_C_betalactamases|MIR	blaMIR-1_1_M37839
ARG-ANNOT	AGly|AadA3|AF047479|1296-2087|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA3:AF047479:1296-2087:792
CARD	AGly|AadA3|AF047479|1296-2087|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AF047479|1295-2087|ARO:3002603|aadA3 [Plasmid NR79]
NCBI	AGly|AadA3|AF047479|1296-2087|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|213958578|gb|AF047479.2|1296-2087
Resfinder	AGly|AadA3|AF047479|1296-2087|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA3_1_AF047479
ARG-ANNOT	Tmt|DfrA15b|AJ867237|117-650|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA15b:AJ867237:177-650:474
NCBI	Tmt|DfrA15b|AJ867237|117-650|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|56542059|emb|AJ867237.1|177-650
Resfinder	Tmt|DfrA15b|AJ867237|117-650|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA15b_1_AJ867237
ARG-ANNOT	Tet|TetA|JX424423|94438-95712|1275|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	(Tet)TetA:JX424423:94438-95712:1275
NCBI	Tet|TetA|JX424423|94438-95712|1275|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|970698093|gb|KT988018.1|14675-15949 gi|974751143|gb|KU238092.1|6854-5580 gi|975048878|gb|CP013962.1|2246471-2247745 gi|973710347|gb|CP013833.1|73871-75145 gi|966626646|gb|CP013657.1|127373-126099 gi|959153704|gb|CP012993.1|50421-49147 gi|959147947|gb|CP012988.1|42798-44072 gi|952556149|emb|LN879484.1|75479-74205 gi|944397480|gb|CP013024.1|62940-64214 gi|933686806|gb|KT779550.1|83505-84779
ARG-ANNOT	417|HQ541434.2|HQ541434|betalactams|Class_A_betalactamases|PME	(Bla)PME-1:HQ541434:3071-4000:930
NCBI	417|HQ541434.2|HQ541434|betalactams|Class_A_betalactamases|PME	gi|323721334|gb|HQ541434.2|3071-4000 gi|969535508|gb|KT364224.1|1000-1085
Resfinder	417|HQ541434.2|HQ541434|betalactams|Class_A_betalactamases|PME	blaPME-1_1_HQ541434
CARD	CARD|phgb|AP009048|4304505-4306557|ARO:3003549|mdtO|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTO	@phgb|AP009048|4304505-4306557|ARO:3003549|mdtO [Escherichia coli str. K-12 substr. W3110];@phgb|NC_007779|4304505-4306557|ARO:3003549|mdtO [Escherichia coli str. K-12 substr. W3110];@phgb|U00096|4301026-4303078|ARO:3003549|mdtO [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|AP009048|4304505-4306557|ARO:3003549|mdtO|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTO	gi|985000614|gb|CP014225.1|2498116-2500167 gi|939732440|gb|CP011343.2|4281331-4283382 gi|939731527|gb|CP011342.2|4282017-4284068 gi|937526251|gb|CP012870.1|340626-338575 gi|937521852|gb|CP012869.1|340626-338575 gi|937517453|gb|CP012868.1|340626-338575 gi|932857508|emb|LN877770.1|101786-103837 gi|923416119|gb|CP011113.1|4259092-4261143 gi|857137982|gb|CP011495.1|878457-880508 gi|817589947|gb|CP011324.1|4264676-4266727
NCBI	ACou|NC_002951.3236245|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|610395799|gb|CP007539.1|1408359-1410356 gi|57284222|gb|CP000046.1|1395973-1397970
ARG-ANNOT	Bla|CMY-47|HM046998|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-47:HM046998:1040-2185:1146
CARD	Bla|CMY-47|HM046998|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	@phgb|HM046998|1039-2185|ARO:3002058|CMY-47 [Citrobacter freundii]
Lahey	Bla|CMY-47|HM046998|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	ADH82410.1 HM046998.2:1040-2185
NCBI	Bla|CMY-47|HM046998|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	gi|347364914|gb|HM046998.2|1040-2185
Resfinder	Bla|CMY-47|HM046998|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-47_1_HM046998
ARG-ANNOT	Flq|QnrB3|DQ303920|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB3:DQ303920:37-681:645
CARD	Flq|QnrB3|DQ303920|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|DQ303920|0-681|ARO:3002716|QnrB3 [Escherichia coli]
NCBI	Flq|QnrB3|DQ303920|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|83367095|gb|DQ303920.1|1-681
Resfinder	Flq|QnrB3|DQ303920|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB3_1_DQ303920
ARG-ANNOT	Bla|OXA-10|HQ386834|1465-2265|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-10:HQ386834:1465-2265:801
CARD	Bla|OXA-10|HQ386834|1465-2265|801|betalactams|Class_D_betalactamases|OXA	@phgb|AF205943|7511-8312|ARO:3001405|OXA-10 [Escherichia coli]
Lahey	Bla|OXA-10|HQ386834|1465-2265|801|betalactams|Class_D_betalactamases|OXA	AAB60534.1 U37105.2:1307-2107
NCBI	Bla|OXA-10|HQ386834|1465-2265|801|betalactams|Class_D_betalactamases|OXA	gi|974141864|gb|KT362173.1|604-1404 gi|974141864|gb|KT362173.1|3615-4415 gi|971497538|gb|CP012902.1|77772-76972 gi|950648740|gb|KT959108.1|8348-9148 gi|950648732|gb|KT959107.1|8209-9009 gi|950648725|gb|KT959106.1|8209-9009 gi|950648717|gb|KT959105.1|8209-9009 gi|950648709|gb|KT959104.1|8209-9009 gi|950648702|gb|KT959103.1|8209-9009 gi|933686117|gb|KR827393.1|86739-87539 gi|930425904|gb|KR067584.1|1217-2017
Resfinder	Bla|OXA-10|HQ386834|1465-2265|801|betalactams|Class_D_betalactamases|OXA	blaOXA-10_2_EU886981
ARG-ANNOT	136|HM990671.1|HM990671|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	(MLS)LsaC:HM990671:5193-6671:1479
CARD	136|HM990671.1|HM990671|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	@phgb|HM990671|5192-6671|ARO:3003112|lsaC [Streptococcus agalactiae]
NCBI	136|HM990671.1|HM990671|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	gi|327202835|gb|HM990671.1|5193-6671 gi|925181425|gb|CP012601.1|1383593-1383566 gi|462315744|gb|APGK01045332.1|2211-2238
Resfinder	136|HM990671.1|HM990671|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	lsa(C)_1_HM990671
CARD	CARD|phgb|DQ212986|2979-4086|ARO:3002937|vanSG|Glycopeptides|VanG-type_regulator|VANSG	@phgb|DQ212986|2979-4086|ARO:3002937|vanSG [Enterococcus faecalis]
NCBI	CARD|phgb|DQ212986|2979-4086|ARO:3002937|vanSG|Glycopeptides|VanG-type_regulator|VANSG	gi|762041216|gb|KF697366.1|35690-36797 gi|672937785|gb|KF686317.1|35690-36797 gi|674114364|gb|CP007573.1|761544-762651 gi|674107077|gb|CP007570.1|639800-640907 gi|77380191|gb|DQ212986.1|2980-4087 gi|33355827|gb|AY271782.1|18045-19152
ARG-ANNOT	Bla|VIM-37|JX982636|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-37:JX982636:1-801:801
CARD	Bla|VIM-37|JX982636|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|JX982636|0-801|ARO:3002307|VIM-37 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-37|JX982636|1-801|801|betalactams|Class_B_betalactamases|VIM	AGC50807.1 JX982636.1:1-801
NCBI	Bla|VIM-37|JX982636|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|441494189|gb|JX982636.1|1-801 gi|825088496|gb|KP975075.1|7975-7820 gi|584292460|gb|KF850517.1|1484-1639 gi|346720643|gb|JF915437.1|900-1055 gi|346720640|gb|JF905459.1|1522-1677 gi|283580179|gb|GU250441.1|953-1108 gi|283580176|gb|GU250440.1|932-1087 gi|270210847|gb|GU181269.1|1564-1719 gi|269978383|gb|GU181265.1|1983-2138 gi|194032844|emb|FM179467.1|1088-1243
Resfinder	Bla|VIM-37|JX982636|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-37_1_JX982636
NCBI	Gly|ddlA2_2_AL939117|Glycopeptides|VanA-type_resistance_protein|VANA	gi|24427162|emb|AL939117.1|54367-55407
Resfinder	Gly|ddlA2_2_AL939117|Glycopeptides|VanA-type_resistance_protein|VANA	ddlA2-Sc_2_AL939117
CARD	CARD|phgb|AF305837|0-876|ARO:3001875|CTX-M-12|betalactams|Class_A_betalactamases|CTX	@phgb|AF305837|0-876|ARO:3001875|CTX-M-12 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF305837|0-876|ARO:3001875|CTX-M-12|betalactams|Class_A_betalactamases|CTX	gi|47087855|gb|AY571969.1|10-886 gi|11321257|gb|AF305837.1|AF305837|1-877 gi|116257450|gb|DQ821704.2|1784-2659 gi|695211887|ref|NG_036283.1|1705-2580 gi|31096325|gb|AY293073.1|1-876
ARG-ANNOT	Bla|TEM-21|AF466526|1346-2206|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-21:AF466526:1346-2206:861
NCBI	Bla|TEM-21|AF466526|1346-2206|861|betalactams|Class_A_betalactamases|TEM	gi|24431107|gb|AF466526.1|1346-2206
NCBI	gi|237846382|gb|FJ919776.1|betalactams|Class_A_betalactamases|TEM	gi|237846382|gb|FJ919776.1|1-1069
NCBI	gi|2648042|emb|X97254.1|betalactams|Class_A_betalactamases|TEM	gi|2648042|emb|X97254.1|1-1011
NCBI	gi|90855321|emb|AJ920369.1|betalactams|Class_A_betalactamases|SHV	gi|961666360|gb|KT185451.1|77484-76625 gi|954629879|gb|CP013215.1|268448-269307 gi|933686117|gb|KR827393.1|97036-97895 gi|918463070|gb|KP987216.1|9661-8802 gi|817046807|gb|KP893385.1|116976-116117 gi|908266278|gb|CP012170.1|159145-160004 gi|902618894|gb|CP011987.1|37137-37996 gi|902611358|gb|CP011977.1|33461-34320 gi|902604381|gb|CP011983.1|6491-7350 gi|873464235|gb|KR059865.1|7815-8674
CARD	CARD|pvgb|HE999704|2567249-2568437|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|HE999704|2567249-2568437|ARO:3001312|elfamycin resistant EF-Tu [Listeria monocytogenes]
NCBI	CARD|pvgb|HE999704|2567249-2568437|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|973722074|gb|CP013919.1|215889-214701 gi|970876009|gb|CP013724.1|1286658-1287846 gi|970873114|gb|CP013723.1|2043585-2044773 gi|970870287|gb|CP013722.1|1744236-1743048 gi|827394152|gb|CP007689.1|2683475-2684663 gi|827391257|gb|CP007688.1|2733323-2734511 gi|827388439|gb|CP007687.1|2682007-2683195 gi|827382749|gb|CP007685.1|2733139-2734327 gi|827379923|gb|CP007684.1|2693409-2694597 gi|820767303|gb|CP011397.1|2702889-2704077
ARG-ANNOT	1312|AJ536835.1|AJ536835|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-7:AJ536835:150-946:801
CARD	1312|AJ536835.1|AJ536835|betalactams|Class_B_betalactamases|VIM	@phgb|AJ536835|149-947|ARO:3002277|VIM-7 [Pseudomonas aeruginosa]
Lahey	1312|AJ536835.1|AJ536835|betalactams|Class_B_betalactamases|VIM	CAD61201.1 AJ536835.1:150-947
NCBI	1312|AJ536835.1|AJ536835|betalactams|Class_B_betalactamases|VIM	gi|156104616|emb|AM778842.1|13145-12348 gi|30014071|emb|AJ536835.1|150-947
Resfinder	1312|AJ536835.1|AJ536835|betalactams|Class_B_betalactamases|VIM	blaVIM-7_1_AJ536835
ARG-ANNOT	Bla|BIL-1|X74512|127-1272|1146|betalactams|Class_C_betalactamases|CMY	(Bla)BIL-1:X74512:127-1272:1146
NCBI	Bla|BIL-1|X74512|127-1272|1146|betalactams|Class_C_betalactamases|CMY	gi|433560|emb|X74512.1|127-1272
Resfinder	Bla|BIL-1|X74512|127-1272|1146|betalactams|Class_C_betalactamases|CMY	blaBIL-1_1_X74512
CARD	23|U58210.1|STU58210|betalactams|Penicillin_binding_protein|PBP2B	@phgb|U58210|2048-4163|ARO:3003042|PBP2b [Streptococcus thermophilus]
NCBI	23|U58210.1|STU58210|betalactams|Penicillin_binding_protein|PBP2B	gi|1685109|gb|U58210.1|STU58210|2049-4163
ARG-ANNOT	Bla|GOB-9|AY647246|1-873|873|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-9:AY647246:1-873:873
NCBI	Bla|GOB-9|AY647246|1-873|873|betalactams|Class_B_betalactamases|GOB	gi|49798134|gb|AY647246.1|1-873
Resfinder	Bla|GOB-9|AY647246|1-873|873|betalactams|Class_B_betalactamases|GOB	blaGOB-9_1_AY647246
CARD	CARD|pvgb|CP002695|3866610-3867801|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP002695|3866610-3867801|ARO:3001312|elfamycin resistant EF-Tu [Bordetella pertussis CS]
NCBI	CARD|pvgb|CP002695|3866610-3867801|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|973420427|gb|CP010966.1|3851918-3853109 gi|973420427|gb|CP010966.1|6722-7912 gi|973416827|gb|CP010965.1|3849812-3851003 gi|973416827|gb|CP010965.1|6722-7912 gi|937412521|gb|CP011401.1|3840982-3842173 gi|937412521|gb|CP011401.1|6722-7912 gi|937409066|gb|CP011400.1|3841424-3842615 gi|937409066|gb|CP011400.1|6722-7912 gi|937404317|gb|CP011448.1|3851834-3853025 gi|937404317|gb|CP011448.1|6722-7912 gi|937400854|gb|CP011447.1|3850875-3852066 gi|937400854|gb|CP011447.1|6722-7912 gi|937393878|gb|CP011446.1|3845629-3846820 gi|937393878|gb|CP011446.1|6722-7912 gi|937390412|gb|CP011445.1|3852316-3853507 gi|937390412|gb|CP011445.1|6722-7912 gi|937386949|gb|CP011444.1|3847713-3848904 gi|937386949|gb|CP011444.1|6722-7912 gi|937383491|gb|CP011443.1|3846680-3847871 gi|937383491|gb|CP011443.1|6722-7912
NCBI	Tet|tetQ_1_L33696|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	gi|499664|gb|L33696.1|PVOTETQ|825-2750
Resfinder	Tet|tetQ_1_L33696|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	tet(Q)_1_L33696
ARG-ANNOT	Bla|IND-8|GU186044|40-759|720|betalactams|Class_B_betalactamases|IND	(Bla)IND-8:GU186044:40-759:720
CARD	Bla|IND-8|GU186044|40-759|720|betalactams|Class_B_betalactamases|IND	@phgb|GU186044|39-759|ARO:3002264|IND-8 [Chryseobacterium indologenes]
Lahey	Bla|IND-8|GU186044|40-759|720|betalactams|Class_B_betalactamases|IND	ACZ65152.1 GU186044.1:40-759
NCBI	Bla|IND-8|GU186044|40-759|720|betalactams|Class_B_betalactamases|IND	gi|270266459|gb|GU186044.1|40-759
Resfinder	Bla|IND-8|GU186044|40-759|720|betalactams|Class_B_betalactamases|IND	blaIND-8_1_GU186044
CARD	CARD|phgb|AF015628|1306-1945|ARO:3002842|vatC|MLS|Streptogramin_A_O-acetyltransferase|VATC	@phgb|AF015628|1306-1945|ARO:3002842|vatC [Staphylococcus cohnii]
NCBI	CARD|phgb|AF015628|1306-1945|ARO:3002842|vatC|MLS|Streptogramin_A_O-acetyltransferase|VATC	gi|695198733|ref|NG_035070.1|1307-1946
NCBI	Sul|NC_002695.1.916103|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|937297913|gb|CP012802.1|3939786-3938938 gi|734586714|gb|CP010304.1|4085721-4084873 gi|675820603|emb|LM997165.1|335747-334899 gi|667689599|gb|CP008957.1|4155036-4154188 gi|666001753|gb|CP008805.1|4120986-4120138 gi|386794017|gb|CP001925.1|3994669-3993821 gi|374356928|gb|CP003109.1|3864577-3863729 gi|290760697|gb|CP001846.1|3956094-3955246 gi|254590536|gb|CP001368.1|4125217-4124369 gi|209758267|gb|EU894885.1|46-894
NCBI	1863|AJ620678.1|AJ620678|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|953357758|gb|KT290957.1|3027-3701 gi|953357739|gb|KT290954.1|3027-3701 gi|953357733|gb|KT290953.1|3027-3701 gi|425862464|gb|JX566710.1|3027-3701 gi|317017986|gb|GU390399.1|2988-3662 gi|42516777|emb|AJ620678.1|3665-4339 gi|953357751|gb|KT290956.1|2419-3082 gi|953357745|gb|KT290955.1|1935-2598 gi|617018635|gb|KJ420611.1|2446-3109 gi|957761167|gb|KT440883.1|4196-4853
CARD	CARD|phgb|AY743434|46-1198|ARO:3002029|CMY-18|betalactams|Class_C_betalactamases|CMY	@phgb|AY743434|46-1198|ARO:3002029|CMY-18 [Escherichia coli]
NCBI	CARD|phgb|AY743434|46-1198|ARO:3002029|CMY-18|betalactams|Class_C_betalactamases|CMY	gi|53854915|gb|AY743434.1|47-1199
NCBI	1742|AF313471.1|AF313471|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|984881271|gb|CP014215.1|2293499-2292708 gi|984881271|gb|CP014215.1|2306263-2305472 gi|974751547|gb|KU130294.1|205907-205116 gi|974022331|gb|CP013924.1|1440234-1441025 gi|973715451|gb|CP013836.1|109167-108376 gi|969995259|gb|KT317079.1|2315-3106 gi|969995242|gb|KT317078.1|4201-4992 gi|969995220|gb|KT317076.1|5176-5967 gi|969995200|gb|KT317075.1|7062-7853 gi|969972869|gb|KT354506.1|6167-6958 gi|953773532|gb|CP013224.1|40675-39884
Resfinder	1742|AF313471.1|AF313471|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA1_3_JQ414041
CARD	gi|4558518|gb|M37839.2|KPNMIR1|betalactams|Class_C_betalactamases|MIR	@phgb|M37839|927-2073|ARO:3002166|MIR-1 [Klebsiella pneumoniae]
NCBI	gi|4558518|gb|M37839.2|KPNMIR1|betalactams|Class_C_betalactamases|MIR	gi|695199008|ref|NG_035142.1|928-2074
ARG-ANNOT	AGly|Aac6-Ih|L29044|352-792|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Ih:L29044:352-792:441
CARD	AGly|Aac6-Ih|L29044|352-792|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|L29044|351-792|ARO:3002555|AAC(6')-Ih [Acinetobacter baumannii]
NCBI	AGly|Aac6-Ih|L29044|352-792|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|961609383|gb|KT778793.1|151-591 gi|961609381|gb|KT778792.1|151-591 gi|961609377|gb|KT778790.1|151-591 gi|961609375|gb|KT778789.1|151-591 gi|961609371|gb|KT778787.1|151-591 gi|924421182|gb|KP890934.1|3329-3769 gi|547386|gb|L29044.1|ACCAAC6IH|352-792
Resfinder	AGly|Aac6-Ih|L29044|352-792|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Ih_1_L29044
NCBI	gi|591389163|gb|KJ135342.1|betalactams|Class_D_betalactamases|OXA	gi|591389163|gb|KJ135342.1|1-887
NCBI	Flq|FN543093.2|gene3588|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|323575285|emb|FN543093.2|3646074-3643804
ARG-ANNOT	653|unknown_id|unknown_name|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA14:AJ884726:540-1325:786
NCBI	653|unknown_id|unknown_name|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|60219174|emb|AJ884726.1|1325-540
ARG-ANNOT	482|AY077733.1|AY077733|betalactams|Class_A_betalactamases|CTX	(Bla)ERP-1:AY077733:1-882:882
NCBI	482|AY077733.1|AY077733|betalactams|Class_A_betalactamases|CTX	gi|20384875|gb|AY077733.1|1-882
Resfinder	482|AY077733.1|AY077733|betalactams|Class_A_betalactamases|CTX	blaERP-1_1_AY077733
NCBI	gi|94960150|gb|DQ519088.1|betalactams|Class_D_betalactamases|OXA	gi|94960150|gb|DQ519088.1|1-865 gi|742999896|gb|CP010397.1|2075049-2075912
NCBI	1825|AB777500.1|AB777500|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|954629879|gb|CP013215.1|130748-131302 gi|944545016|gb|KR868995.1|335-889 gi|944545013|gb|KR868994.1|334-888 gi|806639053|gb|KM972600.1|1221-1775 gi|806639006|gb|KM972594.1|1194-1748 gi|806638978|gb|KM972589.1|1194-1748 gi|925170830|gb|KR337993.1|2007-2561 gi|925170817|gb|KR337990.1|1043-1597 gi|918039404|gb|KR259332.1|1702-2256 gi|914244709|gb|KR184824.1|537-1091
Resfinder	1825|AB777500.1|AB777500|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aacA4_1_KM278199
ARG-ANNOT	Bla|ACT-5|FJ237369|1-1146|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-5:FJ237369:1-1146:1146
CARD	Bla|ACT-5|FJ237369|1-1146|1146|betalactams|Class_C_betalactamases|ACT	@phgb|FJ237369|0-1146|ARO:3001824|ACT-5 [Escherichia coli]
Lahey	Bla|ACT-5|FJ237369|1-1146|1146|betalactams|Class_C_betalactamases|ACT	ACJ05689.1 FJ237369.1:1-1146
NCBI	Bla|ACT-5|FJ237369|1-1146|1146|betalactams|Class_C_betalactamases|ACT	gi|210061218|gb|FJ237369.1|1-1146
Resfinder	Bla|ACT-5|FJ237369|1-1146|1146|betalactams|Class_C_betalactamases|ACT	blaACT-5_1_FJ237369
ARG-ANNOT	gi|2393719|gb|U59183.1|PAU59183|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-13:U59183:940-1740:801
CARD	gi|2393719|gb|U59183.1|PAU59183|betalactams|Class_D_betalactamases|OXA	@phgb|U59183|939-1740|ARO:3001408|OXA-13 [Pseudomonas aeruginosa]
Lahey	gi|2393719|gb|U59183.1|PAU59183|betalactams|Class_D_betalactamases|OXA	AAC46344.1 U59183.1:940-1740
NCBI	gi|2393719|gb|U59183.1|PAU59183|betalactams|Class_D_betalactamases|OXA	gi|2393719|gb|U59183.1|PAU59183|940-1740
Resfinder	gi|2393719|gb|U59183.1|PAU59183|betalactams|Class_D_betalactamases|OXA	blaOXA-13_1_U59183
CARD	gi|698174173|gb|KM087841.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087841|0-1140|ARO:3002149|DHA-18 [Morganella morganii]
Lahey	gi|698174173|gb|KM087841.1|betalactams|Class_C_betalactamases|DHA	AIT76094.1 KM087841.1:1-1140
NCBI	gi|698174173|gb|KM087841.1|betalactams|Class_C_betalactamases|DHA	gi|698174173|gb|KM087841.1|1-1140 gi|602655183|gb|KJ135981.1|1-1073
ARG-ANNOT	gi|111054506|gb|DQ836922.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-92:DQ836922:1-861:861
CARD	gi|111054506|gb|DQ836922.1|betalactams|Class_A_betalactamases|SHV	@phgb|DQ836922|0-861|ARO:3001144|SHV-92 [Klebsiella pneumoniae]
Lahey	gi|111054506|gb|DQ836922.1|betalactams|Class_A_betalactamases|SHV	ABH04327.1 DQ836922.1:1-861
NCBI	gi|111054506|gb|DQ836922.1|betalactams|Class_A_betalactamases|SHV	gi|695211927|ref|NG_036291.1|1-861
Resfinder	gi|111054506|gb|DQ836922.1|betalactams|Class_A_betalactamases|SHV	blaSHV-92_1_DQ836922
NCBI	Flq|NC_002758.1119966|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|156720466|dbj|AP009324.1|7005-9674 gi|47208328|dbj|BA000017.4|7005-9674
CARD	gi|757399513|gb|KP050489.1|betalactams|Class_A_betalactamases|SHV	@phgb|KP050489|0-861|ARO:3001364|SHV-182 [Klebsiella pneumoniae]
Lahey	gi|757399513|gb|KP050489.1|betalactams|Class_A_betalactamases|SHV	AJO16042.1 KP050489.1:1-861
NCBI	gi|757399513|gb|KP050489.1|betalactams|Class_A_betalactamases|SHV	gi|757399513|gb|KP050489.1|1-861
NCBI	AGly|NC_004973.1.1149626|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|575453416|gb|CP006956.1|298743-299579 gi|575450852|gb|CP006955.1|2355426-2354590 gi|481063295|gb|CP005383.1|2130235-2129399 gi|469487914|gb|CP003745.1|100549-101385 gi|9967611|emb|AJ293027.1|9782-10618 gi|9967611|emb|AJ293027.1|6278-6503 gi|7007382|emb|AJ271879.1|8271-9107 gi|695209907|ref|NG_035903.1|4633-5469
ARG-ANNOT	Gly|VanH-E|AF155139|4979-5947|969|Glycopeptides|VanE-type_resistance_protein|VANHE	(Gly)VanH-E:AF155139:4979-5947:969
CARD	Gly|VanH-E|AF155139|4979-5947|969|Glycopeptides|VanE-type_resistance_protein|VANHE	@phgb|AF155139|4978-5947|ARO:3002945|vanHF [Paenibacillus popilliae ATCC 14706]
NCBI	Gly|VanH-E|AF155139|4979-5947|969|Glycopeptides|VanE-type_resistance_protein|VANHE	gi|40363824|gb|AF155139.2|4979-5947 gi|817623371|gb|CP011076.1|309857-309958
Resfinder	Gly|VanH-E|AF155139|4979-5947|969|Glycopeptides|VanE-type_resistance_protein|VANHE	VanH-E_1_AF155139
CARD	CARD|phgb|EF102240|11722-12565|ARO:3001647|OXA-97|betalactams|Class_D_betalactamases|OXA	@phgb|EF102240|11722-12565|ARO:3001647|OXA-97 [Acinetobacter baumannii]
NCBI	CARD|phgb|EF102240|11722-12565|ARO:3001647|OXA-97|betalactams|Class_D_betalactamases|OXA	gi|132252055|gb|EF102240.1|11723-12566
ARG-ANNOT	AGly|Aph3-Vb|M22126|373-1164|792|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-Vb:M22126:373-1164:792
CARD	AGly|Aph3-Vb|M22126|373-1164|792|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|M22126|372-1164|ARO:3002650|APH(3')-Vb [Streptomyces ribosidificus]
NCBI	AGly|Aph3-Vb|M22126|373-1164|792|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|153434|gb|M22126.1|STMRPHA|373-1164
Resfinder	AGly|Aph3-Vb|M22126|373-1164|792|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-Vb_1_M22126
ARG-ANNOT	AGly|Aac2-Ie|NC_011896|3039059-3039607|549|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	(AGly)Aac2-Ie:NC_011896:3039059-3039607:549
NCBI	AGly|Aac2-Ie|NC_011896|3039059-3039607|549|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	gi|219932450|emb|FM211192.1|3039059-3039607 gi|1377782|gb|L78819.1|MSGB912CS|22407-21859 gi|13093786|emb|AL583926.1|40192-40740
Resfinder	AGly|Aac2-Ie|NC_011896|3039059-3039607|549|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	aac(2')-Ie_1_NC_011896
ARG-ANNOT	Bla|VIM-14|EF055455|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-14:EF055455:1-801:801
NCBI	Bla|VIM-14|EF055455|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|118138664|gb|EF055455.1|1-801
CARD	CARD|phgb|U00096|2098446-2099613|ARO:3003577|PmrE|Cationic_antimicrobial_peptides|Lipid_A_modification|PMRC	@phgb|U00096|2098446-2099613|ARO:3003577|PmrE [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|2098446-2099613|ARO:3003577|PmrE|Cationic_antimicrobial_peptides|Lipid_A_modification|PMRC	gi|985000614|gb|CP014225.1|295646-296813 gi|958627747|gb|CP013253.1|1317821-1316654 gi|939732440|gb|CP011343.2|2078605-2079772 gi|939731527|gb|CP011342.2|2079301-2080468 gi|937526251|gb|CP012870.1|2543207-2542040 gi|937521852|gb|CP012869.1|2543207-2542040 gi|937517453|gb|CP012868.1|2543207-2542040 gi|932857508|emb|LN877770.1|2462669-2463836 gi|923416119|gb|CP011113.1|2061310-2062477 gi|899729770|gb|CP012127.1|2079639-2080806
NCBI	1199|JN118546.1|JN118546|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|667671718|gb|KF468749.1|1547-2332 gi|667671714|gb|KF468748.1|1535-2320 gi|667671697|gb|KF468743.1|2165-2950 gi|551485251|gb|KF525328.1|398-1183 gi|402748691|gb|JX195556.1|111-896 gi|383216584|gb|JQ407409.1|2763-3548 gi|359743183|gb|JN106164.1|22643-23428 gi|355336852|gb|JN118546.1|748-1533 gi|351214313|gb|HQ170513.2|3185-3970 gi|300391784|gb|HM175875.1|715-1500
ARG-ANNOT	gi|239909268|gb|GQ149243.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-74:GQ149243:1-873:873
CARD	gi|239909268|gb|GQ149243.1|betalactams|Class_A_betalactamases|CTX	@phgb|GQ149243|0-873|ARO:3001935|CTX-M-74 [Enterobacter cloacae]
Lahey	gi|239909268|gb|GQ149243.1|betalactams|Class_A_betalactamases|CTX	ACS32293.1 GQ149243.1:1-873
NCBI	gi|239909268|gb|GQ149243.1|betalactams|Class_A_betalactamases|CTX	gi|239909268|gb|GQ149243.1|1-873
Resfinder	gi|239909268|gb|GQ149243.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-74_1_GQ149243
CARD	CARD|phgb|JX017365|244-1120|ARO:3001989|CTX-M-130|betalactams|Class_A_betalactamases|CTX	@phgb|JX017365|244-1120|ARO:3001989|CTX-M-130 [Escherichia coli]
NCBI	CARD|phgb|JX017365|244-1120|ARO:3001989|CTX-M-130|betalactams|Class_A_betalactamases|CTX	gi|387165738|gb|JX017365.1|245-1121
CARD	1854|AB983359.1|AB983359|betalactams|Class_D_betalactamases|OXA	@phgb|AB983359|2425-3268|ARO:3003116|OXA-420 [Acinetobacter baumannii]
Lahey	1854|AB983359.1|AB983359|betalactams|Class_D_betalactamases|OXA	BAP28835.1 AB983359.1:2426-3268
NCBI	1854|AB983359.1|AB983359|betalactams|Class_D_betalactamases|OXA	gi|673921363|dbj|AB983359.1|2426-3268
CARD	Bla|OXA-350_1_KF297579|betalactams|Class_D_betalactamases|OXA	@phgb|KF297579|0-822|ARO:3001537|OXA-350 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-350_1_KF297579|betalactams|Class_D_betalactamases|OXA	AGW83448.1 KF297579.1:1-822
NCBI	Bla|OXA-350_1_KF297579|betalactams|Class_D_betalactamases|OXA	gi|546237211|gb|KF297579.1|1-822
Resfinder	Bla|OXA-350_1_KF297579|betalactams|Class_D_betalactamases|OXA	blaOXA-350_1_KF297579
ARG-ANNOT	Bla|CMY-36|EU331426|2375-3520|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-36:EU331426:2375-3520:1146
Lahey	Bla|CMY-36|EU331426|2375-3520|1146|betalactams|Class_C_betalactamases|CMY	ABY58049.1 EU331426.1:2375-3520
NCBI	Bla|CMY-36|EU331426|2375-3520|1146|betalactams|Class_C_betalactamases|CMY	gi|164470425|gb|EU331426.1|2375-3520 gi|695197801|ref|NG_034811.1|1-1146
Resfinder	Bla|CMY-36|EU331426|2375-3520|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-36_1_EU331426
ARG-ANNOT	Bla|OCH-6|AJ295344|1-1173|1173|betalactams|Class_C_betalactamases|OCH	(Bla)OCH-6:AJ295344:1-1173:1173
CARD	Bla|OCH-6|AJ295344|1-1173|1173|betalactams|Class_C_betalactamases|OCH	@phgb|AJ295344|0-1173|ARO:3002519|OCH-6 [Ochrobactrum anthropi]
NCBI	Bla|OCH-6|AJ295344|1-1173|1173|betalactams|Class_C_betalactamases|OCH	gi|11544706|emb|AJ295344.1|1-1173
Resfinder	Bla|OCH-6|AJ295344|1-1173|1173|betalactams|Class_C_betalactamases|OCH	blaOCH-6_1_AJ295344
ARG-ANNOT	Gly|VanC|AF162694|1411-2442|1032|Glycopeptides|VanC-type_resistance_protein|VANC	(Gly)VanC:AF162694:1411-2442:1032
CARD	Gly|VanC|AF162694|1411-2442|1032|Glycopeptides|VanC-type_resistance_protein|VANC	@phgb|AF162694|1410-2442|ARO:3000368|vanC [Enterococcus gallinarum]
NCBI	Gly|VanC|AF162694|1411-2442|1032|Glycopeptides|VanC-type_resistance_protein|VANC	gi|161779896|gb|EU151771.1|31-1062 gi|9294728|gb|AF162694.1|AF162694|1411-2442 gi|577156305|gb|KF849246.1|1-495 gi|58045581|gb|AY870596.1|4-430 gi|58045583|gb|AY870597.1|1-402 gi|58045587|gb|AY870599.1|1-387
Resfinder	Gly|VanC|AF162694|1411-2442|1032|Glycopeptides|VanC-type_resistance_protein|VANC	VanC_1_AF162694
ARG-ANNOT	AGly|Aph6-Ib|X05648|382-1305|924|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	(AGly)Aph6-Ib:X05648:382-1305:924
CARD	AGly|Aph6-Ib|X05648|382-1305|924|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	@phgb|X05648|381-1305|ARO:3002658|APH(6)-Ib [Streptomyces glaucescens]
NCBI	AGly|Aph6-Ib|X05648|382-1305|924|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|692319829|gb|CP009438.1|289161-288238 gi|3256042|emb|AJ006985.1|12709-11786 gi|47104|emb|X05648.1|382-1305 gi|286143455|gb|GU384078.1|1-534
Resfinder	AGly|Aph6-Ib|X05648|382-1305|924|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	aph(6)-Ib_1_X05648
ARG-ANNOT	Bla|GES-4|AB116260|1330-2193|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-4:AB116260:1330-2193:864
CARD	Bla|GES-4|AB116260|1330-2193|864|betalactams|Class_A_betalactamases|GES	@phgb|AB116260|1329-2193|ARO:3002333|GES-4 [Klebsiella pneumoniae]
Lahey	Bla|GES-4|AB116260|1330-2193|864|betalactams|Class_A_betalactamases|GES	BAD08689.1 AB116260.1:1330-2193
NCBI	Bla|GES-4|AB116260|1330-2193|864|betalactams|Class_A_betalactamases|GES	gi|42543942|dbj|AB116723.1|1330-2193 gi|42391697|dbj|AB116260.1|1330-2193
Resfinder	Bla|GES-4|AB116260|1330-2193|864|betalactams|Class_A_betalactamases|GES	blaGES-4_1_AB116723
CARD	CARD|phgb|AF155139|3396-4278|ARO:3002958|vanYF|Glycopeptides|VanF-type_accessory_protein|VANYF	@phgb|AF155139|3396-4278|ARO:3002958|vanYF [Paenibacillus popilliae ATCC 14706]
NCBI	CARD|phgb|AF155139|3396-4278|ARO:3002958|vanYF|Glycopeptides|VanF-type_accessory_protein|VANYF	gi|40363824|gb|AF155139.2|3397-4279 gi|33312477|gb|AF432143.1|2193-2418
CARD	Gly|VanS-C_1_AF162694|Glycopeptides|VanC-type_regulator|VANSC	@phgb|AF162694|5877-6963|ARO:3002933|vanSC [Enterococcus gallinarum]
NCBI	Gly|VanS-C_1_AF162694|Glycopeptides|VanC-type_regulator|VANSC	gi|9294728|gb|AF162694.1|AF162694|5878-6963
Resfinder	Gly|VanS-C_1_AF162694|Glycopeptides|VanC-type_regulator|VANSC	VanS-C_1_AF162694
CARD	gi|698174171|gb|KM087840.1|betalactams|Class_C_betalactamases|CMY	@phgb|KM087840|0-1146|ARO:3002127|CMY-116 [Citrobacter freundii]
Lahey	gi|698174171|gb|KM087840.1|betalactams|Class_C_betalactamases|CMY	AIT76093.1 KM087840.1:1-1146
NCBI	gi|698174171|gb|KM087840.1|betalactams|Class_C_betalactamases|CMY	gi|698174171|gb|KM087840.1|1-1146
ARG-ANNOT	AGly|Aph2-Ib|AF207840|272-1171|900|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	(AGly)Aph2-Ib:AF207840:272-1171:900
NCBI	AGly|Aph2-Ib|AF207840|272-1171|900|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	gi|10130001|gb|AF207840.1|AF207840|122-1021
CARD	Bla|KJ173478.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KJ173478|0-825|ARO:3001573|OXA-387 [Acinetobacter baumannii]
Lahey	Bla|KJ173478.1|gene1|betalactams|Class_D_betalactamases|OXA	AHK51384.1 KJ173478.1:1-825
NCBI	Bla|KJ173478.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|589062373|gb|KJ173478.1|1-825
NCBI	Bla|MAL-1_2_AJ609506|betalactams|Class_A_betalactamases|MAL	gi|38601955|emb|AJ609506.1|1-903
Resfinder	Bla|MAL-1_2_AJ609506|betalactams|Class_A_betalactamases|MAL	blaMAL-1_2_AJ609506
NCBI	1613|AY740681.1|AY740681|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|406507747|gb|JX128136.1|469-1284 gi|388837265|gb|JQ837993.1|709-1524 gi|52858431|gb|AY740681.1|715-1530
CARD	Mdr|NC_010400.5986505|Multi-drug_resistance|MDR_regulator|MEXT	@phgb|NC_010400|2206451-2207441|ARO:3000814|mexT [Acinetobacter baumannii SDF]
NCBI	Mdr|NC_010400.5986505|Multi-drug_resistance|MDR_regulator|MEXT	gi|169150821|emb|CU468230.2|2206452-2207441
ARG-ANNOT	Bla|ZEG-1|AY265891|1-1013|1013|betalactams|Class_C_betalactamases|ACT	(Bla)ZEG-1:AY265891:1-1013:1013
NCBI	Bla|ZEG-1|AY265891|1-1013|1013|betalactams|Class_C_betalactamases|ACT	gi|33089937|gb|AY265891.1|1-1013
Resfinder	Bla|ZEG-1|AY265891|1-1013|1013|betalactams|Class_C_betalactamases|ACT	blaZEG-1_1_AY265891
NCBI	Bla|SHV-11_4_EF035558|betalactams|Class_A_betalactamases|SHV	gi|970339223|gb|CP013711.1|4593419-4592559 gi|562889804|gb|KF585136.1|48-908 gi|259089732|gb|GQ463148.1|3276-4136 gi|259089723|gb|GQ463147.1|3276-4136 gi|150953431|gb|CP000647.1|1785004-1784144 gi|85003006|gb|DQ166779.3|1-861
Resfinder	Bla|SHV-11_4_EF035558|betalactams|Class_A_betalactamases|SHV	blaSHV-11_4_EF035558
CARD	CARD|phgb|M35190|0-624|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|M35190|0-624|ARO:3002670|cat [Campylobacter coli]
NCBI	CARD|phgb|M35190|0-624|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|325656975|gb|HQ207194.1|1303-680 gi|55233208|gb|AY786076.1|1973-2596 gi|144188|gb|M35190.1|CAJCAT|309-932
Resfinder	CARD|phgb|M35190|0-624|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	cat_2_M35190
CARD	Tmt|DfrA15_1_HM449019|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|KF534911|39-513|ARO:3003013|dfrA15 [Escherichia coli]
NCBI	Tmt|DfrA15_1_HM449019|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|970861142|gb|KT449571.1|79-552 gi|944545011|gb|KR868993.1|90-563 gi|924421174|gb|KP998196.1|54-527 gi|751372775|gb|KM823524.1|110-583 gi|726966106|gb|KM386400.1|119-592 gi|726966104|gb|KM386399.1|119-592 gi|659224521|gb|KJ668708.1|234-707 gi|633894420|emb|HG918041.1|151302-150829 gi|563324876|gb|KF534911.1|40-513 gi|481190437|gb|JX121641.1|52261-52734
Resfinder	Tmt|DfrA15_1_HM449019|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA15_1_HM449019
ARG-ANNOT	254|AF090987.1|AF090987|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	(Tet)Tet-30:AF090987:1130-2314:1185
CARD	254|AF090987.1|AF090987|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	@phgb|AF090987|0-1185|ARO:3000561|tet30 [Agrobacterium tumefaciens str. C58]
NCBI	254|AF090987.1|AF090987|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|159140696|gb|AE007870.2|1328325-1329509 gi|3860030|gb|AF090987.1|AF090987|1130-2314
Resfinder	254|AF090987.1|AF090987|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tet(30)_1_AF090987
CARD	CARD|pvgb|NC_007779|3172159-3174052|ARO:3003316|Escherichia|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|parE|RequiresSNPConfirmation	@pvgb|NC_007779|3172159-3174052|ARO:3003316|Escherichia coli parE conferring resistance to fluoroquinolones [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|pvgb|NC_007779|3172159-3174052|ARO:3003316|Escherichia|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|parE|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|1370704-1372597 gi|958627747|gb|CP013253.1|249828-247935 gi|939732440|gb|CP011343.2|3148576-3150469 gi|939731527|gb|CP011342.2|3149321-3151214 gi|937526251|gb|CP012870.1|1468152-1466259 gi|937521852|gb|CP012869.1|1468152-1466259 gi|937517453|gb|CP012868.1|1468152-1466259 gi|932857508|emb|LN877770.1|3997835-3999728 gi|923416119|gb|CP011113.1|3130222-3132115 gi|899729770|gb|CP012127.1|3147950-3149843
ARG-ANNOT	Bla|OKP-B-20|AM850922|25-885|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-20:AM850922:25-885:861
CARD	Bla|OKP-B-20|AM850922|25-885|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM850922|24-885|ARO:3002453|OKP-B-20 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-20|AM850922|25-885|861|betalactams|Class_A_betalactamases|OKP	gi|197724677|emb|AM850922.2|25-885
Resfinder	Bla|OKP-B-20|AM850922|25-885|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-20_1_AM850922
ARG-ANNOT	Flq|norA|D90119|478-1644|1167|Fluoroquinolones|Quinolone_active_efflux|NORA	(Flq)norA:D90119:478-1644:1167
NCBI	Flq|norA|D90119|478-1644|1167|Fluoroquinolones|Quinolone_active_efflux|NORA	gi|984671414|emb|LT009690.1|730498-731664 gi|930584899|dbj|AP014942.1|715546-716712 gi|929858715|gb|CP010402.1|730137-731303 gi|927048389|gb|CP010890.1|698652-699818 gi|925190036|gb|CP012593.1|751753-752919 gi|777211012|emb|LN831036.1|734623-735789 gi|595636499|gb|CP007454.1|420913-419747 gi|408436493|emb|HE579073.1|721034-722200 gi|408434508|emb|HE579071.1|720985-722151 gi|408432519|emb|HE579069.1|721113-722279
CARD	1574|LC031883.1|LC031883|betalactams|Class_D_betalactamases|OXA	@phgb|KF711993|0-801|ARO:3001807|OXA-246 [Pseudomonas aeruginosa]
Lahey	1574|LC031883.1|LC031883|betalactams|Class_D_betalactamases|OXA	AHC31001.1 KF711993.1:1-801
NCBI	1574|LC031883.1|LC031883|betalactams|Class_D_betalactamases|OXA	gi|765098769|dbj|LC031883.1|8894-9694 gi|566035149|gb|KF711993.1|1-801 gi|300391784|gb|HM175875.1|3118-3918 gi|285028553|gb|GU367339.1|149-949 gi|208436682|gb|EU886980.1|3582-4382
Resfinder	1574|LC031883.1|LC031883|betalactams|Class_D_betalactamases|OXA	blaOXA-10_1_HM175875
CARD	CARD|phgb|AL123456|314308-314854|ARO:3002525|AAC2-PRIME-Ic|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	@phgb|AL123456|314308-314854|ARO:3002525|AAC(2')-Ic [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|phgb|AL123456|314308-314854|ARO:3002525|AAC2-PRIME-Ic|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	gi|984994143|gb|CP010340.1|314755-315301 gi|984989958|gb|CP010339.1|314436-314982 gi|984985728|gb|CP010338.1|314506-315052 gi|984981517|gb|CP010337.1|314501-315047 gi|984976917|gb|CP010336.1|312562-313108 gi|984972452|gb|CP010335.1|313919-314465 gi|984967653|gb|CP010334.1|309336-309882 gi|984963331|gb|CP010333.1|313027-313573 gi|984954355|gb|CP010331.1|312541-313087 gi|984950177|gb|CP010330.1|314307-314853
ARG-ANNOT	Flq|QnrB43|JQ349151|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB43:JQ349151:1-680:680
CARD	Flq|QnrB43|JQ349151|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JQ349151|0-680|ARO:3002758|QnrB43 [Escherichia coli]
NCBI	Flq|QnrB43|JQ349151|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|375332206|gb|JQ349151.1|1-680
Resfinder	Flq|QnrB43|JQ349151|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB43_1_AFA52643
NCBI	Flq|CP002695.1|gene1275|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|973420427|gb|CP010966.1|1315475-1317790 gi|973416827|gb|CP010965.1|2742169-2739854 gi|937412521|gb|CP011401.1|2734411-2732096 gi|937409066|gb|CP011400.1|1030858-1033173 gi|937404317|gb|CP011448.1|1315474-1317789 gi|937400854|gb|CP011447.1|1315484-1317799 gi|937393878|gb|CP011446.1|1314428-1316743 gi|937390412|gb|CP011445.1|1313376-1315691 gi|937386949|gb|CP011444.1|1314411-1316726 gi|937383491|gb|CP011443.1|2741134-2738819
NCBI	Sul|NC_002951.3237126|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|610395799|gb|CP007539.1|567692-568495 gi|57284222|gb|CP000046.1|568249-569052
CARD	CARD|phgb|KP109675|1328-2201|ARO:3003716|CPS-1|betalactams|Class_B_betalactamases|CPS	@phgb|KP109675|1328-2201|ARO:3003716|CPS-1 [Chryseobacterium sp. Stok-1]
NCBI	CARD|phgb|KP109675|1328-2201|ARO:3003716|CPS-1|betalactams|Class_B_betalactamases|CPS	gi|762020382|gb|KP109675.1|1329-2201
CARD	CARD|phgb|L20573|297-1218|ARO:3002987|bcrA|Bacitracin|Bacitracin_ABC_transporter|BCRA	@phgb|L20573|297-1218|ARO:3002987|bcrA [Bacillus licheniformis]
NCBI	CARD|phgb|L20573|297-1218|ARO:3002987|bcrA|Bacitracin|Bacitracin_ABC_transporter|BCRA	gi|510140713|gb|CP005965.1|2577060-2576139 gi|466477|gb|L20573.1|BACBCRABC|298-1219 gi|387912606|gb|JQ315400.1|784-1
ARG-ANNOT	Bla|SHV-45|HQ877612|1-715|715|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-45:HQ877612:1-715:715
NCBI	Bla|SHV-45|HQ877612|1-715|715|betalactams|Class_A_betalactamases|SHV	gi|340523207|gb|HQ877611.1|1-715 gi|23664425|gb|AF547625.1|1-714
NCBI	MLS|ermT_3_AF310974|MLS|23S_rRNA_methyltransferases|ERMT	gi|11527992|gb|AF310974.1|934-1668
Resfinder	MLS|ermT_3_AF310974|MLS|23S_rRNA_methyltransferases|ERMT	erm(T)_3_AF310974
ARG-ANNOT	gi|11037698|gb|AF300454.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-3:GU966683:80-880:801
CARD	gi|11037698|gb|AF300454.1|betalactams|Class_B_betalactamases|VIM	@phgb|AF300454|0-801|ARO:3002273|VIM-3 [Pseudomonas aeruginosa]
Lahey	gi|11037698|gb|AF300454.1|betalactams|Class_B_betalactamases|VIM	AAG27703.1 AF300454.1:1-801
NCBI	gi|11037698|gb|AF300454.1|betalactams|Class_B_betalactamases|VIM	gi|294959328|gb|GU966683.1|80-880 gi|126635811|gb|EF138817.1|5047-5847 gi|156628070|gb|EU090799.1|103-903 gi|87128426|gb|DQ342344.1|527-1327 gi|88911245|gb|DQ393784.1|1115-1915 gi|11037698|gb|AF300454.1|AF300454|1-801
Resfinder	gi|11037698|gb|AF300454.1|betalactams|Class_B_betalactamases|VIM	blaVIM-3_1_AF300454
NCBI	724|AJ223604.1|AJ223604|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|294959328|gb|GU966683.1|1450-2004 gi|695221081|ref|NG_039605.1|7564-8118 gi|126635811|gb|EF138817.1|6417-6971 gi|156628070|gb|EU090799.1|1473-2027 gi|88911245|gb|DQ393784.1|2485-3039 gi|4210822|emb|AJ223604.1|2371-2925 gi|1435171|emb|X98393.1|2049-2603
ARG-ANNOT	233|unknown_id|unknown_name|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULIII	(Sul)SulIII:HQ875016:7396-8187:792
NCBI	233|unknown_id|unknown_name|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULIII	gi|937637492|gb|KT334335.1|91094-91885 gi|928083869|gb|CP012682.1|70405-71196 gi|917657445|gb|KR827684.1|48617-47826 gi|909636816|emb|LN850165.1|102538-101747 gi|909636430|emb|LN850162.1|7225-6434 gi|820773184|gb|KM877269.1|91104-91895 gi|828971497|gb|CP011644.1|32343-31552 gi|754341646|gb|CP010575.1|16636-15845 gi|665822573|gb|KJ484634.1|8382-7591 gi|660582175|gb|CP008798.1|17260-16469
Resfinder	233|unknown_id|unknown_name|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULIII	sul3_2_AJ459418
ARG-ANNOT	1619|AY740681.1|AY740681|betalactams|Class_A_betalactamases|PER	(Bla)PER-3:AY740681:7103-8029:927
CARD	1619|AY740681.1|AY740681|betalactams|Class_A_betalactamases|PER	@phgb|AY740681|7102-8029|ARO:3002365|PER-3 [Aeromonas caviae]
Lahey	1619|AY740681.1|AY740681|betalactams|Class_A_betalactamases|PER	AAU89132.1 AY740681.1:7103-8029
NCBI	1619|AY740681.1|AY740681|betalactams|Class_A_betalactamases|PER	gi|953271753|gb|KT175908.1|2245-3171 gi|406507747|gb|JX128136.1|5982-6908 gi|52858431|gb|AY740681.1|7103-8029
Resfinder	1619|AY740681.1|AY740681|betalactams|Class_A_betalactamases|PER	blaPER-3_1_AY740681
ARG-ANNOT	AGly|Aac6-Ik|L29510|369-806|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Ik:L29510:369-806:438
CARD	AGly|Aac6-Ik|L29510|369-806|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|L29510|368-806|ARO:3002558|AAC(6')-Ik [Acinetobacter sp. CIP-A165]
NCBI	AGly|Aac6-Ik|L29510|369-806|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|847646|gb|L29510.1|ACCAAC6IK|369-806
Resfinder	AGly|Aac6-Ik|L29510|369-806|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Ik_1_L29510
ARG-ANNOT	Bla|SHV-168|JX870080|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-168:JX870080:1-861:861
CARD	Bla|SHV-168|JX870080|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|JX870080|0-861|ARO:3001352|SHV-168 [Klebsiella pneumoniae]
Lahey	Bla|SHV-168|JX870080|1-861|861|betalactams|Class_A_betalactamases|SHV	AFW16978.1 JX870080.1:1-861
NCBI	Bla|SHV-168|JX870080|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|411178359|gb|JX870080.1|1-861
Resfinder	Bla|SHV-168|JX870080|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-168_1_JX870080
CARD	gi|306773837|dbj|AB587082.1|betalactams|Class_C_betalactamases|CMY	@phgb|AB587082|0-1188|ARO:3002069|CMY-59 [Escherichia coli]
NCBI	gi|306773837|dbj|AB587082.1|betalactams|Class_C_betalactamases|CMY	gi|306773837|dbj|AB587082.1|1-1188
ARG-ANNOT	Bla|CTX-M-5|JN003855|131-1007|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-5:JN003855:131-1007:876
CARD	Bla|CTX-M-5|JN003855|131-1007|876|betalactams|Class_A_betalactamases|CTX	@phgb|U95364|5-881|ARO:3001868|CTX-M-5 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	Bla|CTX-M-5|JN003855|131-1007|876|betalactams|Class_A_betalactamases|CTX	AAC32890.1 U95364.1:6-881
NCBI	Bla|CTX-M-5|JN003855|131-1007|876|betalactams|Class_A_betalactamases|CTX	gi|397001530|gb|JX017309.1|7002-7877 gi|397001520|gb|JX017308.1|7003-7878 gi|397001506|gb|JX017307.1|11178-12053 gi|397001496|gb|JX017306.1|6225-7100 gi|343457000|gb|JN003855.1|132-1007 gi|10946250|gb|AF286192.1|986-1861 gi|6580516|emb|AJ251722.1|1-876 gi|2443464|gb|U95364.1|STU95364|6-881
Resfinder	Bla|CTX-M-5|JN003855|131-1007|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-5_6_AF286192
ARG-ANNOT	Bla|GOB-2|AF189296|1-756|756|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-2:AF189296:1-756:756
NCBI	Bla|GOB-2|AF189296|1-756|756|betalactams|Class_B_betalactamases|GOB	gi|9587051|gb|AF189296.1|AF189296|1-756
Resfinder	Bla|GOB-2|AF189296|1-756|756|betalactams|Class_B_betalactamases|GOB	blaGOB-2_1_AF189296
ARG-ANNOT	Gly|VanX-Ao1|AF060799|2604-3212|609|Glycopeptides|VanA-type_resistance_protein|VANXA	(Gly)VanX-Ao1:AF060799:2604-3212:609
NCBI	Gly|VanX-Ao1|AF060799|2604-3212|609|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|4405960|gb|AF060799.1|AF060799|2604-3212
Resfinder	Gly|VanX-Ao1|AF060799|2604-3212|609|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-Ao1_8_AF060799
NCBI	MLS|msrD_3_AF227520|MLS|Macrolide_resistance_efflux_pumps|MSRD	gi|301800973|emb|FQ312029.1|887331-888794 gi|50902420|gb|CP000003.1|1167421-1165958 gi|50261575|gb|AY657002.1|4608-6071 gi|40218525|gb|AY445042.1|10960-12423 gi|18478326|gb|AF227521.1|4607-6070 gi|10119923|gb|AF227520.1|AF227520|4591-6054
Resfinder	MLS|msrD_3_AF227520|MLS|Macrolide_resistance_efflux_pumps|MSRD	msr(D)_3_AF227520
CARD	CARD|phgb|NC_003098|1886035-1888501|ARO:3003044|PBP1b|betalactams|Penicillin_binding_protein|PBP1B	@phgb|NC_003098|1886035-1888501|ARO:3003044|PBP1b [Streptococcus pneumoniae R6]
NCBI	CARD|phgb|NC_003098|1886035-1888501|ARO:3003044|PBP1b|betalactams|Penicillin_binding_protein|PBP1B	gi|25307955|gb|AE007317.1|1886036-1888502 gi|116075884|gb|CP000410.1|1893568-1896034 gi|2982641|emb|AJ002291.1|2511-45 gi|6165961|gb|AF101781.1|AF101781|2466-1
CARD	CARD|phgb|AB498758|3738-5762|ARO:3003440|mecB|betalactams|Penicillin_binding_protein|MECB	@phgb|AB498758|3738-5762|ARO:3003440|mecB [Macrococcus caseolyticus]
NCBI	CARD|phgb|AB498758|3738-5762|ARO:3003440|mecB|betalactams|Penicillin_binding_protein|MECB	gi|291461500|dbj|AB498758.1|3738-5762 gi|291461463|dbj|AB498756.1|4347-6371 gi|222121345|dbj|AP009486.1|25508-27532
CARD	Bla|GES-3_1_AB113580|betalactams|Class_A_betalactamases|GES	@phgb|AB113580|1329-2193|ARO:3002332|GES-3 [Klebsiella pneumoniae]
Lahey	Bla|GES-3_1_AB113580|betalactams|Class_A_betalactamases|GES	BAD06399.1 AB113580.1:1330-2193
NCBI	Bla|GES-3_1_AB113580|betalactams|Class_A_betalactamases|GES	gi|40645552|dbj|AB113580.1|1330-2193
Resfinder	Bla|GES-3_1_AB113580|betalactams|Class_A_betalactamases|GES	blaGES-3_1_AB113580
NCBI	Mdr|NC_010400.5984910|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXE	gi|169150821|emb|CU468230.2|1370342-1369125
NCBI	Bla|mecA_6_FR821779|betalactams|Penicillin_binding_protein|PBP2	gi|871340505|gb|KT192641.1|1-1998 gi|657406205|emb|LK024544.1|6531-4534 gi|452754752|emb|HF569116.1|3738-1741 gi|344176319|emb|FR821779.1|37678-35681 gi|375313938|gb|JN794592.1|1-313
Resfinder	Bla|mecA_6_FR821779|betalactams|Penicillin_binding_protein|PBP2	mecA_6_FR821779
NCBI	AGly|M86913.1|gene3|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|927928831|gb|KP754011.1|2104-2895 gi|331029077|gb|HQ386829.1|1547-2338 gi|695226656|ref|NG_041554.1|8007-8798 gi|374081727|emb|AM991328.2|685-1476 gi|317464132|gb|CP002446.1|3077511-3076720 gi|297787483|gb|GU585907.1|26909-26118 gi|695221349|ref|NG_039719.1|5499-6290 gi|207097977|gb|FJ042875.1|643-1434 gi|145284438|gb|EF527229.1|684-1475 gi|119698214|gb|EF051039.1|4097-4888
ARG-ANNOT	569|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANWA	(Gly)VanZ-Pa:DQ018711:2047-2862:816
NCBI	569|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANWA	gi|66731642|gb|DQ018711.1|2047-2862
Resfinder	569|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANWA	VanW-Pt_2_DQ018711
CARD	Bla|OXA-325_1_KF203099|betalactams|Class_D_betalactamases|OXA	@phgb|KF203099|0-822|ARO:3001513|OXA-325 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-325_1_KF203099|betalactams|Class_D_betalactamases|OXA	AGW16407.1 KF203099.1:1-822
NCBI	Bla|OXA-325_1_KF203099|betalactams|Class_D_betalactamases|OXA	gi|544207397|gb|KF203099.1|1-822
Resfinder	Bla|OXA-325_1_KF203099|betalactams|Class_D_betalactamases|OXA	blaOXA-325_1_KF203099
CARD	CARD|pvgb|NC_002516.2|1043982-1045314|ARO:3003686|oprD|betalactams|Mutant_porin_proteins|OPRD|RequiresSNPConfirmation	@pvgb|NC_002516.2|1043982-1045314|ARO:3003686|oprD [Pseudomonas aeruginosa PAO1]
NCBI	CARD|pvgb|NC_002516.2|1043982-1045314|ARO:3003686|oprD|betalactams|Mutant_porin_proteins|OPRD|RequiresSNPConfirmation	gi|974347073|gb|CP008869.1|1264643-1265974 gi|974261848|gb|CP008858.1|616525-617856 gi|926451317|emb|LN871187.1|4471863-4470532 gi|675286744|emb|HG974234.1|899225-900556 gi|553895034|gb|CP006832.1|1043983-1045314 gi|553886202|gb|CP006831.1|1043983-1045314 gi|543879514|gb|CP006705.1|1043862-1045193 gi|110227054|gb|AE004091.2|1043983-1045314 gi|45372|emb|Z14065.1|2067-736 gi|45370|emb|X63152.1|2067-736
ARG-ANNOT	550|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-18:EU503121:2921-3748:828
CARD	550|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	@phgb|U85514|149-977|ARO:3001413|OXA-18 [Pseudomonas aeruginosa]
Lahey	550|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	AAB58555.1 U85514.1:150-977
NCBI	550|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	gi|209981013|gb|EU503121.1|2921-3748 gi|2149410|gb|U85514.1|PAU85514|150-977
Resfinder	550|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	blaOXA-18_1_EU503121
ARG-ANNOT	Bla|IMP-35|JF816544|1-741|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-35:JF816544:1-741:741
CARD	Bla|IMP-35|JF816544|1-741|741|betalactams|Class_B_betalactamases|IMP	@phgb|JF816544|0-741|ARO:3002226|IMP-35 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-35|JF816544|1-741|741|betalactams|Class_B_betalactamases|IMP	AFO59566.1 JF816544.1:1-741
NCBI	Bla|IMP-35|JF816544|1-741|741|betalactams|Class_B_betalactamases|IMP	gi|350285632|gb|JF816544.1|1-741
Resfinder	Bla|IMP-35|JF816544|1-741|741|betalactams|Class_B_betalactamases|IMP	blaIMP-35_1_JF816544
NCBI	1507|unknown_id|unknown_name|MLS|Macrolide_phosphotransferases|MPHE	gi|974022331|gb|CP013924.1|1450317-1451201 gi|971497742|gb|CP012903.1|45819-46703 gi|971497538|gb|CP012902.1|49064-48180 gi|971493847|gb|CP010351.1|365798-364914 gi|971493847|gb|CP010351.1|386132-386036 gi|969995310|gb|KT317086.1|19611-20495 gi|969995276|gb|KT317085.1|31720-32604 gi|969995259|gb|KT317079.1|12398-13282 gi|969995242|gb|KT317078.1|14284-15168 gi|969995220|gb|KT317076.1|15259-16143 gi|969995200|gb|KT317075.1|17145-18029
Resfinder	1507|unknown_id|unknown_name|MLS|Macrolide_phosphotransferases|MPHE	mph(E)_3_EU294228
ARG-ANNOT	Bla|SHV-33|AY037779|89-949|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-33:AY037779:89-949:861
CARD	Bla|SHV-33|AY037779|89-949|861|betalactams|Class_A_betalactamases|SHV	@phgb|JX268631|0-861|ARO:3001091|SHV-33 [Klebsiella pneumoniae]
Lahey	Bla|SHV-33|AY037779|89-949|861|betalactams|Class_A_betalactamases|SHV	AAK69829.1 AY037779.1:89-949
NCBI	Bla|SHV-33|AY037779|89-949|861|betalactams|Class_A_betalactamases|SHV	gi|396076801|gb|JX268631.1|1-861 gi|15721852|gb|AY037779.1|89-949
Resfinder	Bla|SHV-33|AY037779|89-949|861|betalactams|Class_A_betalactamases|SHV	blaSHV-33_1_AY037779
ARG-ANNOT	gi|298113031|gb|HM113564.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-178:HM113564:1-825:825
CARD	gi|298113031|gb|HM113564.1|betalactams|Class_D_betalactamases|OXA	@phgb|HM113564|0-825|ARO:3001472|OXA-178 [Acinetobacter baumannii]
Lahey	gi|298113031|gb|HM113564.1|betalactams|Class_D_betalactamases|OXA	ADI58622.1 HM113564.1:1-825
NCBI	gi|298113031|gb|HM113564.1|betalactams|Class_D_betalactamases|OXA	gi|298113031|gb|HM113564.1|1-825
Resfinder	gi|298113031|gb|HM113564.1|betalactams|Class_D_betalactamases|OXA	blaOXA-178_1_HM113564
CARD	CARD|phgb|JQ727667|0-870|ARO:3000825|robA|Multi-drug_resistance|MDR_regulator|ROBA	@phgb|JQ727667|0-870|ARO:3000825|robA [Enterobacter cloacae]
NCBI	CARD|phgb|JQ727667|0-870|ARO:3000825|robA|Multi-drug_resistance|MDR_regulator|ROBA	gi|387965693|gb|JQ727667.1|1-870
ARG-ANNOT	Bla|cfxA5|AY769934|28-993|966|betalactams|Class_A_betalactamases|CFX	(Bla)cfxA5:AY769934:28-993:966
CARD	Bla|cfxA5|AY769934|28-993|966|betalactams|Class_A_betalactamases|CFX	@phgb|AY769934|27-993|ARO:3003096|CfxA5 [Parabacteroides distasonis]
NCBI	Bla|cfxA5|AY769934|28-993|966|betalactams|Class_A_betalactamases|CFX	gi|54660104|gb|AY769934.1|28-993 gi|209570231|emb|AM940012.1|1-921
Resfinder	Bla|cfxA5|AY769934|28-993|966|betalactams|Class_A_betalactamases|CFX	cfxA5_1_AY769934
ARG-ANNOT	Bla|OXA-251|JN118546|1762-2562|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-251:JN118546::1762-2562:801
CARD	Bla|OXA-251|JN118546|1762-2562|801|betalactams|Class_D_betalactamases|OXA	@phgb|JN118546|1761-2562|ARO:3001500|OXA-251 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-251|JN118546|1762-2562|801|betalactams|Class_D_betalactamases|OXA	AER57903.1 JN118546.1:1762-2562
NCBI	Bla|OXA-251|JN118546|1762-2562|801|betalactams|Class_D_betalactamases|OXA	gi|355336852|gb|JN118546.1|1762-2562
Resfinder	Bla|OXA-251|JN118546|1762-2562|801|betalactams|Class_D_betalactamases|OXA	blaOXA-251_1_JN118546
CARD	CARD|phgb|AJ634602|0-861|ARO:3000999|TEM-135|betalactams|Class_A_betalactamases|TEM	@phgb|AJ634602|0-861|ARO:3000999|TEM-135 [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	CARD|phgb|AJ634602|0-861|ARO:3000999|TEM-135|betalactams|Class_A_betalactamases|TEM	gi|667483963|gb|KJ439039.1|34644-35504 gi|667483878|gb|KJ411925.1|34644-35504 gi|300116044|dbj|AB551787.1|861-1 gi|46019644|emb|AJ634602.1|7840-8700
ARG-ANNOT	Bla|TEM-98|AF397067|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-98:AF397067:1-861:861
Lahey	Bla|TEM-98|AF397067|1-861|861|betalactams|Class_A_betalactamases|TEM	AAK85244.1 AF397067.1:1-861
NCBI	Bla|TEM-98|AF397067|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|15149327|gb|AF397067.1|AF397067|1-861
Resfinder	Bla|TEM-98|AF397067|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-97_1_AF397067
ARG-ANNOT	Bla|CTX-M-82|EU545409|81-956|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-82:EU545409:81-956:876;(Bla)CTX-M-87:EU545409:81-956:876
CARD	Bla|CTX-M-82|EU545409|81-956|876|betalactams|Class_A_betalactamases|CTX	@phgb|EU545409|80-956|ARO:3001947|CTX-M-87 [Escherichia coli]
Lahey	Bla|CTX-M-82|EU545409|81-956|876|betalactams|Class_A_betalactamases|CTX	ACB41777.1 EU545409.1:81-956
NCBI	Bla|CTX-M-82|EU545409|81-956|876|betalactams|Class_A_betalactamases|CTX	gi|695213255|ref|NG_036581.1|81-956
Resfinder	Bla|CTX-M-82|EU545409|81-956|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-87_1_EU545409
ARG-ANNOT	Bla|OXA-88|DQ392963|9-833|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-88:DQ392963:9-833:825
CARD	Bla|OXA-88|DQ392963|9-833|825|betalactams|Class_D_betalactamases|OXA	@phgb|DQ392963|8-833|ARO:3001626|OXA-88 [Acinetobacter baumannii]
Lahey	Bla|OXA-88|DQ392963|9-833|825|betalactams|Class_D_betalactamases|OXA	ABD48715.1 DQ392963.1:9-833
NCBI	Bla|OXA-88|DQ392963|9-833|825|betalactams|Class_D_betalactamases|OXA	gi|88697140|gb|DQ392963.1|9-833
Resfinder	Bla|OXA-88|DQ392963|9-833|825|betalactams|Class_D_betalactamases|OXA	blaOXA-88_1_DQ392963
ARG-ANNOT	CARD|phgb|AY928180|0-495|ARO:3002837|lnuC|MLS|Lincosamide_nucleotidyltransferases|LNUC	(MLS)LnuC:AY928180:1150-1644:495
CARD	CARD|phgb|AY928180|0-495|ARO:3002837|lnuC|MLS|Lincosamide_nucleotidyltransferases|LNUC	@phgb|AY928180|0-495|ARO:3002837|lnuC [Streptococcus agalactiae]
NCBI	CARD|phgb|AY928180|0-495|ARO:3002837|lnuC|MLS|Lincosamide_nucleotidyltransferases|LNUC	gi|63099838|gb|AY928180.1|1150-1644
Resfinder	CARD|phgb|AY928180|0-495|ARO:3002837|lnuC|MLS|Lincosamide_nucleotidyltransferases|LNUC	lnu(C)_1_AY928180
ARG-ANNOT	Tmt|DfrA12|Z21672|310-807|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA12:Z21672:310-807:498
CARD	Tmt|DfrA12|Z21672|310-807|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|KJ363320|72-570|ARO:3002858|dfrA12 [Klebsiella pneumoniae subsp. pneumoniae]
NCBI	Tmt|DfrA12|Z21672|310-807|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|984348768|gb|KT425375.1|107-604 gi|975900838|gb|CP014005.1|52145-52642 gi|971497742|gb|CP012903.1|34831-35328 gi|971497538|gb|CP012902.1|60052-59555 gi|970338578|gb|KT725789.1|87912-87415 gi|970338460|gb|KT725788.1|93172-92675 gi|970567980|dbj|LC107426.1|61-558 gi|963885563|gb|KT355691.1|155-652 gi|958108507|emb|LN824138.1|4434-4931 gi|944374648|gb|KT692982.1|73-570
Resfinder	Tmt|DfrA12|Z21672|310-807|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA12_1_AB571791
CARD	Bla|TEM-21_1_Y17582|betalactams|Class_A_betalactamases|TEM	@phgb|Y17582|0-858|ARO:3000892|TEM-21 [Klebsiella pneumoniae]
Lahey	Bla|TEM-21_1_Y17582|betalactams|Class_A_betalactamases|TEM	CAA76794.1 Y17582.1:1-858
NCBI	Bla|TEM-21_1_Y17582|betalactams|Class_A_betalactamases|TEM	gi|3282025|emb|Y17582.1|1-858 gi|2970694|gb|AF052748.1|AF052748|62-919
Resfinder	Bla|TEM-21_1_Y17582|betalactams|Class_A_betalactamases|TEM	blaTEM-21_1_Y17582
NCBI	gi|270266461|gb|GU186045.1|betalactams|Class_B_betalactamases|IND	gi|270266461|gb|GU186045.1|1-805 gi|302357573|dbj|AB563173.1|827-856
ARG-ANNOT	Bla|TEM-10|U09188|198-1005|858|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-10:U09188:198-1005:858
NCBI	Bla|TEM-10|U09188|198-1005|858|betalactams|Class_A_betalactamases|TEM	gi|484095|gb|U09188.1|KOU09188|198-1005
NCBI	gi|44894130|gb|AY536519.1|betalactams|Class_A_betalactamases|VEB	gi|44894130|gb|AY536519.1|1-1066 gi|530347473|gb|CP006657.1|152699-153763 gi|530347473|gb|CP006657.1|67625-67717 gi|695214579|ref|NG_036847.1|6046-4982 gi|695224365|ref|NG_041064.1|4703-4611 gi|260677483|gb|GQ388247.1|26590-26498 gi|169147133|emb|CU459141.1|3648664-3648756 gi|169147133|emb|CU459141.1|3652547-3652580 gi|85813394|emb|CT025832.1|54107-54015 gi|85813394|emb|CT025832.1|50224-50191
NCBI	Bla|B-3_2_AF189299|betalactams|Class_B_betalactamases|BLAB	gi|9587057|gb|AF189299.1|AF189299|1-750
Resfinder	Bla|B-3_2_AF189299|betalactams|Class_B_betalactamases|BLAB	blaB-3_2_AF189299
CARD	gi|11095169|gb|AF219127.1|betalactams|Class_B_betalactamases|IND	@phgb|AF219127|0-732|ARO:3002257|IND-2 [Chryseobacterium indologenes]
Lahey	gi|11095169|gb|AF219127.1|betalactams|Class_B_betalactamases|IND	AAG29757.1 AF219127.1:1-732
NCBI	gi|11095169|gb|AF219127.1|betalactams|Class_B_betalactamases|IND	gi|11095169|gb|AF219127.1|AF219127|1-732
Resfinder	gi|11095169|gb|AF219127.1|betalactams|Class_B_betalactamases|IND	blaIND-2_2_AF219127
ARG-ANNOT	Bla|GES-12|FN554543|1-864|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-12:FN554543:1-864:864
CARD	Bla|GES-12|FN554543|1-864|864|betalactams|Class_A_betalactamases|GES	@phgb|FN554543|0-864|ARO:3002341|GES-12 [Acinetobacter baumannii]
Lahey	Bla|GES-12|FN554543|1-864|864|betalactams|Class_A_betalactamases|GES	CBG22732.1 FN554543.1:1-864
NCBI	Bla|GES-12|FN554543|1-864|864|betalactams|Class_A_betalactamases|GES	gi|604724082|gb|KJ131499.1|5873-6736 gi|310769860|gb|HM622145.1|54-917 gi|260161321|emb|FN554543.1|1-864
Resfinder	Bla|GES-12|FN554543|1-864|864|betalactams|Class_A_betalactamases|GES	blaGES-12_1_FN554543
NCBI	gi|537366551|gb|KF305673.1|betalactams|Class_C_betalactamases|CMY	gi|537366551|gb|KF305673.1|1-1243
CARD	660|JQ808129.1|JQ808129|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|JQ808129|633-1188|ARO:3002546|AAC(6')-Ib [Klebsiella pneumoniae]
NCBI	660|JQ808129.1|JQ808129|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|970567976|dbj|LC107425.1|1894-2448 gi|958108507|emb|LN824138.1|8180-8734 gi|958102843|emb|LN824133.1|2813451-2814005 gi|957647579|dbj|AP017302.1|2608931-2609485 gi|821346297|dbj|LC054838.1|1229-1783 gi|516560780|gb|JX515588.1|180145-180699 gi|552969743|gb|KF411137.1|441-995 gi|552969722|gb|KF411135.1|440-994 gi|550602187|gb|KF305706.1|20-574 gi|550602065|gb|KF295829.1|119399-119953
ARG-ANNOT	Bla|MIR-8|FJ237367|1-1146|1146|betalactams|Class_C_betalactamases|MIR	(Bla)MIR-8:FJ237367:1-1146:1146
CARD	Bla|MIR-8|FJ237367|1-1146|1146|betalactams|Class_C_betalactamases|MIR	@phgb|FJ237367|0-1146|ARO:3002173|MIR-8 [Klebsiella pneumoniae]
Lahey	Bla|MIR-8|FJ237367|1-1146|1146|betalactams|Class_C_betalactamases|MIR	ACJ05687.1 FJ237367.1:1-1146
NCBI	Bla|MIR-8|FJ237367|1-1146|1146|betalactams|Class_C_betalactamases|MIR	gi|210061214|gb|FJ237367.1|1-1146
Resfinder	Bla|MIR-8|FJ237367|1-1146|1146|betalactams|Class_C_betalactamases|MIR	blaMIR-5_1_FJ237367
NCBI	Flq|CP000308.1|gene965|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|908262105|gb|CP006794.1|2898194-2900869 gi|908258101|gb|CP006754.1|202827-200152 gi|908253871|gb|CP006751.1|343287-340612 gi|908249689|gb|CP006748.1|4286196-4288871 gi|908245216|gb|CP006806.1|3174228-3171553 gi|908241204|gb|CP006758.1|1677739-1680414 gi|908236972|gb|CP006762.1|1041404-1038729 gi|908221924|gb|CP006792.1|1880720-1878045 gi|908217725|gb|CP006783.1|222741-225416 gi|805411710|gb|CP009836.1|2776596-2779271
NCBI	Bla|CTX-M-88_1_FJ873739|betalactams|Class_A_betalactamases|CTX	gi|227018497|gb|FJ873739.1|1-875
Resfinder	Bla|CTX-M-88_1_FJ873739|betalactams|Class_A_betalactamases|CTX	blaCTX-M-88_1_FJ873739
ARG-ANNOT	gi|169883503|gb|EU496816.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-33:EU496816:1-1140:1140
CARD	gi|169883503|gb|EU496816.1|betalactams|Class_C_betalactamases|CMY	@phgb|EU496816|0-1140|ARO:3002044|CMY-33 [Escherichia coli]
Lahey	gi|169883503|gb|EU496816.1|betalactams|Class_C_betalactamases|CMY	ACA97847.1 EU496816.1:1-1140
NCBI	gi|169883503|gb|EU496816.1|betalactams|Class_C_betalactamases|CMY	gi|169883503|gb|EU496816.1|1-1140
Resfinder	gi|169883503|gb|EU496816.1|betalactams|Class_C_betalactamases|CMY	blaCMY-33_1_EU496816
NCBI	Bla|TEM-1C_5_FJ560503|betalactams|Class_A_betalactamases|TEM	gi|951285167|emb|LN869922.1|874845-873985 gi|926539378|gb|CP012632.1|36531-35671 gi|909636816|emb|LN850165.1|94108-93248 gi|704486155|gb|KM083064.1|113268-112408 gi|566129968|gb|KF705206.1|12464-11604 gi|566129838|gb|KF705205.1|18294-17434 gi|695216944|ref|NG_037753.1|1556-696 gi|353233769|emb|HE603110.1|36101-36961 gi|695224810|ref|NG_041152.1|5229-6089 gi|254967221|gb|GQ343176.1|902-42
Resfinder	Bla|TEM-1C_5_FJ560503|betalactams|Class_A_betalactamases|TEM	blaTEM-1C_5_FJ560503
NCBI	Flq|CP002332.1|gene704|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|317013424|gb|CP002332.1|736559-739045
NCBI	gi|753186447|gb|KM983294.1|betalactams|Class_C_betalactamases|CMY	gi|753186447|gb|KM983294.1|1051-2279
ARG-ANNOT	Bla|OXA-142|EU358785|721-1521|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-142:EU358785:721-1521:801
CARD	Bla|OXA-142|EU358785|721-1521|801|betalactams|Class_D_betalactamases|OXA	@phgb|EU358785|720-1521|ARO:3001803|OXA-142 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-142|EU358785|721-1521|801|betalactams|Class_D_betalactamases|OXA	ABY79006.1 EU358785.1:721-1521
NCBI	Bla|OXA-142|EU358785|721-1521|801|betalactams|Class_D_betalactamases|OXA	gi|549442317|gb|KF257849.1|721-1521 gi|166034465|gb|EU358785.1|721-1521
Resfinder	Bla|OXA-142|EU358785|721-1521|801|betalactams|Class_D_betalactamases|OXA	blaOXA-142_1_EU358785
NCBI	Gly|AY082011.1|gene5|Glycopeptides|VanD-type_accessory_protein|VANYD	gi|27461214|gb|AY082011.1|3849-4917
ARG-ANNOT	MLS|Erm32|AJ009971|1790-2632|843|MLS|23S_rRNA_methyltransferases|ERM32	(MLS)Erm32:AJ009971:1790-2632:843
NCBI	MLS|Erm32|AJ009971|1790-2632|843|MLS|23S_rRNA_methyltransferases|ERM32	gi|5420302|emb|AJ009971.2|1790-2632 gi|4826568|emb|AJ005397.2|1772-1441
Resfinder	MLS|Erm32|AJ009971|1790-2632|843|MLS|23S_rRNA_methyltransferases|ERM32	erm(32)_1_AJ009971
CARD	CARD|phgb|AM296481|775-2041|ARO:3002699|cmlB1|Phenicol|Phenicol_efflux_pumps|CMLB	@phgb|AM296481|775-2041|ARO:3002699|cmlB1 [Bordetella bronchiseptica]
NCBI	CARD|phgb|AM296481|775-2041|ARO:3002699|cmlB1|Phenicol|Phenicol_efflux_pumps|CMLB	gi|695211929|ref|NG_036292.1|776-2042
ARG-ANNOT	Flq|QnrB12|AM774474|2435-3079|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)qnrB12:AM774474:2435-3079:645
CARD	Flq|QnrB12|AM774474|2435-3079|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|AM774474|2431-3079|ARO:3002726|QnrB12 [Citrobacter werkmanii]
NCBI	Flq|QnrB12|AM774474|2435-3079|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|154815966|emb|AM774474.1|2432-3079
Resfinder	Flq|QnrB12|AM774474|2435-3079|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB12_2_AM774474
ARG-ANNOT	Bla|cfiA8|AB087233|1-750|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA8:AB087233:1-750:750
NCBI	Bla|cfiA8|AB087233|1-750|750|betalactams|Class_B_betalactamases|CFIA	gi|22091071|dbj|AB087233.1|1-750
Resfinder	Bla|cfiA8|AB087233|1-750|750|betalactams|Class_B_betalactamases|CFIA	cfiA8_1_AB087233
CARD	CARD|phgb|NC_004771|3524-4157|ARO:3002675|catB2|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|NC_004771|3524-4157|ARO:3002675|catB2 [Pasteurella multocida]
NCBI	CARD|phgb|NC_004771|3524-4157|ARO:3002675|catB2|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|30314008|gb|AY232670.1|3525-4158
ARG-ANNOT	Flq|QnrB32|JN173054|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB32:JN173054:37-681:645
NCBI	Flq|QnrB32|JN173054|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|341873886|gb|JN173054.1|1-681
NCBI	MLS|vatE_3_AF153312|MLS|Streptogramin_A_O-acetyltransferase|VATE	gi|695199387|ref|NG_035215.1|271-915
Resfinder	MLS|vatE_3_AF153312|MLS|Streptogramin_A_O-acetyltransferase|VATE	vat(E)_3_AF153312
NCBI	Flq|NC_010611.6235697|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|974022331|gb|CP013924.1|885887-888601 gi|827403829|gb|CP010779.1|890123-892837 gi|803657307|gb|CP007535.2|1233897-1236611 gi|615556143|gb|CP007577.1|370218-367504 gi|586958174|gb|CP006963.1|3175129-3172415 gi|546200742|dbj|AP013357.1|908721-911435 gi|522344435|gb|CP003849.1|3000680-2997966 gi|522324570|gb|CP003846.1|3093306-3090592 gi|407899266|gb|CP003856.1|3298078-3295364 gi|385876581|gb|CP003500.1|884596-887310
ARG-ANNOT	Bla|OXA-244|JX438000|1-798|798|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-244:JX438000:1-798:798
CARD	Bla|OXA-244|JX438000|1-798|798|betalactams|Class_D_betalactamases|OXA	@phgb|JX438000|0-798|ARO:3001786|OXA-244 [Klebsiella pneumoniae]
Lahey	Bla|OXA-244|JX438000|1-798|798|betalactams|Class_D_betalactamases|OXA	AGC60012.1 JX438000.1:1-798
NCBI	Bla|OXA-244|JX438000|1-798|798|betalactams|Class_D_betalactamases|OXA	gi|825087941|gb|KP659189.1|20201-19404 gi|695227008|ref|NG_041605.1|1-798
Resfinder	Bla|OXA-244|JX438000|1-798|798|betalactams|Class_D_betalactamases|OXA	blaOXA-244_1_JX438000
ARG-ANNOT	Bla|DHA-3|AY494945|1310-2449|1140|betalactams|Class_C_betalactamases|DHA	(Bla)DHA-3:AY494945:1310-2449:1140
CARD	Bla|DHA-3|AY494945|1310-2449|1140|betalactams|Class_C_betalactamases|DHA	@phgb|AY494945|1309-2449|ARO:3002134|DHA-3 [Klebsiella pneumoniae]
Lahey	Bla|DHA-3|AY494945|1310-2449|1140|betalactams|Class_C_betalactamases|DHA	AAR87489.1 AY494945.1:1310-2449
NCBI	Bla|DHA-3|AY494945|1310-2449|1140|betalactams|Class_C_betalactamases|DHA	gi|695210343|ref|NG_035931.1|1310-2449
Resfinder	Bla|DHA-3|AY494945|1310-2449|1140|betalactams|Class_C_betalactamases|DHA	blaDHA-3_1_AY494945
NCBI	Bla|CMY-3_1_Y16783|betalactams|Class_C_betalactamases|CMY	gi|2959383|emb|Y16782.1|1-1143
Resfinder	Bla|CMY-3_1_Y16783|betalactams|Class_C_betalactamases|CMY	blaCMY-3_1_Y16783
NCBI	200|unknown_id|unknown_name|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|187763215|gb|EU523697.1|615-1
CARD	Flq|QnrVC4_1_GQ891757|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	@phgb|GQ891757|2004-2661|ARO:3002801|QnrVC4 [Aeromonas caviae]
NCBI	Flq|QnrVC4_1_GQ891757|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	gi|469518777|gb|JX173958.1|1694-2350 gi|469518766|gb|JX173954.1|1366-2022 gi|388837302|gb|JQ838003.1|1-657 gi|388837294|gb|JQ838001.1|824-1480 gi|388837287|gb|JQ837999.1|800-1456 gi|298104543|gb|GQ891757.1|2005-2661 gi|759764376|emb|LN736033.1|1-361
Resfinder	Flq|QnrVC4_1_GQ891757|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	QnrVC4_1_GQ891757
NCBI	Sul|NC_003923.1002573|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|47118312|dbj|BA000033.2|530596-531399
ARG-ANNOT	Bla|CTX-M-32|AJ557142|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-32:AJ557142:1-876:876
CARD	Bla|CTX-M-32|AJ557142|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AJ557142|0-876|ARO:3001894|CTX-M-32 [Escherichia coli]
Lahey	Bla|CTX-M-32|AJ557142|1-876|876|betalactams|Class_A_betalactamases|CTX	CAD89606.1 AJ557142.1:1-876
NCBI	Bla|CTX-M-32|AJ557142|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|909636816|emb|LN850165.1|116087-116962 gi|909636430|emb|LN850162.1|20715-21590 gi|119926019|emb|AM420303.1|2739-3614 gi|695209465|ref|NG_035837.1|1-876
Resfinder	Bla|CTX-M-32|AJ557142|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-32_2_AM420303
CARD	gi|343480067|gb|JF274244.1|betalactams|Class_A_betalactamases|CTX	@phgb|JF274244|0-863|ARO:3001967|CTX-M-107 [Shigella sp. SH219]
NCBI	gi|343480067|gb|JF274244.1|betalactams|Class_A_betalactamases|CTX	gi|343480067|gb|JF274244.1|1-864
ARG-ANNOT	Bla|TEM-164|EU274580|215-1075|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-164:EU274580:215-1075:861
CARD	Bla|TEM-164|EU274580|215-1075|861|betalactams|Class_A_betalactamases|TEM	@phgb|EU274580|214-1075|ARO:3001030|TEM-164 [Klebsiella pneumoniae]
Lahey	Bla|TEM-164|EU274580|215-1075|861|betalactams|Class_A_betalactamases|TEM	ABX71157.1 EU274580.1:215-1075
NCBI	Bla|TEM-164|EU274580|215-1075|861|betalactams|Class_A_betalactamases|TEM	gi|695213005|ref|NG_036534.1|215-1075
Resfinder	Bla|TEM-164|EU274580|215-1075|861|betalactams|Class_A_betalactamases|TEM	blaTEM-164_1_EU274580
NCBI	gi|3282023|emb|Y17581.1|betalactams|Class_A_betalactamases|TEM	gi|3282023|emb|Y17581.1|1-936
ARG-ANNOT	gi|378405410|gb|JQ348841.1|betalactams|Class_B_betalactamases|NDM	(Bla)NDM-4:JQ348841:1-813:813
CARD	gi|378405410|gb|JQ348841.1|betalactams|Class_B_betalactamases|NDM	@phgb|JQ348841|0-813|ARO:3002355|NDM-4 [Escherichia coli]
Lahey	gi|378405410|gb|JQ348841.1|betalactams|Class_B_betalactamases|NDM	AFB82585.1 JQ348841.1:1-813
NCBI	gi|378405410|gb|JQ348841.1|betalactams|Class_B_betalactamases|NDM	gi|908399142|gb|KP772213.1|813-1 gi|908399140|gb|KP772212.1|813-1 gi|848612468|gb|KP826711.1|517-1329 gi|848612352|gb|KP826709.1|187-999 gi|848612209|gb|KP826707.1|515-1327 gi|806638916|gb|KM400601.1|9162-8350 gi|731516157|gb|KM111592.1|21-833 gi|378405410|gb|JQ348841.1|1-813
Resfinder	gi|378405410|gb|JQ348841.1|betalactams|Class_B_betalactamases|NDM	blaNDM-4_1_JQ348841
CARD	CARD|pvgb|NC_014121|1270697-1271351|ARO:3003374|Enterobacter|Multi-drug_resistance|MDR_regulator|ACRR|RequiresSNPConfirmation	@pvgb|NC_014121|1270697-1271351|ARO:3003374|Enterobacter aerogenes acrR mutation resulting in antibiotic resistance [Enterobacter cloacae subsp. cloacae ATCC 13047]
NCBI	CARD|pvgb|NC_014121|1270697-1271351|ARO:3003374|Enterobacter|Multi-drug_resistance|MDR_regulator|ACRR|RequiresSNPConfirmation	gi|295054830|gb|CP001918.1|1270698-1271351
ARG-ANNOT	Tet|TetE|DQ366299|36-1253|1218|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	(Tet)TetE:DQ366299:36-1253:1218
NCBI	Tet|TetE|DQ366299|36-1253|1218|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	gi|142855988|gb|CP000645.1|4109-5326 gi|113129378|gb|DQ366299.1|36-1253 gi|296044844|gb|HM041203.1|192-1 gi|82408526|gb|DQ267819.1|1-192 gi|83656975|gb|DQ316140.1|1-190
Resfinder	Tet|TetE|DQ366299|36-1253|1218|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	tet(E)_5_CP000645
ARG-ANNOT	gi|81365634|gb|DQ105528.2|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-145:DQ105528:1-861:861
CARD	gi|81365634|gb|DQ105528.2|betalactams|Class_A_betalactamases|TEM	@phgb|DQ105528|0-861|ARO:3001012|TEM-145 [Escherichia coli]
Lahey	gi|81365634|gb|DQ105528.2|betalactams|Class_A_betalactamases|TEM	AAZ14083.2 DQ105528.2:1-861
NCBI	gi|81365634|gb|DQ105528.2|betalactams|Class_A_betalactamases|TEM	gi|81365634|gb|DQ105528.2|1-861
Resfinder	gi|81365634|gb|DQ105528.2|betalactams|Class_A_betalactamases|TEM	blaTEM-145_1_DQ105528
CARD	gi|555947825|gb|KF564648.1|betalactams|Class_C_betalactamases|CMY	@phgb|KF564648|0-1146|ARO:3002120|CMY-108 [Escherichia coli]
Lahey	gi|555947825|gb|KF564648.1|betalactams|Class_C_betalactamases|CMY	AGZ20169.1 KF564648.1:1-1146
NCBI	gi|555947825|gb|KF564648.1|betalactams|Class_C_betalactamases|CMY	gi|555947825|gb|KF564648.1|1-1146
NCBI	gi|407731534|gb|JX440355.1|betalactams|Class_C_betalactamases|ACT	gi|407731534|gb|JX440355.1|650-1897
NCBI	Bla|NC_002745.1122813|betalactams|Penicillin_binding_protein|MECA	gi|985566378|dbj|LC068959.1|25887-27644 gi|985563902|dbj|AB721404.1|39037-40794 gi|974161314|gb|CP012018.1|71036-72793 gi|974158397|gb|CP012015.1|71040-72797 gi|974155539|gb|CP012013.1|71037-72794 gi|974152716|gb|CP012012.1|71252-73009 gi|974149849|gb|CP012011.1|72396-74153 gi|955659783|emb|LN864705.1|6025-7782 gi|937132516|gb|KT316803.1|6469-8226 gi|758371776|dbj|AB983237.1|38178-39935
ARG-ANNOT	gi|404432492|emb|HE963769.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-248:HE963769:1-825:825
CARD	gi|404432492|emb|HE963769.1|betalactams|Class_D_betalactamases|OXA	@phgb|HE963769|0-825|ARO:3001673|OXA-248 [Acinetobacter baumannii]
Lahey	gi|404432492|emb|HE963769.1|betalactams|Class_D_betalactamases|OXA	CCJ32596.1 HE963769.1:1-825
NCBI	gi|404432492|emb|HE963769.1|betalactams|Class_D_betalactamases|OXA	gi|404432492|emb|HE963769.1|1-825
Resfinder	gi|404432492|emb|HE963769.1|betalactams|Class_D_betalactamases|OXA	blaOXA-248_1_HE963769
CARD	gi|558045656|gb|KF481967.1|betalactams|Class_A_betalactamases|SME	@phgb|KF481967|0-885|ARO:3002382|SME-4 [Serratia marcescens]
Lahey	gi|558045656|gb|KF481967.1|betalactams|Class_A_betalactamases|SME	AHA49908.1 KF481967.1:1-885
NCBI	gi|558045656|gb|KF481967.1|betalactams|Class_A_betalactamases|SME	gi|554888904|gb|KF615855.1|20696-19812 gi|339461612|gb|JF974075.1|1-885 gi|510203|emb|Z30237.1|95-1
ARG-ANNOT	gi|2765068|emb|Y10280.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-48:Y10280:1-861:861
CARD	gi|2765068|emb|Y10280.1|betalactams|Class_A_betalactamases|TEM	@phgb|Y10280|0-861|ARO:3000917|TEM-48 [Klebsiella pneumoniae]
Lahey	gi|2765068|emb|Y10280.1|betalactams|Class_A_betalactamases|TEM	CAA71323.1 Y10280.1:1-861
NCBI	gi|2765068|emb|Y10280.1|betalactams|Class_A_betalactamases|TEM	gi|2765068|emb|Y10280.1|1-861
Resfinder	gi|2765068|emb|Y10280.1|betalactams|Class_A_betalactamases|TEM	blaTEM-48_1_Y10280
ARG-ANNOT	Bla|CTX-M-58|HQ734707|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-58:HQ734707:1-876:876
NCBI	Bla|CTX-M-58|HQ734707|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|342308414|gb|HQ734707.1|1-876
ARG-ANNOT	AGly|Aph2-dprime-Ie|AY939911|3536-4441|906|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	(AGly)Aph2''Ie:AY939911:3536-4441:906
CARD	AGly|Aph2-dprime-Ie|AY939911|3536-4441|906|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	@phgb|AY939911|3535-4441|ARO:3002634|APH(2'')-Ie [Enterococcus casseliflavus]
NCBI	AGly|Aph2-dprime-Ie|AY939911|3536-4441|906|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	gi|57918601|gb|AY743255.1|131-1036 gi|695211393|ref|NG_036067.1|3536-4441 gi|695211393|ref|NG_036067.1|2560-2875 gi|50512855|gb|AY677166.1|1-642
Resfinder	AGly|Aph2-dprime-Ie|AY939911|3536-4441|906|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	aph(2'')-Ie_1_AY743255
CARD	gi|544598945|gb|KF240809.1|betalactams|Class_A_betalactamases|CTX	@phgb|KF240809|0-876|ARO:3002000|CTX-M-142 [Escherichia coli]
Lahey	gi|544598945|gb|KF240809.1|betalactams|Class_A_betalactamases|CTX	AGW25368.1 KF240809.1:1-876
NCBI	gi|544598945|gb|KF240809.1|betalactams|Class_A_betalactamases|CTX	gi|544598945|gb|KF240809.1|1-876
Resfinder	gi|544598945|gb|KF240809.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-142_1_KF240809
ARG-ANNOT	Bla|OXA-147|FJ848783|1271-2071|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-147:FJ848783:1271-2071:801
CARD	Bla|OXA-147|FJ848783|1271-2071|801|betalactams|Class_D_betalactamases|OXA	@phgb|FJ848783|1270-2071|ARO:3001801|OXA-147 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-147|FJ848783|1271-2071|801|betalactams|Class_D_betalactamases|OXA	ACO72579.1 FJ848783.1:1271-2071
NCBI	Bla|OXA-147|FJ848783|1271-2071|801|betalactams|Class_D_betalactamases|OXA	gi|226536681|gb|FJ848783.1|1271-2071
Resfinder	Bla|OXA-147|FJ848783|1271-2071|801|betalactams|Class_D_betalactamases|OXA	blaOXA-147_1_FJ848783
ARG-ANNOT	AGly|Aac3-VIa|M88012|193-1092|900|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-VIa:M88012:193-1092:900
CARD	AGly|Aac3-VIa|M88012|193-1092|900|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|M88012|192-1092|ARO:3002540|AAC(3)-VIa [Enterobacter cloacae]
NCBI	AGly|Aac3-VIa|M88012|193-1092|900|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|148339|gb|M88012.1|ENTAAC3VI|193-1092
Resfinder	AGly|Aac3-VIa|M88012|193-1092|900|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	aac(3)-VIa_1_M88012
ARG-ANNOT	Bla|AMPH_Ecoli|AP012030|395554-396711|1158|betalactams|Penicillin_binding_protein|AMPH	(Bla)AMPH_Ecoli:AP012030:395554-396711:1158
NCBI	Bla|AMPH_Ecoli|AP012030|395554-396711|1158|betalactams|Penicillin_binding_protein|AMPH	gi|985000614|gb|CP014225.1|3235028-3233871 gi|958627747|gb|CP013253.1|3056922-3058079 gi|939732440|gb|CP011343.2|394640-393483 gi|939731527|gb|CP011342.2|395076-393919 gi|937526251|gb|CP012870.1|4245388-4246545 gi|937521852|gb|CP012869.1|4245389-4246546 gi|937517453|gb|CP012868.1|4245378-4246535 gi|932857508|emb|LN877770.1|775721-774564 gi|923416119|gb|CP011113.1|383073-381916 gi|899729770|gb|CP012127.1|396710-395553
ARG-ANNOT	MLS|VatD|L12033|162-791|630|MLS|Streptogramin_A_O-acetyltransferase|VATD	(MLS)VatD:L12033:162-791:630
NCBI	MLS|VatD|L12033|162-791|630|MLS|Streptogramin_A_O-acetyltransferase|VATD	gi|15127841|gb|AF368302.1|AF368302|2702-3331 gi|433714|gb|L12033.1|ENESATA|162-791
Resfinder	MLS|VatD|L12033|162-791|630|MLS|Streptogramin_A_O-acetyltransferase|VATD	vat(D)_1_L12033
ARG-ANNOT	Flq|QnrS3|EU077611|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	(Flq)QnrS3:EU077611:1-657:657
NCBI	Flq|QnrS3|EU077611|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|156144845|gb|EU077611.1|1-656
Resfinder	Flq|QnrS3|EU077611|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	QnrS3_1_EU077611
ARG-ANNOT	gi|295809671|emb|AM991978.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-139:AM991978:1-828:828
CARD	gi|295809671|emb|AM991978.1|betalactams|Class_D_betalactamases|OXA	@phgb|AM991978|0-828|ARO:3001451|OXA-139 [Acinetobacter baumannii]
Lahey	gi|295809671|emb|AM991978.1|betalactams|Class_D_betalactamases|OXA	CAQ51348.1 AM991978.1:1-828
NCBI	gi|295809671|emb|AM991978.1|betalactams|Class_D_betalactamases|OXA	gi|295809671|emb|AM991978.1|1-828 gi|908777896|gb|KT022421.1|33-1
Resfinder	gi|295809671|emb|AM991978.1|betalactams|Class_D_betalactamases|OXA	blaOXA-139_1_AM991978
CARD	CARD|phgb|AY114142|1060-1816|ARO:3002625|ANT4-PRIME-IIb|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	@phgb|AY114142|1060-1816|ARO:3002625|ANT(4')-IIb [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AY114142|1060-1816|ARO:3002625|ANT4-PRIME-IIb|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	gi|30171088|gb|AY114142.1|1061-1817
CARD	155|U57969.1|PAU57969|Multi-drug_resistance|MDR_mutant_porin_proteins|OPRJ	@phgb|U57969|4622-6062|ARO:3000802|oprJ [Pseudomonas aeruginosa]
NCBI	155|U57969.1|PAU57969|Multi-drug_resistance|MDR_mutant_porin_proteins|OPRJ	gi|1399756|gb|U57969.1|PAU57969|4623-6062
NCBI	1832|EF118171.1|EF118171|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|974319461|gb|CP008865.1|2545894-2545376 gi|971339514|gb|CP006662.2|83260-82742 gi|943457735|gb|KT818627.1|74820-74302 gi|943457735|gb|KT818627.1|136411-135893 gi|902625474|gb|CP011993.1|2651-2133 gi|902625122|gb|CP011990.1|137150-137668 gi|902618983|gb|CP011988.1|3506-2988 gi|902618894|gb|CP011987.1|7246-6728 gi|800908878|gb|KP345882.1|47652-48170 gi|760459974|gb|KJ958927.1|14264-13746 gi|760459883|gb|KJ958926.1|9176-8658
CARD	Flq|QnrVC5_1_JN408080|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	@phgb|JN408080|0-657|ARO:3002802|QnrVC5 [Vibrio fluvialis]
NCBI	Flq|QnrVC5_1_JN408080|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	gi|507137590|gb|KC540630.1|1832-1176 gi|695226241|ref|NG_041459.1|1-657
Resfinder	Flq|QnrVC5_1_JN408080|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	QnrVC5_1_JN408080
ARG-ANNOT	gi|388327216|gb|JQ838185.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-207:JQ838185:1-828:828
CARD	gi|388327216|gb|JQ838185.1|betalactams|Class_D_betalactamases|OXA	@phgb|JQ838185|0-828|ARO:3001485|OXA-207 [Acinetobacter pittii]
Lahey	gi|388327216|gb|JQ838185.1|betalactams|Class_D_betalactamases|OXA	AFK28473.1 JQ838185.1:1-828
NCBI	gi|388327216|gb|JQ838185.1|betalactams|Class_D_betalactamases|OXA	gi|388327216|gb|JQ838185.1|1-828 gi|908777896|gb|KT022421.1|33-1
Resfinder	gi|388327216|gb|JQ838185.1|betalactams|Class_D_betalactamases|OXA	blaOXA-207_1_JQ838185
NCBI	Tet|tet38_3_FR821779|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET38	gi|344176319|emb|FR821779.1|130976-132328
ARG-ANNOT	Bla|KPC-3|JN255861|139-1020|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-3:JN255861:139-1020:882
CARD	Bla|KPC-3|JN255861|139-1020|882|betalactams|Class_A_betalactamases|KPC	@phgb|AF395881|0-882|ARO:3002313|KPC-3 [Klebsiella pneumoniae]
Lahey	Bla|KPC-3|JN255861|139-1020|882|betalactams|Class_A_betalactamases|KPC	AAL05630.1 AF395881.1:1-882
NCBI	Bla|KPC-3|JN255861|139-1020|882|betalactams|Class_A_betalactamases|KPC	gi|908777676|gb|KT148595.1|14544-13663 gi|940785863|gb|KT362706.1|18921-19802 gi|940785863|gb|KT362706.1|33197-32316 gi|933686953|gb|KT378598.1|7208-8089 gi|933686943|gb|KT378597.1|7208-8089 gi|933686933|gb|KT378596.1|7110-7991 gi|910286593|gb|CP012163.1|7361-6480 gi|910286593|gb|CP012163.1|60160-59279 gi|902611595|gb|CP011978.1|61933-61052 gi|828971628|gb|CP011646.1|38232-37351 gi|828971542|gb|CP011645.1|61971-61090 gi|828921939|gb|CP011589.1|20801-21682
Resfinder	Bla|KPC-3|JN255861|139-1020|882|betalactams|Class_A_betalactamases|KPC	blaKPC-3_1_HM769262
ARG-ANNOT	gi|323473327|gb|HQ858608.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-27:HQ858608:1-801:801
CARD	gi|323473327|gb|HQ858608.1|betalactams|Class_B_betalactamases|VIM	@phgb|HQ858608|0-801|ARO:3002297|VIM-27 [Klebsiella pneumoniae]
Lahey	gi|323473327|gb|HQ858608.1|betalactams|Class_B_betalactamases|VIM	ADX78234.1 HQ858608.1:1-801
NCBI	gi|323473327|gb|HQ858608.1|betalactams|Class_B_betalactamases|VIM	gi|695225694|ref|NG_041394.1|124-924 gi|323473327|gb|HQ858608.1|1-801
Resfinder	gi|323473327|gb|HQ858608.1|betalactams|Class_B_betalactamases|VIM	blaVIM-27_1_HQ858608
ARG-ANNOT	Bla|OXA-64|AY750907|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-64:AY750907:1-825:825
CARD	Bla|OXA-64|AY750907|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|AY750907|0-825|ARO:3001613|OXA-64 [Acinetobacter baumannii]
Lahey	Bla|OXA-64|AY750907|1-825|825|betalactams|Class_D_betalactamases|OXA	AAW81336.1 AY750907.1:1-825
NCBI	Bla|OXA-64|AY750907|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|974570295|emb|LN997846.1|1659320-1658496 gi|846382486|emb|LN865143.1|1659355-1658531 gi|797179418|gb|KP890935.1|1011-1835 gi|58701167|gb|AY750907.1|1-825
Resfinder	Bla|OXA-64|AY750907|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-64_1_AY750907
CARD	CARD|phgb|AY769962|5610-7065|ARO:3000782|adeK|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEK	@phgb|AY769962|5610-7065|ARO:3000782|adeK [Acinetobacter baumannii]
NCBI	CARD|phgb|AY769962|5610-7065|ARO:3000782|adeK|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEK	gi|984881271|gb|CP014215.1|3006062-3007517 gi|974022331|gb|CP013924.1|734553-733098 gi|827403829|gb|CP010779.1|739115-737660 gi|803657307|gb|CP007535.2|1090309-1091764 gi|615556143|gb|CP007577.1|2853809-2855264 gi|586958174|gb|CP006963.1|3320693-3322148 gi|546200742|dbj|AP013357.1|757844-756389 gi|522344435|gb|CP003849.1|3146728-3148183 gi|522324570|gb|CP003846.1|3236010-3237465 gi|407899266|gb|CP003856.1|3444750-3446205
CARD	gi|544598943|gb|KF240808.1|betalactams|Class_A_betalactamases|TEM	@phgb|KF240808|0-861|ARO:3001386|TEM-209 [Klebsiella pneumoniae]
NCBI	gi|544598943|gb|KF240808.1|betalactams|Class_A_betalactamases|TEM	gi|544598943|gb|KF240808.1|1-862
NCBI	Bla|CMY-16_2_FJ855437|betalactams|Class_C_betalactamases|CMY	gi|846280687|gb|KR091911.1|139124-137979 gi|514883893|gb|JX442976.1|90905-92050 gi|269799027|gb|FJ855437.1|1772-2917
Resfinder	Bla|CMY-16_2_FJ855437|betalactams|Class_C_betalactamases|CMY	blaCMY-16_2_FJ855437
ARG-ANNOT	Bla|OXA-309|HF947514|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-309:HF947514:1-825:825
CARD	Bla|OXA-309|HF947514|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HF947514|0-825|ARO:3001504|OXA-309 [Acinetobacter johnsonii]
Lahey	Bla|OXA-309|HF947514|1-825|825|betalactams|Class_D_betalactamases|OXA	CCW28916.1 HF947514.1:1-825
NCBI	Bla|OXA-309|HF947514|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|507581354|emb|HF947514.1|1-825
Resfinder	Bla|OXA-309|HF947514|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-309_1_HF947514
CARD	Bla|KJ135343.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KJ135343|14-839|ARO:3001574|OXA-388 [Acinetobacter baumannii]
Lahey	Bla|KJ135343.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30284.1 KJ135343.1:15-839
NCBI	Bla|KJ135343.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389165|gb|KJ135343.1|15-839
CARD	gi|698174179|gb|KM087844.1|betalactams|Class_C_betalactamases|CMY	@phgb|KM087844|0-1146|ARO:3002128|CMY-117 [Citrobacter freundii]
Lahey	gi|698174179|gb|KM087844.1|betalactams|Class_C_betalactamases|CMY	AIT76097.1 KM087844.1:1-1146
NCBI	gi|698174179|gb|KM087844.1|betalactams|Class_C_betalactamases|CMY	gi|698174179|gb|KM087844.1|1-1146
Lahey	gi|817548330|gb|KP735848.1|betalactams|Class_B_betalactamases|NDM	AKF43458.1 KP735848.1:1-813
NCBI	gi|817548330|gb|KP735848.1|betalactams|Class_B_betalactamases|NDM	gi|817548330|gb|KP735848.1|1-813
NCBI	AGly|rmtE_1_GU201947|Aminoglycosides|16S_rRNA_methyltransferases|RMTE	gi|723759024|gb|KP056256.1|120993-120172 gi|281359433|gb|GU201947.1|55-876
Resfinder	AGly|rmtE_1_GU201947|Aminoglycosides|16S_rRNA_methyltransferases|RMTE	rmtE_1_GU201947
CARD	CARD|phgb|X64523|476-1337|ARO:3000875|TEM-3|betalactams|Class_A_betalactamases|TEM	@phgb|X64523|476-1337|ARO:3000875|TEM-3 [Klebsiella pneumoniae]
NCBI	CARD|phgb|X64523|476-1337|ARO:3000875|TEM-3|betalactams|Class_A_betalactamases|TEM	gi|695196410|ref|NG_034408.1|477-1338
ARG-ANNOT	Bla|VIM-18|AM778091|27-815|789|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-18:AM778091:27-815:789
CARD	Bla|VIM-18|AM778091|27-815|789|betalactams|Class_B_betalactamases|VIM	@phgb|AM778091|26-815|ARO:3002288|VIM-18 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-18|AM778091|27-815|789|betalactams|Class_B_betalactamases|VIM	CAO83029.1 AM778091.1:27-815
NCBI	Bla|VIM-18|AM778091|27-815|789|betalactams|Class_B_betalactamases|VIM	gi|157310266|emb|AM778091.1|27-815
Resfinder	Bla|VIM-18|AM778091|27-815|789|betalactams|Class_B_betalactamases|VIM	blaVIM-18_1_AM778091
CARD	CARD|phgb|AB219524.1|4334-5810|ARO:3003700|opmE|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXN	@phgb|AB219524.1|4334-5810|ARO:3003700|opmE [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AB219524.1|4334-5810|ARO:3003700|opmE|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXN	gi|926451317|emb|LN871187.1|1576342-1577817 gi|553895034|gb|CP006832.1|3939490-3938015 gi|553886202|gb|CP006831.1|3939490-3938015 gi|543879514|gb|CP006705.1|3719078-3717603 gi|110227054|gb|AE004091.2|3939495-3938020 gi|68533165|dbj|AB219524.1|4335-5810 gi|25137488|dbj|AB085583.1|1-1476
CARD	CARD|phgb|X82668|187-922|ARO:3000250|ErmC|MLS|23S_rRNA_methyltransferases|ERMC	@phgb|X82668|187-922|ARO:3000250|ErmC [Staphylococcus equorum subsp. equorum]
NCBI	CARD|phgb|X82668|187-922|ARO:3000250|ErmC|MLS|23S_rRNA_methyltransferases|ERMC	gi|909776345|gb|KP065813.1|2837-3572 gi|749502733|gb|KP255997.1|3570-4305 gi|749502730|gb|KP255996.1|4471-3736 gi|671774829|gb|KM017875.1|572-1307 gi|658131576|emb|HG380318.1|78-813 gi|378968505|gb|AY661563.2|4804-5539 gi|378968504|gb|AF424805.2|4212-3477 gi|375314803|gb|JN798465.1|6978-7713 gi|375331809|dbj|AB517728.1|2828-3563 gi|353127761|gb|JF968527.1|564-1299
NCBI	gi|46403068|gb|AY584237.1|betalactams|Class_A_betalactamases|SME	gi|46403068|gb|AY584237.1|1-1138 gi|510203|emb|Z30237.1|218-1
CARD	Mdr|NC_002516.2.880347|Multi-drug_resistance|Multi-drug_efflux_pumps|OMF	@phgb|NC_002516|4710620-4712084|ARO:3000809|opmD [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.880347|Multi-drug_resistance|Multi-drug_efflux_pumps|OMF	gi|974359204|gb|CP008871.1|5159899-5161362 gi|946706141|emb|LN870292.1|802423-800960 gi|926451317|emb|LN871187.1|805215-803752 gi|553895034|gb|CP006832.1|4710616-4712079 gi|553886202|gb|CP006831.1|4711701-4713164 gi|543879514|gb|CP006705.1|4490204-4491667 gi|392316915|gb|CP003149.1|782294-780831 gi|347302377|gb|CP002496.1|798559-797096 gi|110227054|gb|AE004091.2|4710621-4712084 gi|25137486|dbj|AB085582.1|1-1464
ARG-ANNOT	1202|AF318077.1|AF318077|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-7:AY625685:1-741:741
CARD	1202|AF318077.1|AF318077|betalactams|Class_B_betalactamases|IMP	@phgb|AF318077|1147-1888|ARO:3002198|IMP-7 [Pseudomonas aeruginosa]
Lahey	1202|AF318077.1|AF318077|betalactams|Class_B_betalactamases|IMP	AAK12087.1 AF318077.1:1148-1888
NCBI	1202|AF318077.1|AF318077|betalactams|Class_B_betalactamases|IMP	gi|940516916|dbj|LC091210.1|4251-4991 gi|940516911|dbj|LC091209.1|2915-3655 gi|575771414|dbj|AB901047.1|97-837 gi|441482385|gb|JX982232.1|1194-1934 gi|295984001|gb|HM021184.1|1136-1876 gi|21042096|gb|AF416736.2|1-741 gi|13094933|gb|AF318077.1|1148-1888 gi|48994744|gb|AY625685.1|1-741 gi|282312440|gb|GU213192.1|1-568
Resfinder	1202|AF318077.1|AF318077|betalactams|Class_B_betalactamases|IMP	blaIMP-7_1_AF318077
ARG-ANNOT	Bla|CMY-75|JQ733572|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-75:JQ733572:1028-2173:1146
CARD	Bla|CMY-75|JQ733572|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ733572|1027-2173|ARO:3002088|CMY-75 [Citrobacter freundii]
Lahey	Bla|CMY-75|JQ733572|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	AFK73434.1 JQ733572.1:1028-2173
NCBI	Bla|CMY-75|JQ733572|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	gi|388564831|gb|JQ733572.1|1028-2173
Resfinder	Bla|CMY-75|JQ733572|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-75_1_JQ733572
CARD	139|AB894099.1|AB894099|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	@phgb|AB894099|4218-5697|ARO:3000785|cmeC [Campylobacter jejuni subsp. jejuni]
NCBI	139|AB894099.1|AB894099|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	gi|777189043|emb|LN831025.1|335575-334097 gi|633259730|dbj|AB894099.1|4219-5697 gi|612154262|gb|CP005081.1|400376-398898
ARG-ANNOT	gi|7649400|emb|AJ277535.1|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-4:AJ277535:1-1149:1149
CARD	gi|7649400|emb|AJ277535.1|betalactams|Class_C_betalactamases|FOX	@phgb|AJ277535|0-1149|ARO:3002158|FOX-4 [Escherichia coli]
Lahey	gi|7649400|emb|AJ277535.1|betalactams|Class_C_betalactamases|FOX	CAB89086.1 AJ277535.1:1-1149
NCBI	gi|7649400|emb|AJ277535.1|betalactams|Class_C_betalactamases|FOX	gi|695199577|ref|NG_035264.1|1-1149
Resfinder	gi|7649400|emb|AJ277535.1|betalactams|Class_C_betalactamases|FOX	blaFOX-4_1_AJ277535
CARD	Tet|AJ295238|gene|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET32	@phgb|AJ295238|0-1920|ARO:3000196|tet32 [Clostridiaceae bacterium K10]
NCBI	Tet|AJ295238|gene|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET32	gi|295089810|emb|FP929037.1|532915-530996 gi|162417574|emb|AJ295238.3|164-2083
CARD	CARD|phgb|KP109681|1642-2515|ARO:3003717|ESP-1|betalactams|Class_B_betalactamases|ESP	@phgb|KP109681|1642-2515|ARO:3003717|ESP-1 [Epilithonimonas sp. Stok-2]
NCBI	CARD|phgb|KP109681|1642-2515|ARO:3003717|ESP-1|betalactams|Class_B_betalactamases|ESP	gi|762020460|gb|KP109681.1|1643-2515
NCBI	Sul|sul1_31_AM040449|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|68262569|emb|AM040449.1|3369-4208
Resfinder	Sul|sul1_31_AM040449|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_31_AM040449
CARD	Tmt|dfrK_8_FN812951|Trimethoprim|Dihydrofolate_reductase|DFRK	@phgb|FN812951|0-492|ARO:3002869|dfrK [Staphylococcus aureus]
NCBI	Tmt|dfrK_8_FN812951|Trimethoprim|Dihydrofolate_reductase|DFRK	gi|295419297|emb|FN812951.1|1-492
Resfinder	Tmt|dfrK_8_FN812951|Trimethoprim|Dihydrofolate_reductase|DFRK	dfrK_8_FN812951
ARG-ANNOT	AGly|AadA17|FJ460181|774-1565|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA17:FJ460181:774-1565:792
CARD	AGly|AadA17|FJ460181|774-1565|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|FJ460181|1790-2582|ARO:3002617|aadA17 [Aeromonas media]
NCBI	AGly|AadA17|FJ460181|774-1565|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|351214273|gb|FJ460181.2|1791-2582
Resfinder	AGly|AadA17|FJ460181|774-1565|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA17_1_FJ460181
CARD	Bla|FJ666071.1|gene1|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666071|0-1194|ARO:3002507|PDC-8 [Pseudomonas aeruginosa]
Lahey	Bla|FJ666071.1|gene1|betalactams|Class_C_betalactamases|PDC	ACQ82813.1 FJ666071.1:1-1194
NCBI	Bla|FJ666071.1|gene1|betalactams|Class_C_betalactamases|PDC	gi|229597531|gb|FJ666071.1|1-1194
ARG-ANNOT	gi|83031782|gb|DQ286729.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-55:DQ286729:1-861:861
CARD	gi|83031782|gb|DQ286729.1|betalactams|Class_A_betalactamases|TEM	@phgb|DQ286729|0-861|ARO:3000924|TEM-55 [Escherichia coli]
Lahey	gi|83031782|gb|DQ286729.1|betalactams|Class_A_betalactamases|TEM	ABB97007.1 DQ286729.1:1-861
NCBI	gi|83031782|gb|DQ286729.1|betalactams|Class_A_betalactamases|TEM	gi|83031782|gb|DQ286729.1|1-861
Resfinder	gi|83031782|gb|DQ286729.1|betalactams|Class_A_betalactamases|TEM	blaTEM-55_1_DQ286729
ARG-ANNOT	Bla|OXY2-4|AY17714|147-1016|870|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-4:AY17714:147-1016:870
CARD	Bla|OXY2-4|AY17714|147-1016|870|betalactams|Class_A_betalactamases|OXY	@phgb|Y17714|146-1016|ARO:3002399|OXY-2-4 [Klebsiella oxytoca]
NCBI	Bla|OXY2-4|AY17714|147-1016|870|betalactams|Class_A_betalactamases|OXY	gi|4775462|emb|Y17714.1|147-1016
Resfinder	Bla|OXY2-4|AY17714|147-1016|870|betalactams|Class_A_betalactamases|OXY	blaOXY-2-4_4_Y17714
ARG-ANNOT	gi|22725670|gb|AF535129.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-41:AF535129:1-861:861
CARD	gi|22725670|gb|AF535129.1|betalactams|Class_A_betalactamases|SHV	@phgb|AF535129|0-861|ARO:3001099|SHV-41 [Klebsiella pneumoniae]
Lahey	gi|22725670|gb|AF535129.1|betalactams|Class_A_betalactamases|SHV	AAN04883.1 AF535129.1:1-861
NCBI	gi|22725670|gb|AF535129.1|betalactams|Class_A_betalactamases|SHV	gi|22725670|gb|AF535129.1|1-861
Resfinder	gi|22725670|gb|AF535129.1|betalactams|Class_A_betalactamases|SHV	blaSHV-41_1_AF535129
NCBI	Flq|NC_009725.1.5460264|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|556017688|gb|CP006845.1|1840935-1843358 gi|154350369|gb|CP000560.1|1845574-1847997
ARG-ANNOT	gi|37931483|gb|AY237830.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-47:AY237830:1-831:831
CARD	gi|37931483|gb|AY237830.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY237830|0-831|ARO:3001781|OXA-47 [Klebsiella pneumoniae]
Lahey	gi|37931483|gb|AY237830.1|betalactams|Class_D_betalactamases|OXA	AAP69225.1 AY237830.1:1-831
NCBI	gi|37931483|gb|AY237830.1|betalactams|Class_D_betalactamases|OXA	gi|37931483|gb|AY237830.1|1-831
Resfinder	gi|37931483|gb|AY237830.1|betalactams|Class_D_betalactamases|OXA	blaOXA-47_1_AY237830
NCBI	Tmt|dfrA1_5_AJ238350|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|4688831|emb|AJ238350.1|77-550
Resfinder	Tmt|dfrA1_5_AJ238350|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA1_5_AJ238350
ARG-ANNOT	Bla|SHV-137|HQ661363|72-932|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-137:HQ661363:72-932:861
CARD	Bla|SHV-137|HQ661363|72-932|861|betalactams|Class_A_betalactamases|SHV	@phgb|HQ661363|71-932|ARO:3001181|SHV-137 [Klebsiella pneumoniae]
Lahey	Bla|SHV-137|HQ661363|72-932|861|betalactams|Class_A_betalactamases|SHV	AEI83430.1 HQ661363.1:72-932
NCBI	Bla|SHV-137|HQ661363|72-932|861|betalactams|Class_A_betalactamases|SHV	gi|338173766|gb|HQ661363.1|72-932
Resfinder	Bla|SHV-137|HQ661363|72-932|861|betalactams|Class_A_betalactamases|SHV	blaSHV-137_1_HQ661363
ARG-ANNOT	Gly|VanR-Pt|DQ018711|1-696|696|Glycopeptides|VanA-type_regulator|VANRA	(Gly)VanR-Pt:DQ018711:1-696:696
NCBI	Gly|VanR-Pt|DQ018711|1-696|696|Glycopeptides|VanA-type_regulator|VANRA	gi|66731642|gb|DQ018711.1|1-696
Resfinder	Gly|VanR-Pt|DQ018711|1-696|696|Glycopeptides|VanA-type_regulator|VANRA	VanR-Pt_5_DQ018711
ARG-ANNOT	Fos|Fcyn|FosB|AHLO01000073|63139-63558|417|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	(Fcyn)FosB:AHLO01000073:63139-63558:417
NCBI	Fos|Fcyn|FosB|AHLO01000073|63139-63558|417|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	gi|974161314|gb|CP012018.1|2547632-2548051 gi|974158397|gb|CP012015.1|2548444-2548863 gi|974155539|gb|CP012013.1|2556606-2557025 gi|974152716|gb|CP012012.1|2536372-2536791 gi|974149849|gb|CP012011.1|2604288-2604707 gi|941146344|gb|CP007676.1|2421903-2422322 gi|941142962|gb|CP007672.1|2421305-2421724 gi|941139768|gb|CP007657.1|2411395-2411814 gi|899756207|gb|CP012119.1|2346022-2345603 gi|899750970|gb|CP012120.1|1369464-1369045
ARG-ANNOT	MLS|LnuF|EU118119|1030-1851|822|MLS|Lincosamide_nucleotidyltransferases|LNUF	(MLS)LnuF:EU118119:1030-1851:822
CARD	MLS|LnuF|EU118119|1030-1851|822|MLS|Lincosamide_nucleotidyltransferases|LNUF	@phgb|NC_007682|9414-10236|ARO:3002879|linG [Escherichia coli]
NCBI	MLS|LnuF|EU118119|1030-1851|822|MLS|Lincosamide_nucleotidyltransferases|LNUF	gi|970861137|gb|KT449569.1|991-1812 gi|723217856|gb|KM278190.1|1073-1894 gi|704485737|gb|KJ186151.1|28907-29728 gi|556826131|gb|KF386160.1|954-1775 gi|347602583|gb|JF806502.1|1008-1829 gi|298364421|gb|HM132123.1|977-1798 gi|157063014|gb|EU118119.1|1030-1851 gi|116294654|gb|AY522431.4|9415-10236 gi|587656575|gb|KF921555.1|1543-2303 gi|318101668|gb|HQ680634.1|1-761
Resfinder	MLS|LnuF|EU118119|1030-1851|822|MLS|Lincosamide_nucleotidyltransferases|LNUF	lnu(F)_1_EU118119
ARG-ANNOT	gi|21388251|emb|AJ318094.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-94:AJ318094:1-861:861
CARD	gi|21388251|emb|AJ318094.1|betalactams|Class_A_betalactamases|TEM	@phgb|AJ318094|0-861|ARO:3000961|TEM-94 [Escherichia coli]
Lahey	gi|21388251|emb|AJ318094.1|betalactams|Class_A_betalactamases|TEM	CAC85661.1 AJ318094.1:1-861
NCBI	gi|21388251|emb|AJ318094.1|betalactams|Class_A_betalactamases|TEM	gi|695208629|ref|NG_035627.1|1-861
Resfinder	gi|21388251|emb|AJ318094.1|betalactams|Class_A_betalactamases|TEM	blaTEM-94_1_AJ318094
CARD	CARD|pvgb|NC_003197|4038854-4041269|ARO:3003307|Salmonella|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	@pvgb|NC_003197|4038854-4041269|ARO:3003307|Salmonella serovars gyrB conferring resistance to fluoroquinolone [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	CARD|pvgb|NC_003197|4038854-4041269|ARO:3003307|Salmonella|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	gi|981191958|emb|LN999997.1|1333152-1330737 gi|973795115|gb|AE006468.2|4038868-4041283 gi|928084184|gb|CP012681.1|3991160-3993575 gi|821161554|gb|CP011428.1|4066861-4069276 gi|808186398|gb|CP007523.1|4724540-4726955 gi|777182157|emb|LN829403.1|22758-25173 gi|764057510|gb|CP007235.1|4811518-4813933 gi|674281104|gb|CP009102.1|3974787-3977202 gi|661245796|dbj|AP014565.1|4202699-4205114 gi|618631222|gb|CP007581.1|4072731-4075146
NCBI	Flq|QnrB10_8_HM439644|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695214163|ref|NG_036745.1|1-645
Resfinder	Flq|QnrB10_8_HM439644|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB10_8_HM439644
ARG-ANNOT	1707|EU259884.2|EU259884|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA1:JQ794607:474:59-532
NCBI	1707|EU259884.2|EU259884|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|975003027|gb|CP010829.1|4114129-4113656 gi|963329722|gb|KT316807.1|102-575 gi|963329696|gb|KT316806.1|114-587 gi|960865004|gb|CP012043.1|242601-243074 gi|957647579|dbj|AP017302.1|413522-413049 gi|954171665|gb|KT151664.1|12210-12683 gi|954171562|gb|KT151663.1|12210-12683 gi|954171278|gb|KT151660.1|12210-12683 gi|953271705|gb|KT175897.1|101-574 gi|953271701|gb|KT175896.1|91-564
Resfinder	1707|EU259884.2|EU259884|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA1_1_X00926
ARG-ANNOT	Bla|OXY1a|Y17715|147-1022|876|betalactams|Class_A_betalactamases|OXY	(Bla)OXY1a:Y17715:147-1022:876
CARD	Bla|OXY1a|Y17715|147-1022|876|betalactams|Class_A_betalactamases|OXY	@phgb|Y17715|146-1022|ARO:3002394|OXY-1-6 [Klebsiella oxytoca]
NCBI	Bla|OXY1a|Y17715|147-1022|876|betalactams|Class_A_betalactamases|OXY	gi|4775479|emb|Y17715.1|147-1022
Resfinder	Bla|OXY1a|Y17715|147-1022|876|betalactams|Class_A_betalactamases|OXY	blaOXY-1-6_6_Y17715
ARG-ANNOT	Bla|SHV-77|AM176552|31-891|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-77:AM176552:31-891:861
CARD	Bla|SHV-77|AM176552|31-891|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176552|30-891|ARO:3001131|SHV-77 [Klebsiella pneumoniae]
Lahey	Bla|SHV-77|AM176552|31-891|861|betalactams|Class_A_betalactamases|SHV	CAJ47132.2 AM176552.2:31-891
NCBI	Bla|SHV-77|AM176552|31-891|861|betalactams|Class_A_betalactamases|SHV	gi|160948448|emb|AM176552.2|31-891
ARG-ANNOT	Flq|QnrA6|DQ151889|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	(Flq)QnrA6:DQ151889:1-657:657
CARD	Flq|QnrA6|DQ151889|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	@phgb|DQ151889|0-657|ARO:3002712|QnrA6 [Proteus mirabilis]
NCBI	Flq|QnrA6|DQ151889|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	gi|392056095|gb|JN103331.1|3876-4532 gi|695200471|ref|NG_036144.1|1-657
Resfinder	Flq|QnrA6|DQ151889|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	QnrA6_1_DQ151889
ARG-ANNOT	Bla|cfiA15|AF429432|1501-2250|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA15:AF429432:1501-2250:750
NCBI	Bla|cfiA15|AF429432|1501-2250|750|betalactams|Class_B_betalactamases|CFIA	gi|22135032|gb|AF429432.1|1501-2250
ARG-ANNOT	Bla|CMY-57|HQ285243|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-57:HQ285243:1-1146:1146
CARD	Bla|CMY-57|HQ285243|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|HQ285243|0-1146|ARO:3002068|CMY-57 [Escherichia coli]
Lahey	Bla|CMY-57|HQ285243|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ADP37961.1 HQ285243.1:1-1146
NCBI	Bla|CMY-57|HQ285243|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|310894148|gb|HQ285243.1|1-1146
Resfinder	Bla|CMY-57|HQ285243|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-57_1_HQ285243
CARD	CARD|phgb|EU408355|24321-25482|ARO:3002492|LRA-18|betalactams|Class_B_betalactamases|LRA	@phgb|EU408355|24321-25482|ARO:3002492|LRA-18 [uncultured bacterium BLR18]
NCBI	CARD|phgb|EU408355|24321-25482|ARO:3002492|LRA-18|betalactams|Class_B_betalactamases|LRA	gi|169647650|gb|EU408355.1|24322-25483
CARD	AGly|X13543.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|X13543|185-1046|ARO:3002533|AAC(3)-IIa [Plasmid pWP113a]
NCBI	AGly|X13543.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|45943|emb|X13543.1|186-1046
ARG-ANNOT	Bla|SHV-24|AB023477|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-24:AB023477:1-861:861
CARD	Bla|SHV-24|AB023477|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AB023477|0-861|ARO:3001082|SHV-24 [Escherichia coli]
Lahey	Bla|SHV-24|AB023477|1-861|861|betalactams|Class_A_betalactamases|SHV	BAA84973.1 AB023477.1:1-861
NCBI	Bla|SHV-24|AB023477|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|6009581|dbj|AB023477.1|1-861
Resfinder	Bla|SHV-24|AB023477|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-24_1_AB023477
ARG-ANNOT	Bla|OXA-231|JQ326200|1-828|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-231:JQ326200:1-828:828
CARD	Bla|OXA-231|JQ326200|1-828|828|betalactams|Class_D_betalactamases|OXA	@phgb|JQ326200|193-1021|ARO:3001670|OXA-231 [Acinetobacter baumannii]
Lahey	Bla|OXA-231|JQ326200|1-828|828|betalactams|Class_D_betalactamases|OXA	AFG29918.1 JQ326200.2:194-1021
NCBI	Bla|OXA-231|JQ326200|1-828|828|betalactams|Class_D_betalactamases|OXA	gi|567943236|gb|JQ326200.2|194-1021 gi|386276162|gb|JQ676953.1|1-828
Resfinder	Bla|OXA-231|JQ326200|1-828|828|betalactams|Class_D_betalactamases|OXA	blaOXA-231_1_JQ326200
CARD	Gly|FJ872411.1|gene45|Glycopeptides|VanE-type_regulator|VANSE	@phgb|FJ872411|44192-45266|ARO:3002935|vanSE [Enterococcus faecalis]
NCBI	Gly|FJ872411.1|gene45|Glycopeptides|VanE-type_regulator|VANSE	gi|229892433|gb|FJ872411.1|44193-45266
NCBI	Sul|sul1_20_JF262165|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|817614502|gb|KF483599.2|47041-47880 gi|730910660|gb|KM921776.1|20926-21765 gi|602249473|gb|KC118540.6|67243-68082 gi|484355510|gb|FJ172370.5|47759-48598 gi|325301724|gb|JF262165.1|2493-3332 gi|169147133|emb|CU459141.1|3651456-3650617 gi|85813394|emb|CT025832.1|51315-52154
Resfinder	Sul|sul1_20_JF262165|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_20_JF262165
CARD	CARD|phgb|X02393|96-960|ARO:3003061|viomycin|Mycobacterium_tuberculosis-specific_Drug|Viomycin_phosphotransferases|VPH	@phgb|X02393|96-960|ARO:3003061|viomycin phosphotransferase [Streptomyces vinaceus]
NCBI	CARD|phgb|X02393|96-960|ARO:3003061|viomycin|Mycobacterium_tuberculosis-specific_Drug|Viomycin_phosphotransferases|VPH	gi|32967975|gb|AY263398.1|29539-28675 gi|1437495|emb|X99314.1|1144-2008 gi|48002|emb|X02393.1|97-961 gi|286143569|gb|GU384135.1|1-570 gi|268309235|gb|CP001738.1|2908836-2908808
ARG-ANNOT	gi|341575434|gb|JN051143.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-140:JN051143:1-861:861
CARD	gi|341575434|gb|JN051143.1|betalactams|Class_A_betalactamases|SHV	@phgb|JN051143|0-861|ARO:3001182|SHV-140 [Klebsiella pneumoniae]
NCBI	gi|341575434|gb|JN051143.1|betalactams|Class_A_betalactamases|SHV	gi|341575434|gb|JN051143.1|1-861
Resfinder	gi|341575434|gb|JN051143.1|betalactams|Class_A_betalactamases|SHV	blaSHV-140_1_JN051143
ARG-ANNOT	Bla|OXA-50|AM117128|1-789|789|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-50:AM117128:1-789:789
NCBI	Bla|OXA-50|AM117128|1-789|789|betalactams|Class_D_betalactamases|OXA	gi|145651396|emb|AM117128.2|1-789
CARD	CARD|phgb|U46859|24294-25527|ARO:3003048|rosA|Cationic_antimicrobial_peptides|Cationic_antimicrobial_peptide_efflux_pumps|rosA	@phgb|U46859|24294-25527|ARO:3003048|rosA [Yersinia enterocolitica (type O:8)]
NCBI	CARD|phgb|U46859|24294-25527|ARO:3003048|rosA|Cationic_antimicrobial_peptides|Cationic_antimicrobial_peptide_efflux_pumps|rosA	gi|1197638|gb|U46859.1|YEU46859|24295-25528
NCBI	MLS|vatE_10_AY043212|MLS|Streptogramin_A_O-acetyltransferase|VATE	gi|15266481|gb|AY043212.1|1-645
Resfinder	MLS|vatE_10_AY043212|MLS|Streptogramin_A_O-acetyltransferase|VATE	vat(E)_10_AY043212
NCBI	AGly|str_3_AM932524|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|695220799|ref|NG_039568.1|12853-13416 gi|196158933|emb|AM932524.1|10852-11415 gi|190350257|emb|AM931300.1|14583-14020 gi|124012095|emb|AM410096.1|8647-8084 gi|121490884|emb|AM296544.1|8647-8084 gi|50980339|gb|AY592978.1|51-422
Resfinder	AGly|str_3_AM932524|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	str_3_AM932524
ARG-ANNOT	Bla|OXA-219|JN215211|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-219:JN215211:1-825:825
CARD	Bla|OXA-219|JN215211|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|JN215211|0-825|ARO:3001668|OXA-219 [Acinetobacter baumannii]
Lahey	Bla|OXA-219|JN215211|1-825|825|betalactams|Class_D_betalactamases|OXA	AEL17179.1 JN215211.1:1-825
NCBI	Bla|OXA-219|JN215211|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|342219054|gb|JN215211.1|1-825
Resfinder	Bla|OXA-219|JN215211|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-219_1_JN215211
NCBI	Tet|tetE_2_EF471995|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	gi|146335259|gb|EF471995.1|1-1170 gi|327195566|gb|HQ399593.1|1-273 gi|296044842|gb|HM041202.1|195-1 gi|296044846|gb|HM041204.1|189-1
Resfinder	Tet|tetE_2_EF471995|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	tet(E)_2_EF471995
CARD	AGly|aadA11_1_AY144590|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AY758206|2743-3589|ARO:3002611|aadA11 [Pseudomonas aeruginosa]
NCBI	AGly|aadA11_1_AY144590|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|617018994|gb|KJ420613.1|1807-2652 gi|409183972|gb|JX494726.1|1043-1888 gi|322719601|gb|HQ202807.1|949-1794 gi|289064119|gb|GQ281704.1|15847-16692 gi|260513014|gb|GQ900749.1|1106-1951 gi|225353257|gb|FJ711659.1|238-1083 gi|224760820|gb|FJ715944.1|1116-1961 gi|148717277|dbj|AB287977.1|89-934 gi|24711041|gb|AY144590.1|1-846 gi|54300643|gb|AY758206.1|2744-3589
Resfinder	AGly|aadA11_1_AY144590|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA11_1_AY144590
ARG-ANNOT	Bla|CTX-M-1|X92506|63-938|866|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-1:X92506:63-938:866
CARD	Bla|CTX-M-1|X92506|63-938|866|betalactams|Class_A_betalactamases|CTX	@phgb|X92506|0-876|ARO:3001864|CTX-M-1 [Escherichia coli]
Lahey	Bla|CTX-M-1|X92506|63-938|866|betalactams|Class_A_betalactamases|CTX	CAA63262.1 X92506.1:63-938
NCBI	Bla|CTX-M-1|X92506|63-938|866|betalactams|Class_A_betalactamases|CTX	gi|933686806|gb|KT779550.1|2454-1579 gi|848613079|gb|KR494248.1|85037-84162 gi|822874760|gb|KM052220.1|32297-33172 gi|756791690|gb|KM377240.1|86734-87609 gi|756791559|gb|KM377239.1|98932-99807 gi|756791433|gb|KM377238.1|92102-91227 gi|745795237|gb|CP007651.1|102590-101715 gi|700369833|gb|KJ563250.1|67992-67117 gi|695941297|gb|CP009580.1|9714-10589 gi|695941297|gb|CP009580.1|117241-116366 gi|681884821|gb|KM094197.1|143-1018
Resfinder	Bla|CTX-M-1|X92506|63-938|866|betalactams|Class_A_betalactamases|CTX	blaCTX-M-1_6_DQ915955
CARD	CARD|phgb|NC_002516.2|4119269-4120373|ARO:3003692|mexJ|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXJ	@phgb|NC_002516.2|4119269-4120373|ARO:3003692|mexJ [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516.2|4119269-4120373|ARO:3003692|mexJ|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXJ	gi|984361056|gb|CP008873.1|6788109-6789212 gi|975043142|gb|CP013989.1|1407230-1406127 gi|974353108|gb|CP008870.1|904468-903365 gi|974327848|gb|CP008866.1|2090864-2091967 gi|974319461|gb|CP008865.1|4199039-4197936 gi|971497891|gb|CP012901.1|5418626-5419729 gi|946706141|emb|LN870292.1|1405249-1404146 gi|927993303|gb|CP012679.1|1430208-1429105 gi|927226644|gb|CP004054.2|1430209-1429106 gi|926451317|emb|LN871187.1|1396567-1395464
ARG-ANNOT	Bla|CMY-78|JQ733575|1029-2173|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-78:JQ733575:1028-2173:1146
CARD	Bla|CMY-78|JQ733575|1029-2173|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ733575|1027-2173|ARO:3002091|CMY-78 [Citrobacter freundii]
Lahey	Bla|CMY-78|JQ733575|1029-2173|1146|betalactams|Class_C_betalactamases|CMY	AFK73443.1 JQ733575.1:1028-2173
NCBI	Bla|CMY-78|JQ733575|1029-2173|1146|betalactams|Class_C_betalactamases|CMY	gi|388564843|gb|JQ733575.1|1028-2173
Resfinder	Bla|CMY-78|JQ733575|1029-2173|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-78_1_JQ733575
NCBI	Sul|sul1_22_AY115475|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|21898660|gb|AY115475.1|5130-5969 gi|974751547|gb|KU130294.1|233473-234001 gi|982189197|gb|CP013993.1|5430539-5431065
Resfinder	Sul|sul1_22_AY115475|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_22_AY115475
CARD	Tet|tetH_3_Y15510|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	@phgb|Y15510|0-1203|ARO:3000175|tetH [Pasteurella multocida]
NCBI	Tet|tetH_3_Y15510|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	gi|785798809|gb|CP011099.1|1616310-1617512 gi|785795794|gb|CP011098.1|1616287-1617489 gi|678222343|gb|KJ909292.1|5117-6319 gi|575439963|gb|CP006942.1|974729-973527 gi|511255433|gb|KC734562.1|4318-5520 gi|511255399|gb|KC734561.1|3612-2410 gi|511255369|gb|KC734560.1|4418-5620 gi|481063295|gb|CP005383.1|2178983-2180185 gi|205320734|gb|FJ012880.1|35950-34748 gi|168825335|gb|CP000947.1|1979596-1980798
Resfinder	Tet|tetH_3_Y15510|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	tet(H)_3_Y15510
NCBI	gi|296955|emb|X65254.1|betalactams|Class_A_betalactamases|TEM	gi|296955|emb|X65254.1|175-1044
NCBI	gi|110630022|gb|DQ810789.1|betalactams|Class_A_betalactamases|CTX	gi|918463128|gb|KP987217.1|5569-6671 gi|818476716|gb|KJ866866.1|84525-83423 gi|668347635|dbj|AB976578.1|1036-2138 gi|668347614|dbj|AB976573.1|2355-3457 gi|256576431|gb|GQ456159.1|24-1126 gi|110630022|gb|DQ810789.1|1-1103 gi|971338783|gb|CP006659.2|2745049-2744871 gi|958102843|emb|LN824133.1|127585-127763 gi|958102843|emb|LN824133.1|1153905-1154083 gi|958102843|emb|LN824133.1|3347218-3347040 gi|828906158|gb|CP011578.1|655965-656143 gi|828906158|gb|CP011578.1|849677-849499
ARG-ANNOT	gi|401871184|gb|JX121130.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-163:JX121130:1-858:858
CARD	gi|401871184|gb|JX121130.1|betalactams|Class_A_betalactamases|SHV	@phgb|JX121130|0-858|ARO:3001202|SHV-163 [Klebsiella pneumoniae]
Lahey	gi|401871184|gb|JX121130.1|betalactams|Class_A_betalactamases|SHV	AFQ23969.1 JX121130.1:1-858
NCBI	gi|401871184|gb|JX121130.1|betalactams|Class_A_betalactamases|SHV	gi|401871184|gb|JX121130.1|1-858 gi|378829040|gb|JQ388884.1|1-856
Resfinder	gi|401871184|gb|JX121130.1|betalactams|Class_A_betalactamases|SHV	blaSHV-163_1_JX121130
ARG-ANNOT	Flq|QnrB6|EF520349|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB6:EF520349:37-681:645
CARD	Flq|QnrB6|EF520349|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EF520349|0-681|ARO:3002720|QnrB6 [Pantoea agglomerans]
NCBI	Flq|QnrB6|EF520349|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|145581571|gb|EF517946.1|1-681
Resfinder	Flq|QnrB6|EF520349|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB6_1_EF520349
ARG-ANNOT	934|X51546.1|X51546|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	(AGly)Sat-2A:X51546:518-1042:525
CARD	934|X51546.1|X51546|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	@phgb|AB211124|0-525|ARO:3002895|sat-1 [Escherichia coli]
NCBI	934|X51546.1|X51546|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	gi|975003027|gb|CP010829.1|4113561-4113037 gi|970567980|dbj|LC107426.1|696-1220 gi|963329722|gb|KT316807.1|670-1194 gi|963329696|gb|KT316806.1|682-1206 gi|960865004|gb|CP012043.1|243169-243693 gi|953271705|gb|KT175897.1|669-1193 gi|953271701|gb|KT175896.1|659-1183 gi|952545745|dbj|LC095818.1|122-646 gi|948288901|gb|KR259326.1|1434-1958 gi|948288896|gb|KR259325.1|1436-1960
ARG-ANNOT	Bla|KPC-2|JN048642|127-1008|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-2:JN048642:127-1008:882
CARD	Bla|KPC-2|JN048642|127-1008|882|betalactams|Class_A_betalactamases|KPC	@phgb|AY034847|5-887|ARO:3002312|KPC-2 [Klebsiella pneumoniae];@phgb|NC_022346.1|17139-18021|ARO:3002312|KPC-2 [Pseudomonas aeruginosa]
Lahey	Bla|KPC-2|JN048642|127-1008|882|betalactams|Class_A_betalactamases|KPC	AAK70220.1 AY034847.1:6-887
NCBI	Bla|KPC-2|JN048642|127-1008|882|betalactams|Class_A_betalactamases|KPC	gi|873464424|gb|KR014106.1|9900-10781 gi|962148899|gb|KU176944.1|36853-37734 gi|961666360|gb|KT185451.1|86330-85449 gi|966624506|gb|CP012000.1|12170-13051 gi|966624404|gb|CP011999.1|28772-27891 gi|959190550|gb|CP013325.1|38357-37476 gi|941349957|gb|KP726894.1|3972-3091 gi|918463219|gb|KP987218.1|19740-18859 gi|918462945|gb|KP987215.1|6232-7113 gi|817046807|gb|KP893385.1|125822-124941
Resfinder	Bla|KPC-2|JN048642|127-1008|882|betalactams|Class_A_betalactamases|KPC	blaKPC-2_1_AY034847
ARG-ANNOT	Bla|TEM-150|AM183304|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-150:AM183304:209-1069:861
CARD	Bla|TEM-150|AM183304|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AM183304|208-1069|ARO:3001017|TEM-150 [Escherichia coli]
Lahey	Bla|TEM-150|AM183304|209-1069|861|betalactams|Class_A_betalactamases|TEM	CAJ66089.1 AM183304.1:209-1069
NCBI	Bla|TEM-150|AM183304|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|208970778|gb|FJ349255.1|215-1075 gi|166157193|emb|AM183304.1|209-1069
Resfinder	Bla|TEM-150|AM183304|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-150_1_AM183304
CARD	CARD|phgb|EU250284|954-2004|ARO:3002910|vanL|Glycopeptides|VanL-type_resistance_protein|VANL	@phgb|EU250284|954-2004|ARO:3002910|vanL [Enterococcus faecalis]
NCBI	CARD|phgb|EU250284|954-2004|ARO:3002910|vanL|Glycopeptides|VanL-type_resistance_protein|VANL	gi|160947039|gb|EU250284.1|955-2005
NCBI	Flq|AE000516.2|gene6|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|7302-9818 gi|984989958|gb|CP010339.1|7302-9818 gi|984985728|gb|CP010338.1|7302-9818 gi|984972452|gb|CP010335.1|8658-11174 gi|918453982|gb|CP012090.1|8660-11176 gi|755917060|gb|CP007299.1|8660-11176 gi|702068662|emb|HG813240.1|8660-11176 gi|686571222|gb|CP009426.1|8660-11176 gi|669122404|gb|CP008983.1|4082183-4084699 gi|669114883|gb|CP008981.1|4082182-4084698
NCBI	Flq|DQ435306.1|orf0|gene|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	gi|695213299|ref|NG_036595.1|3354-4010 gi|695213288|ref|NG_036594.1|3354-4010 gi|90289592|gb|DQ435306.1|1-657 gi|160213053|gb|EU247883.1|1-578
ARG-ANNOT	Bla|OXA-9|NC_015515|451-1290|840|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-9:NC_015515:451-1290:840
NCBI	Bla|OXA-9|NC_015515|451-1290|840|betalactams|Class_D_betalactamases|OXA	gi|943457735|gb|KT818627.1|73399-72560 gi|943457735|gb|KT818627.1|134990-134151 gi|959195734|gb|CP013326.1|59282-58443 gi|959190351|gb|CP013324.1|108736-107897 gi|902611595|gb|CP011978.1|72445-73284 gi|828971542|gb|CP011645.1|72483-73322 gi|828965729|gb|CP011639.1|7576-6737 gi|828952302|gb|CP011622.1|126176-127015 gi|828952208|gb|CP011621.1|59282-58443 gi|800908878|gb|KP345882.1|49073-49912 gi|758961176|gb|CP010881.1|23980-23141
Resfinder	Bla|OXA-9|NC_015515|451-1290|840|betalactams|Class_D_betalactamases|OXA	blaOXA-9_2_JF703130
NCBI	MLS|ermC_1_V01278|MLS|23S_rRNA_methyltransferases|ERMC	gi|909776345|gb|KP065813.1|3571-2837 gi|749502733|gb|KP255997.1|4304-3570 gi|749502730|gb|KP255996.1|3737-4471 gi|671774829|gb|KM017875.1|1306-572 gi|658131576|emb|HG380318.1|812-78 gi|378968505|gb|AY661563.2|5538-4804 gi|378968504|gb|AF424805.2|3478-4212 gi|375314803|gb|JN798465.1|7712-6978 gi|375331809|dbj|AB517728.1|3562-2828 gi|353127761|gb|JF968527.1|1298-564
Resfinder	MLS|ermC_1_V01278|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_1_V01278
CARD	Tet|JQ740052.1|gene2|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	@phgb|JQ740052|2108-3329|ARO:3000567|tet40 [Streptococcus suis]
NCBI	Tet|JQ740052.1|gene2|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	gi|459385823|gb|CP003922.1|623616-624836 gi|388459702|gb|JQ740052.1|2109-3329 gi|379125708|gb|JQ280443.2|2109-3329 gi|356668625|gb|JN086171.1|2844-4064 gi|319757172|gb|CP002465.1|619591-620811 gi|379125718|gb|JQ280445.2|2109-3229 gi|379125718|gb|JQ280445.2|3221-3296
Lahey	gi|827882781|gb|KP868752.1|betalactams|Class_A_betalactamases|SHV	AKK23731.1 KP868752.1:1-861
NCBI	gi|827882781|gb|KP868752.1|betalactams|Class_A_betalactamases|SHV	gi|827882781|gb|KP868752.1|1-861
CARD	CARD|phgb|AF117743|0-780|ARO:3001077|SHV-19|betalactams|Class_A_betalactamases|SHV	@phgb|AF117743|0-780|ARO:3001077|SHV-19 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF117743|0-780|ARO:3001077|SHV-19|betalactams|Class_A_betalactamases|SHV	gi|6979147|gb|AF117743.1|AF117743|1-780
NCBI	Bla|LEN4_1_AY130287|betalactams|Class_A_betalactamases|LEN	gi|28192519|gb|AY130287.1|2-823
Resfinder	Bla|LEN4_1_AY130287|betalactams|Class_A_betalactamases|LEN	blaLEN4_1_AY130287
CARD	11|DQ679966.1|DQ679966|Multi-drug_resistance|Multi-drug_efflux_pumps|ACRB	@phgb|DQ679966|1515-4662|ARO:3000216|acrB [Enterobacter cloacae]
NCBI	11|DQ679966.1|DQ679966|Multi-drug_resistance|Multi-drug_efflux_pumps|ACRB	gi|110611189|gb|DQ679966.1|1516-4662
ARG-ANNOT	Bla|SHV-162|JX121129|1-858|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-162:JX121129:1-858:858
CARD	Bla|SHV-162|JX121129|1-858|858|betalactams|Class_A_betalactamases|SHV	@phgb|JX121129|0-858|ARO:3001201|SHV-162 [Klebsiella pneumoniae]
Lahey	Bla|SHV-162|JX121129|1-858|858|betalactams|Class_A_betalactamases|SHV	AFQ23968.1 JX121129.1:1-858
NCBI	Bla|SHV-162|JX121129|1-858|858|betalactams|Class_A_betalactamases|SHV	gi|401871182|gb|JX121129.1|1-858
Resfinder	Bla|SHV-162|JX121129|1-858|858|betalactams|Class_A_betalactamases|SHV	blaSHV-162_1_JX121129
CARD	Bla|AY822595.1|gene1|betalactams|Class_A_betalactamases|CTX	@phgb|AY822595|22-898|ARO:3001900|CTX-M-38 [Klebsiella pneumoniae]
Lahey	Bla|AY822595.1|gene1|betalactams|Class_A_betalactamases|CTX	AAV70602.1 AY822595.1:23-898
NCBI	Bla|AY822595.1|gene1|betalactams|Class_A_betalactamases|CTX	gi|548319340|gb|KF308562.1|23-898 gi|56069564|gb|AY822595.1|23-898
Resfinder	Bla|AY822595.1|gene1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-38_1_AY822595
ARG-ANNOT	gi|210061212|gb|FJ237366.1|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-6:FJ237366:41-1186:1146
CARD	gi|210061212|gb|FJ237366.1|betalactams|Class_C_betalactamases|ACT	@phgb|FJ237366|40-1186|ARO:3001825|ACT-6 [Klebsiella pneumoniae]
Lahey	gi|210061212|gb|FJ237366.1|betalactams|Class_C_betalactamases|ACT	ACJ05686.1 FJ237366.1:41-1186
NCBI	gi|210061212|gb|FJ237366.1|betalactams|Class_C_betalactamases|ACT	gi|695213699|ref|NG_036650.1|41-1186
Resfinder	gi|210061212|gb|FJ237366.1|betalactams|Class_C_betalactamases|ACT	blaACT-6_1_FJ237366
ARG-ANNOT	gi|260080602|gb|GQ853679.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-148:GQ853679:1-825:825
CARD	gi|260080602|gb|GQ853679.1|betalactams|Class_D_betalactamases|OXA	@phgb|GQ853679|0-825|ARO:3001453|OXA-148 [Acinetobacter baumannii]
Lahey	gi|260080602|gb|GQ853679.1|betalactams|Class_D_betalactamases|OXA	ACX31140.1 GQ853679.1:1-825
NCBI	gi|260080602|gb|GQ853679.1|betalactams|Class_D_betalactamases|OXA	gi|260080602|gb|GQ853679.1|1-825
Resfinder	gi|260080602|gb|GQ853679.1|betalactams|Class_D_betalactamases|OXA	blaOXA-148_1_GQ853679
NCBI	1592|HE616889.1|HE616889|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|984881271|gb|CP014215.1|2294836-2294282 gi|984881271|gb|CP014215.1|2307600-2307046 gi|982900370|gb|KT736121.1|2101-2655 gi|974022331|gb|CP013924.1|1438897-1439451 gi|969995259|gb|KT317079.1|978-1532 gi|969995242|gb|KT317078.1|2864-3418 gi|969995220|gb|KT317076.1|3839-4393 gi|969995200|gb|KT317075.1|5725-6279 gi|969972869|gb|KT354506.1|4830-5384 gi|961377543|gb|KT326691.1|2084-2638 gi|959195734|gb|CP013326.1|60739-60185
ARG-ANNOT	207|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETV	(Tet)TetV:AF030344:462-1721:1260
NCBI	207|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETV	gi|698956000|gb|CP009496.1|5286418-5287677 gi|698947717|gb|CP009495.1|5286436-5287695 gi|698938524|gb|CP009494.1|5286383-5287642 gi|399228992|gb|CP001663.1|5287951-5289210 gi|118168627|gb|CP000480.1|5286339-5287598 gi|2613095|gb|AF030344.1|AF030344|1721-462
ARG-ANNOT	Bla|OXA-90|EU547443|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-90:EU547443:1-825:825
CARD	Bla|OXA-90|EU547443|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|AM231719|0-825|ARO:3001650|OXA-90 [Acinetobacter baumannii]
Lahey	Bla|OXA-90|EU547443|1-825|825|betalactams|Class_D_betalactamases|OXA	CAJ77809.1 AM231719.1:1-825
NCBI	Bla|OXA-90|EU547443|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|168740378|emb|AM231719.1|1-825
Resfinder	Bla|OXA-90|EU547443|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-90_1_EU547443
ARG-ANNOT	Flq|QnrB49|JQ582718|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB49:JQ582718:1-681:681
CARD	Flq|QnrB49|JQ582718|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JQ582718|0-681|ARO:3002764|QnrB49 [Citrobacter freundii]
NCBI	Flq|QnrB49|JQ582718|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|380449325|gb|JQ582718.1|1-681
Resfinder	Flq|QnrB49|JQ582718|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB49_1_JQ582718
NCBI	Mdr|NC_010611.6236744|Multi-drug_resistance|MDR_regulator|MEXT	gi|984881271|gb|CP014215.1|842398-841409 gi|974022331|gb|CP013924.1|2926011-2927000 gi|827403829|gb|CP010779.1|2909104-2910093 gi|803657307|gb|CP007535.2|2970790-2971779 gi|615556143|gb|CP007577.1|3672054-3671065 gi|586958174|gb|CP006963.1|1166004-1165015 gi|546200742|dbj|AP013357.1|2914719-2915708 gi|522344435|gb|CP003849.1|1200102-1199113 gi|522324570|gb|CP003846.1|1195092-1194103 gi|407899266|gb|CP003856.1|1413739-1412750
CARD	CARD|phgb|U57969|1485-4617|ARO:3000801|mexD|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXD	@phgb|U57969|1485-4617|ARO:3000801|mexD [Pseudomonas aeruginosa]
NCBI	CARD|phgb|U57969|1485-4617|ARO:3000801|mexD|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXD	gi|1399756|gb|U57969.1|PAU57969|1486-4618
ARG-ANNOT	gi|8052260|emb|AJ239002.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-68:AJ239002:1-861:861
CARD	gi|8052260|emb|AJ239002.1|betalactams|Class_A_betalactamases|TEM	@phgb|AJ239002|0-861|ARO:3000935|TEM-68 [Klebsiella pneumoniae]
Lahey	gi|8052260|emb|AJ239002.1|betalactams|Class_A_betalactamases|TEM	CAB92324.1 AJ239002.1:1-861
NCBI	gi|8052260|emb|AJ239002.1|betalactams|Class_A_betalactamases|TEM	gi|695199644|ref|NG_035287.1|1-861
Resfinder	gi|8052260|emb|AJ239002.1|betalactams|Class_A_betalactamases|TEM	blaTEM-68_1_AJ239002
CARD	Bla|cphA2_6_AHU60294|betalactams|Class_B_betalactamases|CPHA	@phgb|U60294|0-765|ARO:3003099|cphA2 [Aeromonas hydrophila]
NCBI	Bla|cphA2_6_AHU60294|betalactams|Class_B_betalactamases|CPHA	gi|1401339|gb|U60294.1|AHU60294|1-765
Resfinder	Bla|cphA2_6_AHU60294|betalactams|Class_B_betalactamases|CPHA	cphA2_6_AHU60294
CARD	MLS|ermO_2_AJ223970|MLS|23S_rRNA_methyltransferases|ERMO	@phgb|AJ223970|20-800|ARO:3001303|ErmO [Streptomyces ambofaciens]
NCBI	MLS|ermO_2_AJ223970|MLS|23S_rRNA_methyltransferases|ERMO	gi|917646380|gb|CP012382.1|6295088-6295867 gi|3294230|emb|AJ223970.1|21-800
Resfinder	MLS|ermO_2_AJ223970|MLS|23S_rRNA_methyltransferases|ERMO	erm(O)_2_AJ223970
ARG-ANNOT	Phe|CatB8|AF227506|253-885|633|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	(Phe)CatB8:AF227506:253-885:633
CARD	Phe|CatB8|AF227506|253-885|633|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	@phgb|AF227506|252-885|ARO:3002680|catB8 [Klebsiella pneumoniae]
NCBI	Phe|CatB8|AF227506|253-885|633|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|984881271|gb|CP014215.1|2294189-2293557 gi|984881271|gb|CP014215.1|2306953-2306321 gi|974022331|gb|CP013924.1|1439544-1440176 gi|969995259|gb|KT317079.1|1625-2257 gi|969995242|gb|KT317078.1|3511-4143 gi|969995220|gb|KT317076.1|4486-5118 gi|969995200|gb|KT317075.1|6372-7004 gi|969972869|gb|KT354506.1|5477-6109 gi|806638998|gb|KM972593.1|2445-3077 gi|822874366|gb|KM655309.1|22204-22836 gi|827403829|gb|CP010779.1|1377411-1378043
Resfinder	Phe|CatB8|AF227506|253-885|633|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	catB8_1_AF227506
CARD	Flq|KF730652.1|gene1|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	@phgb|KF730652|0-657|ARO:3002797|QnrS8 [Klebsiella pneumoniae]
NCBI	Flq|KF730652.1|gene1|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|569533080|gb|KF730652.1|1-657
ARG-ANNOT	Bla|OXA-95|DQ519089|9-833|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-95:DQ519089:9-833:825
CARD	Bla|OXA-95|DQ519089|9-833|825|betalactams|Class_D_betalactamases|OXA	@phgb|DQ519089|8-833|ARO:3001630|OXA-95 [Acinetobacter baumannii]
Lahey	Bla|OXA-95|DQ519089|9-833|825|betalactams|Class_D_betalactamases|OXA	ABF47918.1 DQ519089.1:9-833
NCBI	Bla|OXA-95|DQ519089|9-833|825|betalactams|Class_D_betalactamases|OXA	gi|94960152|gb|DQ519089.1|9-833
Resfinder	Bla|OXA-95|DQ519089|9-833|825|betalactams|Class_D_betalactamases|OXA	blaOXA-95_1_DQ519089
ARG-ANNOT	Bla|OXA-237|JQ820241|1-831|831|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-237:JQ820241:1-831:831
CARD	Bla|OXA-237|JQ820241|1-831|831|betalactams|Class_D_betalactamases|OXA	@phgb|JQ820241|0-831|ARO:3001678|OXA-237 [Acinetobacter baumannii]
Lahey	Bla|OXA-237|JQ820241|1-831|831|betalactams|Class_D_betalactamases|OXA	AFH36331.1 JQ820241.1:1-831
NCBI	Bla|OXA-237|JQ820241|1-831|831|betalactams|Class_D_betalactamases|OXA	gi|383478989|gb|JQ820241.1|1-831
Resfinder	Bla|OXA-237|JQ820241|1-831|831|betalactams|Class_D_betalactamases|OXA	blaOXA-237_1_JQ820241
NCBI	Flq|FQ312006.1|gene1417|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|301168602|emb|FQ312006.1|1476045-1473403
ARG-ANNOT	Bla|CTX-M-68|EU177100|5-880|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-68:EU177100:5-880:876
CARD	Bla|CTX-M-68|EU177100|5-880|876|betalactams|Class_A_betalactamases|CTX	@phgb|EU177100|4-880|ARO:3001929|CTX-M-68 [Klebsiella sp. ARS06-441]
Lahey	Bla|CTX-M-68|EU177100|5-880|876|betalactams|Class_A_betalactamases|CTX	ABV81082.1 EU177100.1:5-880
NCBI	Bla|CTX-M-68|EU177100|5-880|876|betalactams|Class_A_betalactamases|CTX	gi|157812671|gb|EU177100.1|5-880
Resfinder	Bla|CTX-M-68|EU177100|5-880|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-68_1_EU177100
ARG-ANNOT	gi|260080606|gb|GQ853681.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-150:GQ853681:1-825:825
CARD	gi|260080606|gb|GQ853681.1|betalactams|Class_D_betalactamases|OXA	@phgb|GQ853681|0-825|ARO:3001455|OXA-150 [Acinetobacter baumannii]
Lahey	gi|260080606|gb|GQ853681.1|betalactams|Class_D_betalactamases|OXA	ACX31142.1 GQ853681.1:1-825
NCBI	gi|260080606|gb|GQ853681.1|betalactams|Class_D_betalactamases|OXA	gi|260080606|gb|GQ853681.1|1-825
Resfinder	gi|260080606|gb|GQ853681.1|betalactams|Class_D_betalactamases|OXA	blaOXA-150_1_GQ853681
ARG-ANNOT	Bla|TEM-83|AF427129|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-83:AF427129:209-1069:861
CARD	Bla|TEM-83|AF427129|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF427129|208-1069|ARO:3000950|TEM-83 [Escherichia coli]
Lahey	Bla|TEM-83|AF427129|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAL29435.1 AF427129.1:209-1069
NCBI	Bla|TEM-83|AF427129|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|16798373|gb|AF427129.1|AF427129|209-1069
Resfinder	Bla|TEM-83|AF427129|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-83_1_AF427129
CARD	gi|725539564|gb|KM433671.1|betalactams|Class_D_betalactamases|OXA	@phgb|KM433671|0-822|ARO:3003160|OXA-422 [Acinetobacter baumannii]
Lahey	gi|725539564|gb|KM433671.1|betalactams|Class_D_betalactamases|OXA	AIY30331.1 KM433671.1:1-822
NCBI	gi|725539564|gb|KM433671.1|betalactams|Class_D_betalactamases|OXA	gi|725539564|gb|KM433671.1|1-822
CARD	CARD|phgb|HQ398215|244-1120|ARO:3001961|CTX-M-102|betalactams|Class_A_betalactamases|CTX	@phgb|HQ398215|244-1120|ARO:3001961|CTX-M-102 [Escherichia coli]
NCBI	CARD|phgb|HQ398215|244-1120|ARO:3001961|CTX-M-102|betalactams|Class_A_betalactamases|CTX	gi|323709062|gb|HQ398215.1|245-1121
NCBI	1090|DQ303459.3|DQ303459|betalactams|Class_A_betalactamases|CTX	gi|90019040|gb|DQ303459.3|3175-4063 gi|908301814|gb|CP012165.1|2401724-2401398 gi|908276372|gb|CP010376.2|2363798-2363472 gi|908266278|gb|CP012170.1|86929-87255 gi|828977725|gb|CP011650.1|1898170-1897844 gi|828945832|gb|CP011618.1|579945-579619 gi|828945832|gb|CP011618.1|4494210-4493884 gi|828945622|gb|CP011617.1|71779-72105 gi|828933802|gb|CP011601.1|275235-274909 gi|828927642|gb|CP011597.1|560219-559893 gi|828927436|gb|CP011596.1|70452-70778
ARG-ANNOT	928|X15852.1|X15852|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-I:X15852:1250-1783:534
CARD	928|X15852.1|X15852|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|U04610|0-534|ARO:3002528|AAC(3)-Ia [Cloning vector pUCGM]
NCBI	928|X15852.1|X15852|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|963885527|gb|KT351864.1|954-421 gi|943359464|gb|KP696472.1|6068-6601 gi|846281215|gb|KP272129.1|3529-2996 gi|836714836|gb|KP899257.1|3078-2545 gi|752295896|gb|KM887142.1|5420-4887 gi|732555979|gb|KM576780.1|2249-1716 gi|701462426|dbj|AB982126.1|6767-7300 gi|701462421|dbj|AB982125.1|6694-7227 gi|701462416|dbj|AB982124.1|6739-7272 gi|699981662|gb|KM201426.1|1668-1135
Resfinder	928|X15852.1|X15852|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	aac(3)-Ia_1_X15852
ARG-ANNOT	37|X53401.1|X53401|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|OTRA	(Tet)otrA:X53401:349-2341:1992
CARD	37|X53401.1|X53401|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|OTRA	@phgb|X53401|0-1992|ARO:3002891|otrA [Streptomyces rimosus]
NCBI	37|X53401.1|X53401|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|OTRA	gi|961374318|gb|KT291434.1|1-1992 gi|74053557|gb|DQ143963.2|22257-24248 gi|47472|emb|X53401.1|349-2340
Resfinder	37|X53401.1|X53401|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|OTRA	otr(A)_1_X53401
ARG-ANNOT	Bla|TEM-187|HM246246|212-1069|858|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-187:HM246246:212-1069:858
CARD	Bla|TEM-187|HM246246|212-1069|858|betalactams|Class_A_betalactamases|TEM	@phgb|HM246246|211-1069|ARO:3001047|TEM-187 [Proteus mirabilis]
Lahey	Bla|TEM-187|HM246246|212-1069|858|betalactams|Class_A_betalactamases|TEM	ADM61585.1 HM246246.1:212-1069
NCBI	Bla|TEM-187|HM246246|212-1069|858|betalactams|Class_A_betalactamases|TEM	gi|695224309|ref|NG_041046.1|212-1069 gi|808157946|gb|KP870110.1|4250-4200
Resfinder	Bla|TEM-187|HM246246|212-1069|858|betalactams|Class_A_betalactamases|TEM	blaTEM-187_1_HM246246
NCBI	ACou|AF205854.1|orf0|gene|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|gyrB|RequiresSNPConfirmation	gi|385203109|gb|AF170880.4|26043-28076 gi|28569046|gb|AF205854.1|377-2410
ARG-ANNOT	107|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET43	(Tet)Tet-43:GQ244501:60-1619:1560
NCBI	107|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET43	gi|242129309|gb|GQ244501.1|1619-60
NCBI	Tet|tetO_3_Y07780|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETO	gi|920768663|gb|CP011419.1|1142579-1140660 gi|821177616|gb|CP002007.2|1201193-1203112 gi|295092884|emb|FP929039.1|815149-817068 gi|1532066|emb|Y07780.1|125-2044
Resfinder	Tet|tetO_3_Y07780|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETO	tet(O)_3_Y07780
CARD	gi|256862203|gb|GQ390809.1|betalactams|Class_A_betalactamases|SHV	@phgb|GQ390809|0-813|ARO:3001174|SHV-127 [Klebsiella pneumoniae]
NCBI	gi|256862203|gb|GQ390809.1|betalactams|Class_A_betalactamases|SHV	gi|256862203|gb|GQ390809.1|1-813
ARG-ANNOT	gi|209865481|gb|FJ262599.1|betalactams|Class_C_betalactamases|MOX	(Bla)MOX-4:FJ262599:1-1149:1149
CARD	gi|209865481|gb|FJ262599.1|betalactams|Class_C_betalactamases|MOX	@phgb|FJ262599|0-1149|ARO:3002184|MOX-4 [Aeromonas caviae]
Lahey	gi|209865481|gb|FJ262599.1|betalactams|Class_C_betalactamases|MOX	ACI89425.1 FJ262599.1:1-1149
NCBI	gi|209865481|gb|FJ262599.1|betalactams|Class_C_betalactamases|MOX	gi|209865481|gb|FJ262599.1|1-1149
Resfinder	gi|209865481|gb|FJ262599.1|betalactams|Class_C_betalactamases|MOX	blaMOX-4_1_FJ262599
ARG-ANNOT	Bla|OXA-99|DQ888718|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-99:DQ888718::1-825:825
CARD	Bla|OXA-99|DQ888718|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|DQ888718|0-825|ARO:3001649|OXA-99 [Acinetobacter baumannii]
Lahey	Bla|OXA-99|DQ888718|1-825|825|betalactams|Class_D_betalactamases|OXA	ABI53716.1 DQ888718.1:1-825
NCBI	Bla|OXA-99|DQ888718|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|114159817|gb|DQ888718.1|1-825
Resfinder	Bla|OXA-99|DQ888718|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-99_1_DQ888718
NCBI	MLS|vgaA_2_FN546261|MLS|ABC_transporter|VGA	gi|641688293|emb|HG799495.1|70853-70880 gi|321156851|emb|FR671404.1|6271-6244
Resfinder	MLS|vgaA_2_FN546261|MLS|ABC_transporter|VGA	vga(A)_2_FN546261
CARD	CARD|phgb|JQ064560|0-1536|ARO:3000448|qepA|Fluoroquinolones|Quinolone_active_efflux|QEPA	@phgb|JQ064560|0-1536|ARO:3000448|qepA [Enterobacter aerogenes]
NCBI	CARD|phgb|JQ064560|0-1536|ARO:3000448|qepA|Fluoroquinolones|Quinolone_active_efflux|QEPA	gi|873464120|gb|KR259134.1|4952-3417 gi|873464095|gb|KR259133.1|2760-1225 gi|873464075|gb|KR259132.1|8465-6930 gi|873464057|gb|KR259131.1|8587-7052 gi|873464024|gb|KR259130.1|8340-6805 gi|374434362|gb|JQ064560.1|1-1536 gi|613447788|gb|KJ437626.1|1-596
ARG-ANNOT	Phe|CatB5|AAWG01000020|33604-34233|630|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	(Phe)CatB5:AAWG01000020:33604-34233:630
CARD	gi|803434319|dbj|LC037981.1|betalactams|Class_D_betalactamases|OXA	@phgb|LC037981|0-801|ARO:3003610|OXA-454 [Delftia acidovorans]
Lahey	gi|803434319|dbj|LC037981.1|betalactams|Class_D_betalactamases|OXA	BAR45714.1 LC037981.1:1-801
NCBI	gi|803434319|dbj|LC037981.1|betalactams|Class_D_betalactamases|OXA	gi|803434319|dbj|LC037981.1|1-801
CARD	CARD|phgb|DQ212986|2258-2966|ARO:3002926|vanRG|Glycopeptides|VanG-type_regulator|VANRG	@phgb|DQ212986|2258-2966|ARO:3002926|vanRG [Enterococcus faecalis]
NCBI	CARD|phgb|DQ212986|2258-2966|ARO:3002926|vanRG|Glycopeptides|VanG-type_regulator|VANRG	gi|762041216|gb|KF697366.1|34969-35677 gi|672937785|gb|KF686317.1|34969-35677 gi|674114364|gb|CP007573.1|760823-761531 gi|674107077|gb|CP007570.1|639079-639787 gi|77380191|gb|DQ212986.1|2259-2967 gi|33355827|gb|AY271782.1|17324-18032
CARD	CARD|phgb|AE015929|1128933-1129419|ARO:3002865|dfrC|Trimethoprim|Dihydrofolate_reductase|DFRC|RequiresSNPConfirmation	@phgb|AE015929|1128933-1129419|ARO:3002865|dfrC [Staphylococcus epidermidis ATCC 12228]
NCBI	CARD|phgb|AE015929|1128933-1129419|ARO:3002865|dfrC|Trimethoprim|Dihydrofolate_reductase|DFRC|RequiresSNPConfirmation	gi|760489133|gb|CP010942.1|982795-983281 gi|672710284|emb|HG813242.1|1146904-1147390 gi|886708|emb|Z48233.1|822-336 gi|57636010|gb|CP000029.1|1016993-1017479 gi|27316888|gb|AE015929.1|1128934-1129420
CARD	CARD|phgb|JF802084|5019-6114|ARO:3002940|vanSN|Glycopeptides|VanN-type_regulator|VANSN	@phgb|JF802084|5019-6114|ARO:3002940|vanSN [Enterococcus faecium]
NCBI	CARD|phgb|JF802084|5019-6114|ARO:3002940|vanSN|Glycopeptides|VanN-type_regulator|VANSN	gi|507722025|gb|JF802084.2|5020-6115
ARG-ANNOT	gi|157779404|gb|EU019535.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-80:HQ637467:1233-2057:825
CARD	gi|157779404|gb|EU019535.1|betalactams|Class_D_betalactamases|OXA	@phgb|EU019535|0-825|ARO:3001634|OXA-80 [Acinetobacter baumannii]
Lahey	gi|157779404|gb|EU019535.1|betalactams|Class_D_betalactamases|OXA	ABV71247.1 EU019535.1:1-825
NCBI	gi|157779404|gb|EU019535.1|betalactams|Class_D_betalactamases|OXA	gi|337263169|gb|HQ637467.1|1233-2057 gi|157779404|gb|EU019535.1|1-825
Resfinder	gi|157779404|gb|EU019535.1|betalactams|Class_D_betalactamases|OXA	blaOXA-80_1_EU019535
ARG-ANNOT	Bla|SHV-40|AF535128|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-40:AF535128:1-861:861
CARD	Bla|SHV-40|AF535128|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF535128|0-861|ARO:3001098|SHV-40 [Klebsiella pneumoniae]
Lahey	Bla|SHV-40|AF535128|1-861|861|betalactams|Class_A_betalactamases|SHV	AAN04882.1 AF535128.1:1-861
NCBI	Bla|SHV-40|AF535128|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|22725668|gb|AF535128.1|1-861
Resfinder	Bla|SHV-40|AF535128|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-40_1_AF535128
NCBI	Met|nimI_1_FJ940884|Metronidazole|nim_nitroimidazole_reductase|NIMI	gi|238069260|gb|FJ940884.1|1-457
Resfinder	Met|nimI_1_FJ940884|Metronidazole|nim_nitroimidazole_reductase|NIMI	nimI_1_FJ940884
ARG-ANNOT	Bla|AmpH|CP003785|4208384-4209544|1161|betalactams|Penicillin_binding_protein|AMPH	(Bla)AmpH:CP003785:4208384-4209544:1161
NCBI	Bla|AmpH|CP003785|4208384-4209544|1161|betalactams|Penicillin_binding_protein|AMPH	gi|979528538|gb|CP014010.1|1148141-1146981 gi|402539130|gb|CP003785.1|4208384-4209544 gi|57158257|dbj|AP006725.1|1143892-1142732
ARG-ANNOT	AGly|AphVIII|AF182845|1-804|804|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)AphVIII:AF182845:1-804:804
NCBI	AGly|AphVIII|AF182845|1-804|804|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|10242465|gb|AF182845.2|AF182845|1-804 gi|56694235|gb|AY704192.1|182-1
Resfinder	AGly|AphVIII|AF182845|1-804|804|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-VIII_1_AF182845
CARD	CARD|phgb|U00096|3660413-3663527|ARO:3000796|mdtF|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTC	@phgb|U00096|3660413-3663527|ARO:3000796|mdtF [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|3660413-3663527|ARO:3000796|mdtF|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTC	gi|985000614|gb|CP014225.1|1857614-1860728 gi|958627747|gb|CP013253.1|4342323-4339209 gi|939732440|gb|CP011343.2|3637380-3640494 gi|939731527|gb|CP011342.2|3637828-3640942 gi|937526251|gb|CP012870.1|981241-978127 gi|937521852|gb|CP012869.1|981241-978127 gi|937517453|gb|CP012868.1|981241-978127 gi|932857508|emb|LN877770.1|4483916-4487030 gi|923416119|gb|CP011113.1|3617141-3620255 gi|899729770|gb|CP012127.1|3634860-3637974
CARD	CARD|phgb|AJ401618|1971-3144|ARO:3002514|OCH-1|betalactams|Class_C_betalactamases|OCH	@phgb|AJ401618|1971-3144|ARO:3002514|OCH-1 [Ochrobactrum anthropi]
NCBI	CARD|phgb|AJ401618|1971-3144|ARO:3002514|OCH-1|betalactams|Class_C_betalactamases|OCH	gi|674008039|gb|CP008820.1|2126283-2125110 gi|9909829|emb|AJ401618.1|1972-3145 gi|402496289|gb|JX009239.1|437-408
NCBI	Sul|NC_009641.5330254|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|675300911|gb|CP007499.1|570413-571216 gi|150373012|dbj|AP009351.1|541867-542670
ARG-ANNOT	Bla|MOX-5|GQ152600|1-1152|1152|betalactams|Class_C_betalactamases|MOX	(Bla)MOX-5:GQ152600:1-1152:1152
CARD	Bla|MOX-5|GQ152600|1-1152|1152|betalactams|Class_C_betalactamases|MOX	@phgb|GQ152600|0-1152|ARO:3002188|MOX-5 [Aeromonas caviae]
Lahey	Bla|MOX-5|GQ152600|1-1152|1152|betalactams|Class_C_betalactamases|MOX	ACS44783.1 GQ152600.1:1-1152
NCBI	Bla|MOX-5|GQ152600|1-1152|1152|betalactams|Class_C_betalactamases|MOX	gi|240129545|gb|GQ152600.1|1-1152
Resfinder	Bla|MOX-5|GQ152600|1-1152|1152|betalactams|Class_C_betalactamases|MOX	blaMOX-5_1_GQ152600
CARD	gi|485185801|gb|KC783461.1|betalactams|Class_A_betalactamases|TEM	@phgb|KC783461|0-861|ARO:3001383|TEM-206 [Escherichia coli]
Lahey	gi|485185801|gb|KC783461.1|betalactams|Class_A_betalactamases|TEM	AGK82336.1 KC783461.1:1-861
NCBI	gi|485185801|gb|KC783461.1|betalactams|Class_A_betalactamases|TEM	gi|485185801|gb|KC783461.1|1-861
Resfinder	gi|485185801|gb|KC783461.1|betalactams|Class_A_betalactamases|TEM	blaTEM-206_1_KC783461
CARD	Bla|OXA-45_1_AJ519683|betalactams|Class_D_betalactamases|OXA	@phgb|AJ519683|281-1076|ARO:3001794|OXA-45 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-45_1_AJ519683|betalactams|Class_D_betalactamases|OXA	CAD58780.1 AJ519683.1:282-1076
NCBI	Bla|OXA-45_1_AJ519683|betalactams|Class_D_betalactamases|OXA	gi|695209780|ref|NG_035881.1|282-1076
Resfinder	Bla|OXA-45_1_AJ519683|betalactams|Class_D_betalactamases|OXA	blaOXA-45_1_AJ519683
NCBI	gi|403309640|gb|JQ002629.1|betalactams|Class_B_betalactamases|IMP	gi|403309640|gb|JQ002629.1|1-1495 gi|226426103|gb|EU855788.1|275470-275370 gi|226426103|gb|EU855788.1|139851-139925 gi|226426103|gb|EU855788.1|139920-139967 gi|226426103|gb|EU855788.1|269337-269290 gi|226425792|gb|EU855787.1|253232-253332 gi|226425792|gb|EU855787.1|139851-139925 gi|226425792|gb|EU855787.1|139920-139967 gi|226425792|gb|EU855787.1|259365-259412 gi|365269063|gb|JN624388.2|3938-3985 gi|239702135|emb|FN397627.1|1662-1708 gi|209943874|gb|FJ267650.1|954-991
Lahey	Bla|KF986256.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30275.1 KF986256.1:865-41
NCBI	Bla|KF986256.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389147|gb|KF986256.1|865-41
CARD	CARD|phgb|EF540343|1463-3230|ARO:3000217|blaR1|betalactams|Penicillin_binding_protein_regulator|BLAR	@phgb|EF540343|1463-3230|ARO:3000217|blaR1 [Bacillus clausii]
NCBI	CARD|phgb|EF540343|1463-3230|ARO:3000217|blaR1|betalactams|Penicillin_binding_protein_regulator|BLAR	gi|155793482|gb|EF540343.1|1464-3231
NCBI	gi|253684194|gb|GQ242167.1|betalactams|Class_B_betalactamases|VIM	gi|253684194|gb|GQ242167.1|1-803
ARG-ANNOT	gi|157783586|gb|EU155018.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-101:EU155018:1-861:861
CARD	gi|157783586|gb|EU155018.1|betalactams|Class_A_betalactamases|SHV	@phgb|EU155018|0-861|ARO:3001150|SHV-101 [Klebsiella pneumoniae]
Lahey	gi|157783586|gb|EU155018.1|betalactams|Class_A_betalactamases|SHV	ABV72593.1 EU155018.1:1-861
NCBI	gi|157783586|gb|EU155018.1|betalactams|Class_A_betalactamases|SHV	gi|157783586|gb|EU155018.1|1-861
Resfinder	gi|157783586|gb|EU155018.1|betalactams|Class_A_betalactamases|SHV	blaSHV-101_1_EU155018
CARD	CARD|phgb|NC_007907|4204949-4206077|ARO:3003727|VanKI|Glycopeptides|VanI-type_accessory_protein|VANKI	@phgb|NC_007907|4204949-4206077|ARO:3003727|VanKI [Desulfitobacterium hafniense]
NCBI	CARD|phgb|NC_007907|4204949-4206077|ARO:3003727|VanKI|Glycopeptides|VanI-type_accessory_protein|VANKI	gi|698315210|emb|LK996017.1|4146062-4147189 gi|89332194|dbj|AP008230.1|4204950-4206077
NCBI	AGly|AF205943.1|gene15|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|950648732|gb|KT959107.1|9026-9817 gi|950648725|gb|KT959106.1|9026-9817 gi|950648717|gb|KT959105.1|9026-9817 gi|950648709|gb|KT959104.1|9026-9817 gi|950648702|gb|KT959103.1|9026-9817 gi|409729032|gb|JX141473.1|107723-108514 gi|695226212|ref|NG_041455.1|8795-9586 gi|260677483|gb|GQ388247.1|11237-12028 gi|169147133|emb|CU459141.1|3656860-3656069 gi|145321079|gb|EF522838.1|4137-4928
CARD	CARD|phgb|DQ223685|0-876|ARO:3001914|CTX-M-52|betalactams|Class_A_betalactamases|CTX	@phgb|DQ223685|0-876|ARO:3001914|CTX-M-52 [Klebsiella pneumoniae]
NCBI	CARD|phgb|DQ223685|0-876|ARO:3001914|CTX-M-52|betalactams|Class_A_betalactamases|CTX	gi|78057321|gb|DQ223685.1|1-877 gi|281335921|gb|GU125667.1|1-876
CARD	Bla|CTX-M-37_2_FN813246|betalactams|Class_A_betalactamases|CTX	@phgb|AY649755|17-893|ARO:3001899|CTX-M-37 [Enterobacter cloacae]
Lahey	Bla|CTX-M-37_2_FN813246|betalactams|Class_A_betalactamases|CTX	AAT70415.1 AY649755.2:1641-2516
NCBI	Bla|CTX-M-37_2_FN813246|betalactams|Class_A_betalactamases|CTX	gi|532235082|gb|AY649755.2|1641-2516 gi|309951209|emb|FN813246.1|4408-5283
Resfinder	Bla|CTX-M-37_2_FN813246|betalactams|Class_A_betalactamases|CTX	blaCTX-M-37_2_FN813246
NCBI	Rif|ARR-6_2_FM897214|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|222353662|emb|FM897214.1|4193-4645
Resfinder	Rif|ARR-6_2_FM897214|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	ARR-6_2_FM897214
CARD	CARD|phgb|EU999036|688-1390|ARO:3002934|vanSD|Glycopeptides|VanD-type_regulator|VANSD	@phgb|EU999036|688-1390|ARO:3002934|vanSD [Enterococcus faecium]
NCBI	CARD|phgb|EU999036|688-1390|ARO:3002934|vanSD|Glycopeptides|VanD-type_regulator|VANSD	gi|222159809|gb|EU999036.1|689-1390
ARG-ANNOT	gi|15858853|gb|AY029068.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-16:AY029068:1-876:876
CARD	gi|15858853|gb|AY029068.1|betalactams|Class_A_betalactamases|CTX	@phgb|AY029068|0-876|ARO:3001879|CTX-M-16 [Escherichia coli]
Lahey	gi|15858853|gb|AY029068.1|betalactams|Class_A_betalactamases|CTX	AAK32961.1 AY029068.1:1-876
NCBI	gi|15858853|gb|AY029068.1|betalactams|Class_A_betalactamases|CTX	gi|15858853|gb|AY029068.1|1-876
Resfinder	gi|15858853|gb|AY029068.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-16_1_AY029068
ARG-ANNOT	Rif|Arr4|EF660562|1672-2124|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	(Rif)Arr4:EF660562:1672-2124:453
CARD	Rif|Arr4|EF660562|1672-2124|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	@phgb|EF660562|1671-2124|ARO:3002849|arr-4 [Pseudomonas aeruginosa]
NCBI	Rif|Arr4|EF660562|1672-2124|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|157272127|gb|EF660562.1|1672-2124
Resfinder	Rif|Arr4|EF660562|1672-2124|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	ARR-4_1_EF660562
CARD	CARD|phgb|KM659858|401-1154|ARO:3003194|GIM-2|betalactams|Class_B_betalactamases|GIM	@phgb|KM659858|401-1154|ARO:3003194|GIM-2 [Enterobacter cloacae]
NCBI	CARD|phgb|KM659858|401-1154|ARO:3003194|GIM-2|betalactams|Class_B_betalactamases|GIM	gi|724471669|gb|KM659858.1|402-1155
ARG-ANNOT	Tmt|DfrA6|Z86002|336-809|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA6:Z86002:336-809:474
NCBI	Tmt|DfrA6|Z86002|336-809|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|635661971|gb|KJ569108.1|1595-2068 gi|1845167|emb|Z86002.1|336-809
Resfinder	Tmt|DfrA6|Z86002|336-809|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA6_1_Z86002
NCBI	Sul|sul2_3_HQ340942|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|981191958|emb|LN999997.1|2508549-2509364 gi|944397480|gb|CP013024.1|49876-50691 gi|926485056|gb|CP012636.1|87456-88271 gi|828386350|gb|CP006635.1|15348-14533 gi|825089827|gb|KP899805.1|14053-14868 gi|825089575|gb|KP899804.1|5333-6148 gi|821329258|gb|CP011418.1|36260-37075 gi|817373828|gb|KP398867.1|146039-145224 gi|816208797|gb|CP011331.1|4661268-4660453 gi|815975449|gb|CP011314.1|59491-60306
Resfinder	Sul|sul2_3_HQ340942|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_3_HQ840942
NCBI	gi|1524020|emb|X92506.1|betalactams|Class_A_betalactamases|CTX	gi|933686806|gb|KT779550.1|2516-1567 gi|848613079|gb|KR494248.1|85099-84150 gi|822874760|gb|KM052220.1|32235-33184 gi|756791690|gb|KM377240.1|86672-87621 gi|756791559|gb|KM377239.1|98870-99819 gi|756791433|gb|KM377238.1|92164-91215 gi|745795237|gb|CP007651.1|102652-101703 gi|700369833|gb|KJ563250.1|68054-67105 gi|695941297|gb|CP009580.1|9652-10601 gi|695941297|gb|CP009580.1|117303-116354 gi|681884821|gb|KM094197.1|81-1030
NCBI	Mdr|NC_002516.2.878882|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXY	gi|926451317|emb|LN871187.1|3304533-3307670 gi|553895034|gb|CP006832.1|2211301-2208164 gi|553886202|gb|CP006831.1|2211301-2208164 gi|543879514|gb|CP006705.1|2211189-2208052 gi|110227054|gb|AE004091.2|2211306-2208169 gi|6502949|gb|AF147719.1|AF147719|2226-5363
NCBI	503|FJ848785.1|FJ848785|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|975048878|gb|CP013962.1|318833-319693 gi|971493847|gb|CP010351.1|285748-286608 gi|943457735|gb|KT818627.1|82130-82990 gi|943457735|gb|KT818627.1|143721-144581 gi|928083869|gb|CP012682.1|23040-22180 gi|926473560|gb|CP012626.1|106956-106096 gi|909636483|emb|LN850163.1|64828-65688 gi|834762928|gb|CP006642.1|54938-54078 gi|825089575|gb|KP899804.1|15903-15043 gi|821436432|gb|EU418931.1|7932-8792 gi|808175404|emb|LN833432.1|39539-40399
NCBI	457|AF310956.2|AF310956|Glycopeptides|VanB-type_resistance_protein|VANB	gi|11878534|gb|AF310956.2|AF310956|5259-6287 gi|1763666|gb|U81452.1|EFU81452|150-1178
ARG-ANNOT	Tmt|DfrA13|Z50802|718-1215|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA13:Z50802:718-1215:498
CARD	Tmt|DfrA13|Z50802|718-1215|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|Z50802|717-1215|ARO:3003012|dfrA13 [Escherichia coli]
NCBI	Tmt|DfrA13|Z50802|718-1215|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|5565935|emb|Z50802.3|718-1215
Resfinder	Tmt|DfrA13|Z50802|718-1215|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA13_1_Z50802
NCBI	Flq|CP001138.1|gene2385|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|807109228|gb|CP011259.1|4159751-4157115 gi|563346448|gb|CP006876.1|2327360-2324724 gi|197211055|gb|CP001138.1|2327829-2325193
CARD	Bla|CMY-14_2_AJ555825|betalactams|Class_C_betalactamases|CMY	@phgb|AJ555825|0-1146|ARO:3002025|CMY-14 [Proteus mirabilis]
Lahey	Bla|CMY-14_2_AJ555825|betalactams|Class_C_betalactamases|CMY	CAD88479.1 AJ555825.2:1-1146
NCBI	Bla|CMY-14_2_AJ555825|betalactams|Class_C_betalactamases|CMY	gi|257152902|emb|AJ555825.2|1-1146
Resfinder	Bla|CMY-14_2_AJ555825|betalactams|Class_C_betalactamases|CMY	blaCMY-14_2_AJ555825
CARD	CARD|pvgb|NC_011595|2919562-2920267|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|NC_011595|2919562-2920267|ARO:3001312|elfamycin resistant EF-Tu [Acinetobacter baumannii AB307-0294]
NCBI	CARD|pvgb|NC_011595|2919562-2920267|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|213985689|gb|CP001172.1|2919563-2920268
ARG-ANNOT	Bla|CTX-M-94|HM167760|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-94:HM167760:1-876:876
CARD	Bla|CTX-M-94|HM167760|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|HM167760|0-876|ARO:3001954|CTX-M-94 [Escherichia coli]
Lahey	Bla|CTX-M-94|HM167760|1-876|876|betalactams|Class_A_betalactamases|CTX	ADK11041.1 HM167760.1:1-876
NCBI	Bla|CTX-M-94|HM167760|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|300390457|gb|HM167760.1|1-876
Resfinder	Bla|CTX-M-94|HM167760|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-94_1_HM167760
NCBI	Sul|sul1_17_AM746675|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|154757953|emb|AM746675.2|2311-3150 gi|974751547|gb|KU130294.1|233473-234001 gi|982189197|gb|CP013993.1|5430539-5431065
Resfinder	Sul|sul1_17_AM746675|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_17_AM746675
ARG-ANNOT	Bla|CEPA-29|U05884|556-1458|903|betalactams|Class_A_betalactamases|CEPA	(Bla)CEPA-29:U05884:556-1458:903
NCBI	Bla|CEPA-29|U05884|556-1458|903|betalactams|Class_A_betalactamases|CEPA	gi|458302|gb|U05884.1|BFU05884|556-1458
Resfinder	Bla|CEPA-29|U05884|556-1458|903|betalactams|Class_A_betalactamases|CEPA	cepA-29_1_U05884
CARD	CARD|phgb|NC_006582|1162417-1163470|ARO:3002816|clbC|Phenicol|Phenicol_23S_rRNA_methyltransferases|CLBC	@phgb|NC_006582|1162417-1163470|ARO:3002816|clbC [Bacillus clausii KSM-K16]
NCBI	CARD|phgb|NC_006582|1162417-1163470|ARO:3002816|clbC|Phenicol|Phenicol_23S_rRNA_methyltransferases|CLBC	gi|922061703|gb|CP012475.1|885760-884707 gi|56908016|dbj|AP006627.1|1162418-1163471
ARG-ANNOT	Bla|CMY-39|AB372224|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-39:AB372224:1-1146:1146
CARD	Bla|CMY-39|AB372224|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AB372224|0-1146|ARO:3002050|CMY-39 [Citrobacter freundii]
Lahey	Bla|CMY-39|AB372224|1-1146|1146|betalactams|Class_C_betalactamases|CMY	BAF95726.1 AB372224.1:1-1146
NCBI	Bla|CMY-39|AB372224|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|163263360|dbj|AB372224.1|1-1146
ARG-ANNOT	gi|256860802|gb|GQ402541.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-49:GQ402541:1-1146:1146
CARD	gi|256860802|gb|GQ402541.1|betalactams|Class_C_betalactamases|CMY	@phgb|GQ402541|0-1146|ARO:3002060|CMY-49 [Citrobacter freundii]
Lahey	gi|256860802|gb|GQ402541.1|betalactams|Class_C_betalactamases|CMY	ACV32310.1 GQ402541.1:1-1146
NCBI	gi|256860802|gb|GQ402541.1|betalactams|Class_C_betalactamases|CMY	gi|927043620|gb|CP012554.1|2295997-2297142 gi|256860802|gb|GQ402541.1|1-1146
Resfinder	gi|256860802|gb|GQ402541.1|betalactams|Class_C_betalactamases|CMY	blaCMY-49_1_GQ402541
CARD	Bla|OXA-253_1_KC479324|betalactams|Class_D_betalactamases|OXA	@phgb|KC479324|575-1403|ARO:3001689|OXA-253 [Acinetobacter baumannii]
Lahey	Bla|OXA-253_1_KC479324|betalactams|Class_D_betalactamases|OXA	AGK07368.1 KC479324.2:576-1403
NCBI	Bla|OXA-253_1_KC479324|betalactams|Class_D_betalactamases|OXA	gi|695228134|ref|NG_041724.1|1217-2044 gi|567943239|gb|KC479324.2|576-1403
Resfinder	Bla|OXA-253_1_KC479324|betalactams|Class_D_betalactamases|OXA	blaOXA-253_1_KC479324
ARG-ANNOT	Bla|OXA-5|X58272|80-883|804|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-5:X58272:80-883:804
CARD	Bla|OXA-5|X58272|80-883|804|betalactams|Class_D_betalactamases|OXA	@phgb|X58272|79-883|ARO:3001400|OXA-5 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-5|X58272|80-883|804|betalactams|Class_D_betalactamases|OXA	CAA41211.1 X58272.1:80-883
NCBI	Bla|OXA-5|X58272|80-883|804|betalactams|Class_D_betalactamases|OXA	gi|19919175|gb|AF347074.1|1661-2464 gi|695196612|ref|NG_034473.1|80-883
Resfinder	Bla|OXA-5|X58272|80-883|804|betalactams|Class_D_betalactamases|OXA	blaOXA-5_1_X58272
CARD	CARD|phgb|NC_009641|1461588-1462248|ARO:3000838|arlR|Multi-drug_resistance|MDR_regulator|ARLS	@phgb|NC_009641|1461588-1462248|ARO:3000838|arlR [Staphylococcus aureus subsp. aureus str. Newman]
NCBI	CARD|phgb|NC_009641|1461588-1462248|ARO:3000838|arlR|Multi-drug_resistance|MDR_regulator|ARLS	gi|984671414|emb|LT009690.1|1468482-1469142 gi|974161314|gb|CP012018.1|1532777-1533437 gi|974158397|gb|CP012015.1|1533513-1534173 gi|974155539|gb|CP012013.1|1534426-1535086 gi|974152716|gb|CP012012.1|1526307-1526967 gi|974149849|gb|CP012011.1|1582261-1582921 gi|941146344|gb|CP007676.1|1425657-1426317 gi|941142962|gb|CP007672.1|1424046-1424706 gi|941139768|gb|CP007657.1|1437758-1438418 gi|930584899|dbj|AP014942.1|1415538-1416198
ARG-ANNOT	Bla|OXA-217|JN603240|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-217:JN603240:1-825:825
CARD	Bla|OXA-217|JN603240|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|JN603240|0-825|ARO:3001489|OXA-217 [Acinetobacter baumannii]
Lahey	Bla|OXA-217|JN603240|1-825|825|betalactams|Class_D_betalactamases|OXA	AEO44980.1 JN603240.1:1-825
NCBI	Bla|OXA-217|JN603240|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|346655376|gb|JN603240.1|1-825
Resfinder	Bla|OXA-217|JN603240|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-217_1_JN603240
ARG-ANNOT	Tet|TetT|L42544|478-2433|1956|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETT	(Tet)TetT:L42544:478-2433:1956
CARD	Tet|TetT|L42544|478-2433|1956|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETT	@phgb|L42544|0-1956|ARO:3000193|tetT [Streptococcus pyogenes]
NCBI	Tet|TetT|L42544|478-2433|1956|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETT	gi|6016009|gb|L42544.1|478-2433 gi|239829480|gb|FJ950716.1|1-114
Resfinder	Tet|TetT|L42544|478-2433|1956|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETT	tet(T)_1_L42544
CARD	CARD|phgb|NC_007779|2166412-2167135|ARO:3000828|baeR|Multi-drug_resistance|MDR_regulator|BAER	@phgb|NC_007779|2166412-2167135|ARO:3000828|baeR [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|NC_007779|2166412-2167135|ARO:3000828|baeR|Multi-drug_resistance|MDR_regulator|BAER	gi|985000614|gb|CP014225.1|361475-362198 gi|958627747|gb|CP013253.1|1251996-1251273 gi|958612453|gb|CP013048.1|2093285-2092562 gi|939732440|gb|CP011343.2|2144433-2145156 gi|939731527|gb|CP011342.2|2145129-2145852 gi|937526251|gb|CP012870.1|2477378-2476655 gi|937521852|gb|CP012869.1|2477378-2476655 gi|937517453|gb|CP012868.1|2477378-2476655 gi|932857508|emb|LN877770.1|2528310-2529033 gi|923416119|gb|CP011113.1|2127138-2127861
NCBI	Mdr|CP000034.1|gene3834|Multi-drug_resistance|MDR_regulator|CPXAR	gi|558570689|gb|CP006736.1|3516198-3516896 gi|81239530|gb|CP000034.1|3566576-3567274
ARG-ANNOT	Bla|VIM-11|EF116550|128-928|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-11:EF116550:128-928:801
CARD	Bla|VIM-11|EF116550|128-928|801|betalactams|Class_B_betalactamases|VIM	@phgb|AY605049|127-928|ARO:3002281|VIM-11 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-11|EF116550|128-928|801|betalactams|Class_B_betalactamases|VIM	AAT36613.1 AY605049.2:128-928
NCBI	Bla|VIM-11|EF116550|128-928|801|betalactams|Class_B_betalactamases|VIM	gi|119220840|gb|EF116550.1|128-928 gi|54887317|gb|AY605049.2|128-928 gi|66734335|gb|DQ022682.1|1-801 gi|51571647|emb|AJ628983.2|1081-1881
Resfinder	Bla|VIM-11|EF116550|128-928|801|betalactams|Class_B_betalactamases|VIM	blaVIM-11_1_AY605049
NCBI	Elf|NC_002516.2.881697|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|730327-731520 gi|553895034|gb|CP006832.1|4785504-4784311 gi|553886202|gb|CP006831.1|4786589-4785396 gi|543879514|gb|CP006705.1|4565092-4563899 gi|110227054|gb|AE004091.2|4785509-4784316
ARG-ANNOT	AGly|Aac6-32|EF614235|2247-2801|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-32:EF614235:2247-2801:555
CARD	AGly|Aac6-32|EF614235|2247-2801|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|EF614235|2246-2801|ARO:3002586|AAC(6')-32 [Pseudomonas aeruginosa]
NCBI	AGly|Aac6-32|EF614235|2247-2801|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|695212529|ref|NG_036430.1|2247-2801
Resfinder	AGly|Aac6-32|EF614235|2247-2801|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-32_1_EF614235
ARG-ANNOT	CARD|phgb|EF452177|0-495|ARO:3002838|lnuD|MLS|Lincosamide_nucleotidyltransferases|LNUC	(MLS)LnuD:EF452177:19-513:495
CARD	CARD|phgb|EF452177|0-495|ARO:3002838|lnuD|MLS|Lincosamide_nucleotidyltransferases|LNUC	@phgb|EF452177|0-495|ARO:3002838|lnuD [Streptococcus uberis]
NCBI	CARD|phgb|EF452177|0-495|ARO:3002838|lnuD|MLS|Lincosamide_nucleotidyltransferases|LNUC	gi|148832230|gb|EF452177.1|19-513
Resfinder	CARD|phgb|EF452177|0-495|ARO:3002838|lnuD|MLS|Lincosamide_nucleotidyltransferases|LNUC	lnu(D)_1_EF452177
CARD	CARD|phgb|HQ185697|1267-2413|ARO:3002072|CMY-58|betalactams|Class_C_betalactamases|CMY	@phgb|HQ185697|1267-2413|ARO:3002072|CMY-58 [Escherichia coli]
NCBI	CARD|phgb|HQ185697|1267-2413|ARO:3002072|CMY-58|betalactams|Class_C_betalactamases|CMY	gi|695224888|ref|NG_041181.1|1268-2414
ARG-ANNOT	Bla|IND-9|GU186045|35-754|720|betalactams|Class_B_betalactamases|IND	(Bla)IND-9:GU186045:35-754:720
CARD	Bla|IND-9|GU186045|35-754|720|betalactams|Class_B_betalactamases|IND	@phgb|GU186045|34-754|ARO:3002265|IND-9 [Chryseobacterium indologenes]
Lahey	Bla|IND-9|GU186045|35-754|720|betalactams|Class_B_betalactamases|IND	ACZ65153.1 GU186045.1:35-754
NCBI	Bla|IND-9|GU186045|35-754|720|betalactams|Class_B_betalactamases|IND	gi|270266461|gb|GU186045.1|35-754
Resfinder	Bla|IND-9|GU186045|35-754|720|betalactams|Class_B_betalactamases|IND	blaIND-9_1_GU186045
CARD	Bla|SHV-164_1_HE981194|betalactams|Class_A_betalactamases|SHV	@phgb|HE981194|0-861|ARO:3001347|SHV-164 [Klebsiella pneumoniae]
Lahey	Bla|SHV-164_1_HE981194|betalactams|Class_A_betalactamases|SHV	CCK86744.1 HE981194.1:1-861
NCBI	Bla|SHV-164_1_HE981194|betalactams|Class_A_betalactamases|SHV	gi|527170165|emb|HE981194.1|1-861
Resfinder	Bla|SHV-164_1_HE981194|betalactams|Class_A_betalactamases|SHV	blaSHV-164_1_HE981194
ARG-ANNOT	gi|240129547|gb|GQ152601.1|betalactams|Class_C_betalactamases|MOX	(Bla)MOX-6:GQ152601:1-1152:1152
CARD	gi|240129547|gb|GQ152601.1|betalactams|Class_C_betalactamases|MOX	@phgb|GQ152601|0-1152|ARO:3002185|MOX-6 [Aeromonas caviae]
Lahey	gi|240129547|gb|GQ152601.1|betalactams|Class_C_betalactamases|MOX	ACS44784.1 GQ152601.1:1-1152
NCBI	gi|240129547|gb|GQ152601.1|betalactams|Class_C_betalactamases|MOX	gi|240129547|gb|GQ152601.1|1-1152
Resfinder	gi|240129547|gb|GQ152601.1|betalactams|Class_C_betalactamases|MOX	blaMOX-6_1_GQ152601
NCBI	Tet|tetX_3_AB097942|Tetracyclines|Tetracycline_inactivation_enzymes|TETX	gi|31980335|dbj|AB097942.1|1-1137
Resfinder	Tet|tetX_3_AB097942|Tetracyclines|Tetracycline_inactivation_enzymes|TETX	tet(X)_3_AB097942
ARG-ANNOT	gi|169883501|gb|EU496815.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-32:EU496815:1-1146:1146
CARD	gi|169883501|gb|EU496815.1|betalactams|Class_C_betalactamases|CMY	@phgb|EU496815|0-1146|ARO:3002043|CMY-32 [Escherichia coli]
Lahey	gi|169883501|gb|EU496815.1|betalactams|Class_C_betalactamases|CMY	ACA97846.1 EU496815.1:1-1146
NCBI	gi|169883501|gb|EU496815.1|betalactams|Class_C_betalactamases|CMY	gi|169883501|gb|EU496815.1|1-1146
Resfinder	gi|169883501|gb|EU496815.1|betalactams|Class_C_betalactamases|CMY	blaCMY-32_1_EU496815
NCBI	gi|53854917|gb|AY743435.1|betalactams|Class_C_betalactamases|MIR	gi|53854917|gb|AY743435.1|1-1160 gi|666667509|gb|KJ949090.1|1-1146
ARG-ANNOT	Bla|B-13|EF595959|1-750|750|betalactams|Class_B_betalactamases|BLAB	(Bla)B-13:EF595959:1-750:750
NCBI	Bla|B-13|EF595959|1-750|750|betalactams|Class_B_betalactamases|BLAB	gi|148533500|gb|EF595959.1|1-750
Resfinder	Bla|B-13|EF595959|1-750|750|betalactams|Class_B_betalactamases|BLAB	blaB-13_1_EF595959
CARD	CARD|phgb|AM180066|788-1688|ARO:3000319|mphC|MLS|Macrolide_phosphotransferases|MPHC	@phgb|AM180066|788-1688|ARO:3000319|mphC [Staphylococcus equorum]
NCBI	CARD|phgb|AM180066|788-1688|ARO:3000319|mphC|MLS|Macrolide_phosphotransferases|MPHC	gi|106880083|emb|AM180066.1|789-1688
Lahey	Bla|KF986263.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30282.1 KF986263.1:915-91
NCBI	Bla|KF986263.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389161|gb|KF986263.1|915-91
ARG-ANNOT	Bla|TEM-195|JN935137|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-195:JN935137:1-861:861
CARD	Bla|TEM-195|JN935137|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|JN935137|0-861|ARO:3001055|TEM-195 [Acinetobacter baumannii]
Lahey	Bla|TEM-195|JN935137|1-861|861|betalactams|Class_A_betalactamases|TEM	AFC75525.1 JN935137.1:1-861
NCBI	Bla|TEM-195|JN935137|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|378939970|gb|JN935137.1|1-861
Resfinder	Bla|TEM-195|JN935137|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-195_1_JN935137
CARD	CARD|phgb|M19269|459-1419|ARO:3001304|ErmS|MLS|23S_rRNA_methyltransferases|ERMS	@phgb|M19269|459-1419|ARO:3001304|ErmS [Streptomyces fradiae]
NCBI	CARD|phgb|M19269|459-1419|ARO:3001304|ErmS|MLS|23S_rRNA_methyltransferases|ERMS	gi|153251|gb|M19269.1|STMERMSF|460-1420 gi|772242489|gb|CP011043.1|1842709-1842680
Lahey	Bla|IMP-25_1_HM175876|betalactams|Class_B_betalactamases|IMP	ADI49230.1 HM106457.1:643-1380
NCBI	Bla|IMP-25_1_HM175876|betalactams|Class_B_betalactamases|IMP	gi|300391789|gb|HM175876.1|712-1449 gi|297615927|gb|HM106457.1|643-1380 gi|295002612|gb|GU944726.1|639-1376
Resfinder	Bla|IMP-25_1_HM175876|betalactams|Class_B_betalactamases|IMP	blaIMP-25_1_HM175876
NCBI	697|unknown_id|unknown_name|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|45758644|gb|AY570506.1|1820-1194
CARD	Flq|QnrB52_1_EF488762|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EF488762|0-645|ARO:3002715|QnrB2 [Proteus mirabilis]
NCBI	Flq|QnrB52_1_EF488762|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|544586558|gb|KF193607.1|3705-3061 gi|284019456|gb|GU295958.1|3705-3061 gi|284019453|gb|GU295957.1|3705-3061 gi|144228114|gb|EF488762.1|1-645
Resfinder	Flq|QnrB52_1_EF488762|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB52_1_EF488762
ARG-ANNOT	Bla|IND-3|AF219133|1-720|720|betalactams|Class_B_betalactamases|IND	(Bla)IND-3:AF219133:1-720:720
CARD	Bla|IND-3|AF219133|1-720|720|betalactams|Class_B_betalactamases|IND	@phgb|AF219131|0-720|ARO:3002259|IND-3 [Chryseobacterium indologenes]
Lahey	Bla|IND-3|AF219133|1-720|720|betalactams|Class_B_betalactamases|IND	AAG29761.2 AF219131.2:1-720
NCBI	Bla|IND-3|AF219133|1-720|720|betalactams|Class_B_betalactamases|IND	gi|11096454|gb|AF219133.2|AF219133|1-720 gi|11095179|gb|AF219132.1|1-720
Resfinder	Bla|IND-3|AF219133|1-720|720|betalactams|Class_B_betalactamases|IND	blaIND-3_1_AF219131
ARG-ANNOT	Bla|SHV-160|JX121127|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-160:JX121127:1-861:861
CARD	Bla|SHV-160|JX121127|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|JX121127|0-861|ARO:3001199|SHV-160 [Klebsiella pneumoniae]
Lahey	Bla|SHV-160|JX121127|1-861|861|betalactams|Class_A_betalactamases|SHV	AFQ23966.1 JX121127.1:1-861
NCBI	Bla|SHV-160|JX121127|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|401871178|gb|JX121127.1|1-861
Resfinder	Bla|SHV-160|JX121127|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-160_1_JX121127
CARD	CARD|pvgb|AE014075|3901532-3902762|ARO:3003438|Escherichia|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|AE014075|3901532-3902762|ARO:3003438|Escherichia coli EF-Tu mutants conferring resistance to GE2270A [Escherichia coli CFT073];@pvgb|AE014075|3901532-3902762|ARO:3003368|Escherichia coli EF-Tu mutants conferring resistance to kirromycin [Escherichia coli CFT073];@pvgb|AE014075|3901532-3902762|ARO:3003369|Escherichia coli EF-Tu mutants conferring resistance to Pulvomycin [Escherichia coli CFT073]
NCBI	CARD|pvgb|AE014075|3901532-3902762|ARO:3003438|Escherichia|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|674299053|gb|CP009072.1|1283365-1282136 gi|660510169|gb|CP007799.1|3830919-3832148 gi|355423321|gb|CP002212.1|3772591-3773820 gi|355418401|gb|CP002211.1|3772591-3773820 gi|307551844|gb|CP001671.1|3805919-3807148 gi|26111730|gb|AE014075.1|3901533-3902762
NCBI	Tet|tet40_2_FJ158002|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	gi|576941992|gb|KC790466.1|1971-3191 gi|204789639|gb|FJ158002.1|1889-3109 gi|204789615|gb|FJ157999.1|1889-3109 gi|379125718|gb|JQ280445.2|3221-3296
Resfinder	Tet|tet40_2_FJ158002|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	tet(40)_2_FJ158002
NCBI	gi|407731538|gb|JX440356.1|betalactams|Class_C_betalactamases|ACT	gi|407731538|gb|JX440356.1|653-1899
ARG-ANNOT	Flq|QnrB5|DQ303919|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB5:DQ303919:37-681:645
CARD	Flq|QnrB5|DQ303919|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|DQ303919|0-681|ARO:3002719|QnrB5 [Salmonella enterica subsp. enterica serovar Berta]
NCBI	Flq|QnrB5|DQ303919|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|83367093|gb|DQ303919.1|1-681
Resfinder	Flq|QnrB5|DQ303919|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB5_1_DQ303919
ARG-ANNOT	Bla|FONA-5|AJ251243|1054-1941|888|betalactams|Class_A_betalactamases|FONA	(Bla)FONA-5:AJ251243:1054-1941:888
NCBI	Bla|FONA-5|AJ251243|1054-1941|888|betalactams|Class_A_betalactamases|FONA	gi|6468747|emb|AJ251243.1|1054-1941
Resfinder	Bla|FONA-5|AJ251243|1054-1941|888|betalactams|Class_A_betalactamases|FONA	blaFONA-5_1_AJ251243
ARG-ANNOT	Flq|QnrB53|HQ704413|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB53:HQ704413:1-681:681
CARD	Flq|QnrB53|HQ704413|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HQ704413|0-681|ARO:3002761|QnrB46 [Klebsiella pneumoniae]
NCBI	Flq|QnrB53|HQ704413|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695225235|ref|NG_041244.1|1-681
Resfinder	Flq|QnrB53|HQ704413|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB53_1_HQ704413
CARD	Bla|KF526115.1|gene1|betalactams|Class_C_betalactamases|CMY	@phgb|KF526115|0-1146|ARO:3002114|CMY-102 [Escherichia coli]
Lahey	Bla|KF526115.1|gene1|betalactams|Class_C_betalactamases|CMY	AHA80103.1 KF526115.1:1-1146
NCBI	Bla|KF526115.1|gene1|betalactams|Class_C_betalactamases|CMY	gi|558605692|gb|KF526115.1|1-1146
ARG-ANNOT	Bla|CMY-64|HQ832678|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-64:HQ832678:1-1146:1146
CARD	Bla|CMY-64|HQ832678|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|HQ832678|0-1146|ARO:3002077|CMY-64 [Escherichia coli]
Lahey	Bla|CMY-64|HQ832678|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ADW84690.1 HQ832678.1:1-1146
NCBI	Bla|CMY-64|HQ832678|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|321440543|gb|HQ832678.1|1-1146
Resfinder	Bla|CMY-64|HQ832678|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-64_1_HQ832678
ARG-ANNOT	Bla|SHV-155|JX121122|1-858|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-155:JX121122:1-858:858
CARD	Bla|SHV-155|JX121122|1-858|858|betalactams|Class_A_betalactamases|SHV	@phgb|JX121122|0-858|ARO:3001194|SHV-155 [Klebsiella pneumoniae]
Lahey	Bla|SHV-155|JX121122|1-858|858|betalactams|Class_A_betalactamases|SHV	AFQ23961.1 JX121122.1:1-858
NCBI	Bla|SHV-155|JX121122|1-858|858|betalactams|Class_A_betalactamases|SHV	gi|401871168|gb|JX121122.1|1-858
Resfinder	Bla|SHV-155|JX121122|1-858|858|betalactams|Class_A_betalactamases|SHV	blaSHV-155_1_JX121122
NCBI	AGly|AF355189.1|gene2|1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3-PRIME	gi|18958399|gb|AF355189.1|1369-1890 gi|425862449|gb|JX566708.1|329-386 gi|317018024|gb|GU390404.1|273-330 gi|317018003|gb|GU390401.1|293-350 gi|429201046|gb|JX193301.1|3545-3601
CARD	Elf|NC_002516.2.880346|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@phgb|NC_002516|4707534-4710624|ARO:3000808|mexI [Pseudomonas aeruginosa PAO1]
NCBI	Elf|NC_002516.2.880346|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|954630252|gb|CP013245.1|1428447-1431536 gi|926451317|emb|LN871187.1|808301-805212 gi|660504631|gb|CP008749.1|4707535-4710624 gi|553895034|gb|CP006832.1|4707530-4710619 gi|553886202|gb|CP006831.1|4708615-4711704 gi|543879514|gb|CP006705.1|4487118-4490207 gi|110227054|gb|AE004091.2|4707535-4710624
CARD	CARD|phgb|AF015628|398-1286|ARO:3001308|VgbB|MLS|Streptogramin_B_ester_bond_cleavage|VGBB	@phgb|AF015628|398-1286|ARO:3001308|VgbB [Staphylococcus cohnii]
NCBI	CARD|phgb|AF015628|398-1286|ARO:3001308|VgbB|MLS|Streptogramin_B_ester_bond_cleavage|VGBB	gi|695198733|ref|NG_035070.1|399-1287
ARG-ANNOT	gi|393716496|gb|JX089628.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-240:JX089628:1-801:801
CARD	gi|393716496|gb|JX089628.1|betalactams|Class_D_betalactamases|OXA	@phgb|JX089628|0-801|ARO:3001499|OXA-240 [Pseudomonas aeruginosa]
Lahey	gi|393716496|gb|JX089628.1|betalactams|Class_D_betalactamases|OXA	AFN20670.1 JX089628.1:1-801
NCBI	gi|393716496|gb|JX089628.1|betalactams|Class_D_betalactamases|OXA	gi|393716496|gb|JX089628.1|1-801
Resfinder	gi|393716496|gb|JX089628.1|betalactams|Class_D_betalactamases|OXA	blaOXA-240_1_JX089628
ARG-ANNOT	Bla|CTX-M-44|D37830|91-966|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-44:D37830:91-966:876
CARD	Bla|CTX-M-44|D37830|91-966|876|betalactams|Class_A_betalactamases|CTX	@phgb|D37830|90-966|ARO:3001906|CTX-M-44 [Escherichia coli]
Lahey	Bla|CTX-M-44|D37830|91-966|876|betalactams|Class_A_betalactamases|CTX	BAA07082.1 D37830.1:91-966
NCBI	Bla|CTX-M-44|D37830|91-966|876|betalactams|Class_A_betalactamases|CTX	gi|668347656|dbj|AB976584.1|5111-5986 gi|668347654|dbj|AB976583.1|102-977 gi|668347649|dbj|AB976581.1|1249-2124 gi|1435024|dbj|D37830.1|ECOBELA|91-966
Resfinder	Bla|CTX-M-44|D37830|91-966|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-44_1_D37830
ARG-ANNOT	gi|312164949|gb|HQ336940.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-53:HQ336940:1-1146:1146
CARD	gi|312164949|gb|HQ336940.1|betalactams|Class_C_betalactamases|CMY	@phgb|HQ336940|0-1146|ARO:3002064|CMY-53 [Escherichia coli]
Lahey	gi|312164949|gb|HQ336940.1|betalactams|Class_C_betalactamases|CMY	ADQ38362.1 HQ336940.1:1-1146
NCBI	gi|312164949|gb|HQ336940.1|betalactams|Class_C_betalactamases|CMY	gi|695224949|ref|NG_041198.1|1-1146
Resfinder	gi|312164949|gb|HQ336940.1|betalactams|Class_C_betalactamases|CMY	blaCMY-53_1_HQ336940
ARG-ANNOT	Bla|OXY1-5|AY077483|181-1056|876|betalactams|Class_A_betalactamases|OXY	(Bla)OXY1-5:AY077483:181-1056:876
NCBI	Bla|OXY1-5|AY077483|181-1056|876|betalactams|Class_A_betalactamases|OXY	gi|18844713|gb|AY077486.1|181-1056 gi|219920928|emb|FM178426.1|1-825
ARG-ANNOT	Bla|OXA-213|JN861781|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-213:JN861781::1-825:825;(Bla)OXA-214:JN861781:1-825:825
CARD	Bla|OXA-213|JN861781|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|JN861781|0-822|ARO:3001712|OXA-213 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-213|JN861781|1-825|825|betalactams|Class_D_betalactamases|OXA	AEV91552.1 JN861781.1:1-822
NCBI	Bla|OXA-213|JN861781|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|360040235|gb|JN861781.1|1-822
Resfinder	Bla|OXA-213|JN861781|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-213_1_JN861781
ARG-ANNOT	Gly|VanW-B|AY655721|3069-3896|828|Glycopeptides|VanB-type_accessory_protein|VANWB	(Gly)VanW-B:AY655721:3069-3896:828
NCBI	Gly|VanW-B|AY655721|3069-3896|828|Glycopeptides|VanB-type_accessory_protein|VANWB	gi|941949718|gb|CP013009.1|128961-128134 gi|827342679|gb|KR066794.1|27080-26253 gi|577698893|gb|KF823968.1|3314-4141 gi|452996225|gb|KC489789.1|2518-3345 gi|452996218|gb|KC489788.1|2518-3345 gi|452996198|gb|KC489785.1|995-1822 gi|452996192|gb|KC489784.1|995-1822 gi|452996186|gb|KC489783.1|995-1822 gi|452996180|gb|KC489782.1|995-1822 gi|452996174|gb|KC489781.1|995-1822
ARG-ANNOT	593|AF319779.2|AF319779|MLS|23S_rRNA_methyltransferases|ERM	(MLS)Erm35:AF319779:33-833:801
CARD	593|AF319779.2|AF319779|MLS|23S_rRNA_methyltransferases|ERM	@phgb|AF319779|0-801|ARO:3000604|Erm(35) [Bacteroides coprosuis DSM 18011]
NCBI	593|AF319779.2|AF319779|MLS|23S_rRNA_methyltransferases|ERM	gi|18652655|gb|AF319779.2|33-833
Resfinder	593|AF319779.2|AF319779|MLS|23S_rRNA_methyltransferases|ERM	erm(35)_1_AF319779
ARG-ANNOT	gi|125658585|gb|EF373971.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-96:EF373971:1-861:861
CARD	gi|125658585|gb|EF373971.1|betalactams|Class_A_betalactamases|SHV	@phgb|EF373971|0-861|ARO:3001148|SHV-96 [Acinetobacter baumannii]
Lahey	gi|125658585|gb|EF373971.1|betalactams|Class_A_betalactamases|SHV	ABN49112.1 EF373971.1:1-861
NCBI	gi|125658585|gb|EF373971.1|betalactams|Class_A_betalactamases|SHV	gi|125658585|gb|EF373971.1|1-861
Resfinder	gi|125658585|gb|EF373971.1|betalactams|Class_A_betalactamases|SHV	blaSHV-96_1_EF373971
Lahey	Bla|OXA-51_5_EU25594|betalactams|Class_D_betalactamases|OXA	ABX45064.1 EU255294.1:1-825
NCBI	Bla|OXA-51_5_EU25594|betalactams|Class_D_betalactamases|OXA	gi|160623393|gb|EU255294.1|1-825
Resfinder	Bla|OXA-51_5_EU25594|betalactams|Class_D_betalactamases|OXA	blaOXA-51_5_EU255294
CARD	CARD|pvgb|NC_007779|3323917-3324766|ARO:3003386|Escherichia|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	@pvgb|NC_007779|3323917-3324766|ARO:3003386|Escherichia coli sulfonamide resistant mutant folP [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|pvgb|NC_007779|3323917-3324766|ARO:3003386|Escherichia|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|1521263-1522112 gi|958627747|gb|CP013253.1|99505-98656 gi|939732440|gb|CP011343.2|3299021-3299870 gi|939731527|gb|CP011342.2|3299766-3300615 gi|937526251|gb|CP012870.1|1317593-1316744 gi|937521852|gb|CP012869.1|1317593-1316744 gi|937517453|gb|CP012868.1|1317593-1316744 gi|932857508|emb|LN877770.1|4148387-4149236 gi|923416119|gb|CP011113.1|3280780-3281629 gi|899729770|gb|CP012127.1|3298508-3299357
NCBI	ACou|NC_012469.1.7686068|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|909837468|gb|CP003357.2|1330914-1328971 gi|556027507|gb|CP006844.1|1250841-1248898 gi|298237097|gb|CP001993.1|1514099-1512156 gi|225726369|gb|CP000921.1|1292320-1290377 gi|73916405|gb|DQ175270.1|1-1944
ARG-ANNOT	AGly|Ant6-Ib|FN594949|27482-28339|858|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	(AGly)Ant6-Ib:FN594949:27482-28339:858
CARD	AGly|Ant6-Ib|FN594949|27482-28339|858|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	@phgb|FN594949|27481-28339|ARO:3002629|ANT(6)-Ib [Campylobacter fetus subsp. fetus]
NCBI	AGly|Ant6-Ib|FN594949|27482-28339|858|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|299469399|emb|FN594949.1|27482-28339 gi|291482100|emb|FN665653.1|480747-481604
Resfinder	AGly|Ant6-Ib|FN594949|27482-28339|858|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	ant(6)-Ib_1_FN594949
NCBI	Bla|AF336097.1|gene1|betalactams|Mutant_porin_proteins|OMP36|RequiresSNPConfirmation	gi|13384120|gb|AF336097.1|1-1128
NCBI	Mdr|CP000034.1|gene2198|Multi-drug_resistance|MDR_regulator|ASMA	gi|81239530|gb|CP000034.1|1999870-2001723
ARG-ANNOT	Rif|Arr3|JF806499|1353-1805|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	(Rif)Arr3:JF806499:1353-1805:453
CARD	Rif|Arr3|JF806499|1353-1805|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	@phgb|EU675686|1956-2409|ARO:3002848|arr-3 [Escherichia coli]
NCBI	Rif|Arr3|JF806499|1353-1805|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|974752094|gb|KT164809.1|570-118 gi|971493847|gb|CP010351.1|169132-169584 gi|948288874|gb|KR259319.1|947-1399 gi|942528113|gb|KR699629.1|947-1399 gi|942528108|gb|KR699628.1|947-1399 gi|942528098|gb|KR699627.1|947-1399 gi|937637492|gb|KT334335.1|117415-117867 gi|933686117|gb|KR827393.1|84979-85431 gi|929916870|gb|KR822247.1|12942-13394 gi|918462945|gb|KP987215.1|21568-21116
Resfinder	Rif|Arr3|JF806499|1353-1805|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	ARR-3_1_JF806499
NCBI	Bla|SHV-11_11_GU064392|betalactams|Class_A_betalactamases|SHV	gi|256862161|gb|GQ389703.1|1-861 gi|77702543|gb|DQ219472.1|1-861
Resfinder	Bla|SHV-11_11_GU064392|betalactams|Class_A_betalactamases|SHV	blaSHV-11_11_GU064392
NCBI	Bla|SHV-11_6_GQ407130|betalactams|Class_A_betalactamases|SHV	gi|257043769|gb|GQ407126.1|1-861
Resfinder	Bla|SHV-11_6_GQ407130|betalactams|Class_A_betalactamases|SHV	blaSHV-11_6_GQ407130
CARD	CARD|phgb|Z33413|386-935|ARO:3000380|FosC|Fosfomycin|Fosfomycin_phosphorylation|FOSC	@phgb|Z33413|386-935|ARO:3000380|FosC [Pseudomonas syringae]
NCBI	CARD|phgb|Z33413|386-935|ARO:3000380|FosC|Fosfomycin|Fosfomycin_phosphorylation|FOSC	gi|391324441|gb|JX102649.1|14809-15358 gi|485963|emb|Z33413.1|387-936 gi|7592779|dbj|D82818.1|1232-1643
NCBI	Rif|NC_012469.1.7686402|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|909837468|gb|CP003357.2|1859029-1855418 gi|556027507|gb|CP006844.1|1781840-1778229 gi|298237097|gb|CP001993.1|2043527-2039916 gi|225726369|gb|CP000921.1|1820840-1817229
CARD	Phe|AF418284.1|gene3|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	@phgb|AF418284|1463-2096|ARO:3002680|catB8 [Pseudomonas aeruginosa]
NCBI	Phe|AF418284.1|gene3|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|20530865|gb|AF418284.1|1464-2096
CARD	1849|AF156486.1|AF156486|Phenicol|Phenicol_efflux_pumps|CML	@phgb|AF156486|3648-4908|ARO:3002694|cmlA4 [Klebsiella pneumoniae]
NCBI	1849|AF156486.1|AF156486|Phenicol|Phenicol_efflux_pumps|CML	gi|6752459|gb|AF156486.1|AF156486|3649-4908
NCBI	Elf|CP001485.1|gene314|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|939204655|gb|CP006947.1|2836031-2834796 gi|861210305|gb|CP007653.1|212677-213912 gi|695931389|gb|CP007634.1|2759960-2761195 gi|657184927|dbj|AP014524.1|212730-213965 gi|356645562|gb|CP003069.1|2759283-2760518 gi|229368777|gb|CP001485.1|304966-303731 gi|227011820|gb|CP001235.1|384708-385943 gi|227008125|gb|CP001233.1|320001-321236 gi|146314918|gb|CP000627.1|2877360-2878595 gi|109703404|gb|DQ773055.1|1-1183
NCBI	MLS|ermB_9_AF299292|MLS|23S_rRNA_methyltransferases|ERMB	gi|938507137|gb|KP842560.1|20891-21628 gi|409183623|gb|JQ663598.1|26630-25893 gi|388535180|gb|CP003585.1|47170-46433 gi|383850702|gb|JN899593.1|211-948 gi|383850692|gb|JN899591.1|273-1010 gi|383850677|gb|JN899588.1|273-1010 gi|373218503|gb|JN607214.1|242-979 gi|323463200|gb|CP002478.1|1849667-1848930 gi|319739722|gb|HQ115078.1|34525-33788 gi|260177113|gb|GQ900487.1|40580-39843
Resfinder	MLS|ermB_9_AF299292|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_9_AF299292
CARD	CARD|pvgb|U00096|2336792-2339420|ARO:3003294|Escherichia|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	@pvgb|U00096|2336792-2339420|ARO:3003294|Escherichia coli gyrA conferring resistance to fluoroquinolones [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|pvgb|U00096|2336792-2339420|ARO:3003294|Escherichia|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|533993-536621 gi|939732440|gb|CP011343.2|2317251-2319879 gi|939731527|gb|CP011342.2|2318081-2320709 gi|937526251|gb|CP012870.1|2304863-2302235 gi|937521852|gb|CP012869.1|2304863-2302235 gi|937517453|gb|CP012868.1|2304863-2302235 gi|932857508|emb|LN877770.1|2701715-2704343 gi|923416119|gb|CP011113.1|2300430-2303058 gi|857137982|gb|CP011495.1|3576696-3579324 gi|817589947|gb|CP011324.1|2328495-2331123
CARD	MLS|ermB_16_X82819|MLS|23S_rRNA_methyltransferases|ERMB	@phgb|X82819|436-1174|ARO:3000375|ErmB [Enterococcus sp.]
NCBI	MLS|ermB_16_X82819|MLS|23S_rRNA_methyltransferases|ERMB	gi|874011340|gb|CP012045.1|1119211-1118474 gi|745811785|gb|CP007593.1|966327-967064 gi|703570643|gb|CP009612.1|1080329-1079592 gi|698841295|emb|LK020698.1|24803-24066 gi|698841065|emb|LK020692.1|27042-27779 gi|698840909|emb|LK020687.1|14848-14111 gi|649571968|emb|HG799503.1|4127-4864 gi|641688100|emb|HG799491.1|44955-44218 gi|556027507|gb|CP006844.1|1747631-1748368 gi|537629960|gb|CP003858.1|644482-645219
NCBI	gi|13591814|gb|AF357597.1|betalactams|Class_C_betalactamases|CMY	gi|695214108|ref|NG_036737.1|5403-6877 gi|13591814|gb|AF357597.1|1-1475 gi|302371353|gb|AF373217.2|1-1171 gi|573013567|dbj|AP013064.1|27532-27602 gi|573013567|dbj|AP013064.1|29787-29857 gi|573013567|dbj|AP013064.1|29906-29976 gi|146150962|gb|EF382672.1|102448-102518 gi|695199441|ref|NG_035225.1|428-498 gi|695200064|ref|NG_035368.1|48-118
CARD	CARD|phgb|HQ529916|110-971|ARO:3001045|TEM-183|betalactams|Class_A_betalactamases|TEM	@phgb|HQ529916|110-971|ARO:3001045|TEM-183 [Klebsiella pneumoniae]
NCBI	CARD|phgb|HQ529916|110-971|ARO:3001045|TEM-183|betalactams|Class_A_betalactamases|TEM	gi|313586334|gb|HQ529916.1|111-972
ARG-ANNOT	Bla|CTX-M-43|HQ734713|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-43:HQ734713:1-876:876
NCBI	Bla|CTX-M-43|HQ734713|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|342308426|gb|HQ734713.1|1-876
NCBI	Gly|VanA-Pt2_4_AY926880|Glycopeptides|VanA-type_resistance_protein|VANA	gi|257412320|gb|AY926880.2|3732-4763
Resfinder	Gly|VanA-Pt2_4_AY926880|Glycopeptides|VanA-type_resistance_protein|VANA	VanPt2_4_AY926880
ARG-ANNOT	MLS|Erm42|FR734406|1-906|906|MLS|23S_rRNA_methyltransferases|ERM42	(MLS)Erm42:FR734406:1-906:906
CARD	MLS|Erm42|FR734406|1-906|906|MLS|23S_rRNA_methyltransferases|ERM42	@phgb|FR734406|0-906|ARO:3003106|Erm(42) [Pasteurella multocida]
NCBI	MLS|Erm42|FR734406|1-906|906|MLS|23S_rRNA_methyltransferases|ERM42	gi|356596244|gb|CP003022.1|290396-291301 gi|313848514|emb|FR734406.1|1-906
Resfinder	MLS|Erm42|FR734406|1-906|906|MLS|23S_rRNA_methyltransferases|ERM42	erm(42)_1_FR734406
ARG-ANNOT	gi|395469607|gb|JQ837239.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-239:JQ837239:1-822:822
CARD	gi|395469607|gb|JQ837239.1|betalactams|Class_D_betalactamases|OXA	@phgb|JQ837239|0-822|ARO:3001498|OXA-239 [Acinetobacter sp. enrichment culture clone 8407]
Lahey	gi|395469607|gb|JQ837239.1|betalactams|Class_D_betalactamases|OXA	AFN65709.1 JQ837239.1:1-822
NCBI	gi|395469607|gb|JQ837239.1|betalactams|Class_D_betalactamases|OXA	gi|395469607|gb|JQ837239.1|1-822
Resfinder	gi|395469607|gb|JQ837239.1|betalactams|Class_D_betalactamases|OXA	blaOXA-239_1_JQ837239
NCBI	AGly|strA_4_NC_003384|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|981191958|emb|LN999997.1|2509425-2510228 gi|975007785|gb|CP010832.1|3628-2825 gi|954666075|gb|KT962845.1|18711-17908 gi|971497891|gb|CP012901.1|3691790-3692593 gi|971339514|gb|CP006662.2|54045-53242 gi|959153704|gb|CP012993.1|20977-21780 gi|959147947|gb|CP012988.1|72243-71440 gi|957647579|dbj|AP017302.1|121620-122423 gi|957647579|dbj|AP017302.1|419616-418813 gi|954171562|gb|KT151663.1|74577-75380 gi|954171278|gb|KT151660.1|74577-75380
Resfinder	AGly|strA_4_NC_003384|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	strA_4_AF321551
CARD	CARD|phgb|GQ150744|122-359|ARO:3003022|dfrB3|Trimethoprim|Dihydrofolate_reductase|DFRB	@phgb|GQ150744|122-359|ARO:3003022|dfrB3 [Klebsiella oxytoca]
NCBI	CARD|phgb|GQ150744|122-359|ARO:3003022|dfrB3|Trimethoprim|Dihydrofolate_reductase|DFRB	gi|742988600|gb|CP010378.1|17621-17384 gi|238820136|gb|GQ150744.1|123-360 gi|22121734|gb|AY123252.1|109-346 gi|70907607|gb|U67194.4|EAU67194|33129-33366 gi|14091019|gb|AF327729.1|98-335 gi|695196883|ref|NG_034557.1|6193-5956
ARG-ANNOT	gi|5457153|gb|AF164577.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-13:AF164577:1-861:861
CARD	gi|5457153|gb|AF164577.1|betalactams|Class_A_betalactamases|SHV	@phgb|AF164577|0-861|ARO:3001072|SHV-13 [Klebsiella pneumoniae]
Lahey	gi|5457153|gb|AF164577.1|betalactams|Class_A_betalactamases|SHV	AAD43815.1 AF164577.1:1-861
NCBI	gi|5457153|gb|AF164577.1|betalactams|Class_A_betalactamases|SHV	gi|5457153|gb|AF164577.1|AF164577|1-861
Resfinder	gi|5457153|gb|AF164577.1|betalactams|Class_A_betalactamases|SHV	blaSHV-13_1_AF164577
ARG-ANNOT	Bla|HERA-4|AJ536088|1-873|873|betalactams|Class_A_betalactamases|HERA	(Bla)HERA-4:AJ536088:1-873:873
NCBI	Bla|HERA-4|AJ536088|1-873|873|betalactams|Class_A_betalactamases|HERA	gi|27805131|emb|AJ536088.1|1-873
Resfinder	Bla|HERA-4|AJ536088|1-873|873|betalactams|Class_A_betalactamases|HERA	blaHERA-4_1_AJ536088
ARG-ANNOT	Bla|SHV-63|EU342351|173-1033|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-63:EU342351:173-1033:861
CARD	Bla|SHV-63|EU342351|173-1033|861|betalactams|Class_A_betalactamases|SHV	@phgb|EU342351|172-1033|ARO:3001118|SHV-63 [Klebsiella pneumoniae]
Lahey	Bla|SHV-63|EU342351|173-1033|861|betalactams|Class_A_betalactamases|SHV	ABY56290.1 EU342351.1:173-1033
NCBI	Bla|SHV-63|EU342351|173-1033|861|betalactams|Class_A_betalactamases|SHV	gi|815976342|gb|CP011313.1|2734371-2735231 gi|164449661|gb|EU342351.1|173-1033
Resfinder	Bla|SHV-63|EU342351|173-1033|861|betalactams|Class_A_betalactamases|SHV	blaSHV-63_1_EU342351
ARG-ANNOT	Bla|TEM-63|AF332513|104-964|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-63:AF332513:104-964:861
CARD	Bla|TEM-63|AF332513|104-964|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF332513|103-964|ARO:3000931|TEM-63 [Escherichia coli]
Lahey	Bla|TEM-63|AF332513|104-964|861|betalactams|Class_A_betalactamases|TEM	AAK17194.1 AF332513.1:104-964
NCBI	Bla|TEM-63|AF332513|104-964|861|betalactams|Class_A_betalactamases|TEM	gi|13272527|gb|AF332513.1|AF332513|104-964
Resfinder	Bla|TEM-63|AF332513|104-964|861|betalactams|Class_A_betalactamases|TEM	blaTEM-63_1_AF332513
ARG-ANNOT	Bla|OXA-250|HE963771|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-250:HE963771:1-825:825
CARD	Bla|OXA-250|HE963771|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HE963771|0-825|ARO:3001675|OXA-250 [Acinetobacter baumannii]
Lahey	Bla|OXA-250|HE963771|1-825|825|betalactams|Class_D_betalactamases|OXA	CCJ32598.1 HE963771.1:1-825
NCBI	Bla|OXA-250|HE963771|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|404432496|emb|HE963771.1|1-825
Resfinder	Bla|OXA-250|HE963771|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-250_1_HE963771
NCBI	Phe|AJ549214.1|gene2|Phenicol|Phenicol_efflux_pumps|FEXA	gi|695227368|ref|NG_041657.1|28078-26638 gi|478895380|gb|KC206006.1|38191-36751 gi|695227162|ref|NG_041619.1|11758-10318 gi|695225704|ref|NG_041398.1|8537-7097 gi|695200656|ref|NG_036155.1|8668-7228 gi|58577493|emb|AJ715531.1|6275-4835 gi|695210468|ref|NG_035946.1|164-1604 gi|695227791|ref|NG_041678.1|18496-17069
CARD	CARD|phgb|AF416700|56-764|ARO:3000842|EBR-1|betalactams|Class_B_betalactamases|EBR1	@phgb|AF416700|56-764|ARO:3000842|EBR-1 beta-lactamase [Empedobacter brevis]
NCBI	CARD|phgb|AF416700|56-764|ARO:3000842|EBR-1|betalactams|Class_B_betalactamases|EBR1	gi|23451047|gb|AF416700.1|57-765
ARG-ANNOT	Bla|FONA-1|AJ251239|1054-1941|888|betalactams|Class_A_betalactamases|FONA	(Bla)FONA-1:AJ251239:1054-1941:888
NCBI	Bla|FONA-1|AJ251239|1054-1941|888|betalactams|Class_A_betalactamases|FONA	gi|6468735|emb|AJ251239.1|1054-1941 gi|557668524|gb|KF484094.1|1-477
Resfinder	Bla|FONA-1|AJ251239|1054-1941|888|betalactams|Class_A_betalactamases|FONA	blaFONA-1_1_AJ251239
NCBI	Sul|NC_002516.2.881715|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|5347833-5346982 gi|553895034|gb|CP006832.1|5335767-5334916 gi|553886202|gb|CP006831.1|5336852-5336001 gi|543879514|gb|CP006705.1|5115352-5114501 gi|110227054|gb|AE004091.2|5335772-5334921
CARD	Phe|AB080798.1|gene5|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|AB080798|2658-3309|ARO:3002670|cat [Streptococcus suis]
NCBI	Phe|AB080798.1|gene5|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|22775395|dbj|AB080798.1|2659-3309
Resfinder	Tet|tet44_1_NZ_ABDU01000081|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET44	tet(44)_1_NZ_ABDU01000081
ARG-ANNOT	Bla|OXA-161|GQ202693|1172-1999|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-161:GQ202693:1172-1999:828
CARD	Bla|OXA-161|GQ202693|1172-1999|828|betalactams|Class_D_betalactamases|OXA	@phgb|GQ202693|1171-1999|ARO:3001799|OXA-161 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-161|GQ202693|1172-1999|828|betalactams|Class_D_betalactamases|OXA	ACT09125.1 GQ202693.1:1172-1999
NCBI	Bla|OXA-161|GQ202693|1172-1999|828|betalactams|Class_D_betalactamases|OXA	gi|247712941|gb|GQ202693.1|1172-1999
Resfinder	Bla|OXA-161|GQ202693|1172-1999|828|betalactams|Class_D_betalactamases|OXA	blaOXA-161_1_GQ202693
CARD	CARD|pvgb|AE005672|800699-803171|ARO:3003311|Streptococcus|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	@pvgb|AE005672|800699-803171|ARO:3003311|Streptococcus pneumonia parC conferring resistance to fluoroquinolone [Streptococcus pneumoniae TIGR4]
NCBI	CARD|pvgb|AE005672|800699-803171|ARO:3003311|Streptococcus|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|193804931|gb|AE005672.3|800700-803172
NCBI	Gly|VanA-D_4_AY89045|Glycopeptides|VanD-type_resistance_protein|VAND	gi|40021670|gb|AY489045.1|4010-5041
Resfinder	Gly|VanA-D_4_AY89045|Glycopeptides|VanD-type_resistance_protein|VAND	VanD_4_AY489045
CARD	CARD|phgb|GU584222|0-747|ARO:3003196|tet45|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET45	@phgb|GU584222|0-747|ARO:3003196|tet45 [Escherichia coli]
NCBI	CARD|phgb|GU584222|0-747|ARO:3003196|tet45|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET45	gi|359359418|gb|JN232540.1|1-747 gi|343794863|gb|JF837331.1|2942-2196 gi|343794857|gb|JF837330.1|2942-2196 gi|324575432|gb|GU584217.2|402-1148
CARD	CARD|phgb|AM087454|208-1069|ARO:3001015|TEM-148|betalactams|Class_A_betalactamases|TEM	@phgb|AM087454|208-1069|ARO:3001015|TEM-148 [Escherichia coli]
NCBI	CARD|phgb|AM087454|208-1069|ARO:3001015|TEM-148|betalactams|Class_A_betalactamases|TEM	gi|157676817|emb|AM087454.1|209-1070
ARG-ANNOT	Bla|AJ920369.1|gene1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-12:FJ685654:24-860:837
CARD	Bla|AJ920369.1|gene1|betalactams|Class_A_betalactamases|SHV	@phgb|AJ920369|23-860|ARO:3001071|SHV-12 [Escherichia coli]
NCBI	Bla|AJ920369.1|gene1|betalactams|Class_A_betalactamases|SHV	gi|961666360|gb|KT185451.1|77461-76625 gi|954629879|gb|CP013215.1|268471-269307 gi|933686117|gb|KR827393.1|97059-97895 gi|918463070|gb|KP987216.1|9638-8802 gi|817046807|gb|KP893385.1|116953-116117 gi|908266278|gb|CP012170.1|159168-160004 gi|902618894|gb|CP011987.1|37160-37996 gi|902611358|gb|CP011977.1|33484-34320 gi|902604381|gb|CP011983.1|6514-7350 gi|873464235|gb|KR059865.1|7838-8674
Resfinder	Bla|AJ920369.1|gene1|betalactams|Class_A_betalactamases|SHV	blaSHV-5_8_AY502004;blaSHV-12_1_AF462395
CARD	gi|757399503|gb|KP050484.1|betalactams|Class_C_betalactamases|MIR	@phgb|KP050484|0-1146|ARO:3002170|MIR-5 [Enterobacter asburiae];@phgb|KP050484|0-1146|ARO:3002173|MIR-8 [Enterobacter asburiae]
NCBI	gi|757399503|gb|KP050484.1|betalactams|Class_C_betalactamases|MIR	gi|757399503|gb|KP050484.1|1-1146
NCBI	Bla|AF167990.3|gene1|betalactams|Class_C_betalactamases|CMY	gi|573013567|dbj|AP013064.1|29985-31245 gi|146150962|gb|EF382672.1|102521-103781 gi|695199441|ref|NG_035225.1|501-1761 gi|58430781|dbj|AB201268.1|1-1149
NCBI	AGly|Aac3-Ib|Aac6-Ib|AF355189|1435-2439|1005|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|18958399|gb|AF355189.1|1837-2439
CARD	CARD|pvgb|AL123456|759806-763325|ARO:3003283|Mycobacterium|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	@pvgb|AL123456|759806-763325|ARO:3003283|Mycobacterium tuberculosis rpoB mutants conferring resistance to rifampicin [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|759806-763325|ARO:3003283|Mycobacterium|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|984985728|gb|CP010338.1|763613-767132 gi|984981517|gb|CP010337.1|762303-765822 gi|984950177|gb|CP010330.1|759765-763284 gi|984945858|gb|CP010329.1|759740-763259 gi|749193065|gb|CP007027.1|759810-763329 gi|737516150|dbj|AP014573.1|763909-767428 gi|690310687|gb|CP009480.1|759213-762732 gi|559794742|gb|CP003248.2|759810-763329 gi|444893469|emb|AL123456.3|759807-763326 gi|378543272|emb|HE608151.1|761752-765271
CARD	Bla|MIR-4_1_EF417572|betalactams|Class_C_betalactamases|MIR	@phgb|EF417572|29-1175|ARO:3002167|MIR-4 [Escherichia coli]
Lahey	Bla|MIR-4_1_EF417572|betalactams|Class_C_betalactamases|MIR	ABN69112.2 EF417572.2:30-1175
NCBI	Bla|MIR-4_1_EF417572|betalactams|Class_C_betalactamases|MIR	gi|695212938|ref|NG_036521.1|30-1175
Resfinder	Bla|MIR-4_1_EF417572|betalactams|Class_C_betalactamases|MIR	blaMIR-4_1_EF417572
ARG-ANNOT	1824|AB777500.1|AB777500|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-43:AB777500:2035-2775:741
CARD	1824|AB777500.1|AB777500|betalactams|Class_B_betalactamases|IMP	@phgb|AB777500|2034-2775|ARO:3002234|IMP-43 [Pseudomonas aeruginosa]
Lahey	1824|AB777500.1|AB777500|betalactams|Class_B_betalactamases|IMP	BAM98935.1 AB777500.1:2035-2775
NCBI	1824|AB777500.1|AB777500|betalactams|Class_B_betalactamases|IMP	gi|459978567|dbj|AB777500.1|2035-2775 gi|282312440|gb|GU213192.1|1-568
Resfinder	1824|AB777500.1|AB777500|betalactams|Class_B_betalactamases|IMP	blaIMP-43_1_AB777500
ARG-ANNOT	gi|21262145|emb|AJ488302.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-42:AJ488302:1-810:810
CARD	gi|21262145|emb|AJ488302.1|betalactams|Class_D_betalactamases|OXA	@phgb|AJ488302|0-810|ARO:3001769|OXA-42 [Burkholderia pseudomallei]
Lahey	gi|21262145|emb|AJ488302.1|betalactams|Class_D_betalactamases|OXA	CAD32564.1 AJ488302.1:1-810
NCBI	gi|21262145|emb|AJ488302.1|betalactams|Class_D_betalactamases|OXA	gi|21262145|emb|AJ488302.1|1-810
Resfinder	gi|21262145|emb|AJ488302.1|betalactams|Class_D_betalactamases|OXA	blaOXA-42_1_AJ488302
NCBI	1482|HF953351.1|HF953351|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	gi|483933409|emb|HF953351.1|10914-12095 gi|695213701|ref|NG_036651.1|4740-5921 gi|785798809|gb|CP011099.1|1616310-1617488 gi|785795794|gb|CP011098.1|1616287-1617465 gi|678222343|gb|KJ909292.1|5117-6295 gi|575439963|gb|CP006942.1|974729-973551 gi|511255433|gb|KC734562.1|4318-5496 gi|511255399|gb|KC734561.1|3612-2434 gi|511255369|gb|KC734560.1|4418-5596 gi|481063295|gb|CP005383.1|2178983-2180161
ARG-ANNOT	Bla|OXA-26|AF201827|22-849|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-26:AF201827:22-849:828
CARD	Bla|OXA-26|AF201827|22-849|828|betalactams|Class_D_betalactamases|OXA	@phgb|AF201827|21-849|ARO:3001421|OXA-26 [Acinetobacter baumannii]
Lahey	Bla|OXA-26|AF201827|22-849|828|betalactams|Class_D_betalactamases|OXA	AAG35608.1 AF201827.1:22-849
NCBI	Bla|OXA-26|AF201827|22-849|828|betalactams|Class_D_betalactamases|OXA	gi|11493693|gb|AF201827.1|AF201827|22-849 gi|908777896|gb|KT022421.1|33-1
Resfinder	Bla|OXA-26|AF201827|22-849|828|betalactams|Class_D_betalactamases|OXA	blaOXA-26_1_AF201827
CARD	gi|343480075|gb|JF274248.1|betalactams|Class_A_betalactamases|CTX	@phgb|JF274248|0-864|ARO:3001969|CTX-M-109 [Shigella sp. SH361]
NCBI	gi|343480075|gb|JF274248.1|betalactams|Class_A_betalactamases|CTX	gi|343480075|gb|JF274248.1|1-865
NCBI	Rif|NC_003112.2.902240|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|325199235|gb|CP002420.1|137098-141282 gi|66731897|gb|AE002098.2|137034-141218
NCBI	Bla|AY077481.1|gene1|betalactams|Class_A_betalactamases|OXY	gi|23264039|gb|AY077481.1|125-1058
NCBI	Tet|tetE_1_Y19116|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	gi|12053583|emb|Y19116.1|1-1196 gi|327195566|gb|HQ399593.1|1-273 gi|296044842|gb|HM041202.1|195-1 gi|296044846|gb|HM041204.1|189-1
ARG-ANNOT	Bla|ACT-4|AJ311172|12-1157|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-4:AJ311172:12-1157:1146
NCBI	Bla|ACT-4|AJ311172|12-1157|1146|betalactams|Class_C_betalactamases|ACT	gi|17432185|emb|AJ311172.1|12-1157
Resfinder	Bla|ACT-4|AJ311172|12-1157|1146|betalactams|Class_C_betalactamases|ACT	blaACT-4_2_AJ311172
NCBI	Tet|tetC_2_NC_003123|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	gi|15822653|gb|AY043298.1|4007-5197 gi|961454902|gb|KT991388.1|7007-6978
Resfinder	Tet|tetC_2_NC_003123|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	tet(C)_2_NC_003123
ARG-ANNOT	Bla|CMY-43|FJ360626|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-43:FJ360626:1-1146:1146;(Bla)CMY-59:HQ267530:1-1146:1146
CARD	Bla|CMY-43|FJ360626|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|FJ360626|0-1146|ARO:3002054|CMY-43 [Escherichia coli]
Lahey	Bla|CMY-43|FJ360626|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ACJ05361.1 FJ360626.1:1-1146
NCBI	Bla|CMY-43|FJ360626|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|209981361|gb|FJ360626.1|1-1146
Resfinder	Bla|CMY-43|FJ360626|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-43_1_HQ267530
ARG-ANNOT	Bla|CTX-M-52|GU125667|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-52:GU125667:1-876:876
CARD	Bla|CTX-M-52|GU125667|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|DQ223685|0-876|ARO:3001914|CTX-M-52 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-52|GU125667|1-876|876|betalactams|Class_A_betalactamases|CTX	ABB17185.1 DQ223685.1:1-876
NCBI	Bla|CTX-M-52|GU125667|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|281335921|gb|GU125667.1|1-876 gi|78057321|gb|DQ223685.1|1-876
Resfinder	Bla|CTX-M-52|GU125667|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-52_1_GU125667
NCBI	Flq|NC_011586.7046500|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|602249473|gb|KC118540.6|117170-114456 gi|213054530|gb|CP001182.1|3132795-3130081
NCBI	Sul|NC_012469.1.7686560|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|909837468|gb|CP003357.2|339598-340575 gi|225726369|gb|CP000921.1|300601-301578
ARG-ANNOT	Bla|OXA-162|GU197550|1-798|798|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-162:GU197550:1-798:798
CARD	Bla|OXA-162|GU197550|1-798|798|betalactams|Class_D_betalactamases|OXA	@phgb|HM015773|2126-2924|ARO:3001776|OXA-162 [Klebsiella pneumoniae]
Lahey	Bla|OXA-162|GU197550|1-798|798|betalactams|Class_D_betalactamases|OXA	ADG27454.1 HM015773.1:2127-2924
NCBI	Bla|OXA-162|GU197550|1-798|798|betalactams|Class_D_betalactamases|OXA	gi|270312218|gb|GU197550.1|1-798 gi|295684221|gb|HM015773.1|2127-2924
Resfinder	Bla|OXA-162|GU197550|1-798|798|betalactams|Class_D_betalactamases|OXA	blaOXA-162_1_GU197550
NCBI	Bla|AF336095.1|gene1|betalactams|Mutant_porin_proteins|OMP36|RequiresSNPConfirmation	gi|13384116|gb|AF336095.1|1-1128
CARD	CARD|phgb|KP143090|1199-1619|ARO:3003209|FosA5|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	@phgb|KP143090|1199-1619|ARO:3003209|FosA5 [Escherichia coli]
NCBI	CARD|phgb|KP143090|1199-1619|ARO:3003209|FosA5|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|748445536|gb|KP143090.1|1200-1619 gi|544169332|gb|KC960485.1|16616-16197 gi|165928586|gb|EU195449.1|19645-19226
CARD	gi|256862199|gb|GQ390807.1|betalactams|Class_A_betalactamases|SHV	@phgb|GQ390807|0-813|ARO:3001172|SHV-125 [Klebsiella pneumoniae]
NCBI	gi|256862199|gb|GQ390807.1|betalactams|Class_A_betalactamases|SHV	gi|256862199|gb|GQ390807.1|1-813
NCBI	gi|11493691|gb|AF201826.1|betalactams|Class_D_betalactamases|OXA	gi|11493691|gb|AF201826.1|AF201826|1-1023 gi|908777896|gb|KT022421.1|54-1
NCBI	1403|FM207631.1|FM207631|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|197244608|emb|FM207631.1|849-1322
CARD	Flq|QnrB64_1_KC580653|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC580653|0-645|ARO:3002776|QnrB64 [Citrobacter freundii]
NCBI	Flq|QnrB64_1_KC580653|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|496297317|gb|KC580653.1|1-645
Resfinder	Flq|QnrB64_1_KC580653|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB64_1_KC580653
ARG-ANNOT	Bla|CTX-M-90|FJ907381|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-90:FJ907381:1-876:876
CARD	Bla|CTX-M-90|FJ907381|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|FJ907381|0-876|ARO:3001950|CTX-M-90 [Salmonella sp. YLD3]
Lahey	Bla|CTX-M-90|FJ907381|1-876|876|betalactams|Class_A_betalactamases|CTX	ACQ99521.1 FJ907381.1:1-876
NCBI	Bla|CTX-M-90|FJ907381|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|696158204|gb|KF840373.1|7960-8835 gi|237511598|gb|FJ907381.1|1-876
Resfinder	Bla|CTX-M-90|FJ907381|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-90_1_FJ907381
CARD	gi|558607399|gb|KF705209.1|betalactams|Class_A_betalactamases|SHV	@phgb|KF705209|0-861|ARO:3001361|SHV-178 [Klebsiella pneumoniae]
Lahey	gi|558607399|gb|KF705209.1|betalactams|Class_A_betalactamases|SHV	AHA80963.1 KF705209.1:1-861
NCBI	gi|558607399|gb|KF705209.1|betalactams|Class_A_betalactamases|SHV	gi|558607399|gb|KF705209.1|1-861
Resfinder	gi|558607399|gb|KF705209.1|betalactams|Class_A_betalactamases|SHV	blaSHV-178_1_KF705209
ARG-ANNOT	Flq|qnrB17|AM919398|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)qnrB17:AM919398:37-681:645
CARD	Flq|qnrB17|AM919398|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|AM919398|0-681|ARO:3002732|QnrB17 [Citrobacter freundii]
NCBI	Flq|qnrB17|AM919398|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|805300621|gb|KP339257.1|145-825 gi|161338641|emb|AM919398.1|1-681
Resfinder	Flq|qnrB17|AM919398|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB17_2_AM919398
CARD	CARD|pvgb|AP009048|1191352-1192024|ARO:3003585|Klebsiella|Cationic_antimicrobial_peptides|Polymyxin-resistant_phoP|phoP|RequiresSNPConfirmation	@phgb|AP009048|1191352-1192024|ARO:3000834|phoP [Escherichia coli str. K-12 substr. W3110];@pvgb|AP009048|1191352-1192024|ARO:3003585|Klebsiella mutant PhoP conferring antibiotic resistance to colistin [Escherichia coli str. K-12 substr. W3110];@pvgb|NC_007779|1191352-1192024|ARO:3003585|Klebsiella mutant PhoP conferring antibiotic resistance to colistin [Escherichia coli str. K-12 substr. W3110];@pvgb|U00096|1189775-1190447|ARO:3003585|Klebsiella mutant PhoP conferring antibiotic resistance to colistin [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|pvgb|AP009048|1191352-1192024|ARO:3003585|Klebsiella|Cationic_antimicrobial_peptides|Polymyxin-resistant_phoP|phoP|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|4028700-4029371 gi|937526251|gb|CP012870.1|3451899-3451228 gi|937521852|gb|CP012869.1|3451900-3451229 gi|937517453|gb|CP012868.1|3451889-3451218 gi|817589947|gb|CP011324.1|1183462-1184133 gi|817585806|gb|CP011323.1|1183462-1184133 gi|817581666|gb|CP011322.1|1183461-1184132 gi|817577526|gb|CP011321.1|1183462-1184133 gi|817573384|gb|CP011320.1|1189000-1189671 gi|749139368|gb|CP010456.1|1196892-1197563
CARD	CARD|phgb|NC_013450|694852-695296|ARO:3000815|mgrA|Multi-drug_resistance|MDR_regulator|MGRA	@phgb|NC_013450|694852-695296|ARO:3000815|mgrA [Staphylococcus aureus subsp. aureus ED98]
NCBI	CARD|phgb|NC_013450|694852-695296|ARO:3000815|mgrA|Multi-drug_resistance|MDR_regulator|MGRA	gi|984671414|emb|LT009690.1|722404-722848 gi|930584899|dbj|AP014942.1|707452-707896 gi|929858715|gb|CP010402.1|722043-722487 gi|927048389|gb|CP010890.1|690558-691002 gi|925190036|gb|CP012593.1|743673-744117 gi|827443540|gb|CP011528.1|686127-686571 gi|803444476|gb|CP011147.1|728457-728901 gi|781886788|dbj|AP014653.1|716312-716756 gi|781883823|dbj|AP014652.1|716312-716756 gi|777211012|emb|LN831036.1|726529-726973
CARD	CARD|phgb|U00096|2158385-2161463|ARO:3000794|mdtC|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTC	@phgb|U00096|2158385-2161463|ARO:3000794|mdtC [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|2158385-2161463|ARO:3000794|mdtC|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTC	gi|985000614|gb|CP014225.1|355585-358663 gi|939732440|gb|CP011343.2|2138543-2141621 gi|939731527|gb|CP011342.2|2139239-2142317 gi|937526251|gb|CP012870.1|2483268-2480190 gi|937521852|gb|CP012869.1|2483268-2480190 gi|937517453|gb|CP012868.1|2483268-2480190 gi|932857508|emb|LN877770.1|2522420-2525498 gi|923416119|gb|CP011113.1|2121248-2124326 gi|899729770|gb|CP012127.1|2139577-2142655 gi|899725419|gb|CP012126.1|2142191-2145269
ARG-ANNOT	Bla|LEN-10|AJ635419|1-789|789|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-10:AJ635419:1-789:789
CARD	Bla|LEN-10|AJ635419|1-789|789|betalactams|Class_A_betalactamases|LEN	@phgb|AJ635419|0-789|ARO:3002460|LEN-10 [Klebsiella pneumoniae]
NCBI	Bla|LEN-10|AJ635419|1-789|789|betalactams|Class_A_betalactamases|LEN	gi|46309213|emb|AJ635419.1|1-789
Resfinder	Bla|LEN-10|AJ635419|1-789|789|betalactams|Class_A_betalactamases|LEN	blaLEN10_1_AJ635419
NCBI	gi|284468331|gb|GU550123.1|betalactams|Class_A_betalactamases|TEM	gi|284468331|gb|GU550123.1|1-1087
ARG-ANNOT	237|S81599.1|S81599|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-Vc:S81599:282-1076:795
CARD	237|S81599.1|S81599|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|S81599|281-1076|ARO:3002651|APH(3')-Vc [Micromonospora chalcea]
NCBI	237|S81599.1|S81599|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|244648|gb|S81599.1|282-1076
Resfinder	237|S81599.1|S81599|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-Vc_1_S81599
ARG-ANNOT	Bla|MIR-4|EF587233|1-1101|1101|betalactams|Class_C_betalactamases|MIR	(Bla)MIR-4:EF587233:1-1101:1101
NCBI	Bla|MIR-4|EF587233|1-1101|1101|betalactams|Class_C_betalactamases|MIR	gi|148283779|gb|EF587233.1|1-1101
NCBI	Flq|CP004022.1|gene2480|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|529186758|gb|CP004022.1|2698902-2695945
NCBI	gi|29650763|gb|AY243512.1|betalactams|Class_A_betalactamases|TEM	gi|29650763|gb|AY243512.1|1-1069
CARD	CARD|phgb|HQ203032|0-345|ARO:3000245|RbpA|Rifampin|RNA-polymerase_binding_protein|RBPA	@phgb|HQ203032|0-345|ARO:3000245|RbpA [Mycobacterium smegmatis str. MC2 155]
NCBI	CARD|phgb|HQ203032|0-345|ARO:3000245|RbpA|Rifampin|RNA-polymerase_binding_protein|RBPA	gi|698956000|gb|CP009496.1|3929322-3929666 gi|698947717|gb|CP009495.1|3929334-3929678 gi|698938524|gb|CP009494.1|3929295-3929639 gi|399228992|gb|CP001663.1|3930862-3931206 gi|319996805|gb|HQ203032.1|1-345 gi|118168627|gb|CP000480.1|3929250-3929594
CARD	706|X04555.1|X04555|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	@phgb|X04555|0-750|ARO:3000230|ANT(2'')-Ia [uncultured bacterium]
NCBI	706|X04555.1|X04555|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	gi|973585379|gb|KP054476.2|32522-33271 gi|973585379|gb|KP054476.2|28055-28265 gi|973585379|gb|KP054476.2|51626-51836 gi|959190351|gb|CP013324.1|126827-126078 gi|957647579|dbj|AP017302.1|414340-413591 gi|957647579|dbj|AP017302.1|2607512-2607722 gi|828952302|gb|CP011622.1|98074-98823 gi|821346305|dbj|LC054840.1|1050-1799 gi|787862679|gb|CP008707.1|37721-36972 gi|662716992|gb|CP008825.1|138347-139096 gi|662716651|gb|CP008824.1|204550-205299 gi|662716651|gb|CP008824.1|269435-269647 gi|662716651|gb|CP008824.1|54656-54865 gi|662716651|gb|CP008824.1|212889-213076 gi|660573358|gb|CP008790.1|155314-156063 gi|660573358|gb|CP008790.1|138837-139047 gi|640855459|gb|CP007732.1|156882-157631 gi|640855459|gb|CP007732.1|221767-221979 gi|640855459|gb|CP007732.1|54667-54876 gi|640855459|gb|CP007732.1|165221-165408
CARD	CARD|phgb|AF173226|351-1041|ARO:3003066|smeR|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	@phgb|AF173226|351-1041|ARO:3003066|smeR [Stenotrophomonas maltophilia]
NCBI	CARD|phgb|AF173226|351-1041|ARO:3003066|smeR|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	gi|5764623|gb|AF173226.1|352-1042
NCBI	Sul|sul1_15_EF667294|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695212668|ref|NG_036469.1|1925-1086
Resfinder	Sul|sul1_15_EF667294|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_15_EF667294
NCBI	MLS|msrA_1_X52085|MLS|Macrolide_resistance_efflux_pumps|MSRA	gi|47000|emb|X52085.1|343-1809
Resfinder	MLS|msrA_1_X52085|MLS|Macrolide_resistance_efflux_pumps|MSRA	msr(A)_1_X52085
ARG-ANNOT	1864|AJ620678.1|AJ620678|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-2:HM131431:1-828:828
CARD	1864|AJ620678.1|AJ620678|betalactams|Class_D_betalactamases|OXA	@phgb|M95287|0-828|ARO:3001397|OXA-2 [Plasmid R46]
Lahey	1864|AJ620678.1|AJ620678|betalactams|Class_D_betalactamases|OXA	CAA30246.1 X07260.1:701-1528
NCBI	1864|AJ620678.1|AJ620678|betalactams|Class_D_betalactamases|OXA	gi|982900359|gb|KT984195.1|1178-2005 gi|957761167|gb|KT440883.1|4930-5757 gi|828958913|gb|CP011634.1|69154-69981 gi|828958913|gb|CP011634.1|165472-166299 gi|828958653|gb|CP011632.1|44387-45214 gi|828945263|gb|CP011614.1|19781-20608 gi|828933472|gb|CP011599.1|37539-38366 gi|828927110|gb|CP011593.1|53200-54027 gi|765526698|gb|KF743818.1|17175-16348 gi|728041178|gb|KJ668593.1|2302-3129 gi|724471669|gb|KM659858.1|2675-3502
Resfinder	1864|AJ620678.1|AJ620678|betalactams|Class_D_betalactamases|OXA	blaOXA-2_1_DQ310703
ARG-ANNOT	Bla|KPC-6|EU555534|1-882|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-6:EU555534:1-882:882
CARD	Bla|KPC-6|EU555534|1-882|882|betalactams|Class_A_betalactamases|KPC	@phgb|EU555534|0-882|ARO:3002316|KPC-6 [Klebsiella pneumoniae]
Lahey	Bla|KPC-6|EU555534|1-882|882|betalactams|Class_A_betalactamases|KPC	ACB71165.1 EU555534.1:1-882
NCBI	Bla|KPC-6|EU555534|1-882|882|betalactams|Class_A_betalactamases|KPC	gi|172054654|gb|EU555534.1|1-882
Resfinder	Bla|KPC-6|EU555534|1-882|882|betalactams|Class_A_betalactamases|KPC	blaKPC-6_1_EU555534
CARD	CARD|phgb|AB219524.1|22-1180|ARO:3003698|mexP|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXP	@phgb|AB219524.1|22-1180|ARO:3003698|mexP [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AB219524.1|22-1180|ARO:3003698|mexP|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXP	gi|968567191|gb|CP013680.1|1955995-1954838 gi|926451317|emb|LN871187.1|1572030-1573187 gi|881079720|gb|CP012066.1|4313903-4312746 gi|589338112|gb|CP006985.1|1637667-1638824 gi|589332184|gb|CP006984.1|1637804-1638961 gi|589326231|gb|CP006983.1|1637604-1638761 gi|589320215|gb|CP006982.1|1637838-1638995 gi|589314341|gb|CP006981.1|1595965-1597122 gi|589308385|gb|CP006980.1|1638191-1639348 gi|576902775|gb|CP007147.1|5637570-5636413
NCBI	Flq|NC_012469.1.7686721|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|909837468|gb|CP003357.2|992417-994885 gi|556027507|gb|CP006844.1|912912-915380 gi|298237097|gb|CP001993.1|1178899-1181367 gi|225726369|gb|CP000921.1|953680-956148 gi|73916173|gb|DQ175154.1|1-2469
CARD	CARD|phgb|JQ808129|4027-4660|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|JQ808129|4027-4660|ARO:3002670|cat [Klebsiella pneumoniae]
NCBI	CARD|phgb|JQ808129|4027-4660|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|958108507|emb|LN824138.1|11571-12204 gi|958102843|emb|LN824133.1|2816842-2817475 gi|957647579|dbj|AP017302.1|2612324-2612957 gi|550602065|gb|KF295829.1|122792-123425 gi|443299869|gb|JQ955744.1|4020-4653 gi|695214903|ref|NG_036913.1|7556-8189 gi|493665175|dbj|AP012055.1|51547-50914 gi|695226706|ref|NG_041561.1|4028-4661
Lahey	1470|unknown_id|unknown_name|betalactams|Class_A_betalactamases|CARB	CCW43444.1 HF953351.1:3358-2462
NCBI	1470|unknown_id|unknown_name|betalactams|Class_A_betalactamases|CARB	gi|483933409|emb|HF953351.1|3358-2462
NCBI	Bla|OXA-2_2_AY444814|betalactams|Class_D_betalactamases|OXA	gi|42563726|gb|AY444814.1|3988-4815
Resfinder	Bla|OXA-2_2_AY444814|betalactams|Class_D_betalactamases|OXA	blaOXA-2_2_AY444814
NCBI	gi|13562034|gb|AF351241.1|betalactams|Class_A_betalactamases|TEM	gi|695200318|ref|NG_035427.1|1-950 gi|943457735|gb|KT818627.1|74996-74889 gi|943457735|gb|KT818627.1|136587-136480 gi|959195734|gb|CP013326.1|60879-60772 gi|959190351|gb|CP013324.1|110333-110226
NCBI	gi|4557167|gb|AF104442.1|betalactams|Class_A_betalactamases|TEM	gi|4557167|gb|AF104442.1|1-1054
ARG-ANNOT	552|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-20:AF024602:1238-2038:801
CARD	552|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	@phgb|NC_010611|251961-252762|ARO:3001415|OXA-20 [Acinetobacter baumannii ACICU]
Lahey	552|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	AAC23554.1 AF024602.1:1238-2038
NCBI	552|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	gi|806639053|gb|KM972600.1|2323-2633 gi|219872982|gb|FJ445404.1|2131-2441 gi|209981013|gb|EU503121.1|7854-8164 gi|183207914|gb|CP000863.1|251962-252272 gi|32172495|gb|AY307114.1|1243-1553 gi|21668215|emb|AJ319747.1|1294-1604 gi|3220157|gb|AF024602.1|AF024602|1238-1548
Resfinder	552|EU503121.1|EU503121|betalactams|Class_D_betalactamases|OXA	blaOXA-20_1_AF024602
ARG-ANNOT	Phe|Cat-pC221|X02529|2267-2914|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)Cat-pC221:X02529:2267-2914:648
CARD	Phe|Cat-pC221|X02529|2267-2914|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|X02529|2266-2914|ARO:3002670|cat [Staphylococcus aureus]
NCBI	Phe|Cat-pC221|X02529|2267-2914|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|757805039|dbj|AB982228.1|1-648 gi|161728768|dbj|AB369999.1|2267-2914 gi|46630|emb|X02529.1|2267-2914 gi|46545|emb|X02166.1|2267-2914 gi|209205|gb|M16192.1|SYNPTZ12|1193-1840 gi|118135712|gb|EF070728.1|1-514
Resfinder	Phe|Cat-pC221|X02529|2267-2914|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	cat(pC221)_1_X02529
CARD	Bla|CTX-M-147_1_KF513180|betalactams|Class_A_betalactamases|CTX	@phgb|KF513180|0-876|ARO:3002005|CTX-M-147 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-147_1_KF513180|betalactams|Class_A_betalactamases|CTX	AHA80961.1 KF513180.1:1-876
NCBI	Bla|CTX-M-147_1_KF513180|betalactams|Class_A_betalactamases|CTX	gi|558607395|gb|KF513180.1|1-876
Resfinder	Bla|CTX-M-147_1_KF513180|betalactams|Class_A_betalactamases|CTX	blaCTX-M-147_1_KF513180
ARG-ANNOT	Bla|CTX-M-107|JF274244|1-864|864|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-107:JF274244:1-864:864
NCBI	Bla|CTX-M-107|JF274244|1-864|864|betalactams|Class_A_betalactamases|CTX	gi|343480067|gb|JF274244.1|864-1
CARD	Bla|KC243783.1|gene1|betalactams|Penicillin_binding_protein|MECA	@phgb|KC243783|0-2007|ARO:3000617|mecA [Staphylococcus aureus]
NCBI	Bla|KC243783.1|gene1|betalactams|Penicillin_binding_protein|MECA	gi|441494908|gb|KC243783.1|1-2007
CARD	270|M33768.1|BACBMRX|Multi-drug_resistance|Multi-drug_efflux_pumps|BMR	@phgb|M33768|194-1364|ARO:3003007|bmr [Bacillus subtilis]
NCBI	270|M33768.1|BACBMRX|Multi-drug_resistance|Multi-drug_efflux_pumps|BMR	gi|5776546|gb|L25604.2|BACBMRURBE|1221-2390 gi|2627063|dbj|D84432.1|BACJH642|224991-223822 gi|142605|gb|M33768.1|BACBMRX|195-1364
ARG-ANNOT	1326|S71932.1|S71932|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-39:D50438:1195-1935:741
CARD	1326|S71932.1|S71932|betalactams|Class_B_betalactamases|IMP	@phgb|AJ223604|1484-2225|ARO:3002192|IMP-1 [Pseudomonas aeruginosa]
Lahey	1326|S71932.1|S71932|betalactams|Class_B_betalactamases|IMP	AAB30289.1 S71932.1:448-1188
NCBI	1326|S71932.1|S71932|betalactams|Class_B_betalactamases|IMP	gi|970567970|dbj|LC107423.1|1672-2412 gi|761589803|dbj|AP014651.1|5292282-5293022 gi|677283264|dbj|AB983593.1|2469-3209 gi|575771410|dbj|AB901045.1|97-837 gi|575771403|dbj|AB901043.1|669-1409 gi|575771381|dbj|AB901038.1|43-783 gi|575771373|dbj|AB901036.1|69-809 gi|575771367|dbj|AB901035.1|57-797 gi|573013567|dbj|AP013064.1|28589-27849 gi|537705843|dbj|AB472901.2|1760-2500 gi|537705843|dbj|AB472901.2|2623-3355
CARD	CARD|phgb|X55640|111-972|ARO:3001064|SHV-5|betalactams|Class_A_betalactamases|SHV	@phgb|X55640|111-972|ARO:3001064|SHV-5 [Klebsiella pneumoniae]
NCBI	CARD|phgb|X55640|111-972|ARO:3001064|SHV-5|betalactams|Class_A_betalactamases|SHV	gi|846281090|gb|KP294351.1|15259-16120 gi|846280946|gb|KP294350.1|15260-16121 gi|800908535|gb|KM406490.1|73373-74234 gi|723258375|gb|CP009883.1|264241-265102 gi|723243622|gb|CP009869.1|124337-123476 gi|678126431|gb|KJ541681.1|27825-26964 gi|662716651|gb|CP008824.1|264940-264079 gi|640855459|gb|CP007732.1|217272-216411 gi|619739382|gb|CP007558.1|217261-216400 gi|407810043|gb|JQ824049.1|16399-15538
CARD	gi|70980483|emb|AM049399.1|betalactams|Class_A_betalactamases|TEM	@phgb|AM049399|0-861|ARO:3001007|TEM-144 [Salmonella enterica subsp. enterica serovar Derby]
Lahey	gi|70980483|emb|AM049399.1|betalactams|Class_A_betalactamases|TEM	CAJ17558.1 AM049399.1:1-861
NCBI	gi|70980483|emb|AM049399.1|betalactams|Class_A_betalactamases|TEM	gi|545190826|emb|HG428760.1|4806-5666 gi|70980483|emb|AM049399.1|1-861
ARG-ANNOT	Bla|OXA-87|DQ348075|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-87:DQ348075:1-825:825
CARD	Bla|OXA-87|DQ348075|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|DQ348075|0-825|ARO:3001704|OXA-87 [Acinetobacter baumannii]
Lahey	Bla|OXA-87|DQ348075|1-825|825|betalactams|Class_D_betalactamases|OXA	ABC84263.1 DQ348075.1:1-825
NCBI	Bla|OXA-87|DQ348075|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|695200860|ref|NG_036194.1|1-825
Resfinder	Bla|OXA-87|DQ348075|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-87_1_DQ348075
NCBI	MLS|AM399080.1|gene2|MLS|Lincosamide_nucleotidyltransferases|LNUA	gi|391225694|gb|JQ861958.1|2562-2077 gi|158526956|gb|EU185047.1|716-231 gi|114425695|emb|AM399080.1|2150-1665 gi|86439166|emb|AM184102.1|2433-1948
ARG-ANNOT	Bla|GOB-13|AY647250|1-879|879|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-13:AY647250:1-879:879
NCBI	Bla|GOB-13|AY647250|1-879|879|betalactams|Class_B_betalactamases|GOB	gi|49798158|gb|AY647250.1|1-879
Resfinder	Bla|GOB-13|AY647250|1-879|879|betalactams|Class_B_betalactamases|GOB	blaGOB-13_1_AY647251
NCBI	Gly|VanY-Pt_3_DQ018710|Glycopeptides|VanA-type_accessory_protein|VANYA	gi|66731632|gb|DQ018710.1|8162-9046
Resfinder	Gly|VanY-Pt_3_DQ018710|Glycopeptides|VanA-type_accessory_protein|VANYA	VanY-Pt_3_DQ018710
CARD	CARD|phgb|HE999704|2734780-2736181|ARO:3000421|norB|Multi-drug_resistance|Multi-drug_efflux_pumps|NORB	@phgb|HE999704|2734780-2736181|ARO:3000421|norB [Listeria monocytogenes]
NCBI	CARD|phgb|HE999704|2734780-2736181|ARO:3000421|norB|Multi-drug_resistance|Multi-drug_efflux_pumps|NORB	gi|584269433|emb|HG813249.1|236128-237529 gi|441472679|emb|HE999705.1|2735127-2736528 gi|441469547|emb|HE999704.1|2734781-2736182
CARD	CARD|phgb|AB372881|8-869|ARO:3001160|SHV-111|betalactams|Class_A_betalactamases|SHV	@phgb|AB372881|8-869|ARO:3001160|SHV-111 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AB372881|8-869|ARO:3001160|SHV-111|betalactams|Class_A_betalactamases|SHV	gi|163914146|dbj|AB372881.1|9-870
CARD	MLS|ermB_6_AF242872|MLS|23S_rRNA_methyltransferases|ERMB	@phgb|AF242872|2131-2878|ARO:3000375|ErmB [Enterococcus faecium]
NCBI	MLS|ermB_6_AF242872|MLS|23S_rRNA_methyltransferases|ERMB	gi|9246952|gb|AF242872.1|2132-2878 gi|695199564|ref|NG_035261.1|3250-3996
Resfinder	MLS|ermB_6_AF242872|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_6_AF242872
ARG-ANNOT	Bla|OXA-21|DQ522237|3974-4801|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-21:DQ522237:3974-4801:825
NCBI	Bla|OXA-21|DQ522237|3974-4801|825|betalactams|Class_D_betalactamases|OXA	gi|102231664|gb|DQ522237.1|3974-4801
ARG-ANNOT	64|L36601.1|STMOLEB|MLS|ABC_transporter|OLEB	(MLS)OleB:L36601:1421-3130:1710
CARD	64|L36601.1|STMOLEB|MLS|ABC_transporter|OLEB	@phgb|L36601|1420-3130|ARO:3003036|oleB [Streptomyces antibioticus]
NCBI	64|L36601.1|STMOLEB|MLS|ABC_transporter|OLEB	gi|556426|gb|L36601.1|STMOLEB|1421-3130 gi|930828324|gb|CP012752.1|85628-85656 gi|924532124|gb|CP011340.1|2461396-2461368 gi|120587178|gb|CP000512.1|1953668-1953695
Resfinder	64|L36601.1|STMOLEB|MLS|ABC_transporter|OLEB	ole(B)_1_L36601
ARG-ANNOT	578|X90856.1|X90856|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-IIb:X90856:388-1194:807
CARD	578|X90856.1|X90856|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|X90856|387-1194|ARO:3002645|APH(3')-IIb [Pseudomonas aeruginosa]
NCBI	578|X90856.1|X90856|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|674252391|gb|CP008739.2|6811959-6812765 gi|953190|emb|X90856.1|388-1194
Resfinder	578|X90856.1|X90856|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-IIb_1_X90856
CARD	CARD|phgb|AF516720|214-1075|ARO:3000968|TEM-105|betalactams|Class_A_betalactamases|TEM	@phgb|AF516720|214-1075|ARO:3000968|TEM-105 [Escherichia coli]
NCBI	CARD|phgb|AF516720|214-1075|ARO:3000968|TEM-105|betalactams|Class_A_betalactamases|TEM	gi|21541784|gb|AF516720.1|215-1076
NCBI	1823|AB777500.1|AB777500|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|459978567|dbj|AB777500.1|1127-1681 gi|441482385|gb|JX982232.1|280-834
ARG-ANNOT	695|GU323019.1|GU323019|betalactams|Class_B_betalactamases|DIM	(Bla)DIM-1:GU323019:1-756:756
CARD	695|GU323019.1|GU323019|betalactams|Class_B_betalactamases|DIM	@phgb|KC004136|40-796|ARO:3000848|DIM-1 [Enterobacter sp. SL1]
NCBI	695|GU323019.1|GU323019|betalactams|Class_B_betalactamases|DIM	gi|957647579|dbj|AP017302.1|2607736-2608491 gi|821346297|dbj|LC054838.1|34-789 gi|444247371|gb|KC004136.2|41-796 gi|291278191|gb|GU323019.1|1-756 gi|931352876|gb|KR605502.1|378-1 gi|931352874|gb|KR605501.1|371-1
Resfinder	695|GU323019.1|GU323019|betalactams|Class_B_betalactamases|DIM	blaDIM-1_1_GU323019
CARD	gi|537430800|gb|KF057030.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF057030|0-825|ARO:3001684|OXA-313 [Acinetobacter baumannii]
Lahey	gi|537430800|gb|KF057030.1|betalactams|Class_D_betalactamases|OXA	AGU69251.1 KF057030.1:1-825
NCBI	gi|537430800|gb|KF057030.1|betalactams|Class_D_betalactamases|OXA	gi|537430800|gb|KF057030.1|1-825
CARD	gi|558605696|gb|KF526117.1|betalactams|Class_C_betalactamases|ACT	@phgb|KF526117|0-1146|ARO:3001841|ACT-20 [Enterobacter hormaechei]
Lahey	gi|558605696|gb|KF526117.1|betalactams|Class_C_betalactamases|ACT	AHA80105.1 KF526117.1:1-1146
NCBI	gi|558605696|gb|KF526117.1|betalactams|Class_C_betalactamases|ACT	gi|558605696|gb|KF526117.1|1-1146
NCBI	Flq|CP004022.1|gene1837|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|529186758|gb|CP004022.1|1979719-1977086
ARG-ANNOT	Bla|cfxA4|AY769933|1-966|966|betalactams|Class_A_betalactamases|CFX	(Bla)cfxA4:AY769933:1-966:966
CARD	Bla|cfxA4|AY769933|1-966|966|betalactams|Class_A_betalactamases|CFX	@phgb|AY769933|0-966|ARO:3003005|CfxA4 [Bacteroides fragilis]
NCBI	Bla|cfxA4|AY769933|1-966|966|betalactams|Class_A_betalactamases|CFX	gi|54660102|gb|AY769933.1|1-966
Resfinder	Bla|cfxA4|AY769933|1-966|966|betalactams|Class_A_betalactamases|CFX	cfxA4_1_AY769933
ARG-ANNOT	1428|AY082011.1|AY082011|Glycopeptides|VanD-type_resistance_protein|VAND	(Gly)VanA-D:AY082011:5901-6932:1032
CARD	1428|AY082011.1|AY082011|Glycopeptides|VanD-type_resistance_protein|VAND	@phgb|AY082011|5900-6932|ARO:3000005|vanD [Enterococcus faecium]
NCBI	1428|AY082011.1|AY082011|Glycopeptides|VanD-type_resistance_protein|VAND	gi|27461214|gb|AY082011.1|5901-6932 gi|11527843|gb|AF277571.1|AF277571|1262-2293
Resfinder	1428|AY082011.1|AY082011|Glycopeptides|VanD-type_resistance_protein|VAND	VanD_3_AY082011
ARG-ANNOT	gi|351735908|gb|JF949915.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-192:JF949915:1-754:754
CARD	gi|351735908|gb|JF949915.1|betalactams|Class_A_betalactamases|TEM	@phgb|JF949915|0-754|ARO:3001052|TEM-192 [Klebsiella pneumoniae]
NCBI	gi|351735908|gb|JF949915.1|betalactams|Class_A_betalactamases|TEM	gi|351735908|gb|JF949915.1|1-754
NCBI	Bla|cphA1_4_AY261376|betalactams|Class_B_betalactamases|CPHA	gi|33150463|gb|AY261376.1|1-765
Resfinder	Bla|cphA1_4_AY261376|betalactams|Class_B_betalactamases|CPHA	cphA1_4_AY261376
CARD	gi|698174193|gb|KM087851.1|betalactams|Class_C_betalactamases|MIR	@phgb|KM087851|0-1146|ARO:3002180|MIR-15 [Enterobacter kobei]
Lahey	gi|698174193|gb|KM087851.1|betalactams|Class_C_betalactamases|MIR	AIT76104.1 KM087851.1:1-1146
NCBI	gi|698174193|gb|KM087851.1|betalactams|Class_C_betalactamases|MIR	gi|698174193|gb|KM087851.1|1-1146
ARG-ANNOT	Bla|GES-17|HQ874631|1-864|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-17:HQ874631:1-864:864
CARD	Bla|GES-17|HQ874631|1-864|864|betalactams|Class_A_betalactamases|GES	@phgb|HQ874631|0-864|ARO:3002346|GES-17 [Escherichia coli]
Lahey	Bla|GES-17|HQ874631|1-864|864|betalactams|Class_A_betalactamases|GES	ADZ48685.1 HQ874631.1:1-864
NCBI	Bla|GES-17|HQ874631|1-864|864|betalactams|Class_A_betalactamases|GES	gi|325990178|gb|HQ874631.1|1-864
Resfinder	Bla|GES-17|HQ874631|1-864|864|betalactams|Class_A_betalactamases|GES	blaGES-17_1_HQ874631
CARD	gi|698174197|gb|KM087853.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087853|0-1140|ARO:3002146|DHA-15 [Klebsiella pneumoniae]
Lahey	gi|698174197|gb|KM087853.1|betalactams|Class_C_betalactamases|DHA	AIT76106.1 KM087853.1:1-1140
NCBI	gi|698174197|gb|KM087853.1|betalactams|Class_C_betalactamases|DHA	gi|698174197|gb|KM087853.1|1-1140
ARG-ANNOT	Bla|TEM-132|AY491682|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-132:AY491682:1-861:861
CARD	Bla|TEM-132|AY491682|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY491682|0-861|ARO:3000996|TEM-132 [Klebsiella pneumoniae]
Lahey	Bla|TEM-132|AY491682|1-861|861|betalactams|Class_A_betalactamases|TEM	AAR84298.1 AY491682.1:1-861
NCBI	Bla|TEM-132|AY491682|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|940516934|dbj|LC091537.1|1008-148 gi|695210341|ref|NG_035930.1|1-861
Resfinder	Bla|TEM-132|AY491682|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-132_1_AY491682
CARD	AGly|aadA1_1_X02340|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|X02340|0-972|ARO:3002601|aadA [Escherichia coli]
NCBI	AGly|aadA1_1_X02340|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|695196162|ref|NG_034339.1|223-1194
Resfinder	AGly|aadA1_1_X02340|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA1_1_X02340
CARD	CARD|phgb|AL009126|2735681-2736536|ARO:3002627|aadK|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	@phgb|AL009126|2735681-2736536|ARO:3002627|aadK [Bacillus subtilis subsp. subtilis str. 168]
NCBI	CARD|phgb|AL009126|2735681-2736536|ARO:3002627|aadK|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|983204966|gb|CP014166.1|2576367-2577222 gi|846133629|gb|CP011882.1|3510722-3511577 gi|807072327|gb|CP011115.1|2735683-2736538 gi|749183975|gb|CP010314.1|2715175-2716030 gi|728887195|gb|CP010053.1|2735445-2736300 gi|728882887|gb|CP010052.1|2735694-2736549 gi|724425628|emb|LN680001.1|2753693-2754548 gi|723796434|emb|LN649259.1|2753691-2754546 gi|670919138|gb|CP005997.1|2541830-2542685 gi|649013680|gb|CP008698.1|2708448-2709303
ARG-ANNOT	1325|X93314.1|X93314|betalactams|Class_A_betalactamases|PER	(Bla)PER-2:X93314:278-1204:927
CARD	1325|X93314.1|X93314|betalactams|Class_A_betalactamases|PER	@phgb|X93314|0-927|ARO:3002364|PER-2 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	1325|X93314.1|X93314|betalactams|Class_A_betalactamases|PER	CAA63714.1 X93314.1:278-1204
NCBI	1325|X93314.1|X93314|betalactams|Class_A_betalactamases|PER	gi|695212374|ref|NG_036403.1|1405-2331 gi|1524367|emb|X93314.1|278-1204 gi|54887463|emb|AJ786366.1|1-796
Resfinder	1325|X93314.1|X93314|betalactams|Class_A_betalactamases|PER	blaPER-2_1_X93314
ARG-ANNOT	gi|291163432|gb|GQ396303.1|betalactams|Class_A_betalactamases|PER	(Bla)PER-6:HM453327:787-1713:927
CARD	gi|291163432|gb|GQ396303.1|betalactams|Class_A_betalactamases|PER	@phgb|GQ396303|0-927|ARO:3002368|PER-6 [Aeromonas allosaccharophila]
Lahey	gi|291163432|gb|GQ396303.1|betalactams|Class_A_betalactamases|PER	ADD80743.1 GQ396303.1:1-927
NCBI	gi|291163432|gb|GQ396303.1|betalactams|Class_A_betalactamases|PER	gi|316994935|gb|HM453327.1|787-1713 gi|316994931|gb|HM453326.1|2871-3797 gi|291163432|gb|GQ396303.1|1-927
Resfinder	gi|291163432|gb|GQ396303.1|betalactams|Class_A_betalactamases|PER	blaPER-6_1_GQ396303
CARD	gi|18482487|gb|AY072920.1|betalactams|Class_A_betalactamases|TEM	@phgb|AY072920|0-861|ARO:3000973|TEM-110 [Klebsiella pneumoniae]
Lahey	gi|18482487|gb|AY072920.1|betalactams|Class_A_betalactamases|TEM	AAL68923.1 AY072920.1:1-861
NCBI	gi|18482487|gb|AY072920.1|betalactams|Class_A_betalactamases|TEM	gi|695221008|ref|NG_039599.1|9511-10371 gi|18482487|gb|AY072920.1|1-861
Resfinder	gi|18482487|gb|AY072920.1|betalactams|Class_A_betalactamases|TEM	blaTEM-110_1_AY072920
ARG-ANNOT	174|AF453998.2|AF453998|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)Ant3''Ih-Aac6-IId:AF453998:3555-4946:1392
CARD	174|AF453998.2|AF453998|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AF453998|3554-4946|ARO:3002598|ANT(3'')-Ii-AAC(6')-IId fusion protein [Serratia marcescens]
NCBI	174|AF453998.2|AF453998|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|310697968|gb|AF453998.2|3555-4369
Resfinder	174|AF453998.2|AF453998|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	ant(3'')-Ih-aac(6')-IId_1_AF453998
CARD	gi|761662701|gb|KP096411.1|betalactams|Class_A_betalactamases|GES	@phgb|KP096411|0-864|ARO:3003181|GES-26 [Pseudomonas aeruginosa]
Lahey	gi|761662701|gb|KP096411.1|betalactams|Class_A_betalactamases|GES	AJP67510.1 KP096411.1:1-864
NCBI	gi|761662701|gb|KP096411.1|betalactams|Class_A_betalactamases|GES	gi|761662701|gb|KP096411.1|1-864
NCBI	gi|302357573|dbj|AB563173.1|betalactams|Class_B_betalactamases|IND	gi|302357573|dbj|AB563173.1|1-858 gi|270266461|gb|GU186045.1|771-800
CARD	Mdr|AL009126.3|gene1906|Multi-drug_resistance|Multi-drug_efflux_pumps|BLT	@phgb|L32599|1236-2439|ARO:3003006|blt [Bacillus subtilis subsp. subtilis str. 168]
NCBI	Mdr|AL009126.3|gene1906|Multi-drug_resistance|Multi-drug_efflux_pumps|BLT	gi|983204966|gb|CP014166.1|2557658-2558860 gi|846133629|gb|CP011882.1|3492017-3493219 gi|807072327|gb|CP011115.1|2716974-2718176 gi|749183975|gb|CP010314.1|2696466-2697668 gi|728887195|gb|CP010053.1|2716736-2717938 gi|728882887|gb|CP010052.1|2716985-2718187 gi|724425628|emb|LN680001.1|2734984-2736186 gi|723796434|emb|LN649259.1|2734982-2736184 gi|670919138|gb|CP005997.1|2523125-2524327 gi|649013680|gb|CP008698.1|2689739-2690941
ARG-ANNOT	Bla|CTX-M-133|AB185834|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-133:AB185834:1-876:876
Lahey	Bla|CTX-M-133|AB185834|1-876|876|betalactams|Class_A_betalactamases|CTX	BAD34467.1 AB185834.1:1-876
NCBI	Bla|CTX-M-133|AB185834|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|146150962|gb|EF382672.1|223069-222194 gi|695210820|ref|NG_035964.1|1-876
Resfinder	Bla|CTX-M-133|AB185834|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-3_8_EF382672
NCBI	AGly|U12338.3|gene7|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|973585379|gb|KP054476.2|51844-52633 gi|971338783|gb|CP006659.2|2297687-2298476 gi|966344239|gb|KT291741.1|94-883 gi|957657109|dbj|LC099465.1|47-836 gi|953007066|gb|CP013143.1|8-797 gi|937637492|gb|KT334335.1|96761-95972 gi|928083869|gb|CP012682.1|73667-72878 gi|923091304|gb|KP942843.1|122-911 gi|918400318|dbj|AP014939.1|110917-111706 gi|908266278|gb|CP012170.1|134701-133912
NCBI	ACou|CP000675.2|gene802|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|225791049|gb|CP000675.2|856068-854188
ARG-ANNOT	Flq|QnrB7|EU043311|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB7:EU043311:1-645:645
CARD	Flq|QnrB7|EU043311|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EU043311|0-645|ARO:3002721|QnrB7 [Enterobacter cloacae]
NCBI	Flq|QnrB7|EU043311|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|172087615|gb|EU043311.3|1-645 gi|695212662|ref|NG_036468.1|2787-3431
Resfinder	Flq|QnrB7|EU043311|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB7_1_EU043311
CARD	CARD|pvgb|NC_002516|471305-471749|ARO:3000506|mexR|Multi-drug_resistance|MDR_regulator|MEXR|RequiresSNPConfirmation	@pvgb|NC_002516|471305-471749|ARO:3000506|mexR [Pseudomonas aeruginosa PAO1]
NCBI	CARD|pvgb|NC_002516|471305-471749|ARO:3000506|mexR|Multi-drug_resistance|MDR_regulator|MEXR|RequiresSNPConfirmation	gi|984361056|gb|CP008873.1|899828-899384 gi|984355403|gb|CP008872.1|753931-754375 gi|974347073|gb|CP008869.1|5635581-5635137 gi|974341323|gb|CP008868.1|2128725-2129169 gi|974335511|gb|CP008867.1|2960283-2960727 gi|974327848|gb|CP008866.1|2998150-2997706 gi|974319461|gb|CP008865.1|3251714-3252158 gi|974298776|gb|CP008864.1|6029176-6029620 gi|974282928|gb|CP008861.1|3257448-3257004 gi|974275390|gb|CP008860.1|1704580-1705024
ARG-ANNOT	Bla|TEM-117|AY130282|1-764|764|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-117:AY130282:1-764:764
CARD	Bla|TEM-117|AY130282|1-764|764|betalactams|Class_A_betalactamases|TEM	@phgb|AY130282|0-764|ARO:3000980|TEM-117 [Escherichia coli]
NCBI	Bla|TEM-117|AY130282|1-764|764|betalactams|Class_A_betalactamases|TEM	gi|28192513|gb|AY130282.1|1-764
CARD	CARD|phgb|AF427127|208-1069|ARO:3000948|TEM-81|betalactams|Class_A_betalactamases|TEM	@phgb|AF427127|208-1069|ARO:3000948|TEM-81 [Escherichia coli]
NCBI	CARD|phgb|AF427127|208-1069|ARO:3000948|TEM-81|betalactams|Class_A_betalactamases|TEM	gi|16798369|gb|AF427127.1|AF427127|209-1070
ARG-ANNOT	Bla|VIM-17|EU118148|1011-1811|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-17:EU118148:1011-1811:801
CARD	Bla|VIM-17|EU118148|1011-1811|801|betalactams|Class_B_betalactamases|VIM	@phgb|EU118148|1010-1811|ARO:3002287|VIM-17 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-17|EU118148|1011-1811|801|betalactams|Class_B_betalactamases|VIM	ABW90721.1 EU118148.2:1011-1811
NCBI	Bla|VIM-17|EU118148|1011-1811|801|betalactams|Class_B_betalactamases|VIM	gi|208879769|gb|EU118148.2|1011-1811
Resfinder	Bla|VIM-17|EU118148|1011-1811|801|betalactams|Class_B_betalactamases|VIM	blaVIM-17_1_EU118148
NCBI	AGly|L06163.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|150950|gb|L06163.1|PSEAAC|518-1074
CARD	CARD|phgb|U00096|2367070-2368039|ARO:3003578|PmrF|Cationic_antimicrobial_peptides|Lipid_A_modification|PMRF	@phgb|U00096|2367070-2368039|ARO:3003578|PmrF [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|2367070-2368039|ARO:3003578|PmrF|Cationic_antimicrobial_peptides|Lipid_A_modification|PMRF	gi|985000614|gb|CP014225.1|564271-565240 gi|958627747|gb|CP013253.1|1048471-1047502 gi|958612453|gb|CP013048.1|1876986-1876017 gi|939732440|gb|CP011343.2|2347529-2348498 gi|939731527|gb|CP011342.2|2348454-2349423 gi|937526251|gb|CP012870.1|2274585-2273616 gi|937521852|gb|CP012869.1|2274585-2273616 gi|937517453|gb|CP012868.1|2274585-2273616 gi|932857508|emb|LN877770.1|2731993-2732962 gi|923416119|gb|CP011113.1|2330708-2331677
NCBI	Flq|NC_006582.1.3204559|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|56908016|dbj|AP006627.1|6654-9146
CARD	CARD|phgb|GQ131574|70-916|ARO:3000861|rmtC|Aminoglycosides|16S_rRNA_methyltransferases|RMTC	@phgb|GQ131574|70-916|ARO:3000861|rmtC [Salmonella enterica subsp. enterica serovar Virchow]
NCBI	CARD|phgb|GQ131574|70-916|ARO:3000861|rmtC|Aminoglycosides|16S_rRNA_methyltransferases|RMTC	gi|848612398|gb|KP826710.1|10353-11199 gi|829596799|gb|KR351290.1|95509-96355 gi|760460095|gb|KJ812998.1|99534-100380 gi|760460086|gb|KJ802405.1|105720-104874 gi|678126661|gb|KJ802404.1|105720-104874 gi|756790415|gb|KJ588779.1|106846-106000 gi|746616500|gb|KJ921649.1|6029-5183 gi|636634060|gb|KJ476816.1|80-926 gi|591389235|gb|KF992018.1|106843-105997 gi|586641330|gb|KF732966.1|69881-70727
ARG-ANNOT	CARD|phgb|M98270|0-759|ARO:3002624|ANT4-PRIME-IIa|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	(AGly)Ant4-IIa:M98270:145-903:759
CARD	CARD|phgb|M98270|0-759|ARO:3002624|ANT4-PRIME-IIa|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	@phgb|M98270|0-759|ARO:3002624|ANT(4')-IIa [Pseudomonas aeruginosa]
NCBI	CARD|phgb|M98270|0-759|ARO:3002624|ANT4-PRIME-IIa|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	gi|151026|gb|M98270.1|PSEANT4IIA|145-903
Resfinder	CARD|phgb|M98270|0-759|ARO:3002624|ANT4-PRIME-IIa|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	ant(4')-IIa_1_M98270
CARD	1297|KM926622.1|KM926622|betalactams|Class_C_betalactamases|ACT	@phgb|KM926622|238-1384|ARO:3003172|ACT-37 [Enterobacter cloacae]
Lahey	1297|KM926622.1|KM926622|betalactams|Class_C_betalactamases|ACT	AJG06172.1 KM926622.1:239-1384
NCBI	1297|KM926622.1|KM926622|betalactams|Class_C_betalactamases|ACT	gi|752115662|gb|KM926622.1|239-1384 gi|742984403|gb|CP010377.1|441466-440321
ARG-ANNOT	CARD|phgb|EF672680|0-729|ARO:3000841|CGB-1|betalactams|Class_B_betalactamases|CGB	(Bla)CGB-1:EF672680:1-729:729
CARD	CARD|phgb|EF672680|0-729|ARO:3000841|CGB-1|betalactams|Class_B_betalactamases|CGB	@phgb|EF672680|0-729|ARO:3000841|CGB-1 beta-lactamase [Chryseobacterium gleum]
NCBI	CARD|phgb|EF672680|0-729|ARO:3000841|CGB-1|betalactams|Class_B_betalactamases|CGB	gi|152143852|gb|EF672680.1|1-729
Resfinder	CARD|phgb|EF672680|0-729|ARO:3000841|CGB-1|betalactams|Class_B_betalactamases|CGB	blaCGB-1_1_EF672680
NCBI	Bla|SHV-2_4_GU064394|betalactams|Class_A_betalactamases|SHV	gi|262477942|gb|GU064394.1|1-861
Resfinder	Bla|SHV-2_4_GU064394|betalactams|Class_A_betalactamases|SHV	blaSHV-2_4_GU064394
Lahey	Bla|OXA-51_6_EU255293|betalactams|Class_D_betalactamases|OXA	ABX45063.1 EU255293.1:1-825
NCBI	Bla|OXA-51_6_EU255293|betalactams|Class_D_betalactamases|OXA	gi|160623391|gb|EU255293.1|1-825
Resfinder	Bla|OXA-51_6_EU255293|betalactams|Class_D_betalactamases|OXA	blaOXA-51_6_EU255293
ARG-ANNOT	gi|315227436|gb|HQ322613.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-56:HQ322613:1-1146:1146
CARD	gi|315227436|gb|HQ322613.1|betalactams|Class_C_betalactamases|CMY	@phgb|HQ322613|0-1146|ARO:3002067|CMY-56 [Klebsiella pneumoniae]
Lahey	gi|315227436|gb|HQ322613.1|betalactams|Class_C_betalactamases|CMY	ADT91162.1 HQ322613.1:1-1146
NCBI	gi|315227436|gb|HQ322613.1|betalactams|Class_C_betalactamases|CMY	gi|315227436|gb|HQ322613.1|1-1146
Resfinder	gi|315227436|gb|HQ322613.1|betalactams|Class_C_betalactamases|CMY	blaCMY-56_1_HQ322613
NCBI	1402|FM207631.1|FM207631|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|197244608|emb|FM207631.1|172-714 gi|971497538|gb|CP012902.1|60114-60058 gi|493665175|dbj|AP012055.1|178492-178436 gi|485460042|dbj|AB759690.1|23637-23693
Resfinder	1402|FM207631.1|FM207631|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	ARR-3_4_FM207631
ARG-ANNOT	AGly|AadA16|EU675686|3197-4042|846|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA16:EU675686:3197-4042:846
CARD	AGly|AadA16|EU675686|3197-4042|846|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|EU675686|3196-4042|ARO:3002616|aadA16 [Escherichia coli]
NCBI	AGly|AadA16|EU675686|3197-4042|846|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|695213466|ref|NG_036608.1|3197-4042
Resfinder	AGly|AadA16|EU675686|3197-4042|846|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA16_1_EU675686
ARG-ANNOT	Flq|QnrA5|DQ058663|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	(Flq)QnrA5:DQ058663:1-657:657
CARD	Flq|QnrA5|DQ058663|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	@phgb|DQ058663|0-657|ARO:3002711|QnrA5 [Shewanella algae]
NCBI	Flq|QnrA5|DQ058663|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	gi|70609065|gb|DQ058663.1|1-657
Resfinder	Flq|QnrA5|DQ058663|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	QnrA5_1_DQ058663
CARD	CARD|phgb|X55652|1123-1939|ARO:3002536|AAC3-IIIa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|X55652|1123-1939|ARO:3002536|AAC(3)-IIIa [Pseudomonas aeruginosa]
NCBI	CARD|phgb|X55652|1123-1939|ARO:3002536|AAC3-IIIa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|45264|emb|X55652.1|1124-1940
NCBI	gi|221149271|gb|EU418913.1|betalactams|Class_A_betalactamases|SHV	gi|221149271|gb|EU418913.1|1-897
CARD	Bla|SHV-5_5_S82452|betalactams|Class_A_betalactamases|SHV	@phgb|S82452|120-978|ARO:3001068|SHV-9 [Klebsiella pneumoniae]
Lahey	Bla|SHV-5_5_S82452|betalactams|Class_A_betalactamases|SHV	AAB37395.2 S82452.1:121-978
NCBI	Bla|SHV-5_5_S82452|betalactams|Class_A_betalactamases|SHV	gi|695197752|ref|NG_034800.1|121-978
Resfinder	Bla|SHV-5_5_S82452|betalactams|Class_A_betalactamases|SHV	blaSHV-5_5_S82452
CARD	CARD|phgb|L06160|983-1721|ARO:3002537|AAC3-IIIb|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|L06160|983-1721|ARO:3002537|AAC(3)-IIIb [Pseudomonas aeruginosa]
NCBI	CARD|phgb|L06160|983-1721|ARO:3002537|AAC3-IIIb|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|150953|gb|L06160.1|PSEAAC3B|984-1722 gi|150953|gb|L06160.1|PSEAAC3B|2496-2587
NCBI	Phe|U12338.3|gene8|Phenicol|Phenicol_efflux_pumps|CML	gi|937637492|gb|KT334335.1|95895-94451 gi|917657445|gb|KR827684.1|43816-45260 gi|909636816|emb|LN850165.1|97737-99181 gi|909636430|emb|LN850162.1|2424-3868 gi|828971497|gb|CP011644.1|28053-29497 gi|754341646|gb|CP010575.1|10635-12079 gi|743008998|gb|CP010362.1|64155-62711 gi|742999823|gb|CP010396.1|6628-5184 gi|660582341|gb|CP008800.1|54959-56403 gi|587656709|gb|KF921569.1|3087-4531
ARG-ANNOT	AGly|Aac6-I30|AY289608|1524-2078|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-I30:AY289608:1524-2078:555
CARD	AGly|Aac6-I30|AY289608|1524-2078|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AY289608|1523-2078|ARO:3002588|AAC(6')-I30 [Salmonella enterica subsp. enterica serovar Agona]
NCBI	AGly|Aac6-I30|AY289608|1524-2078|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|31096285|gb|AY289608.1|1524-2078
Resfinder	AGly|Aac6-I30|AY289608|1524-2078|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-I30_1_AY289608
ARG-ANNOT	Flq|QnrB31|HQ418999|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB31:HQ418999:1-645:645
CARD	Flq|QnrB31|HQ418999|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HQ418999|0-681|ARO:3002746|QnrB31 [Klebsiella pneumoniae]
NCBI	Flq|QnrB31|HQ418999|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224951|ref|NG_041199.1|1-681
Resfinder	Flq|QnrB31|HQ418999|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB31_1_HQ418999
CARD	CARD|phgb|X55353|278-713|ARO:3002553|AAC6-PRIME-If|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|X55353|278-713|ARO:3002553|AAC(6')-If [Enterobacter cloacae]
NCBI	CARD|phgb|X55353|278-713|ARO:3002553|AAC6-PRIME-If|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|42414|emb|X55353.1|279-714
NCBI	Bla|B-9_1_AY348324|betalactams|Class_B_betalactamases|BLAB	gi|33772767|gb|AY348324.1|1-747
Resfinder	Bla|B-9_1_AY348324|betalactams|Class_B_betalactamases|BLAB	blaB-9_1_AY348324
ARG-ANNOT	Bla|OKP-A-8|AM051147|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-8:AM051147:1-861:861
CARD	Bla|OKP-A-8|AM051147|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051147|0-861|ARO:3002425|OKP-A-8 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-8|AM051147|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655075|emb|AM051147.1|1-861
Resfinder	Bla|OKP-A-8|AM051147|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-8_1_AM051147
CARD	Flq|KJ415247.1|gene1|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KJ415247|0-645|ARO:3002786|QnrB74 [Escherichia coli]
NCBI	Flq|KJ415247.1|gene1|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|618884914|gb|KJ415247.1|1-645
ARG-ANNOT	Tet|TetC|EU751612|1-1191|1191|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	(Tet)TetC:EU751612:1-1191:1191
NCBI	Tet|TetC|EU751612|1-1191|1191|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	gi|961454902|gb|KT991388.1|1293-103 gi|961454902|gb|KT991388.1|6978-7007 gi|954665409|gb|KT072898.1|4416-5606 gi|933685907|gb|KR827392.1|16075-14885 gi|825088250|gb|KP975074.1|124202-125392 gi|823682865|emb|LN831184.1|226875-228065 gi|808740283|gb|CP011301.1|4026739-4025549 gi|764145230|gb|KM604642.1|2836-4026 gi|700587978|gb|KM649682.1|30703-31893 gi|671774994|gb|KM017924.1|2847-1657 gi|671774987|gb|KM017921.1|2006-3196
Resfinder	Tet|TetC|EU751612|1-1191|1191|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	tet(C)_5_NC_003213
NCBI	Rif|CP003583.1|gene2745|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|670923222|gb|CP006030.1|2645532-2641906 gi|529202214|gb|CP006620.1|2947163-2943537 gi|445187230|gb|CP004063.1|2588043-2584417 gi|388532432|gb|CP003583.1|2650680-2647054 gi|378937014|gb|CP003351.1|2907495-2903869
NCBI	1198|JN118546.1|JN118546|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|355336852|gb|JN118546.1|123-677
CARD	Bla|JX192924.1|gene1|betalactams|Class_A_betalactamases|SHV	@phgb|KJ776406|16-877|ARO:3001340|SHV-119 [Klebsiella pneumoniae]
Lahey	Bla|JX192924.1|gene1|betalactams|Class_A_betalactamases|SHV	AIG51284.1 KJ776406.1:17-877
NCBI	Bla|JX192924.1|gene1|betalactams|Class_A_betalactamases|SHV	gi|666914763|gb|KJ776406.1|17-877 gi|452835785|gb|JX192924.1|30-890
CARD	AGly|aph2-dprime-Ib_1_AF337947|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	@phgb|AF337947|271-1171|ARO:3002635|APH(2'')-IIa [Escherichia coli]
NCBI	AGly|aph2-dprime-Ib_1_AF337947|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	gi|14485641|gb|AF337947.1|272-1171
Resfinder	AGly|aph2-dprime-Ib_1_AF337947|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	aph(2'')-Ib_1_AF337947
CARD	1261|AY178993.1|AY178993|betalactams|Class_A_betalactamases|CARB	@phgb|AY178993|574-1471|ARO:3002247|CARB-8 [Oligella urethralis]
Lahey	1261|AY178993.1|AY178993|betalactams|Class_A_betalactamases|CARB	AAO59455.1 AY178993.1:575-1471
NCBI	1261|AY178993.1|AY178993|betalactams|Class_A_betalactamases|CARB	gi|30171148|gb|AY178993.1|575-1471
Resfinder	1261|AY178993.1|AY178993|betalactams|Class_A_betalactamases|CARB	blaCARB-8_1_AY178993
CARD	CARD|phgb|KF976462|111558-112122|ARO:3003011|dfrA10|Trimethoprim|Dihydrofolate_reductase|DFRA	@phgb|KF976462|111558-112122|ARO:3003011|dfrA10 [Klebsiella pneumoniae]
NCBI	CARD|phgb|KF976462|111558-112122|ARO:3003011|dfrA10|Trimethoprim|Dihydrofolate_reductase|DFRA	gi|686483886|gb|KM111266.1|1716-2280 gi|596353652|gb|KF976462.2|111559-112123 gi|169147133|emb|CU459141.1|3652397-3651833 gi|695210403|ref|NG_035939.1|10679-11243 gi|695208251|ref|NG_035505.1|5494-6058 gi|16151138|gb|AY049746.1|3571-4135 gi|85813394|emb|CT025832.1|50374-50938 gi|686483839|gb|KM111275.1|3628-3847
ARG-ANNOT	Bla|PER-7|JQ639792|6580-7506|927|betalactams|Class_A_betalactamases|PER	(Bla)PER-7:JQ639792:6580-7506:927
CARD	Bla|PER-7|JQ639792|6580-7506|927|betalactams|Class_A_betalactamases|PER	@phgb|HQ713678|5756-6683|ARO:3002369|PER-7 [Acinetobacter baumannii]
Lahey	Bla|PER-7|JQ639792|6580-7506|927|betalactams|Class_A_betalactamases|PER	AEI54993.1 HQ713678.1:5757-6683
NCBI	Bla|PER-7|JQ639792|6580-7506|927|betalactams|Class_A_betalactamases|PER	gi|969995310|gb|KT317086.1|6646-7572 gi|969995276|gb|KT317085.1|18755-19681 gi|884906146|gb|CP012007.1|101633-102559 gi|748952317|dbj|LC020101.1|5578-6504 gi|693581773|dbj|AP014650.1|15590-14664 gi|695226643|ref|NG_041551.1|6580-7506 gi|336441522|gb|HQ713678.1|5757-6683
Resfinder	Bla|PER-7|JQ639792|6580-7506|927|betalactams|Class_A_betalactamases|PER	blaPER-7_1_HQ713678
NCBI	823|AJ878850.1|AJ878850|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|742797756|emb|LK054503.1|28152-27634 gi|290889360|gb|GU784921.1|133-651 gi|218963122|gb|FJ495083.1|120-638 gi|124377167|emb|AJ878850.1|584-1102
CARD	CARD|phgb|HQ433580|0-512|ARO:3003723|VanI|Glycopeptides|VanI-type_resistance_protein|VANI	@phgb|HQ433580|0-512|ARO:3003723|VanI [Desulfitobacterium hafniense DP7]
NCBI	CARD|phgb|HQ433580|0-512|ARO:3003723|VanI|Glycopeptides|VanI-type_resistance_protein|VANI	gi|349602218|gb|HQ433580.1|1-512
ARG-ANNOT	Bla|CTX-M-3|Y10278|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-3:Y10278:1-876:876
CARD	Bla|CTX-M-3|Y10278|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|Y10278|0-876|ARO:3001866|CTX-M-3 [Citrobacter freundii]
NCBI	Bla|CTX-M-3|Y10278|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|953271687|gb|KT175891.1|137-1012 gi|930714478|gb|KR093975.1|153-1028 gi|930714476|gb|KR093974.1|183-1058 gi|923480230|gb|KP902666.1|203-1078 gi|800908771|gb|KP125893.1|130342-129467 gi|762041701|gb|KJ201887.1|9169-8294 gi|668347631|dbj|AB976577.1|1932-2807 gi|668347606|dbj|AB976571.1|1232-2107 gi|668347594|dbj|AB976568.1|1325-2200 gi|578355140|gb|KF914891.1|43942-43067
Resfinder	Bla|CTX-M-3|Y10278|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-3_2_EF437434
CARD	1692|JN704570.1|JN704570|betalactams|Class_D_betalactamases|OXA	@phgb|JN704570|4038-4836|ARO:3001814|OXA-199 [Shewanella xiamenensis]
Lahey	1692|JN704570.1|JN704570|betalactams|Class_D_betalactamases|OXA	AFC95894.1 JN704570.1:4039-4836
NCBI	1692|JN704570.1|JN704570|betalactams|Class_D_betalactamases|OXA	gi|925170665|gb|KR780671.1|1036-1833 gi|379139226|gb|JN704570.1|4039-4836
NCBI	Bla|SHV-5_7_AY570962|betalactams|Class_A_betalactamases|SHV	gi|695211016|ref|NG_035987.1|1-861 gi|846281090|gb|KP294351.1|15265-16119 gi|846280946|gb|KP294350.1|15266-16120 gi|800908535|gb|KM406490.1|73379-74233 gi|723258375|gb|CP009883.1|264247-265101 gi|723243622|gb|CP009869.1|124331-123477 gi|678126431|gb|KJ541681.1|27819-26965 gi|662716651|gb|CP008824.1|264934-264080 gi|640855459|gb|CP007732.1|217266-216412 gi|619739382|gb|CP007558.1|217255-216401
Resfinder	Bla|SHV-5_7_AY570962|betalactams|Class_A_betalactamases|SHV	blaSHV-5_7_AY570962
ARG-ANNOT	Bla|CTX-M-55|HM748991|321-1196|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-55:HM748991:321-1196:876;(Bla)CTX-M-57:DQ810789:228-1103:876
CARD	Bla|CTX-M-55|HM748991|321-1196|876|betalactams|Class_A_betalactamases|CTX	@phgb|DQ885477|0-876|ARO:3001917|CTX-M-55 [Escherichia coli]
Lahey	Bla|CTX-M-55|HM748991|321-1196|876|betalactams|Class_A_betalactamases|CTX	ABI34705.1 DQ885477.1:1-876
NCBI	Bla|CTX-M-55|HM748991|321-1196|876|betalactams|Class_A_betalactamases|CTX	gi|983039673|gb|KU306845.1|1-876 gi|951216344|dbj|LC095456.1|1-876 gi|951216340|dbj|LC095454.1|1-876 gi|951216334|dbj|LC095451.1|1-876 gi|951216330|dbj|LC095449.1|1-876 gi|946724862|gb|KT022224.1|109-984 gi|931322261|gb|KR186073.1|202-1077 gi|918463128|gb|KP987217.1|5796-6671 gi|827884005|dbj|AB672504.1|1-876 gi|818476716|gb|KJ866866.1|84298-83423
Resfinder	Bla|CTX-M-55|HM748991|321-1196|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-55_2_GQ456159
ARG-ANNOT	Bla|VIM-24|HM855205|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-24:HM855205:1-801:801
CARD	Bla|VIM-24|HM855205|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|HM855205|0-801|ARO:3002294|VIM-24 [Klebsiella pneumoniae]
Lahey	Bla|VIM-24|HM855205|1-801|801|betalactams|Class_B_betalactamases|VIM	ADL27533.1 HM855205.1:1-801
NCBI	Bla|VIM-24|HM855205|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|302340960|gb|HM855205.1|1-801
Resfinder	Bla|VIM-24|HM855205|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-24_1_HM855205
NCBI	gi|74422858|gb|DQ174308.1|betalactams|Class_A_betalactamases|SHV	gi|74422858|gb|DQ174308.1|1-865
CARD	CARD|phgb|EF660563|392-845|ARO:3002850|arr-5|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	@phgb|EF660563|392-845|ARO:3002850|arr-5 [Klebsiella pneumoniae]
NCBI	CARD|phgb|EF660563|392-845|ARO:3002850|arr-5|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|157272132|gb|EF660563.1|393-846
CARD	CARD|phgb|NC_007779|1621287-1621671|ARO:3000263|marA|Multi-drug_resistance|MDR_regulator|MARA	@phgb|NC_007779|1621287-1621671|ARO:3000263|marA [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|NC_007779|1621287-1621671|ARO:3000263|marA|Multi-drug_resistance|MDR_regulator|MARA	gi|985000614|gb|CP014225.1|4458498-4458882 gi|984297099|gb|CP014197.1|2252615-2252231 gi|971520884|gb|CP008697.1|2473169-2473553 gi|958627747|gb|CP013253.1|1795952-1795568 gi|958612453|gb|CP013048.1|2608672-2608288 gi|939732440|gb|CP011343.2|1600555-1600939 gi|939731527|gb|CP011342.2|1601264-1601648 gi|937526251|gb|CP012870.1|3022098-3021714 gi|937521852|gb|CP012869.1|3022098-3021714 gi|937517453|gb|CP012868.1|3022091-3021707
CARD	MLS|ermB_17_X64695|MLS|23S_rRNA_methyltransferases|ERMB	@phgb|X64695|8008-8746|ARO:3000375|ErmB [Streptococcus pyogenes]
NCBI	MLS|ermB_17_X64695|MLS|23S_rRNA_methyltransferases|ERMB	gi|695197022|ref|NG_034603.1|8009-8746 gi|1532093|gb|U35228.1|SLU35228|1535-798
ARG-ANNOT	Flq|QnrB28|HM439643|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB28:HM439643:1-645:645
CARD	Flq|QnrB28|HM439643|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HM439643|0-645|ARO:3002743|QnrB28 [Citrobacter freundii]
NCBI	Flq|QnrB28|HM439643|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224417|ref|NG_041070.1|1-645
Resfinder	Flq|QnrB28|HM439643|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB28_1_HM439643
ARG-ANNOT	Bla|OXA-230|JQ422054|101-931|831|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-230:JQ422054:101-931:831
CARD	Bla|OXA-230|JQ422054|101-931|831|betalactams|Class_D_betalactamases|OXA	@phgb|JQ422054|100-931|ARO:3001693|OXA-230 [Acinetobacter bereziniae]
Lahey	Bla|OXA-230|JQ422054|101-931|831|betalactams|Class_D_betalactamases|OXA	AFM55002.1 JQ422054.1:101-931
NCBI	Bla|OXA-230|JQ422054|101-931|831|betalactams|Class_D_betalactamases|OXA	gi|392295713|gb|JQ422054.1|101-931
Resfinder	Bla|OXA-230|JQ422054|101-931|831|betalactams|Class_D_betalactamases|OXA	blaOXA-230_1_JQ422054
CARD	AGly|DQ677333.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|DQ677333|0-780|ARO:3002621|aadA24 [Salmonella enterica subsp. enterica serovar Newport]
NCBI	AGly|DQ677333.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|723759024|gb|KP056256.1|113355-114134 gi|305670853|gb|HQ023863.1|110722-111501 gi|305644344|gb|HQ123586.1|88-867 gi|229561762|gb|FJ621588.1|116172-116951 gi|133905002|gb|CP000604.1|126116-126895 gi|110348465|gb|DQ677333.1|1-780
ARG-ANNOT	1420|DQ018710.1|DQ018710|Glycopeptides|VanA-type_resistance_protein|VANXA	(Gly)VanX-Pt:DQ018710:7107-7715:609
NCBI	1420|DQ018710.1|DQ018710|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|66731632|gb|DQ018710.1|7107-7715
Resfinder	1420|DQ018710.1|DQ018710|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-Pt_3_DQ018710
ARG-ANNOT	Bla|CTX-M-105|HQ833651|245-1120|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-105:HQ833651:245-1120:876
CARD	Bla|CTX-M-105|HQ833651|245-1120|876|betalactams|Class_A_betalactamases|CTX	@phgb|HQ833651|244-1120|ARO:3001965|CTX-M-105 [Escherichia coli]
Lahey	Bla|CTX-M-105|HQ833651|245-1120|876|betalactams|Class_A_betalactamases|CTX	ADY02554.1 HQ833651.1:245-1120
NCBI	Bla|CTX-M-105|HQ833651|245-1120|876|betalactams|Class_A_betalactamases|CTX	gi|359359384|gb|JN232518.1|5358-6233 gi|323709074|gb|HQ833651.1|245-1120
Resfinder	Bla|CTX-M-105|HQ833651|245-1120|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-105_1_HQ833651
ARG-ANNOT	Bla|Y16410.1|gene2|betalactams|Class_C_betalactamases|DHA	(Bla)DHA-1:HM193083:987-2126:1140
CARD	Bla|Y16410.1|gene2|betalactams|Class_C_betalactamases|DHA	@phgb|Y16410|986-2126|ARO:3002132|DHA-1 [Salmonella enterica subsp. enterica serovar Enteritidis]
Lahey	Bla|Y16410.1|gene2|betalactams|Class_C_betalactamases|DHA	CAA76196.1 Y16410.1:987-2126
NCBI	Bla|Y16410.1|gene2|betalactams|Class_C_betalactamases|DHA	gi|929916961|gb|KT225462.1|29912-31051 gi|822476033|dbj|LC055503.1|120917-119778 gi|686483882|gb|KM111265.1|3286-2147 gi|633894420|emb|HG918041.1|140803-141942 gi|614461886|gb|KJ504228.1|5855-4716 gi|571430855|gb|KF793937.1|41805-40666 gi|563322895|gb|KF646592.1|14866-13727 gi|555235253|gb|KF250428.1|113696-112557 gi|474560630|gb|KC848778.1|13258-12119 gi|389960039|gb|JQ356870.1|20023-18884
Resfinder	Bla|Y16410.1|gene2|betalactams|Class_C_betalactamases|DHA	blaDHA-1_1_Y16410
ARG-ANNOT	Flq|QnrB14|EU273757|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB14:EU273757:37-681:645
CARD	Flq|QnrB14|EU273757|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EU273757|0-681|ARO:3002728|QnrB14 [Citrobacter freundii]
NCBI	Flq|QnrB14|EU273757|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|161579481|gb|EU273757.1|1-681
Resfinder	Flq|QnrB14|EU273757|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB14_1_EU273757
NCBI	gi|591389149|gb|KF986257.1|betalactams|Class_D_betalactamases|OXA	gi|591389149|gb|KF986257.1|1-888
ARG-ANNOT	Bla|OXA-347|JN086160|1583-2407|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-347:JN086160:1583-2407:825
Lahey	Bla|OXA-347|JN086160|1583-2407|825|betalactams|Class_D_betalactamases|OXA	AET35493.1 JN086160.1:2407-1583
NCBI	Bla|OXA-347|JN086160|1583-2407|825|betalactams|Class_D_betalactamases|OXA	gi|969868918|gb|CP013690.1|2395536-2394712 gi|969868918|gb|CP013690.1|3426125-3425301 gi|356668588|gb|JN086160.1|2407-1583
CARD	CARD|phgb|NC_010066|9682-10528|ARO:3000621|PC1|betalactams|Class_A_betalactamases|BLAZ	@phgb|NC_010066|9682-10528|ARO:3000621|PC1 beta-lactamase (blaZ) [Staphylococcus aureus subsp. aureus USA300_TCH959]
NCBI	CARD|phgb|NC_010066|9682-10528|ARO:3000621|PC1|betalactams|Class_A_betalactamases|BLAZ	gi|941145663|gb|CP007673.1|16393-17239 gi|828464226|gb|CP007675.1|11599-10753 gi|828444740|gb|CP007671.1|16793-17639 gi|160369760|gb|CP000732.1|9683-10529
ARG-ANNOT	Bla|VIM-30|JN129451|88-888|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-30:JN129451:88-888:801
CARD	Bla|VIM-30|JN129451|88-888|801|betalactams|Class_B_betalactamases|VIM	@phgb|JN129451|87-888|ARO:3002300|VIM-30 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-30|JN129451|88-888|801|betalactams|Class_B_betalactamases|VIM	AET05999.1 JN129451.1:88-888
NCBI	Bla|VIM-30|JN129451|88-888|801|betalactams|Class_B_betalactamases|VIM	gi|355526407|gb|JN129451.1|88-888
Resfinder	Bla|VIM-30|JN129451|88-888|801|betalactams|Class_B_betalactamases|VIM	blaVIM-30_1_JN129451
NCBI	Gly|VanA-A_1_FJ866609|Glycopeptides|VanA-type_resistance_protein|VANA	gi|227069718|gb|FJ866609.1|4723-5754
Resfinder	Gly|VanA-A_1_FJ866609|Glycopeptides|VanA-type_resistance_protein|VANA	VanA_1_FJ866609
CARD	CARD|phgb|V01499|230-1256|ARO:3002655|APH4-Ia|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH4	@phgb|V01499|230-1256|ARO:3002655|APH(4)-Ia [Escherichia coli]
NCBI	CARD|phgb|V01499|230-1256|ARO:3002655|APH4-Ia|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH4	gi|961494526|gb|KT282968.1|19949-18923 gi|946714163|dbj|LC029925.1|1106-2132 gi|946714158|dbj|LC029924.1|1106-2132 gi|937637492|gb|KT334335.1|113085-112059 gi|820773184|gb|KM877269.1|117378-116352 gi|831358012|emb|LN735561.1|9098-10124 gi|831357773|emb|LN735559.1|9098-10124 gi|831357650|emb|LN735558.1|8275-9301 gi|828971497|gb|CP011644.1|36239-37265 gi|754341646|gb|CP010575.1|20532-21558
NCBI	gi|11493693|gb|AF201827.1|betalactams|Class_D_betalactamases|OXA	gi|11493693|gb|AF201827.1|AF201827|1-1023
NCBI	1400|EU912537.1|EU912537|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|197111879|gb|EU912537.1|2092-2646
Resfinder	1400|EU912537.1|EU912537|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')_3_EU912537
CARD	gi|433285822|emb|HE819402.1|betalactams|Class_C_betalactamases|ACT	@phgb|HE819402|0-1146|ARO:3001835|ACT-13 [Enterobacter asburiae]
Lahey	gi|433285822|emb|HE819402.1|betalactams|Class_C_betalactamases|ACT	CCK86741.1 HE819402.1:1-1146
NCBI	gi|433285822|emb|HE819402.1|betalactams|Class_C_betalactamases|ACT	gi|433285822|emb|HE819402.1|1-1146
NCBI	gi|20805893|gb|AF506748.1|betalactams|Class_A_betalactamases|TEM	gi|20805893|gb|AF506748.1|1-899 gi|45332239|gb|AY524415.2|1-899
ARG-ANNOT	936|EU590124.1|EU590124|MLS|23S_rRNA_methyltransferases|ERM41	(MLS)Erm41:EU590124:258-779:522
NCBI	936|EU590124.1|EU590124|MLS|23S_rRNA_methyltransferases|ERM41	gi|751143692|gb|KP676141.1|1-522 gi|197112112|gb|EU590124.1|258-779
ARG-ANNOT	Bla|OXY1-2|AJ871865|1-876|876|betalactams|Class_A_betalactamases|OXY	(Bla)OXY1-2:AJ871865:1-876:876
CARD	Bla|OXY1-2|AJ871865|1-876|876|betalactams|Class_A_betalactamases|OXY	@phgb|AJ871865|0-876|ARO:3002390|OXY-1-2 [Klebsiella oxytoca]
NCBI	Bla|OXY1-2|AJ871865|1-876|876|betalactams|Class_A_betalactamases|OXY	gi|18844709|gb|AY077484.1|179-1054 gi|60416694|emb|AJ871864.1|1-876
Resfinder	Bla|OXY1-2|AJ871865|1-876|876|betalactams|Class_A_betalactamases|OXY	blaOXY-1-2_2_AJ871864
CARD	gi|694179373|gb|KM233164.1|betalactams|Class_A_betalactamases|SHV	@phgb|KM233164|0-861|ARO:3003152|SHV-185 [Klebsiella pneumoniae]
Lahey	gi|694179373|gb|KM233164.1|betalactams|Class_A_betalactamases|SHV	AIS67768.1 KM233164.1:1-861
NCBI	gi|694179373|gb|KM233164.1|betalactams|Class_A_betalactamases|SHV	gi|694179373|gb|KM233164.1|1-861
ARG-ANNOT	gi|8118215|gb|AF231133.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-28:FJ374756:1337-2137:801
CARD	gi|8118215|gb|AF231133.1|betalactams|Class_D_betalactamases|OXA	@phgb|AF231133|1345-2146|ARO:3001423|OXA-28 [Pseudomonas aeruginosa]
Lahey	gi|8118215|gb|AF231133.1|betalactams|Class_D_betalactamases|OXA	AAF72942.1 AF231133.1:1346-2146
NCBI	gi|8118215|gb|AF231133.1|betalactams|Class_D_betalactamases|OXA	gi|311629587|gb|FJ207466.2|2205-3005 gi|211908033|gb|FJ374756.1|1337-2137 gi|695199682|ref|NG_035290.1|1346-2146
Resfinder	gi|8118215|gb|AF231133.1|betalactams|Class_D_betalactamases|OXA	blaOXA-28_1_FJ374756
NCBI	Tet|tet39_2_EU495991|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET39	gi|924867386|gb|KT346360.1|2120-2830 gi|187384667|gb|EU495991.1|1-711 gi|187384663|gb|EU495989.1|711-1 gi|695211247|ref|NG_036045.1|1730-1020 gi|77745205|gb|DQ195075.1|675-2
CARD	CARD|pvgb|AL123456|1674201-1675011|ARO:3003393|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Isoniazid-resistant_inhA|INHA|RequiresSNPConfirmation	@pvgb|AL123456|1674201-1675011|ARO:3003393|Mycobacterium tuberculosis inhA mutations conferring resistance to isoniazid [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|1674201-1675011|ARO:3003393|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Isoniazid-resistant_inhA|INHA|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|1683140-1683950 gi|984989958|gb|CP010339.1|1676227-1677037 gi|984985728|gb|CP010338.1|1680556-1681366 gi|984981517|gb|CP010337.1|1678459-1679269 gi|984976917|gb|CP010336.1|1676089-1676899 gi|984972452|gb|CP010335.1|3223903-3223093 gi|984963331|gb|CP010333.1|1682730-1683540 gi|984959134|gb|CP010332.1|1675485-1676295 gi|984954355|gb|CP010331.1|1670088-1670898 gi|984950177|gb|CP010330.1|1675688-1676498
CARD	CARD|pvgb|U00096|1619119-1619554|ARO:3003378|Escherichia|Multi-drug_resistance|MDR_regulator|MARR|RequiresSNPConfirmation	@pvgb|U00096|1619119-1619554|ARO:3003378|Escherichia coli marR mutant resulting in antibiotic resistance [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|pvgb|U00096|1619119-1619554|ARO:3003378|Escherichia|Multi-drug_resistance|MDR_regulator|MARR|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|4458044-4458479 gi|958627747|gb|CP013253.1|1796406-1795971 gi|939732440|gb|CP011343.2|1600101-1600536 gi|939731527|gb|CP011342.2|1600810-1601245 gi|937526251|gb|CP012870.1|3022552-3022117 gi|937521852|gb|CP012869.1|3022552-3022117 gi|937517453|gb|CP012868.1|3022545-3022110 gi|932857508|emb|LN877770.1|1981495-1981930 gi|923416119|gb|CP011113.1|1581423-1581858 gi|899729770|gb|CP012127.1|1598690-1599125
ARG-ANNOT	Bla|TEM-115|AF535127|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-115:AF535127:209-1069:861
CARD	Bla|TEM-115|AF535127|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF535127|208-1069|ARO:3000978|TEM-115 [Klebsiella pneumoniae]
Lahey	Bla|TEM-115|AF535127|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAN04881.1 AF535127.1:209-1069
NCBI	Bla|TEM-115|AF535127|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|22725666|gb|AF535127.1|209-1069 gi|808157946|gb|KP870110.1|4250-4200
Resfinder	Bla|TEM-115|AF535127|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-115_1_AF535127
NCBI	gi|12060144|gb|AF201828.2|betalactams|Class_D_betalactamases|OXA	gi|12060144|gb|AF201828.2|AF201828|1-1062 gi|939559781|gb|CP012952.1|1232386-1232467 gi|939559781|gb|CP012952.1|2561141-2561222 gi|939559781|gb|CP012952.1|2743155-2743074 gi|939559781|gb|CP012952.1|1035980-1036060 gi|939559781|gb|CP012952.1|1312277-1312197 gi|939559781|gb|CP012952.1|1549317-1549237 gi|939559781|gb|CP012952.1|1673965-1673885 gi|939559781|gb|CP012952.1|1976686-1976766 gi|939559781|gb|CP012952.1|2359896-2359816 gi|939559781|gb|CP012952.1|3581430-3581510 gi|939559781|gb|CP012952.1|3705318-3705238 gi|939559781|gb|CP012952.1|3838592-3838512 gi|939559781|gb|CP012952.1|3855125-3855045 gi|693578048|dbj|AP014649.1|718278-718359 gi|693578048|dbj|AP014649.1|477947-477867 gi|693578048|dbj|AP014649.1|2686880-2686960 gi|693578048|dbj|AP014649.1|2905183-2905103 gi|693578048|dbj|AP014649.1|3755940-3755860 gi|984881271|gb|CP014215.1|432616-432696 gi|984881271|gb|CP014215.1|2332338-2332258 gi|984881271|gb|CP014215.1|2825934-2826014 gi|984881271|gb|CP014215.1|3326705-3326785 gi|984686374|gb|HQ700358.2|8155-8235 gi|974022331|gb|CP013924.1|914680-914600 gi|974022331|gb|CP013924.1|1418214-1418294 gi|974022331|gb|CP013924.1|3335874-3335794 gi|884906331|gb|CP012008.1|45430-45350 gi|884902522|gb|CP012006.1|3691827-3691747 gi|827403829|gb|CP010779.1|3022167-3022087 gi|730910803|gb|KM977710.1|29944-30024
CARD	CARD|phgb|NC_007779|4336858-4337950|ARO:3003583|PmrB|Cationic_antimicrobial_peptides|Polymyxin_B_resistance_regulator|PMRB	@phgb|NC_007779|4336858-4337950|ARO:3003583|PmrB [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|NC_007779|4336858-4337950|ARO:3003583|PmrB|Cationic_antimicrobial_peptides|Polymyxin_B_resistance_regulator|PMRB	gi|985000614|gb|CP014225.1|2529270-2530362 gi|958612453|gb|CP013048.1|4564453-4563361 gi|939732440|gb|CP011343.2|4312185-4313277 gi|939731527|gb|CP011342.2|4312871-4313963 gi|937526251|gb|CP012870.1|309472-308380 gi|937521852|gb|CP012869.1|309472-308380 gi|937517453|gb|CP012868.1|309472-308380 gi|932857508|emb|LN877770.1|132900-133992 gi|923416119|gb|CP011113.1|4290246-4291338 gi|857137982|gb|CP011495.1|909611-910703
NCBI	Mdr|NC_002745.1124085|Multi-drug_resistance|MDR_regulator|ARLS	gi|984671414|emb|LT009690.1|1468485-1467130 gi|974697948|dbj|AP017320.1|1455544-1454189 gi|927048389|gb|CP010890.1|1429829-1428474 gi|925190036|gb|CP012593.1|1428157-1426802 gi|827443540|gb|CP011528.1|1390990-1389635 gi|595636499|gb|CP007454.1|2466984-2468339 gi|408436493|emb|HE579073.1|1401884-1400529 gi|408434508|emb|HE579071.1|1401835-1400480 gi|408432519|emb|HE579069.1|1402061-1400706 gi|408430526|emb|HE579067.1|1402020-1400665
NCBI	Bla|AF518567.2|gene4|betalactams|Class_A_betalactamases|CTX	gi|657224404|gb|KF056330.2|145961-146976 gi|37789822|gb|AF518567.2|2181-3196
ARG-ANNOT	gi|166850617|gb|EU402393.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-69:EU402393:1-876:876
CARD	gi|166850617|gb|EU402393.1|betalactams|Class_A_betalactamases|CTX	@phgb|EU402393|0-876|ARO:3001930|CTX-M-69 [Escherichia coli]
Lahey	gi|166850617|gb|EU402393.1|betalactams|Class_A_betalactamases|CTX	ABY91281.1 EU402393.1:1-876
NCBI	gi|166850617|gb|EU402393.1|betalactams|Class_A_betalactamases|CTX	gi|166850617|gb|EU402393.1|1-876
Resfinder	gi|166850617|gb|EU402393.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-69_1_EU402393
CARD	Bla|CTX-M-79_1_GU125666|betalactams|Class_A_betalactamases|CTX	@phgb|EF426798|0-876|ARO:3001940|CTX-M-79 [Escherichia coli]
Lahey	Bla|CTX-M-79_1_GU125666|betalactams|Class_A_betalactamases|CTX	ABO09821.1 EF426798.1:1-876
NCBI	Bla|CTX-M-79_1_GU125666|betalactams|Class_A_betalactamases|CTX	gi|399228980|gb|JX306034.1|228-1103 gi|399228974|gb|JX306032.1|1300-2175 gi|205362236|gb|FJ169498.1|598-1473 gi|126256517|gb|EF426798.1|1-876
Resfinder	Bla|CTX-M-79_1_GU125666|betalactams|Class_A_betalactamases|CTX	blaCTX-M-79_1_GU125666
NCBI	gi|595583485|gb|KF992028.1|betalactams|Class_C_betalactamases|ACT	gi|595583485|gb|KF992028.1|660-1907
ARG-ANNOT	Tmt|DfrA20|AJ605332|1304-1813|510|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA20:AJ605332:1304-1813:510
CARD	Tmt|DfrA20|AJ605332|1304-1813|510|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|AJ605332|1303-1813|ARO:3003016|dfrA20 [Pasteurella multocida]
NCBI	Tmt|DfrA20|AJ605332|1304-1813|510|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|695210938|ref|NG_035982.1|1304-1813
Resfinder	Tmt|DfrA20|AJ605332|1304-1813|510|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA20_1_AJ605332
NCBI	1133|JQ407409.1|JQ407409|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|383216584|gb|JQ407409.1|2163-2681 gi|383216582|gb|JQ407408.1|1-519
ARG-ANNOT	1650|U36911.1|SAU36911|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-116:AY425988:6-866:861
CARD	1650|U36911.1|SAU36911|betalactams|Class_A_betalactamases|TEM	@phgb|NC_002156|1429-2290|ARO:3000979|TEM-116 [Staphylococcus aureus]
Lahey	1650|U36911.1|SAU36911|betalactams|Class_A_betalactamases|TEM	AAB39956.1 U36911.1:1430-2290
NCBI	1650|U36911.1|SAU36911|betalactams|Class_A_betalactamases|TEM	gi|985700753|dbj|LC122351.1|10529-11389 gi|985700752|dbj|LC122350.1|4189-3329 gi|984294689|gb|KT388099.1|2398-3258 gi|984658881|dbj|LC121522.1|861-1 gi|984658875|dbj|LC121520.1|5103-5963 gi|982518459|gb|KT428598.1|1-861 gi|974994122|gb|KR997561.1|5936-6796 gi|982281055|emb|LT009459.1|1412-2272 gi|982281046|emb|LT009458.1|1412-2272 gi|982281035|emb|LT009457.1|1412-2272
Resfinder	1650|U36911.1|SAU36911|betalactams|Class_A_betalactamases|TEM	blaTEM-116_7_AY425988
NCBI	Elf|FQ312006.1|gene760|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|301168602|emb|FQ312006.1|706383-705199 gi|301168602|emb|FQ312006.1|780699-781883
CARD	Elf|CP000675.2|gene385|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP000675|419342-420533|ARO:3001312|elfamycin resistant EF-Tu [Legionella pneumophila str. Corby]
NCBI	Elf|CP000675.2|gene385|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|225791049|gb|CP000675.2|419343-420533
CARD	CARD|phgb|AF441286|224-965|ARO:3000843|MUS-1|betalactams|Class_B_betalactamases|MUS	@phgb|AF441286|224-965|ARO:3000843|MUS-1 beta-lactamase [Myroides odoratimimus]
NCBI	CARD|phgb|AF441286|224-965|ARO:3000843|MUS-1|betalactams|Class_B_betalactamases|MUS	gi|969868918|gb|CP013690.1|982034-982775 gi|736012191|gb|CP010327.1|1031430-1032171 gi|24637302|gb|AF441286.1|225-966
ARG-ANNOT	Bla|TEM-71|AF203816|211-1071|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-71:AF203816:211-1071:861
CARD	Bla|TEM-71|AF203816|211-1071|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF203816|210-1071|ARO:3000937|TEM-71 [Klebsiella pneumoniae]
Lahey	Bla|TEM-71|AF203816|211-1071|861|betalactams|Class_A_betalactamases|TEM	AAL03985.1 AF203816.1:211-1071
NCBI	Bla|TEM-71|AF203816|211-1071|861|betalactams|Class_A_betalactamases|TEM	gi|695208184|ref|NG_035490.1|211-1071
Resfinder	Bla|TEM-71|AF203816|211-1071|861|betalactams|Class_A_betalactamases|TEM	blaTEM-71_1_AF203816
CARD	CARD|phgb|EU250284|1996-2578|ARO:3002968|vanXYL|Glycopeptides|VanL-type_resistance_protein|VANXYL	@phgb|EU250284|1996-2578|ARO:3002968|vanXYL [Enterococcus faecalis]
NCBI	CARD|phgb|EU250284|1996-2578|ARO:3002968|vanXYL|Glycopeptides|VanL-type_resistance_protein|VANXYL	gi|160947039|gb|EU250284.1|1997-2579
ARG-ANNOT	Bla|SHV-161|JX121128|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-161:JX121128:1-861:861
CARD	Bla|SHV-161|JX121128|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|JX121128|0-861|ARO:3001200|SHV-161 [Klebsiella pneumoniae]
Lahey	Bla|SHV-161|JX121128|1-861|861|betalactams|Class_A_betalactamases|SHV	AFQ23967.1 JX121128.1:1-861
NCBI	Bla|SHV-161|JX121128|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|401871180|gb|JX121128.1|1-861
Resfinder	Bla|SHV-161|JX121128|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-161_1_JX121128
CARD	Mdr|NC_002516.2.881078|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXC	@phgb|U57969|294-1458|ARO:3000800|mexC [Pseudomonas aeruginosa]
NCBI	Mdr|NC_002516.2.881078|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXC	gi|926451317|emb|LN871187.1|5155391-5154228 gi|553895034|gb|CP006832.1|5155395-5154232 gi|553886202|gb|CP006831.1|5156480-5155317 gi|543879514|gb|CP006705.1|4934980-4933817 gi|110227054|gb|AE004091.2|5155400-5154237 gi|1399756|gb|U57969.1|PAU57969|295-1458
CARD	CARD|phgb|U35369|839-2183|ARO:3002932|vanSB|Glycopeptides|VanB-type_regulator|VANSB	@phgb|U35369|839-2183|ARO:3002932|vanSB [Enterococcus faecalis]
NCBI	CARD|phgb|U35369|839-2183|ARO:3002932|vanSB|Glycopeptides|VanB-type_regulator|VANSB	gi|29350190|gb|AE016830.1|2218126-2216783 gi|1209525|gb|U35369.1|EFU35369|840-2183
CARD	gi|734704267|gb|KM588352.1|betalactams|Class_D_betalactamases|OXA	@phgb|KM588352|0-825|ARO:3003147|OXA-424 [Acinetobacter baumannii]
Lahey	gi|734704267|gb|KM588352.1|betalactams|Class_D_betalactamases|OXA	AJA32742.1 KM588352.1:1-825
NCBI	gi|734704267|gb|KM588352.1|betalactams|Class_D_betalactamases|OXA	gi|734704267|gb|KM588352.1|1-825
CARD	Bla|FR717535.1|gene1|betalactams|Class_A_betalactamases|TEM	@phgb|FR717535|0-861|ARO:3000910|TEM-40 [Escherichia coli]
Lahey	Bla|FR717535.1|gene1|betalactams|Class_A_betalactamases|TEM	CBX53726.1 FR717535.1:1-861
NCBI	Bla|FR717535.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|410124574|emb|FR717535.1|1-861
NCBI	Tet|tetL_7_D12567|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	gi|532329|dbj|D12567.1|BACTETBSR|546-1922
Resfinder	Tet|tetL_7_D12567|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	tet(L)_7_D12567
NCBI	Sul|NC_007622.3794340|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|82655308|emb|AJ938182.1|512315-513118
ARG-ANNOT	Bla|CMY-84|JQ733579|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-84:JQ733579:1028-2173:1146
CARD	Bla|CMY-84|JQ733579|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ733579|1027-2173|ARO:3002097|CMY-84 [Citrobacter freundii]
Lahey	Bla|CMY-84|JQ733579|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	AFK73455.1 JQ733579.1:1028-2173
NCBI	Bla|CMY-84|JQ733579|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	gi|388564859|gb|JQ733579.1|1028-2173
Resfinder	Bla|CMY-84|JQ733579|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-84_1_JQ733579
ARG-ANNOT	Bla|RAHN-2|HM114350|377-1264|888|betalactams|Class_A_betalactamases|RAHN	(Bla)RAHN-2:HM114350:377-1264:888
NCBI	Bla|RAHN-2|HM114350|377-1264|888|betalactams|Class_A_betalactamases|RAHN	gi|308922609|gb|HM114350.1|377-1264
Resfinder	Bla|RAHN-2|HM114350|377-1264|888|betalactams|Class_A_betalactamases|RAHN	blaRAHN-2_2_HM114350
ARG-ANNOT	Bla|KPC-9|FJ624872|1-854|854|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-9:FJ624872:1-854:854
NCBI	Bla|KPC-9|FJ624872|1-854|854|betalactams|Class_A_betalactamases|KPC	gi|223558116|gb|FJ624872.1|1-854
Resfinder	Bla|KPC-9|FJ624872|1-854|854|betalactams|Class_A_betalactamases|KPC	blaKPC-9_1_FJ624872
ARG-ANNOT	Gly|VanH-Pt2|AY926880|2771-3739|969|Glycopeptides|VanA-type_resistance_protein|VANHA	(Gly)VanH-Pt2:AY926880:2771-3739:969
NCBI	Gly|VanH-Pt2|AY926880|2771-3739|969|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|257412320|gb|AY926880.2|2771-3739
Resfinder	Gly|VanH-Pt2|AY926880|2771-3739|969|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-Pt2_4_AY926880
ARG-ANNOT	Bla|B-3|AF162284|1-750|750|betalactams|Class_B_betalactamases|BLAB	(Bla)B-3:AF162284:1-750:750
NCBI	Bla|B-3|AF162284|1-750|750|betalactams|Class_B_betalactamases|BLAB	gi|5453457|gb|AF162284.1|AF162284|1-750
ARG-ANNOT	Bla|SHV-157|JX121124|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-157:JX121124:1-861:861
CARD	Bla|SHV-157|JX121124|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|JX121124|0-861|ARO:3001196|SHV-157 [Klebsiella pneumoniae]
Lahey	Bla|SHV-157|JX121124|1-861|861|betalactams|Class_A_betalactamases|SHV	AFQ23963.1 JX121124.1:1-861
NCBI	Bla|SHV-157|JX121124|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|401871172|gb|JX121124.1|1-861
Resfinder	Bla|SHV-157|JX121124|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-157_1_JX121124
ARG-ANNOT	CARD|phgb|M20129|0-900|ARO:3001307|VgbA|MLS|Streptogramin_B_ester_bond_cleavage|VGBA	(MLS)VgbA:AF117258:2869-3768:900
CARD	CARD|phgb|M20129|0-900|ARO:3001307|VgbA|MLS|Streptogramin_B_ester_bond_cleavage|VGBA	@phgb|M20129|0-900|ARO:3001307|VgbA [Staphylococcus aureus]
NCBI	CARD|phgb|M20129|0-900|ARO:3001307|VgbA|MLS|Streptogramin_B_ester_bond_cleavage|VGBA	gi|695199377|ref|NG_035213.1|3768-2869 gi|153076|gb|M20129.1|STAPVGHG|641-1540 gi|398084|gb|L07778.1|STAVAT|1-252
Resfinder	CARD|phgb|M20129|0-900|ARO:3001307|VgbA|MLS|Streptogramin_B_ester_bond_cleavage|VGBA	vgb(A)_1_M20129
NCBI	Gly|VanA-D_1_AB242319|Glycopeptides|VanD-type_resistance_protein|VAND	gi|109240378|dbj|AB242319.1|4009-5040 gi|54114872|dbj|AB183866.1|72-1103
Resfinder	Gly|VanA-D_1_AB242319|Glycopeptides|VanD-type_resistance_protein|VAND	VanD_1_AB242319
CARD	Flq|QnrB13_1_EU273755|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EU273755|0-681|ARO:3002727|QnrB13 [Citrobacter freundii]
NCBI	Flq|QnrB13_1_EU273755|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|161579477|gb|EU273755.1|1-681
Resfinder	Flq|QnrB13_1_EU273755|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB13_1_EU273755
ARG-ANNOT	Flq|QnrB8|EU043312|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB8:EU043312:1-645:645
CARD	Flq|QnrB8|EU043312|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EU043312|0-645|ARO:3002722|QnrB8 [Citrobacter freundii]
NCBI	Flq|QnrB8|EU043312|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|169136798|gb|EU043312.2|1-645
Resfinder	Flq|QnrB8|EU043312|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB8_1_EU043312
NCBI	MLS|vatE_9_AY043210|MLS|Streptogramin_A_O-acetyltransferase|VATE	gi|15266475|gb|AY043210.1|1-645
Resfinder	MLS|vatE_9_AY043210|MLS|Streptogramin_A_O-acetyltransferase|VATE	vat(E)_9_AY043210
ARG-ANNOT	CARD|phgb|JX486113|0-795|ARO:3002668|rmtG|Aminoglycosides|16S_rRNA_methyltransferases|RMTG	(AGly)RmtG::JX486113:1-795:795
CARD	CARD|phgb|JX486113|0-795|ARO:3002668|rmtG|Aminoglycosides|16S_rRNA_methyltransferases|RMTG	@phgb|JX486113|0-795|ARO:3002668|rmtG [Klebsiella pneumoniae]
NCBI	CARD|phgb|JX486113|0-795|ARO:3002668|rmtG|Aminoglycosides|16S_rRNA_methyltransferases|RMTG	gi|641467908|gb|KJ004567.1|755-1549 gi|569555425|gb|CP004000.1|196343-197137 gi|444327362|gb|JX486113.1|1-795
Resfinder	CARD|phgb|JX486113|0-795|ARO:3002668|rmtG|Aminoglycosides|16S_rRNA_methyltransferases|RMTG	rmtG_1_KJ004567
NCBI	gi|870898370|gb|KT001101.1|Kpneumoniae39915|carbapenemaseKPCtype2|blaKPC-2|1|betalactams|Class_A_betalactamases|KPC	gi|873464424|gb|KR014106.1|9873-10838 gi|962148899|gb|KU176944.1|36826-37791 gi|961666360|gb|KT185451.1|86357-85392 gi|966624506|gb|CP012000.1|12143-13108 gi|966624404|gb|CP011999.1|28799-27834 gi|959190550|gb|CP013325.1|38384-37419 gi|941349957|gb|KP726894.1|3999-3034 gi|918463219|gb|KP987218.1|19767-18802 gi|918462945|gb|KP987215.1|6205-7170 gi|817046807|gb|KP893385.1|125849-124884
NCBI	1387|HM755942.1|HM755942|betalactams|Class_D_betalactamases|OXA	gi|308055643|gb|HM755942.1|1-691
ARG-ANNOT	Bla|CTX-M-97|HM776707|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-97:HM776707:1-876:876
Lahey	Bla|CTX-M-97|HM776707|1-876|876|betalactams|Class_A_betalactamases|CTX	ADM08178.1 HM776707.1:1-876
NCBI	Bla|CTX-M-97|HM776707|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|303297116|gb|HM776707.1|1-876
Resfinder	Bla|CTX-M-97|HM776707|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-97_1_HM776707
CARD	CARD|phgb|AF015087|435-1611|ARO:3002702|cmrA|Phenicol|Phenicol_efflux_pumps|CMRA	@phgb|AF015087|435-1611|ARO:3002702|cmrA [Rhodococcus rhodochrous]
NCBI	CARD|phgb|AF015087|435-1611|ARO:3002702|cmrA|Phenicol|Phenicol_efflux_pumps|CMRA	gi|15553438|gb|AF394894.1|AF394894|259-1435 gi|12580915|emb|AJ308376.1|2149-3325 gi|2460004|gb|AF015087.1|AF015087|436-1612
ARG-ANNOT	Bla|LEN-20|AM850910|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-20:AM850910:1-861:861
CARD	Bla|LEN-20|AM850910|1-861|861|betalactams|Class_A_betalactamases|LEN	@phgb|AM850910|0-861|ARO:3002467|LEN-20 [Klebsiella pneumoniae]
NCBI	Bla|LEN-20|AM850910|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|197724692|emb|AM850910.2|1-861
Resfinder	Bla|LEN-20|AM850910|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN20_1_AM850910
NCBI	Bla|blaL1_3_EF126059|betalactams|Class_B_betalactamases|L1	gi|134133872|gb|EF126059.1|1-870 gi|186911825|gb|EU441218.1|51-920
Resfinder	Bla|blaL1_3_EF126059|betalactams|Class_B_betalactamases|L1	blaL1_3_EF126059
CARD	gi|698174181|gb|KM087845.1|betalactams|Class_C_betalactamases|CMY	@phgb|KM087845|0-1146|ARO:3002130|CMY-119 [Citrobacter freundii]
Lahey	gi|698174181|gb|KM087845.1|betalactams|Class_C_betalactamases|CMY	AIT76098.1 KM087845.1:1-1146
NCBI	gi|698174181|gb|KM087845.1|betalactams|Class_C_betalactamases|CMY	gi|698174181|gb|KM087845.1|1-1146
ARG-ANNOT	Bla|OXY5-1|AJ871868|1-873|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY5-1:AJ871868:1-873:873
CARD	Bla|OXY5-1|AJ871868|1-873|873|betalactams|Class_A_betalactamases|OXY	@phgb|AJ871869|0-873|ARO:3002411|OXY-5-1 [Klebsiella oxytoca]
NCBI	Bla|OXY5-1|AJ871868|1-873|873|betalactams|Class_A_betalactamases|OXY	gi|60416702|emb|AJ871868.1|1-873
Resfinder	Bla|OXY5-1|AJ871868|1-873|873|betalactams|Class_A_betalactamases|OXY	blaOXY-5-1_1_AJ871868
CARD	MLS|ermC_15_U82607|MLS|23S_rRNA_methyltransferases|ERMC	@phgb|U82607|404-1139|ARO:3000250|ErmC [Staphylococcus chromogenes]
NCBI	MLS|ermC_15_U82607|MLS|23S_rRNA_methyltransferases|ERMC	gi|695198033|ref|NG_034884.1|405-1139 gi|353127779|gb|JF968533.1|150-197
Resfinder	MLS|ermC_15_U82607|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_15_U82607
NCBI	Tet|tetT_2_AY660530|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETT	gi|56155266|gb|AY660530.1|48-2003 gi|239829480|gb|FJ950716.1|1-114
Resfinder	Tet|tetT_2_AY660530|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETT	tet(T)_2_AY660530
ARG-ANNOT	Bla|VIM-4|JF905459|707-1507|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-4:JF905459:707-1507:801
CARD	Bla|VIM-4|JF905459|707-1507|801|betalactams|Class_B_betalactamases|VIM	@phgb|AM087411|127-928|ARO:3002274|VIM-4 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-4|JF905459|707-1507|801|betalactams|Class_B_betalactamases|VIM	AAN04257.1 AY135661.1:68-868
NCBI	Bla|VIM-4|JF905459|707-1507|801|betalactams|Class_B_betalactamases|VIM	gi|922665209|gb|KP892525.1|719-1519 gi|826570395|gb|KR262557.1|2370-3170 gi|825088496|gb|KP975075.1|8790-7990 gi|825088496|gb|KP975075.1|7975-7820 gi|825088250|gb|KP975074.1|106570-105770 gi|825088250|gb|KP975074.1|107484-106684 gi|636528809|gb|KJ551510.1|1187-1987 gi|584292460|gb|KF850517.1|669-1469 gi|584292460|gb|KF850517.1|1484-1639 gi|695226521|ref|NG_041529.1|754-1554 gi|402694763|gb|JX275775.1|1383-2183 gi|695225810|ref|NG_041423.1|84-884 gi|346720643|gb|JF915437.1|85-885 gi|346720643|gb|JF915437.1|900-1055
Resfinder	Bla|VIM-4|JF905459|707-1507|801|betalactams|Class_B_betalactamases|VIM	blaVIM-4_1_EU581706
Lahey	Bla|OXA-51_4_EU25595|betalactams|Class_D_betalactamases|OXA	ABX45065.1 EU255295.1:1-825
NCBI	Bla|OXA-51_4_EU25595|betalactams|Class_D_betalactamases|OXA	gi|564739229|gb|CP006768.1|2090392-2091216 gi|160623395|gb|EU255295.1|1-825
Resfinder	Bla|OXA-51_4_EU25595|betalactams|Class_D_betalactamases|OXA	blaOXA-51_4_EU255295
CARD	CARD|phgb|NC_003197|393892-397060|ARO:3000790|mdsB|Multi-drug_resistance|Multi-drug_efflux_pumps|MDSB	@phgb|NC_003197|393892-397060|ARO:3000790|mdsB [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	CARD|phgb|NC_003197|393892-397060|ARO:3000790|mdsB|Multi-drug_resistance|Multi-drug_efflux_pumps|MDSB	gi|981191958|emb|LN999997.1|4979376-4976208 gi|973795115|gb|AE006468.2|393894-397062 gi|928084184|gb|CP012681.1|436324-439492 gi|821161554|gb|CP011428.1|434318-437486 gi|808186398|gb|CP007523.1|1168228-1171396 gi|777177758|emb|LN829401.1|2521258-2518090 gi|764057510|gb|CP007235.1|1166848-1170016 gi|674281104|gb|CP009102.1|362286-365454 gi|669110799|gb|CP007804.2|394586-397754 gi|661245796|dbj|AP014565.1|434564-437732
ARG-ANNOT	Sul|SulII|EU360945|1617-2432|816|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	(Sul)SulII:EU360945:1617-2432:816
NCBI	Sul|SulII|EU360945|1617-2432|816|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|975007785|gb|CP010832.1|4504-3689 gi|954666075|gb|KT962845.1|19587-18772 gi|971494279|gb|CP010355.1|2154-2969 gi|971339514|gb|CP006662.2|54921-54106 gi|943457735|gb|KT818627.1|110623-109808 gi|969995276|gb|KT317085.1|2977-2162 gi|969868918|gb|CP013690.1|3395295-3396110 gi|959153704|gb|CP012993.1|20101-20916 gi|959147947|gb|CP012988.1|73119-72304 gi|954171665|gb|KT151664.1|77295-78110
Resfinder	Sul|SulII|EU360945|1617-2432|816|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_2_GQ421466
ARG-ANNOT	Tet|Tet-40|AM419751|14211-15431|1221|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	(Tet)Tet-40:AM419751:14211-15431:1221
NCBI	Tet|Tet-40|AM419751|14211-15431|1221|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	gi|133919907|emb|AM419751.1|14211-15431 gi|379125718|gb|JQ280445.2|3221-3296
Resfinder	Tet|Tet-40|AM419751|14211-15431|1221|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	tet(40)_3_AM419751
NCBI	Bla|CTX-M-22_3_EU376964|betalactams|Class_A_betalactamases|CTX	gi|166092025|gb|EU376964.1|1-876
Resfinder	Bla|CTX-M-22_3_EU376964|betalactams|Class_A_betalactamases|CTX	blaCTX-M-22_3_EU376964
NCBI	1017|JQ343850.1|JQ343850|betalactams|Class_A_betalactamases|CTX	gi|649725590|gb|KJ802489.1|1-876 gi|384406792|gb|JQ343850.1|1079-1954
ARG-ANNOT	Flq|qnrB18|AM919399|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)qnrB18:AM919399:37-681:645
CARD	Flq|qnrB18|AM919399|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|AM919399|0-681|ARO:3002733|QnrB18 [Citrobacter freundii]
NCBI	Flq|qnrB18|AM919399|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|161338643|emb|AM919399.1|1-681
Resfinder	Flq|qnrB18|AM919399|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB18_1_AM919399
CARD	CARD|phgb|FN396876|2406-3219|ARO:3000589|NDM-1|betalactams|Class_B_betalactamases|NDM	@phgb|FN396876|2406-3219|ARO:3000589|NDM-1 [Klebsiella pneumoniae]
NCBI	CARD|phgb|FN396876|2406-3219|ARO:3000589|NDM-1|betalactams|Class_B_betalactamases|NDM	gi|974752094|gb|KT164809.1|2123-1310 gi|974752068|gb|KT164808.1|9146-8333 gi|974570295|emb|LN997846.1|3255166-3255979 gi|971497891|gb|CP012901.1|4096717-4095904 gi|971497742|gb|CP012903.1|22986-22173 gi|971497538|gb|CP012902.1|63193-62380 gi|969535508|gb|KT364224.1|4051-3238 gi|969535508|gb|KT364224.1|813-1 gi|954665559|gb|KT879914.1|1871-1058 gi|944547580|gb|KR872634.1|853-40 gi|944547578|gb|KR872633.1|853-40
CARD	gi|698174163|gb|KM087836.1|betalactams|Class_C_betalactamases|CMY	@phgb|KM087836|0-1146|ARO:3002124|CMY-113 [Citrobacter freundii]
Lahey	gi|698174163|gb|KM087836.1|betalactams|Class_C_betalactamases|CMY	AIT76089.1 KM087836.1:1-1146
NCBI	gi|698174163|gb|KM087836.1|betalactams|Class_C_betalactamases|CMY	gi|698174163|gb|KM087836.1|1-1146
ARG-ANNOT	gi|10946526|gb|AY008290.1|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-11:AY008290:1-867:867
Lahey	gi|10946526|gb|AY008290.1|betalactams|Class_A_betalactamases|CARB	AAG23870.1 AY008290.1:1-867
NCBI	gi|10946526|gb|AY008290.1|betalactams|Class_A_betalactamases|CARB	gi|10946526|gb|AY008290.1|1-867
Resfinder	gi|10946526|gb|AY008290.1|betalactams|Class_A_betalactamases|CARB	blaCARB-11_1_AY008290
CARD	AGly|HM036080.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|HM036080|131-596|ARO:3000317|AAC(1) [Acinetobacter baumannii]
NCBI	AGly|HM036080.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|296245049|gb|HM036080.1|132-596
ARG-ANNOT	1249|AF409092.1|AF409092|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-7:AF409092:888-1754:867
CARD	1249|AF409092.1|AF409092|betalactams|Class_A_betalactamases|CARB	@phgb|AF409092|887-1754|ARO:3002246|CARB-7 [Vibrio cholerae non-O1/non-O139]
Lahey	1249|AF409092.1|AF409092|betalactams|Class_A_betalactamases|CARB	AAM74565.1 AF409092.1:888-1754
NCBI	1249|AF409092.1|AF409092|betalactams|Class_A_betalactamases|CARB	gi|21685579|gb|AF409092.1|888-1754
Resfinder	1249|AF409092.1|AF409092|betalactams|Class_A_betalactamases|CARB	blaCARB-7_1_AF409092
ARG-ANNOT	462|AY695112.1|AY695112|betalactams|Class_A_betalactamases|LUT	(Bla)Lut-1:AY695112:1-891:891
NCBI	462|AY695112.1|AY695112|betalactams|Class_A_betalactamases|LUT	gi|51832294|gb|AY695112.1|1-891
Resfinder	462|AY695112.1|AY695112|betalactams|Class_A_betalactamases|LUT	blaLUT-1_1_AY695112
NCBI	614|HQ875016.1|HQ875016|betalactams|Class_D_betalactamases|OXA	gi|937637492|gb|KT334335.1|98451-97525 gi|937637492|gb|KT334335.1|86339-86284 gi|928083869|gb|CP012682.1|75357-74431 gi|928083869|gb|CP012682.1|17933-17878 gi|828971497|gb|CP011644.1|25497-26423 gi|743008998|gb|CP010362.1|66711-65785 gi|742999823|gb|CP010396.1|9184-8258 gi|660582341|gb|CP008800.1|52403-53329 gi|587656709|gb|KF921569.1|531-1457 gi|587656699|gb|KF921568.1|531-1457 gi|587656689|gb|KF921567.1|531-1457 gi|587656679|gb|KF921566.1|531-1457
CARD	CARD|phgb|KP109680|1254-2112|ARO:3003720|SPG-1|betalactams|Class_B_betalactamases|SPG	@phgb|KP109680|1254-2112|ARO:3003720|SPG-1 [Sphingomonas sp. ALS-13]
NCBI	CARD|phgb|KP109680|1254-2112|ARO:3003720|SPG-1|betalactams|Class_B_betalactamases|SPG	gi|762020450|gb|KP109680.1|1255-2112
NCBI	gi|2443464|gb|U95364.1|STU95364|betalactams|Class_A_betalactamases|CTX	gi|397001530|gb|JX017309.1|6997-7948 gi|397001520|gb|JX017308.1|6998-7949 gi|397001506|gb|JX017307.1|11173-12124 gi|397001496|gb|JX017306.1|6220-7171 gi|10946250|gb|AF286192.1|981-1932 gi|2443464|gb|U95364.1|STU95364|1-952
ARG-ANNOT	Bla|TEM-168|FJ919776|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-168:FJ919776:209-1069:861
CARD	Bla|TEM-168|FJ919776|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|FJ919776|208-1069|ARO:3001034|TEM-168 [Escherichia coli]
Lahey	Bla|TEM-168|FJ919776|209-1069|861|betalactams|Class_A_betalactamases|TEM	ACR22829.1 FJ919776.1:209-1069
NCBI	Bla|TEM-168|FJ919776|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|237846382|gb|FJ919776.1|209-1069
Resfinder	Bla|TEM-168|FJ919776|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-168_1_FJ919776
ARG-ANNOT	Bla|BlaZ|AB245469|2235-3080|861|betalactams|Class_A_betalactamases|BLAZ	(Bla)BlaZ:AB245469:2235-3080:861
NCBI	Bla|BlaZ|AB245469|2235-3080|861|betalactams|Class_A_betalactamases|BLAZ	gi|974161314|gb|CP012018.1|2825343-2826188 gi|974158397|gb|CP012015.1|2824436-2825281 gi|974155539|gb|CP012013.1|2834462-2835307 gi|974152716|gb|CP012012.1|2813699-2814544 gi|974149849|gb|CP012011.1|2882586-2883431 gi|961586173|gb|CP013621.1|1051255-1052100 gi|937305921|gb|CP012756.1|2515134-2514289 gi|807232188|gb|CP011116.1|2481829-2480984 gi|703576232|gb|CP009554.1|1885851-1886696 gi|675300911|gb|CP007499.1|68486-67641
ARG-ANNOT	Bla|GOB-15|AY775547|1-879|879|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-15:AY775547:1-879:879
NCBI	Bla|GOB-15|AY775547|1-879|879|betalactams|Class_B_betalactamases|GOB	gi|55793098|gb|AY775547.1|1-879
Resfinder	Bla|GOB-15|AY775547|1-879|879|betalactams|Class_B_betalactamases|GOB	blaGOB-15_1_AY775547
NCBI	Met|nimI_1_FJ940887|Metronidazole|nim_nitroimidazole_reductase|NIMI	gi|238069272|gb|FJ940890.1|1-457 gi|238069266|gb|FJ940887.1|1-457
Resfinder	Met|nimI_1_FJ940887|Metronidazole|nim_nitroimidazole_reductase|NIMI	nimI_1_FJ940887
NCBI	Tet|tetM_12_FR671418|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|321157445|emb|FR671418.1|17031-18950 gi|220673408|emb|FM211187.1|1278602-1280521
Resfinder	Tet|tetM_12_FR671418|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_12_FR671418
ARG-ANNOT	Bla|IMP-15|AY553333|114-854|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-15:AY553333:114-854:741
CARD	Bla|IMP-15|AY553333|114-854|741|betalactams|Class_B_betalactamases|IMP	@phgb|AY553333|113-854|ARO:3002206|IMP-15 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-15|AY553333|114-854|741|betalactams|Class_B_betalactamases|IMP	AAT49070.1 AY553333.1:114-854
NCBI	Bla|IMP-15|AY553333|114-854|741|betalactams|Class_B_betalactamases|IMP	gi|921325517|dbj|LC075716.1|1301-2041 gi|462078722|gb|KC310496.1|1167-1907 gi|262065783|gb|GQ856542.1|534-1274 gi|262065777|gb|GQ856541.1|534-1274 gi|262065768|gb|GQ856540.1|1010-1750 gi|262065760|gb|GQ856539.1|1010-1750 gi|262065751|gb|GQ856538.1|1010-1750 gi|134035518|gb|EF184216.1|1010-1750 gi|62736340|gb|AY553333.1|114-854
Resfinder	Bla|IMP-15|AY553333|114-854|741|betalactams|Class_B_betalactamases|IMP	blaIMP-15_1_EF184216
ARG-ANNOT	939|U10186.1|ECU10186|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA8:U10186:711-1220:474
CARD	939|U10186.1|ECU10186|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|KJ174469|710-1220|ARO:3002863|dfrA8 [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	939|U10186.1|ECU10186|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|604633362|gb|KJ174469.1|711-1220 gi|516009|gb|U09273.1|SSU09273|704-1213 gi|507214|gb|U10186.1|ECU10186|711-1220
Resfinder	939|U10186.1|ECU10186|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA8_1_U10186
NCBI	Bla|AJ223604.1|gene3|betalactams|Class_B_betalactamases|IMP	gi|4210822|emb|AJ223604.1|1468-2346 gi|1435171|emb|X98393.1|1146-2024 gi|537705843|dbj|AB472901.2|1169-1197
CARD	145|JF769133.1|JF769133|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|CP003022|336788-337580|ARO:3003197|aadA25 [Pasteurella multocida 36950]
NCBI	145|JF769133.1|JF769133|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|356596244|gb|CP003022.1|336789-337580 gi|333975538|gb|JF769133.1|4393-5184
ARG-ANNOT	Bla|cfiA2|AB087226|1-750|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA2:AB087226:1-750:750
NCBI	Bla|cfiA2|AB087226|1-750|750|betalactams|Class_B_betalactamases|CFIA	gi|419590233|dbj|AB646744.1|2913-3662 gi|336317747|gb|JF795577.1|1848-2597 gi|52208023|emb|AJ831823.1|14-763 gi|22091057|dbj|AB087226.1|1-750
Resfinder	Bla|cfiA2|AB087226|1-750|750|betalactams|Class_B_betalactamases|CFIA	cfiA2_1_AB087226
ARG-ANNOT	Gly|VanRc3|AY033764|3846-4541|696|Glycopeptides|VanC-type_regulator|VANRC	(Gly)VanRc3:AY033764:3846-4541:696
NCBI	Gly|VanRc3|AY033764|3846-4541|696|Glycopeptides|VanC-type_regulator|VANRC	gi|18476137|gb|AY033764.1|3846-4541 gi|731482940|gb|CP010075.1|449484-449515 gi|675843208|gb|CP008855.1|1887492-1887464
NCBI	Bla|FJ919776.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|237846382|gb|FJ919776.1|139-1069
NCBI	1233|AY139598.1|AY139598|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|24209721|gb|AY139598.1|618-1406
NCBI	Sul|FN543093.2|gene431|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|323575285|emb|FN543093.2|449844-450728
CARD	Mdr|NC_002745.1123101|Multi-drug_resistance|MDR_regulator|MEPR	@phgb|NC_009782|379934-380354|ARO:3000746|mepR [Staphylococcus aureus subsp. aureus Mu3]
NCBI	Mdr|NC_002745.1123101|Multi-drug_resistance|MDR_regulator|MEPR	gi|984671414|emb|LT009690.1|355424-355843 gi|974697948|dbj|AP017320.1|379056-379475 gi|927048389|gb|CP010890.1|327183-327602 gi|925190036|gb|CP012593.1|367805-368224 gi|803444476|gb|CP011147.1|373417-373836 gi|781886788|dbj|AP014653.1|354554-354973 gi|781883823|dbj|AP014652.1|354554-354973 gi|760463627|gb|CP010940.1|259691-260110 gi|636561279|gb|CP007659.1|353759-354178 gi|595636499|gb|CP007454.1|789548-789129
ARG-ANNOT	Bla|SHV-32|AY037778|92-952|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-32:AY037778:92-952:861
CARD	Bla|SHV-32|AY037778|92-952|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY037778|91-952|ARO:3001090|SHV-32 [Klebsiella pneumoniae]
Lahey	Bla|SHV-32|AY037778|92-952|861|betalactams|Class_A_betalactamases|SHV	AAK69828.1 AY037778.1:92-952
NCBI	Bla|SHV-32|AY037778|92-952|861|betalactams|Class_A_betalactamases|SHV	gi|15721850|gb|AY037778.1|92-952
NCBI	gi|3004512|gb|U14749.1|PAU14749|betalactams|Class_A_betalactamases|CARB	gi|695198358|ref|NG_034961.1|1-1878 gi|62719421|gb|AY913771.1|1496-2556 gi|815968487|gb|CP011317.1|3717410-3717622 gi|815968487|gb|CP011317.1|3715763-3715964 gi|815968487|gb|CP011317.1|3715155-3715260 gi|815968487|gb|CP011317.1|3713637-3713738 gi|408362959|gb|JX448550.1|11231-11019 gi|408362959|gb|JX448550.1|12880-12677 gi|88911226|gb|DQ393781.1|2781-2962 gi|81345567|gb|DQ266447.1|2355-2417 gi|330885916|gb|HQ880250.1|2329-2357
NCBI	703|JF414726.1|JF414726|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	gi|425862449|gb|JX566708.1|1168-1701 gi|370318299|gb|JF414726.1|1160-1693 gi|317018024|gb|GU390404.1|1112-1645 gi|317018018|gb|GU390403.1|1142-1675 gi|317018003|gb|GU390401.1|1132-1665 gi|24209725|gb|AY139599.1|107-640 gi|26655445|gb|AF364344.1|126-659
NCBI	Bla|mecA_4_AB033763|betalactams|Penicillin_binding_protein|MECA	gi|955659783|emb|LN864705.1|5925-3919 gi|938149445|gb|KR936059.1|1-2007 gi|696158524|gb|KM281804.1|8026-6020 gi|675300911|gb|CP007499.1|43087-41081 gi|647513781|dbj|AB478934.1|6981-4975 gi|636561279|gb|CP007659.1|41741-39735 gi|556502764|emb|HG515014.1|13896-11890 gi|549124399|emb|HE984157.2|6196-8202 gi|545582967|gb|CP003604.1|42403-40397 gi|452754715|emb|HF569115.1|25607-23601
Resfinder	Bla|mecA_4_AB033763|betalactams|Penicillin_binding_protein|MECA	mecA_4_AB033763
ARG-ANNOT	gi|2467189|emb|Y13612.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-52:Y13612:1-861:861
CARD	gi|2467189|emb|Y13612.1|betalactams|Class_A_betalactamases|TEM	@phgb|Y13612|0-861|ARO:3000921|TEM-52 [Klebsiella pneumoniae]
Lahey	gi|2467189|emb|Y13612.1|betalactams|Class_A_betalactamases|TEM	CAA73933.1 Y13612.1:1-861
NCBI	gi|2467189|emb|Y13612.1|betalactams|Class_A_betalactamases|TEM	gi|2467189|emb|Y13612.1|1-861
ARG-ANNOT	Bla|SHV-84|AM087453|26-856|831|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-84:AM087453:26-856:831
CARD	Bla|SHV-84|AM087453|26-856|831|betalactams|Class_A_betalactamases|SHV	@phgb|AM087453|25-856|ARO:3001138|SHV-84 [Escherichia coli]
NCBI	Bla|SHV-84|AM087453|26-856|831|betalactams|Class_A_betalactamases|SHV	gi|157676815|emb|AM087453.1|26-856
ARG-ANNOT	Bla|CMY-37|AB280919|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-37:AB280919:1-1146:1146
CARD	Bla|CMY-37|AB280919|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AB280919|0-1146|ARO:3002048|CMY-37 [Citrobacter freundii]
Lahey	Bla|CMY-37|AB280919|1-1146|1146|betalactams|Class_C_betalactamases|CMY	BAF36388.1 AB280919.1:1-1146
NCBI	Bla|CMY-37|AB280919|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|117307232|dbj|AB280919.1|1-1146
Resfinder	Bla|CMY-37|AB280919|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-37_1_AB280919
NCBI	gi|300510843|gb|HM245381.1|betalactams|Class_B_betalactamases|IND	gi|300510843|gb|HM245381.1|1-878 gi|11095175|gb|AF219130.1|AF219130|1-732
ARG-ANNOT	Bla|TEM-85|AJ277414|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-85:AJ277414:1-861:861
CARD	Bla|TEM-85|AJ277414|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AJ277414|0-861|ARO:3000952|TEM-85 [Klebsiella pneumoniae]
Lahey	Bla|TEM-85|AJ277414|1-861|861|betalactams|Class_A_betalactamases|TEM	CAC43229.1 AJ277414.1:1-861
NCBI	Bla|TEM-85|AJ277414|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|695208059|ref|NG_035471.1|1-861
Resfinder	Bla|TEM-85|AJ277414|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-85_1_AJ277414
ARG-ANNOT	gi|193227725|emb|AM982521.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-77:AM982521:1912-2787:876
CARD	gi|193227725|emb|AM982521.1|betalactams|Class_A_betalactamases|CTX	@phgb|AM982521|1911-2787|ARO:3001938|CTX-M-77 [Kluyvera ascorbata]
Lahey	gi|193227725|emb|AM982521.1|betalactams|Class_A_betalactamases|CTX	CAQ42480.1 AM982521.1:1912-2787
NCBI	gi|193227725|emb|AM982521.1|betalactams|Class_A_betalactamases|CTX	gi|193227725|emb|AM982521.1|1912-2787
Resfinder	gi|193227725|emb|AM982521.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-77_1_AM982521
ARG-ANNOT	Bla|SHV-44|AY259119|117-977|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-44:AY259119:117-977:861
CARD	Bla|SHV-44|AY259119|117-977|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY259119|116-977|ARO:3001102|SHV-44 [Klebsiella pneumoniae]
Lahey	Bla|SHV-44|AY259119|117-977|861|betalactams|Class_A_betalactamases|SHV	AAP82228.1 AY259119.1:117-977
NCBI	Bla|SHV-44|AY259119|117-977|861|betalactams|Class_A_betalactamases|SHV	gi|32442314|gb|AY259119.1|117-977 gi|32815774|gb|AY326946.1|25-885
Resfinder	Bla|SHV-44|AY259119|117-977|861|betalactams|Class_A_betalactamases|SHV	blaSHV-44_1_AY259119
Lahey	Bla|KF986259.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30278.1 KF986259.1:841-17
NCBI	Bla|KF986259.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389153|gb|KF986259.1|841-17
NCBI	Bla|SHV-1_14_HM751099|betalactams|Class_A_betalactamases|SHV	gi|313766525|gb|HM751099.1|1-861
Resfinder	Bla|SHV-1_14_HM751099|betalactams|Class_A_betalactamases|SHV	blaSHV-1_14_HM751099
NCBI	Sul|sul2_6_FN995456|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|952556149|emb|LN879484.1|11950-11135 gi|690385522|gb|KM023773.1|15734-14919 gi|394343076|gb|CP003683.1|2037047-2036232 gi|695220958|ref|NG_039594.1|7577-6762 gi|145848882|emb|AM412236.1|98642-99457
Resfinder	Sul|sul2_6_FN995456|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_6_FN995456
Lahey	Bla|OXA-50_1_AY306135|betalactams|Class_D_betalactamases|OXA	AAQ76282.1 AY306135.1:1-789
NCBI	Bla|OXA-50_1_AY306135|betalactams|Class_D_betalactamases|OXA	gi|984361056|gb|CP008873.1|1442102-1441314 gi|974327848|gb|CP008866.1|3540443-3539655 gi|974319461|gb|CP008865.1|2710648-2711436 gi|971497891|gb|CP012901.1|60418-59630 gi|660504631|gb|CP008749.1|6207241-6208029 gi|576902775|gb|CP007147.1|895511-894723 gi|34591798|gb|AY306134.1|1-789
Resfinder	Bla|OXA-50_1_AY306135|betalactams|Class_D_betalactamases|OXA	blaOXA-50_1_AY306135
CARD	CARD|phgb|U00096|2368038-2370021|ARO:3002985|arnA|Cationic_antimicrobial_peptides|Lipid_A_modification|ARNA	@phgb|U00096|2368038-2370021|ARO:3002985|arnA [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|2368038-2370021|ARO:3002985|arnA|Cationic_antimicrobial_peptides|Lipid_A_modification|ARNA	gi|985000614|gb|CP014225.1|565239-567222 gi|958627747|gb|CP013253.1|1047503-1045520 gi|958612453|gb|CP013048.1|1876018-1874035 gi|939732440|gb|CP011343.2|2348497-2350480 gi|939731527|gb|CP011342.2|2349422-2351405 gi|937526251|gb|CP012870.1|2273617-2271634 gi|937521852|gb|CP012869.1|2273617-2271634 gi|937517453|gb|CP012868.1|2273617-2271634 gi|932857508|emb|LN877770.1|2732961-2734944 gi|923416119|gb|CP011113.1|2331676-2333659
NCBI	gi|17999556|gb|AY027870.1|betalactams|Class_A_betalactamases|VEB	gi|17999556|gb|AY027870.1|1-1081
NCBI	gi|14626421|gb|AY034848.1|betalactams|Class_C_betalactamases|FOX	gi|14626421|gb|AY034848.1|1-1200
ARG-ANNOT	1013|AB119105.1|AB119105|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)3Aac6-Iad:AB119105:1-435:435
CARD	1013|AB119105.1|AB119105|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AB119105|0-435|ARO:3002572|AAC(6')-Iad [Acinetobacter pittii]
NCBI	1013|AB119105.1|AB119105|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|44886070|dbj|AB119105.1|1-435
Resfinder	1013|AB119105.1|AB119105|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iad_1_AB119105
NCBI	1119|M55547.1|TRNTAAB|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|19698424|gb|AF479774.1|7975-8763 gi|155010|gb|M55547.1|TRNTAAB|1466-2254
ARG-ANNOT	gi|301344542|gb|HM565917.1|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-8:HM565917:1-1149:1149
CARD	gi|301344542|gb|HM565917.1|betalactams|Class_C_betalactamases|FOX	@phgb|HM565917|0-1149|ARO:3002161|FOX-8 [Escherichia coli]
Lahey	gi|301344542|gb|HM565917.1|betalactams|Class_C_betalactamases|FOX	ADK73994.1 HM565917.1:1-1149
NCBI	gi|301344542|gb|HM565917.1|betalactams|Class_C_betalactamases|FOX	gi|695224797|ref|NG_041149.1|1-1149
Resfinder	gi|301344542|gb|HM565917.1|betalactams|Class_C_betalactamases|FOX	blaFOX-8_1_HM565917
ARG-ANNOT	Bla|OXA-76|AY949203|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-76:AY949203:1-825:825
CARD	Bla|OXA-76|AY949203|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|AY949203|0-825|ARO:3001621|OXA-76 [Acinetobacter baumannii]
Lahey	Bla|OXA-76|AY949203|1-825|825|betalactams|Class_D_betalactamases|OXA	AAX51234.1 AY949203.1:1-825
NCBI	Bla|OXA-76|AY949203|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|61661223|gb|AY949203.1|1-825
Resfinder	Bla|OXA-76|AY949203|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-76_1_AY949203
ARG-ANNOT	gi|171705293|gb|EU419745.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-15:EU419745:1-801:801
CARD	gi|171705293|gb|EU419745.1|betalactams|Class_B_betalactamases|VIM	@phgb|EU419745|0-801|ARO:3002285|VIM-15 [Pseudomonas aeruginosa]
Lahey	gi|171705293|gb|EU419745.1|betalactams|Class_B_betalactamases|VIM	ACB54702.1 EU419745.1:1-801
NCBI	gi|171705293|gb|EU419745.1|betalactams|Class_B_betalactamases|VIM	gi|171705293|gb|EU419745.1|1-801
Resfinder	gi|171705293|gb|EU419745.1|betalactams|Class_B_betalactamases|VIM	blaVIM-15_1_EU419745
NCBI	Elf|NC_002745.1123311|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|984671414|emb|LT009690.1|577641-578825 gi|974697948|dbj|AP017320.1|585703-586887 gi|927048389|gb|CP010890.1|544331-545515 gi|925190036|gb|CP012593.1|597463-598647 gi|803444476|gb|CP011147.1|582508-583692 gi|595636499|gb|CP007454.1|575182-573998 gi|408436493|emb|HE579073.1|566878-568062 gi|408434508|emb|HE579071.1|566829-568013 gi|408432519|emb|HE579069.1|566851-568035 gi|408430526|emb|HE579067.1|566810-567994
ARG-ANNOT	gi|322719697|gb|HQ734813.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-202:HQ734813:1-825:825
CARD	gi|322719697|gb|HQ734813.1|betalactams|Class_D_betalactamases|OXA	@phgb|HQ734813|0-825|ARO:3001667|OXA-202 [Acinetobacter baumannii]
Lahey	gi|322719697|gb|HQ734813.1|betalactams|Class_D_betalactamases|OXA	ADX07747.1 HQ734813.1:1-825
NCBI	gi|322719697|gb|HQ734813.1|betalactams|Class_D_betalactamases|OXA	gi|322719697|gb|HQ734813.1|1-825
Resfinder	gi|322719697|gb|HQ734813.1|betalactams|Class_D_betalactamases|OXA	blaOXA-202_1_HQ734813
NCBI	Bla|SHV-1_10_EF035567|betalactams|Class_A_betalactamases|SHV	gi|124053922|gb|EF035567.1|1-861
Resfinder	Bla|SHV-1_10_EF035567|betalactams|Class_A_betalactamases|SHV	blaSHV-1_10_EF035567
CARD	Flq|QnrB56_1_JX259317|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JX259317|0-681|ARO:3002769|QnrB56 [Citrobacter freundii]
NCBI	Flq|QnrB56_1_JX259317|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|403495123|gb|JX259317.1|1-681
Resfinder	Flq|QnrB56_1_JX259317|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB56_1_JX259317
CARD	CARD|phgb|HM755448|244-1120|ARO:3001957|CTX-M-98|betalactams|Class_A_betalactamases|CTX	@phgb|HM755448|244-1120|ARO:3001957|CTX-M-98 [Escherichia coli]
NCBI	CARD|phgb|HM755448|244-1120|ARO:3001957|CTX-M-98|betalactams|Class_A_betalactamases|CTX	gi|512134475|gb|KF022000.1|23-899 gi|308198798|gb|HM755448.1|245-1121 gi|313510881|gb|HQ637575.1|1-876
NCBI	Gly|VanH-D_2_AF175293|Glycopeptides|VanD-type_resistance_protein|VANHD	gi|5759260|gb|AF175293.1|AF175293|3115-4086
Resfinder	Gly|VanH-D_2_AF175293|Glycopeptides|VanD-type_resistance_protein|VANHD	VanH-D_2_AF175293
NCBI	gi|374414413|gb|JN714478.1|betalactams|Class_C_betalactamases|CMY	gi|374414413|gb|JN714478.1|1035-2262
ARG-ANNOT	MLS|ErmO|M74717|40-822|783|MLS|23S_rRNA_methyltransferases|ERMO	(MLS)ErmO:M74717:40-822:783
CARD	MLS|ErmO|M74717|40-822|783|MLS|23S_rRNA_methyltransferases|ERMO	@phgb|M74717|39-822|ARO:3001303|ErmO [Streptomyces lividans]
NCBI	MLS|ErmO|M74717|40-822|783|MLS|23S_rRNA_methyltransferases|ERMO	gi|672367150|gb|CP009124.1|1767968-1767186 gi|153345|gb|M74717.1|STMLRMMGT|40-822
Resfinder	MLS|ErmO|M74717|40-822|783|MLS|23S_rRNA_methyltransferases|ERMO	erm(O)_1_M74717
NCBI	Flq|NC_010410.6003198|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|939559781|gb|CP012952.1|3863522-3861303 gi|169147133|emb|CU459141.1|3709146-3706927 gi|88758893|emb|CT025948.2|19-2238
CARD	Bla|KJ461948.1|gene1|betalactams|Class_A_betalactamases|CTX	@phgb|KJ461948|3-876|ARO:3002009|CTX-M-152 [Kluyvera sp. MRB7]
Lahey	Bla|KJ461948.1|gene1|betalactams|Class_A_betalactamases|CTX	AHY20039.1 KJ461948.1:4-876
NCBI	Bla|KJ461948.1|gene1|betalactams|Class_A_betalactamases|CTX	gi|620597417|gb|KJ461948.1|4-876
CARD	Bla|FJ666070.1|gene1|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666070|0-1194|ARO:3002506|PDC-7 [Pseudomonas aeruginosa]
Lahey	Bla|FJ666070.1|gene1|betalactams|Class_C_betalactamases|PDC	ACQ82812.1 FJ666070.1:1-1194
NCBI	Bla|FJ666070.1|gene1|betalactams|Class_C_betalactamases|PDC	gi|229597529|gb|FJ666070.1|1-1194
CARD	Bla|VEB-1_1_HM370393|betalactams|Class_A_betalactamases|VEB	@phgb|AF324833|0-900|ARO:3002378|VEB-9 [Pseudomonas aeruginosa];@phgb|AF324833.1|0-900|ARO:3003711|VEB-1a [Pseudomonas aeruginosa]
Lahey	Bla|VEB-1_1_HM370393|betalactams|Class_A_betalactamases|VEB	AAK14293.1 AF324833.1:1-900
NCBI	Bla|VEB-1_1_HM370393|betalactams|Class_A_betalactamases|VEB	gi|933685907|gb|KR827392.1|146528-145629 gi|933685695|gb|KR827391.1|174865-173966 gi|749800011|gb|KM506769.1|148267-147368 gi|695224365|ref|NG_041064.1|1704-2603 gi|695224360|ref|NG_041063.1|1158-2057 gi|317015096|gb|HM370391.1|1665-2564 gi|317015093|gb|HM370390.1|676-1575 gi|260618472|gb|FJ808975.1|404-1303 gi|85376207|gb|DQ315788.1|952-1851 gi|42563738|gb|AY444815.1|1155-2054
Resfinder	Bla|VEB-1_1_HM370393|betalactams|Class_A_betalactamases|VEB	blaVEB-1_1_HM370393
ARG-ANNOT	Bla|TEM-70|AF188199|215-1075|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-70:AF188199:215-1075:861
CARD	Bla|TEM-70|AF188199|215-1075|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF188199|214-1075|ARO:3000936|TEM-70 [Escherichia coli]
Lahey	Bla|TEM-70|AF188199|215-1075|861|betalactams|Class_A_betalactamases|TEM	AAF01046.1 AF188199.1:215-1075
NCBI	Bla|TEM-70|AF188199|215-1075|861|betalactams|Class_A_betalactamases|TEM	gi|6007798|gb|AF188199.1|AF188199|215-1075
Resfinder	Bla|TEM-70|AF188199|215-1075|861|betalactams|Class_A_betalactamases|TEM	blaTEM-70_1_AF188199
CARD	gi|698174195|gb|KM087852.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087852|0-1140|ARO:3002147|DHA-16 [Morganella morganii]
Lahey	gi|698174195|gb|KM087852.1|betalactams|Class_C_betalactamases|DHA	AIT76105.1 KM087852.1:1-1140
NCBI	gi|698174195|gb|KM087852.1|betalactams|Class_C_betalactamases|DHA	gi|698174195|gb|KM087852.1|1-1140
ARG-ANNOT	Bla|AmpC1_Ecoli|FN649414|2765051-2766355|1302|betalactams|Penicillin_binding_protein|PBP4B	(Bla)AmpC1_Ecoli:FN649414:2765051-2766355:1302
NCBI	Bla|AmpC1_Ecoli|FN649414|2765051-2766355|1302|betalactams|Penicillin_binding_protein|PBP4B	gi|985000614|gb|CP014225.1|745302-746606 gi|958627747|gb|CP013253.1|867569-866265 gi|939732440|gb|CP011343.2|2529821-2531125 gi|939731527|gb|CP011342.2|2530746-2532050 gi|937526251|gb|CP012870.1|2093554-2092250 gi|937521852|gb|CP012869.1|2093554-2092250 gi|937517453|gb|CP012868.1|2093554-2092250 gi|932857508|emb|LN877770.1|3371910-3373214 gi|923416119|gb|CP011113.1|2511739-2513043 gi|899729770|gb|CP012127.1|2529520-2530824
NCBI	MLS|ermX_3_U21300|MLS|23S_rRNA_methyltransferases|ERMX	gi|9945780|gb|AF024666.2|2969-2208 gi|695198883|ref|NG_035107.1|4849-5610
Resfinder	MLS|ermX_3_U21300|MLS|23S_rRNA_methyltransferases|ERMX	erm(X)_3_U21300
CARD	CARD|pvgb|AE016830|2790820-2791552|ARO:3003077|Enterococcus|Lipopeptides|Daptomycin-resistant_liaFSR|LIAFSR|RequiresSNPConfirmation	@pvgb|AE016830|2790820-2791552|ARO:3003077|Enterococcus faecium liaF mutant conferring daptomycin resistance [Enterococcus faecalis V583]
NCBI	CARD|pvgb|AE016830|2790820-2791552|ARO:3003077|Enterococcus|Lipopeptides|Daptomycin-resistant_liaFSR|LIAFSR|RequiresSNPConfirmation	gi|29350190|gb|AE016830.1|2790821-2791553
ARG-ANNOT	Bla|CTX-M-4|Y14156|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-4:Y14156:1-876:876
CARD	Bla|CTX-M-4|Y14156|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|Y14156|0-876|ARO:3001867|CTX-M-4 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	Bla|CTX-M-4|Y14156|1-876|876|betalactams|Class_A_betalactamases|CTX	CAA74573.1 Y14156.1:1-876
NCBI	Bla|CTX-M-4|Y14156|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|695198069|ref|NG_034895.1|1-876
Resfinder	Bla|CTX-M-4|Y14156|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-4_1_Y14156
CARD	Phe|AJ518835.1|gene6|Phenicol|Phenicol_efflux_pumps|FLOR	@phgb|AJ518835|4534-5749|ARO:3002705|floR [Escherichia coli]
NCBI	Phe|AJ518835.1|gene6|Phenicol|Phenicol_efflux_pumps|FLOR	gi|661245796|dbj|AP014565.1|1076986-1075772 gi|544345850|dbj|AB591424.1|15064-16278 gi|332144411|dbj|AB571791.1|94548-93334 gi|695209067|ref|NG_035718.1|4535-5749
NCBI	Flq|NC_002516.2.879741|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|5586548-5584284 gi|553895034|gb|CP006832.1|5574481-5572217 gi|553886202|gb|CP006831.1|5575566-5573302 gi|543879514|gb|CP006705.1|5354067-5351803 gi|110227054|gb|AE004091.2|5574486-5572222
CARD	CARD|pvgb|NC_002952|1419759-1422162|ARO:3003312|Staphylococcus|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	@pvgb|NC_002952|1419759-1422162|ARO:3003312|Staphylococcus aureus parC conferring resistance to fluoroquinolone [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	CARD|pvgb|NC_002952|1419759-1422162|ARO:3003312|Staphylococcus|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|49240382|emb|BX571856.1|1419760-1422163
ARG-ANNOT	Bla|CTX-M-31|AJ567482|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-31:AJ567482:1-876:876
CARD	Bla|CTX-M-31|AJ567482|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AJ567481|0-876|ARO:3001893|CTX-M-31 [Providencia sp. 4440]
Lahey	Bla|CTX-M-31|AJ567482|1-876|876|betalactams|Class_A_betalactamases|CTX	CAD99181.1 AJ567481.1:1-876
NCBI	Bla|CTX-M-31|AJ567482|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|32187778|emb|AJ567481.1|1-876
Resfinder	Bla|CTX-M-31|AJ567482|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-31_1_AJ567481
ARG-ANNOT	Bla|VIM-23|GQ242167|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-23:GQ242167:1-801:801
CARD	Bla|VIM-23|GQ242167|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|GQ242167|0-801|ARO:3002293|VIM-23 [Enterobacter cloacae]
Lahey	Bla|VIM-23|GQ242167|1-801|801|betalactams|Class_B_betalactamases|VIM	ACT33323.1 GQ242167.1:1-801
NCBI	Bla|VIM-23|GQ242167|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|253684194|gb|GQ242167.1|1-801
Resfinder	Bla|VIM-23|GQ242167|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-23_1_GQ242167
ARG-ANNOT	Bla|GES-1|HM370522|1-864|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-1:HM370522:1-864:864;(Bla)GES-7:HQ170511:644-1507:864
NCBI	Bla|GES-1|HM370522|1-864|864|betalactams|Class_A_betalactamases|GES	gi|982900359|gb|KT984195.1|2076-2939 gi|700369824|gb|KJ631731.1|1680-2543 gi|478437743|gb|KC469285.1|81-944 gi|374282195|gb|JN596279.1|2256-3119 gi|323709084|gb|HQ170511.1|644-1507 gi|294769317|gb|GU831563.1|1-864 gi|262234435|gb|FJ696404.1|1680-2543 gi|255039693|gb|GQ337064.1|1919-2782 gi|89515717|gb|DQ236170.1|594-1457 gi|695209197|ref|NG_035773.1|1207-2070
Resfinder	Bla|GES-1|HM370522|1-864|864|betalactams|Class_A_betalactamases|GES	blaGES-1_1_HQ170511
NCBI	gi|72199369|gb|DQ139328.1|betalactams|Class_C_betalactamases|CMY	gi|72199369|gb|DQ139328.1|161-1369
NCBI	Rif|NC_010611.6233925|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|974022331|gb|CP013924.1|3770894-3766806 gi|827403829|gb|CP010779.1|3743544-3739456 gi|803657307|gb|CP007535.2|719993-715905 gi|615556143|gb|CP007577.1|1876702-1872614 gi|586958174|gb|CP006963.1|348900-352988 gi|522344435|gb|CP003849.1|365056-369144 gi|522324570|gb|CP003846.1|369302-373390 gi|407899266|gb|CP003856.1|578307-582395 gi|385876581|gb|CP003500.1|3610658-3606570 gi|347591739|gb|CP001937.1|356255-360343
NCBI	gi|358009200|gb|JN227084.1|betalactams|Class_A_betalactamases|TEM	gi|358009200|gb|JN227084.1|1-1391 gi|358009200|gb|JN227084.1|100-19 gi|358009200|gb|JN227084.1|1390-1309 gi|961666360|gb|KT185451.1|87734-87690 gi|961666360|gb|KT185451.1|4506-4477 gi|961666360|gb|KT185451.1|86442-86413 gi|975048878|gb|CP013962.1|163827-163856 gi|973715451|gb|CP013836.1|133859-133830 gi|973705327|gb|CP013832.1|72159-72130 gi|943457735|gb|KT818627.1|21845-21816 gi|943457735|gb|KT818627.1|81788-81817 gi|943457735|gb|KT818627.1|143379-143408 gi|970338578|gb|KT725789.1|68997-68968 gi|970338460|gb|KT725788.1|68997-68968 gi|961494526|gb|KT282968.1|27451-27422 gi|959190550|gb|CP013325.1|33445-33416
NCBI	gi|21998650|emb|X54606.1|betalactams|Class_A_betalactamases|TEM	gi|403398703|gb|JX469833.1|62898-61824 gi|356472769|gb|HQ659758.1|7728-8802 gi|157277474|tpe|BN000925.1|6713-5639 gi|114703507|emb|AM261760.1|6713-5639 gi|109389586|gb|DQ388534.1|23927-25001 gi|53794349|gb|AY741093.1|50588-49514 gi|3859493|gb|AF080442.1|3728-4802 gi|21998650|emb|X54606.1|1-1075 gi|8117219|dbj|AB043582.1|7744-6670 gi|8117212|dbj|AB043581.1|7744-6670
ARG-ANNOT	Bla|SHV-27|FJ685656|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-27:FJ685656:1-861:861
CARD	Bla|SHV-27|FJ685656|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF293345|0-861|ARO:3001085|SHV-27 [Klebsiella pneumoniae]
Lahey	Bla|SHV-27|FJ685656|1-861|861|betalactams|Class_A_betalactamases|SHV	AAG01039.1 AF293345.1:1-861
NCBI	Bla|SHV-27|FJ685656|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|959148571|gb|CP012992.1|156968-157828 gi|959142797|gb|CP012987.1|165363-166223 gi|562889812|gb|KF585140.1|48-908 gi|9858193|gb|AF293345.1|AF293345|1-861
Resfinder	Bla|SHV-27|FJ685656|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-27_1_AF293345
ARG-ANNOT	Bla|TEM-188|JN211012|214-1074|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-188:JN211012:214-1074:861
CARD	Bla|TEM-188|JN211012|214-1074|861|betalactams|Class_A_betalactamases|TEM	@phgb|JN211012|213-1074|ARO:3001048|TEM-188 [Salmonella enterica]
Lahey	Bla|TEM-188|JN211012|214-1074|861|betalactams|Class_A_betalactamases|TEM	AEL17198.1 JN211012.1:214-1074
NCBI	Bla|TEM-188|JN211012|214-1074|861|betalactams|Class_A_betalactamases|TEM	gi|342219561|gb|JN211012.1|214-1074
Resfinder	Bla|TEM-188|JN211012|214-1074|861|betalactams|Class_A_betalactamases|TEM	blaTEM-188_1_JN211012
ARG-ANNOT	gi|37359439|gb|AY227054.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-85:AY227054:1-765:765
CARD	gi|37359439|gb|AY227054.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY227054|0-765|ARO:3001780|OXA-85 [Fusobacterium nucleatum]
NCBI	gi|37359439|gb|AY227054.1|betalactams|Class_D_betalactamases|OXA	gi|948570940|gb|CP013121.1|500971-501735 gi|37359439|gb|AY227054.1|1-765
Resfinder	gi|37359439|gb|AY227054.1|betalactams|Class_D_betalactamases|OXA	blaOXA-85_1_AY227054
ARG-ANNOT	AGly|Aac6-Is|AF031327|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Is:AF031327:1-441:441
CARD	AGly|Aac6-Is|AF031327|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF031327|0-441|ARO:3002562|AAC(6')-Is [Acinetobacter genomosp. 15]
NCBI	AGly|Aac6-Is|AF031327|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|2909806|gb|AF031327.1|1-441
Resfinder	AGly|Aac6-Is|AF031327|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Is_1_AF031327
NCBI	Flq|CP000034.1|gene3218|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|558570689|gb|CP006736.1|2931686-2933944 gi|81239530|gb|CP000034.1|2980057-2982315
ARG-ANNOT	gi|384382957|gb|JQ429324.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-124:JQ429324:1-876:876
CARD	gi|384382957|gb|JQ429324.1|betalactams|Class_A_betalactamases|CTX	@phgb|JQ429324|0-876|ARO:3001983|CTX-M-124 [Escherichia coli]
Lahey	gi|384382957|gb|JQ429324.1|betalactams|Class_A_betalactamases|CTX	AFH88134.1 JQ429324.1:1-876
NCBI	gi|384382957|gb|JQ429324.1|betalactams|Class_A_betalactamases|CTX	gi|18129348|emb|AJ427461.1|1-876 gi|9843776|emb|AJ272538.2|2978-3853
Resfinder	gi|384382957|gb|JQ429324.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-124_1_JQ429324
ARG-ANNOT	Bla|MIR-3|AY743435|14-1159|1146|betalactams|Class_C_betalactamases|MIR	(Bla)MIR-3:AY743435:14-1159:1146
CARD	Bla|MIR-3|AY743435|14-1159|1146|betalactams|Class_C_betalactamases|MIR	@phgb|AY743435|13-1159|ARO:3002169|MIR-3 [Enterobacter cloacae]
Lahey	Bla|MIR-3|AY743435|14-1159|1146|betalactams|Class_C_betalactamases|MIR	AAU95779.1 AY743435.1:14-1159
NCBI	Bla|MIR-3|AY743435|14-1159|1146|betalactams|Class_C_betalactamases|MIR	gi|666667509|gb|KJ949090.1|1-1146 gi|53854917|gb|AY743435.1|14-1159
Resfinder	Bla|MIR-3|AY743435|14-1159|1146|betalactams|Class_C_betalactamases|MIR	blaMIR-3_1_AY743435
ARG-ANNOT	Bla|TEM-8|X65252|176-1036|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-8:X65252:176-1036:861
CARD	Bla|TEM-8|X65252|176-1036|861|betalactams|Class_A_betalactamases|TEM	@phgb|X65252|175-1036|ARO:3000880|TEM-8 [Klebsiella pneumoniae]
Lahey	Bla|TEM-8|X65252|176-1036|861|betalactams|Class_A_betalactamases|TEM	CAA46344.1 X65252.1:176-1036
NCBI	Bla|TEM-8|X65252|176-1036|861|betalactams|Class_A_betalactamases|TEM	gi|296951|emb|X65252.1|176-1036
Resfinder	Bla|TEM-8|X65252|176-1036|861|betalactams|Class_A_betalactamases|TEM	blaTEM-8_1_X65252
ARG-ANNOT	gi|2765070|emb|Y10281.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-49:Y10281:1-861:861
CARD	gi|2765070|emb|Y10281.1|betalactams|Class_A_betalactamases|TEM	@phgb|Y10281|0-861|ARO:3000918|TEM-49 [Escherichia coli]
Lahey	gi|2765070|emb|Y10281.1|betalactams|Class_A_betalactamases|TEM	CAA71324.1 Y10281.1:1-861
NCBI	gi|2765070|emb|Y10281.1|betalactams|Class_A_betalactamases|TEM	gi|2765070|emb|Y10281.1|1-861
Resfinder	gi|2765070|emb|Y10281.1|betalactams|Class_A_betalactamases|TEM	blaTEM-49_1_Y10281
ARG-ANNOT	Bla|ACT-16|AB737978|1-1140|1140|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-16:AB737978:1-1140:1140
CARD	Bla|ACT-16|AB737978|1-1140|1140|betalactams|Class_C_betalactamases|ACT	@phgb|AB737978|0-1140|ARO:3001827|ACT-16 [Enterobacter cloacae]
NCBI	Bla|ACT-16|AB737978|1-1140|1140|betalactams|Class_C_betalactamases|ACT	gi|397174612|dbj|AB737978.1|1-1140
Resfinder	Bla|ACT-16|AB737978|1-1140|1140|betalactams|Class_C_betalactamases|ACT	blaACT-16_1_AB737978
CARD	CARD|phgb|AE004091.2|4116187-4119265|ARO:3003693|mexK|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXK	@phgb|AE004091.2|4116187-4119265|ARO:3003693|mexK [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|AE004091.2|4116187-4119265|ARO:3003693|mexK|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXK	gi|926451317|emb|LN871187.1|1399649-1396572 gi|553895034|gb|CP006832.1|4116183-4119260 gi|553886202|gb|CP006831.1|4116183-4119260 gi|543879514|gb|CP006705.1|3895771-3898848 gi|110227054|gb|AE004091.2|4116188-4119265
ARG-ANNOT	Bla|TEM-102|AY029354|3-833|831|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-102:AY029354:3-833:831
NCBI	Bla|TEM-102|AY029354|3-833|831|betalactams|Class_A_betalactamases|TEM	gi|13676301|gb|AY029354.1|3-833
NCBI	1235|EU358785.1|EU358785|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|700659332|gb|KJ541071.1|37250-36732 gi|700659309|gb|KJ541070.1|14876-14358 gi|700659271|gb|KJ541069.1|33363-32845 gi|700659241|gb|KJ541068.1|24984-24466 gi|166034465|gb|EU358785.1|122-640
CARD	gi|546237219|gb|KF297583.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF297583|0-822|ARO:3001541|OXA-354 [Acinetobacter calcoaceticus]
Lahey	gi|546237219|gb|KF297583.1|betalactams|Class_D_betalactamases|OXA	AGW83452.1 KF297583.1:1-822
NCBI	gi|546237219|gb|KF297583.1|betalactams|Class_D_betalactamases|OXA	gi|546237219|gb|KF297583.1|1-822
Resfinder	gi|546237219|gb|KF297583.1|betalactams|Class_D_betalactamases|OXA	blaOXA-354_1_KF297583
CARD	CARD|phgb|AE016830|2211932-2212277|ARO:3002916|vanV|Glycopeptides|VanB-type_accessory_protein|VANVB	@phgb|AE016830|2211932-2212277|ARO:3002916|vanV [Enterococcus faecalis V583]
NCBI	CARD|phgb|AE016830|2211932-2212277|ARO:3002916|vanV|Glycopeptides|VanB-type_accessory_protein|VANVB	gi|29350190|gb|AE016830.1|2211933-2212278 gi|1209525|gb|U35369.1|EFU35369|7033-6688
ARG-ANNOT	1652|AY920928.1|AY920928|betalactams|Class_A_betalactamases|GES	(Bla)GES-9:AY920928:2690-3553:864
CARD	1652|AY920928.1|AY920928|betalactams|Class_A_betalactamases|GES	@phgb|AY920928|2689-3553|ARO:3002338|GES-9 [Pseudomonas aeruginosa]
Lahey	1652|AY920928.1|AY920928|betalactams|Class_A_betalactamases|GES	AAY43207.1 AY920928.1:2690-3553
NCBI	1652|AY920928.1|AY920928|betalactams|Class_A_betalactamases|GES	gi|66269634|gb|AY920928.1|2690-3553
Resfinder	1652|AY920928.1|AY920928|betalactams|Class_A_betalactamases|GES	blaGES-9_1_AY920928
NCBI	Mdr|AP009048.1|gene3415|Multi-drug_resistance|MDR_regulator|CPXAR	gi|985000614|gb|CP014225.1|2302175-2300802 gi|939732440|gb|CP011343.2|4085734-4084361 gi|939731527|gb|CP011342.2|4086500-4085127 gi|937526251|gb|CP012870.1|536680-538053 gi|937521852|gb|CP012869.1|536680-538053 gi|937517453|gb|CP012868.1|536680-538053 gi|932857508|emb|LN877770.1|4927738-4926365 gi|923416119|gb|CP011113.1|4061702-4060329 gi|899729770|gb|CP012127.1|4079382-4078009 gi|899725419|gb|CP012126.1|4082217-4080844
NCBI	gi|15485218|emb|AJ308558.1|betalactams|Class_A_betalactamases|TEM	gi|15485218|emb|AJ308558.1|1-1042
NCBI	Flq|FN543093.2|gene1593|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation	gi|323575285|emb|FN543093.2|1634198-1633101
ARG-ANNOT	gi|114842971|gb|DQ909059.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-157:DQ909059:1-861:861
CARD	gi|114842971|gb|DQ909059.1|betalactams|Class_A_betalactamases|TEM	@phgb|DQ909059|0-861|ARO:3001023|TEM-157 [Enterobacter cloacae]
Lahey	gi|114842971|gb|DQ909059.1|betalactams|Class_A_betalactamases|TEM	ABI81768.1 DQ909059.1:1-861
NCBI	gi|114842971|gb|DQ909059.1|betalactams|Class_A_betalactamases|TEM	gi|114842971|gb|DQ909059.1|1-861
Resfinder	gi|114842971|gb|DQ909059.1|betalactams|Class_A_betalactamases|TEM	blaTEM-157_1_DQ909059
ARG-ANNOT	Bla|CMY-23|DQ438952|161-1306|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-23:DQ438952:161-1306:1146
CARD	Bla|CMY-23|DQ438952|161-1306|1146|betalactams|Class_C_betalactamases|CMY	@phgb|DQ463751|75-1221|ARO:3002034|CMY-23 [Salmonella enterica subsp. enterica serovar Senftenberg]
Lahey	Bla|CMY-23|DQ438952|161-1306|1146|betalactams|Class_C_betalactamases|CMY	ABF06441.1 DQ463751.1:76-1221
NCBI	Bla|CMY-23|DQ438952|161-1306|1146|betalactams|Class_C_betalactamases|CMY	gi|641682562|emb|HG941718.1|4940404-4941549 gi|93277247|gb|DQ463751.1|76-1221 gi|90568484|gb|DQ438952.1|161-1306
Resfinder	Bla|CMY-23|DQ438952|161-1306|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-23_1_DQ438952
ARG-ANNOT	Bla|GOB-12|AY647249|1-873|873|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-12:AY647249:1-873:873
NCBI	Bla|GOB-12|AY647249|1-873|873|betalactams|Class_B_betalactamases|GOB	gi|49798152|gb|AY647249.1|1-873
Resfinder	Bla|GOB-12|AY647249|1-873|873|betalactams|Class_B_betalactamases|GOB	blaGOB-12_1_AY647249
ARG-ANNOT	Bla|TEM-22|Y17583|214-1071|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-22:Y17583:214-1071:861
CARD	Bla|TEM-22|Y17583|214-1071|861|betalactams|Class_A_betalactamases|TEM	@phgb|Y17583|213-1071|ARO:3000893|TEM-22 [Klebsiella pneumoniae]
Lahey	Bla|TEM-22|Y17583|214-1071|861|betalactams|Class_A_betalactamases|TEM	CAA76795.1 Y17583.1:214-1071
NCBI	Bla|TEM-22|Y17583|214-1071|861|betalactams|Class_A_betalactamases|TEM	gi|3282027|emb|Y17583.1|214-1071
Resfinder	Bla|TEM-22|Y17583|214-1071|861|betalactams|Class_A_betalactamases|TEM	blaTEM-22_1_Y17583
NCBI	gi|591389159|gb|KF986262.1|betalactams|Class_D_betalactamases|OXA	gi|591389159|gb|KF986262.1|1-895
NCBI	Tet|tetL_8_X60828|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	gi|695196392|ref|NG_034404.1|168-1544
Resfinder	Tet|tetL_8_X60828|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	tet(L)_8_X60828
CARD	CARD|phgb|X59968|507-1686|ARO:3002690|cml|Phenicol|Phenicol_efflux_pumps|CML	@phgb|X59968|507-1686|ARO:3002690|cml [Streptomyces lividans 1326]
NCBI	CARD|phgb|X59968|507-1686|ARO:3002690|cml|Phenicol|Phenicol_efflux_pumps|CML	gi|672367150|gb|CP009124.1|209280-208101 gi|47159|emb|X59968.1|508-1687 gi|901895891|gb|CP011300.1|2054515-2054485
ARG-ANNOT	Bla|TEM-156|AM115459|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-156:AM115459:209-1069:861
CARD	Bla|TEM-156|AM115459|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AM941159|208-1069|ARO:3001022|TEM-156 [Proteus mirabilis]
Lahey	Bla|TEM-156|AM115459|209-1069|861|betalactams|Class_A_betalactamases|TEM	CAQ00120.1 AM941159.1:209-1069
NCBI	Bla|TEM-156|AM115459|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|223006550|emb|AM941159.1|209-1069
Resfinder	Bla|TEM-156|AM115459|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-156_1_AM941159
ARG-ANNOT	Bla|NDM-7|JX412225|1-813|813|betalactams|Class_B_betalactamases|NDM	(Bla)NDM-7:JX412225:1-813:813
CARD	Bla|NDM-7|JX412225|1-813|813|betalactams|Class_B_betalactamases|NDM	@phgb|JX262694|0-813|ARO:3002357|NDM-7 [Escherichia coli]
Lahey	Bla|NDM-7|JX412225|1-813|813|betalactams|Class_B_betalactamases|NDM	AFQ31613.1 JX262694.1:1-813
NCBI	Bla|NDM-7|JX412225|1-813|813|betalactams|Class_B_betalactamases|NDM	gi|959148293|gb|CP012990.1|17236-16424 gi|951216358|dbj|LC095463.1|1-813 gi|951216346|dbj|LC095457.1|1-813 gi|951216342|dbj|LC095455.1|1-813 gi|951216336|dbj|LC095452.1|1-813 gi|951216332|dbj|LC095450.1|1-813 gi|908399148|gb|KP772214.1|813-1 gi|848612259|gb|KP826708.1|1382-2194 gi|848612133|gb|KP826705.1|2582-3394 gi|808352501|gb|KP776609.1|43617-42805
Resfinder	Bla|NDM-7|JX412225|1-813|813|betalactams|Class_B_betalactamases|NDM	blaNDM-7_1_JX262694
NCBI	Gly|VanR-B_1_AF192329|Glycopeptides|VanB-type_regulator|VANRB	gi|695199646|ref|NG_035288.1|24047-24709
Resfinder	Gly|VanR-B_1_AF192329|Glycopeptides|VanB-type_regulator|VANRB	VanR-B_1_AF192329
CARD	CARD|phgb|NC_002695|4903561-4904935|ARO:3000830|cpxA|Multi-drug_resistance|MDR_regulator|CPXA	@phgb|NC_002695|4903561-4904935|ARO:3000830|cpxA [Escherichia coli O157:H7 str. Sakai]
NCBI	CARD|phgb|NC_002695|4903561-4904935|ARO:3000830|cpxA|Multi-drug_resistance|MDR_regulator|CPXA	gi|937297913|gb|CP012802.1|4775938-4777312 gi|734586714|gb|CP010304.1|4923215-4924589 gi|666001753|gb|CP008805.1|4958469-4959843 gi|386794017|gb|CP001925.1|4830314-4831688 gi|374356928|gb|CP003109.1|4699533-4700907 gi|290760697|gb|CP001846.1|4791204-4792578 gi|254590536|gb|CP001368.1|4962735-4964109 gi|209157093|gb|CP001164.1|5006675-5008049 gi|47118301|dbj|BA000007.2|4903562-4904936 gi|209752437|gb|EU891945.1|1374-1
ARG-ANNOT	AGly|Aac6-Iw|AF031331|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iw:AF031331:1-441:441
CARD	AGly|Aac6-Iw|AF031331|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF031331|0-441|ARO:3002567|AAC(6')-Iw [Acinetobacter sp. 640]
NCBI	AGly|Aac6-Iw|AF031331|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|2909814|gb|AF031331.1|1-441
Resfinder	AGly|Aac6-Iw|AF031331|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iw_1_AF031331
CARD	CARD|phgb|M16503|243-1143|ARO:3002823|ErmH|MLS|23S_rRNA_methyltransferases|ERMH	@phgb|M16503|243-1143|ARO:3002823|ErmH [Streptomyces thermotolerans]
NCBI	CARD|phgb|M16503|243-1143|ARO:3002823|ErmH|MLS|23S_rRNA_methyltransferases|ERMH	gi|940836382|gb|KR818745.1|9385-10285 gi|153199|gb|M16503.1|STMCARBG|244-1144 gi|506870|dbj|D31821.1|STMACYB|1-35
ARG-ANNOT	AGly|AadA11|AJ567827|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA11:AJ567827:1-792:792
CARD	AGly|AadA11|AJ567827|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AJ567827|0-792|ARO:3002611|aadA11 [Escherichia coli]
NCBI	AGly|AadA11|AJ567827|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|32400254|emb|AJ567827.1|1-792
CARD	CARD|phgb|470266717|8362-9142|ARO:3003687|APH3-PRIME-VI|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|470266717|8362-9142|ARO:3003687|APH(3')-VI [Pseudomonas aeruginosa]
NCBI	CARD|phgb|470266717|8362-9142|ARO:3003687|APH3-PRIME-VI|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|937297641|gb|CP012754.1|4558-5337 gi|926465506|gb|KP770032.1|4773-5552 gi|921052862|gb|KP347609.1|1787-2566 gi|873463406|gb|KT072713.1|6753-7532 gi|825091421|gb|KP900015.1|7011-7790 gi|822875113|gb|KP282692.1|255-1034 gi|822875102|gb|KP282691.1|255-1034 gi|760460086|gb|KJ802405.1|114407-115186 gi|678126661|gb|KJ802404.1|114405-115184 gi|765525406|gb|KM923969.1|7011-7790
NCBI	Flq|NC_003098.1.933198|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|25307955|gb|AE007317.1|1097931-1095463
CARD	CARD|pvgb|U00096|4277468-4277933|ARO:3003381|Escherichia|Multi-drug_resistance|MDR_regulator|SOXS|RequiresSNPConfirmation	@pvgb|U00096|4277468-4277933|ARO:3003381|Escherichia coli soxR mutants [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|pvgb|U00096|4277468-4277933|ARO:3003381|Escherichia|Multi-drug_resistance|MDR_regulator|SOXS|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|2474669-2475134 gi|984297099|gb|CP014197.1|4289989-4289524 gi|975048878|gb|CP013962.1|4385416-4385881 gi|958612453|gb|CP013048.1|4620184-4619719 gi|939732440|gb|CP011343.2|4258110-4258575 gi|939731527|gb|CP011342.2|4258999-4259464 gi|937526251|gb|CP012870.1|364186-363721 gi|937521852|gb|CP012869.1|364186-363721 gi|937517453|gb|CP012868.1|364186-363721 gi|932857508|emb|LN877770.1|77339-77804
NCBI	gi|591542927|gb|KJ207207.1|betalactams|Class_C_betalactamases|ACT	gi|591542927|gb|KJ207207.1|378-1625 gi|666667507|gb|KJ949089.1|1-1146
ARG-ANNOT	MLS|EreA|AY183453|2730-3950|1221|MLS|Macrolide_esterases|EREA	(MLS)EreA:AY183453:2730-3950:1221
NCBI	MLS|EreA|AY183453|2730-3950|1221|MLS|Macrolide_esterases|EREA	gi|952545745|dbj|LC095818.1|768-1988 gi|695209202|ref|NG_035774.1|2730-3950
ARG-ANNOT	Tet|tetY|AF070999|1680-2855|1176|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETY	(Tet)TetY:AF070999:1680-2855:1176
CARD	Tet|tetY|AF070999|1680-2855|1176|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETY	@phgb|AF070999|1679-2855|ARO:3000182|tetY [IncQ plasmid pIE1120]
NCBI	Tet|tetY|AF070999|1680-2855|1176|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETY	gi|971493847|gb|CP010351.1|36719-35544 gi|927041761|gb|KT325596.1|28075-26900 gi|699045582|tpg|BK008853.1|10742-11917 gi|146453394|gb|EF495198.1|12759-13934 gi|3309048|gb|AF070999.1|1680-2855 gi|29467420|dbj|AB089607.1|1-1176 gi|239829526|gb|FJ950717.1|1-134 gi|239829524|gb|FJ950715.1|115-1
Resfinder	Tet|tetY|AF070999|1680-2855|1176|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETY	tet(Y)_1_EF495198
ARG-ANNOT	Bla|CMY-34|EF394370|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-34:EF394370:1-1146:1146
CARD	Bla|CMY-34|EF394370|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|EF394370|0-1146|ARO:3002045|CMY-34 [Citrobacter freundii]
Lahey	Bla|CMY-34|EF394370|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ABN51006.1 EF394370.1:1-1146
NCBI	Bla|CMY-34|EF394370|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|125664036|gb|EF394370.1|1-1146
Resfinder	Bla|CMY-34|EF394370|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-34_1_EF394370
ARG-ANNOT	Bla|OXA-132|EU547447|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-132:EU547447:1-825:825
CARD	Bla|OXA-132|EU547447|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|EU547447|0-825|ARO:3001653|OXA-132 [Acinetobacter baumannii]
Lahey	Bla|OXA-132|EU547447|1-825|825|betalactams|Class_D_betalactamases|OXA	ACD84990.1 EU547447.1:1-825
NCBI	Bla|OXA-132|EU547447|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|189214267|gb|EU547447.1|1-825
Resfinder	Bla|OXA-132|EU547447|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-132_1_EU547447
CARD	Flq|QnrB71_1_KC580660|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC580660|0-645|ARO:3002783|QnrB71 [Citrobacter braakii]
NCBI	Flq|QnrB71_1_KC580660|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|496297331|gb|KC580660.1|1-645
Resfinder	Flq|QnrB71_1_KC580660|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB71_1_KC580660
CARD	gi|698174217|gb|KM087863.1|betalactams|Class_C_betalactamases|MIR	@phgb|KM087863|0-1146|ARO:3002177|MIR-12 [Enterobacter cloacae]
Lahey	gi|698174217|gb|KM087863.1|betalactams|Class_C_betalactamases|MIR	AIT76116.1 KM087863.1:1-1146
NCBI	gi|698174217|gb|KM087863.1|betalactams|Class_C_betalactamases|MIR	gi|698174217|gb|KM087863.1|1-1146
NCBI	Bla|CTX-M-15_70_FJ815277|betalactams|Class_A_betalactamases|CTX	gi|225579715|gb|FJ815277.1|1-876
Resfinder	Bla|CTX-M-15_70_FJ815277|betalactams|Class_A_betalactamases|CTX	blaCTX-M-15_70_FJ815277
NCBI	gi|48734421|gb|AY628175.1|betalactams|Class_A_betalactamases|TEM	gi|48734421|gb|AY628175.1|1-1071
NCBI	Fos|fosA_16_M85195|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|723224579|gb|CP009854.1|581859-582284 gi|682113157|gb|CP008905.1|580484-580909 gi|682108593|gb|CP008897.1|583304-583729 gi|226407490|gb|FJ829469.1|1901-2326 gi|154988|gb|M85195.1|TRNFOS|296-721
Resfinder	Fos|fosA_16_M85195|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_16_M85195
CARD	gi|767811084|gb|KP144324.1|betalactams|Class_D_betalactamases|OXA	@phgb|KP144324|0-822|ARO:3003162|OXA-435 [Acinetobacter baumannii]
Lahey	gi|767811084|gb|KP144324.1|betalactams|Class_D_betalactamases|OXA	AJT57878.1 KP144324.1:1-822
NCBI	gi|767811084|gb|KP144324.1|betalactams|Class_D_betalactamases|OXA	gi|767811084|gb|KP144324.1|1-822
NCBI	gi|160948440|emb|AM176550.2|betalactams|Class_A_betalactamases|SHV	gi|160948440|emb|AM176550.2|1-891
NCBI	Bla|OXA-13_1_AF043558|betalactams|Class_D_betalactamases|OXA	gi|4105144|gb|AF043558.1|AF043558|1-801
Resfinder	Bla|OXA-13_1_AF043558|betalactams|Class_D_betalactamases|OXA	blaOXA-13_1_AF043558
NCBI	Bla|X77455.1|gene1|betalactams|Class_C_betalactamases|FOX	gi|453214|emb|X77455.1|592-1849
NCBI	Met|NimI_1_FJ940886|Metronidazole|nim_nitroimidazole_reductase|NIMI	gi|238069264|gb|FJ940886.1|1-457
Resfinder	Met|NimI_1_FJ940886|Metronidazole|nim_nitroimidazole_reductase|NIMI	nimI_1_FJ940886
CARD	CARD|phgb|NC_002516.2|5606102-5606435|ARO:3000264|emrE|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRE	@phgb|NC_002516.2|5606102-5606435|ARO:3000264|emrE [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516.2|5606102-5606435|ARO:3000264|emrE|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRE	gi|975043142|gb|CP013989.1|5727618-5727950 gi|974282928|gb|CP008861.1|4549020-4548688 gi|968567191|gb|CP013680.1|1170082-1170414 gi|926451317|emb|LN871187.1|5618165-5618497 gi|589338112|gb|CP006985.1|5860736-5861068 gi|589332184|gb|CP006984.1|5845768-5846100 gi|589326231|gb|CP006983.1|5863686-5864018 gi|589320215|gb|CP006982.1|5928012-5928344 gi|589314341|gb|CP006981.1|5804597-5804929 gi|589308385|gb|CP006980.1|5880031-5880363
CARD	CARD|phgb|CP002508|1666756-1667653|ARO:3003072|Bacillus|MLS|Macrolide_phosphotransferases|MPH	@phgb|CP002508|1666756-1667653|ARO:3003072|Bacillus intrinsic mph [Bacillus thuringiensis serovar finitimus YBT-020]
NCBI	CARD|phgb|CP002508|1666756-1667653|ARO:3003072|Bacillus|MLS|Macrolide_phosphotransferases|MPH	gi|324323994|gb|CP002508.1|1666757-1667654
CARD	CARD|phgb|AP012279|2172316-2173201|ARO:3000856|BJP-1|betalactams|Class_B_betalactamases|BJP1	@phgb|AP012279|2172316-2173201|ARO:3000856|BJP-1 [Bradyrhizobium sp. S23321]
NCBI	CARD|phgb|AP012279|2172316-2173201|ARO:3000856|BJP-1|betalactams|Class_B_betalactamases|BJP1	gi|381356398|dbj|AP012279.1|2172317-2173202
ARG-ANNOT	Gly|VanSc4|EU151753|4599-5663|1065|Glycopeptides|VanC-type_regulator|VANSC	(Gly)VanSc4:EU151753:4599-5663:1065
NCBI	Gly|VanSc4|EU151753|4599-5663|1065|Glycopeptides|VanC-type_regulator|VANSC	gi|161779851|gb|EU151753.1|4599-5663
Resfinder	Gly|VanSc4|EU151753|4599-5663|1065|Glycopeptides|VanC-type_regulator|VANSC	VanS-C_4_EU151753
NCBI	Tet|tetB_4_AF326777|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	gi|981191958|emb|LN999997.1|2497385-2498590 gi|971520763|gb|CP008715.1|92038-93243 gi|953946047|emb|LN908249.1|1550466-1549261 gi|949881887|gb|CP012931.1|25030-26235 gi|917657445|gb|KR827684.1|38452-37247 gi|909636483|emb|LN850163.1|118331-117126 gi|857118485|gb|CP011223.1|1683038-1684243 gi|834763093|gb|CP006636.1|352526-351321 gi|828386350|gb|CP006635.1|154867-153662 gi|825091926|gb|KP789020.1|135877-134672
Resfinder	Tet|tetB_4_AF326777|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	tet(B)_4_AF326777
CARD	CARD|phgb|AB219523.1|1175-4286|ARO:3003705|mexN|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXN	@phgb|AB219523.1|1175-4286|ARO:3003705|mexN [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AB219523.1|1175-4286|ARO:3003705|mexN|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXN	gi|68533162|dbj|AB219523.1|1176-4286
ARG-ANNOT	1893|DQ143913.1|DQ143913|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-12:DQ143913:1775-2575:801
CARD	1893|DQ143913.1|DQ143913|betalactams|Class_B_betalactamases|VIM	@phgb|DQ143913|1774-2575|ARO:3002282|VIM-12 [Klebsiella pneumoniae]
Lahey	1893|DQ143913.1|DQ143913|betalactams|Class_B_betalactamases|VIM	AAZ73123.1 DQ143913.1:1775-2575
NCBI	1893|DQ143913.1|DQ143913|betalactams|Class_B_betalactamases|VIM	gi|72536051|gb|DQ143913.1|1775-2575
Resfinder	1893|DQ143913.1|DQ143913|betalactams|Class_B_betalactamases|VIM	blaVIM-12_1_DQ143913
ARG-ANNOT	Bla|B-7|AF189304|1-747|747|betalactams|Class_B_betalactamases|BLAB	(Bla)B-7:AF189304:1-747:747
NCBI	Bla|B-7|AF189304|1-747|747|betalactams|Class_B_betalactamases|BLAB	gi|9587067|gb|AF189304.1|AF189304|1-747
Resfinder	Bla|B-7|AF189304|1-747|747|betalactams|Class_B_betalactamases|BLAB	blaB-7_1_AF189304
NCBI	Flq|CP001581.1|gene3048|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|226840737|gb|CP001581.1|3145179-3142309
ARG-ANNOT	Flq|QnrA3|DQ058661|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	(Flq)QnrA3:DQ058661:1-657:657
CARD	Flq|QnrA3|DQ058661|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	@phgb|DQ058661|0-657|ARO:3002709|QnrA3 [Shewanella algae]
NCBI	Flq|QnrA3|DQ058661|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	gi|70609061|gb|DQ058661.1|1-657
Resfinder	Flq|QnrA3|DQ058661|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	QnrA3_1_DQ058661
ARG-ANNOT	AGly|AadA8b|AM040708|1174-1965|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA8b:AM040708:1174-1965:792
NCBI	AGly|AadA8b|AM040708|1174-1965|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|56681242|gb|AY852272.1|974-1765 gi|71273537|emb|AM040708.1|1174-1965
Resfinder	AGly|AadA8b|AM040708|1174-1965|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA8b_1_AM040708
ARG-ANNOT	Bla|SHV-81|AM176556|25-886|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-81:AM176556:26-886:861
CARD	Bla|SHV-81|AM176556|25-886|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176556|25-886|ARO:3001135|SHV-81 [Klebsiella pneumoniae]
Lahey	Bla|SHV-81|AM176556|25-886|861|betalactams|Class_A_betalactamases|SHV	CAJ47136.2 AM176556.2:26-886
NCBI	Bla|SHV-81|AM176556|25-886|861|betalactams|Class_A_betalactamases|SHV	gi|160948456|emb|AM176556.2|26-886
Resfinder	Bla|SHV-81|AM176556|25-886|861|betalactams|Class_A_betalactamases|SHV	blaSHV-81_1_AM176556
NCBI	Flq|CP002695.1|gene952|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|973420427|gb|CP010966.1|963451-966132 gi|973416827|gb|CP010965.1|3093143-3090462 gi|937412521|gb|CP011401.1|3086413-3083732 gi|937409066|gb|CP011400.1|679881-682562 gi|937404317|gb|CP011448.1|964495-967176 gi|937400854|gb|CP011447.1|964504-967185 gi|937393878|gb|CP011446.1|963451-966132 gi|937390412|gb|CP011445.1|962402-965083 gi|937386949|gb|CP011444.1|963453-966134 gi|937383491|gb|CP011443.1|3092107-3089426
CARD	gi|546237207|gb|KF297577.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF297577|0-822|ARO:3001535|OXA-348 [Acinetobacter calcoaceticus]
Lahey	gi|546237207|gb|KF297577.1|betalactams|Class_D_betalactamases|OXA	AGW83446.1 KF297577.1:1-822
NCBI	gi|546237207|gb|KF297577.1|betalactams|Class_D_betalactamases|OXA	gi|546237207|gb|KF297577.1|1-822
Resfinder	gi|546237207|gb|KF297577.1|betalactams|Class_D_betalactamases|OXA	blaOXA-348_1_KF297577
CARD	CARD|phgb|EU408348|1243-2152|ARO:3002510|LRA-3|betalactams|Class_B_betalactamases|LRA	@phgb|EU408348|1243-2152|ARO:3002510|LRA-3 [uncultured bacterium BLR3]
NCBI	CARD|phgb|EU408348|1243-2152|ARO:3002510|LRA-3|betalactams|Class_B_betalactamases|LRA	gi|169647633|gb|EU408348.1|1244-2153
NCBI	Bla|SHV-5_1_AF096930|betalactams|Class_A_betalactamases|SHV	gi|3769674|gb|AF096930.1|1436-2296 gi|2113860|emb|X98104.1|74-934
Resfinder	Bla|SHV-5_1_AF096930|betalactams|Class_A_betalactamases|SHV	blaSHV-5_1_AF096930
NCBI	Bla|SHV-1_4_GQ407127|betalactams|Class_A_betalactamases|SHV	gi|257043771|gb|GQ407127.1|1-861
Resfinder	Bla|SHV-1_4_GQ407127|betalactams|Class_A_betalactamases|SHV	blaSHV-1_4_GQ407127
CARD	CARD|pvgb|AL123456|2288680-2289241|ARO:3003394|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Pyrazinamide-resistant_pncA|PNCA|RequiresSNPConfirmation	@pvgb|AL123456|2288680-2289241|ARO:3003394|Mycobacterium tuberculosis pncA mutations conferring resistance to pyrazinamide [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|2288680-2289241|ARO:3003394|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Pyrazinamide-resistant_pncA|PNCA|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|2310547-2311108 gi|984989958|gb|CP010339.1|2291685-2292246 gi|984985728|gb|CP010338.1|2290537-2291098 gi|984981517|gb|CP010337.1|2299346-2299907 gi|984972452|gb|CP010335.1|2615595-2615034 gi|984967653|gb|CP010334.1|2279720-2280281 gi|984963331|gb|CP010333.1|2286594-2287155 gi|984950177|gb|CP010330.1|2295638-2296199 gi|984945858|gb|CP010329.1|2288733-2289294 gi|755917060|gb|CP007299.1|2284210-2284771
CARD	Fos|fosB_3_HQ219726|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	@phgb|HQ219726|385-805|ARO:3002873|FosB3 [Enterococcus faecium]
NCBI	Fos|fosB_3_HQ219726|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	gi|695226492|ref|NG_041525.1|7668-7249 gi|323541192|gb|HQ219726.1|386-805
Resfinder	Fos|fosB_3_HQ219726|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	fosB_3_HQ219726
CARD	gi|256862201|gb|GQ390808.1|betalactams|Class_A_betalactamases|SHV	@phgb|GQ390808|0-813|ARO:3001173|SHV-126 [Escherichia coli]
NCBI	gi|256862201|gb|GQ390808.1|betalactams|Class_A_betalactamases|SHV	gi|256862201|gb|GQ390808.1|1-813
NCBI	Sul|AP009048.1|gene3222|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|1522111-1521263 gi|958627747|gb|CP013253.1|98657-99505 gi|939732440|gb|CP011343.2|3299869-3299021 gi|939731527|gb|CP011342.2|3300614-3299766 gi|937526251|gb|CP012870.1|1316745-1317593 gi|937521852|gb|CP012869.1|1316745-1317593 gi|937517453|gb|CP012868.1|1316745-1317593 gi|932857508|emb|LN877770.1|4149235-4148387 gi|923416119|gb|CP011113.1|3281628-3280780 gi|899729770|gb|CP012127.1|3299356-3298508
ARG-ANNOT	Bla|CTX-M-37|AY649755|18-893|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-37:AY649755:18-893-876
NCBI	Bla|CTX-M-37|AY649755|18-893|876|betalactams|Class_A_betalactamases|CTX	gi|532235082|gb|AY649755.2|1641-2515 gi|309951209|emb|FN813246.1|4408-5282
ARG-ANNOT	Bla|SHV-26|AF227204|74-934|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-26:AF227204:74-934:861
CARD	Bla|SHV-26|AF227204|74-934|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF227204|73-934|ARO:3001084|SHV-26 [Klebsiella pneumoniae]
Lahey	Bla|SHV-26|AF227204|74-934|861|betalactams|Class_A_betalactamases|SHV	AAF36719.1 AF227204.1:74-934
NCBI	Bla|SHV-26|AF227204|74-934|861|betalactams|Class_A_betalactamases|SHV	gi|640850664|gb|CP007731.1|2546141-2545281 gi|562889810|gb|KF585139.1|48-908 gi|7109288|gb|AF227204.1|AF227204|74-934
Resfinder	Bla|SHV-26|AF227204|74-934|861|betalactams|Class_A_betalactamases|SHV	blaSHV-26_1_AF227204
ARG-ANNOT	gi|300825673|gb|HM488988.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-167:HM488988::1-822:822
CARD	gi|300825673|gb|HM488988.1|betalactams|Class_D_betalactamases|OXA	@phgb|HM488988|0-822|ARO:3001467|OXA-167 [Acinetobacter baumannii]
Lahey	gi|300825673|gb|HM488988.1|betalactams|Class_D_betalactamases|OXA	ADK35871.1 HM488988.1:1-822
NCBI	gi|300825673|gb|HM488988.1|betalactams|Class_D_betalactamases|OXA	gi|300825673|gb|HM488988.1|1-822
Resfinder	gi|300825673|gb|HM488988.1|betalactams|Class_D_betalactamases|OXA	blaOXA-167_1_HM488988
NCBI	Gly|VanR-C_3_EU151752|Glycopeptides|VanC-type_regulator|VANRC	gi|161779845|gb|EU151752.1|3849-4544
Resfinder	Gly|VanR-C_3_EU151752|Glycopeptides|VanC-type_regulator|VANRC	VanR-C_3_EU151752
CARD	Phe|AJ312056.2|gene1|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|AJ312056|385-1036|ARO:3002670|cat [Staphylococcus aureus]
NCBI	Phe|AJ312056.2|gene1|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|695208635|ref|NG_035629.1|386-1036
CARD	gi|728797465|emb|LN515535.1|betalactams|Class_C_betalactamases|MIR	@phgb|LN515535|0-1146|ARO:3003173|MIR-17 [Enterobacter cloacae]
Lahey	gi|728797465|emb|LN515535.1|betalactams|Class_C_betalactamases|MIR	CEA29752.1 LN515535.1:1-1146
NCBI	gi|728797465|emb|LN515535.1|betalactams|Class_C_betalactamases|MIR	gi|728797465|emb|LN515535.1|1-1146
ARG-ANNOT	gi|380035723|dbj|AB703103.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-126:AB703103:1-876:876
CARD	gi|380035723|dbj|AB703103.1|betalactams|Class_A_betalactamases|CTX	@phgb|AB703103|0-876|ARO:3001985|CTX-M-126 [Escherichia coli]
Lahey	gi|380035723|dbj|AB703103.1|betalactams|Class_A_betalactamases|CTX	BAL72196.1 AB703103.1:1-876
NCBI	gi|380035723|dbj|AB703103.1|betalactams|Class_A_betalactamases|CTX	gi|380035723|dbj|AB703103.1|1-876
Resfinder	gi|380035723|dbj|AB703103.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-126_1_AB703103
ARG-ANNOT	651|X01385.1|X01385|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac)-IVa:X01385:244-1029:786
CARD	651|X01385.1|X01385|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|X01385|0-786|ARO:3002539|AAC(3)-IVa [Escherichia coli]
NCBI	651|X01385.1|X01385|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|430768287|gb|KC149513.1|1235-450 gi|222142705|gb|FJ032247.1|791-1576 gi|222142693|gb|FJ015153.1|2561-3346 gi|194686590|dbj|AB257725.1|2919-2134 gi|110348072|gb|DQ823234.1|1958-2743 gi|93352341|emb|AM238629.1|1461-676 gi|93352339|emb|AM238628.1|1461-676 gi|93352337|emb|AM238627.1|1461-676 gi|93352329|emb|AM238623.1|681-1466 gi|93352327|emb|AM238622.1|681-1466
Resfinder	651|X01385.1|X01385|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	aac(3)-IVa_1_X01385
CARD	Flq|KF730651.1|gene1|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	@phgb|KF730651|0-657|ARO:3002796|QnrS7 [Escherichia coli]
NCBI	Flq|KF730651.1|gene1|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|569533078|gb|KF730651.1|1-657
ARG-ANNOT	Flq|QnrB26|HQ386846|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB26:HQ386846:1-645:645
CARD	Flq|QnrB26|HQ386846|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HQ386846|0-681|ARO:3002741|QnrB26 [Proteus vulgaris]
NCBI	Flq|QnrB26|HQ386846|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|335892908|gb|HQ386846.1|1-681
ARG-ANNOT	Bla|CTX-M-6|AJ005045|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-6:AJ005045:1-876:876;(Bla)CTX-M-7:AJ005045:1-876:976
CARD	Bla|CTX-M-6|AJ005045|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AJ005045|0-876|ARO:3001870|CTX-M-7 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	Bla|CTX-M-6|AJ005045|1-876|876|betalactams|Class_A_betalactamases|CTX	CAA06312.1 AJ005045.1:1-876
NCBI	Bla|CTX-M-6|AJ005045|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|695198364|ref|NG_034963.1|1-876
Resfinder	Bla|CTX-M-6|AJ005045|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-5_8_AJ005045
ARG-ANNOT	492|AF234999.1|AF234999|betalactams|Class_A_betalactamases|BES	(Bla)BES-1:AF234999:190-1068:879
NCBI	492|AF234999.1|AF234999|betalactams|Class_A_betalactamases|BES	gi|374351474|gb|JF785550.1|10278-9400 gi|695199485|ref|NG_035230.1|190-1068
Resfinder	492|AF234999.1|AF234999|betalactams|Class_A_betalactamases|BES	blaBES-1_1_AF234999
ARG-ANNOT	Bla|TEM-135|JQ060998|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-135:JQ060998:1-861:861
NCBI	Bla|TEM-135|JQ060998|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|545693919|gb|KF268358.1|1399-2259 gi|373000255|gb|JQ060998.1|1-861
ARG-ANNOT	Bla|CTX-M-114|GQ351346|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-114:GQ351346:1-876:876
CARD	Bla|CTX-M-114|GQ351346|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|GQ351346|0-876|ARO:3001974|CTX-M-114 [Providencia rettgeri]
Lahey	Bla|CTX-M-114|GQ351346|1-876|876|betalactams|Class_A_betalactamases|CTX	ACU00153.1 GQ351346.1:1-876
NCBI	Bla|CTX-M-114|GQ351346|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|255046261|gb|GQ351346.1|1-876
Resfinder	Bla|CTX-M-114|GQ351346|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-114_1_GQ351346
ARG-ANNOT	gi|441494185|gb|JX982634.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-35:JX982634:1-801:801
CARD	gi|441494185|gb|JX982634.1|betalactams|Class_B_betalactamases|VIM	@phgb|JX982634|0-801|ARO:3002305|VIM-35 [Klebsiella oxytoca]
Lahey	gi|441494185|gb|JX982634.1|betalactams|Class_B_betalactamases|VIM	AGC50805.1 JX982634.1:1-801
NCBI	gi|441494185|gb|JX982634.1|betalactams|Class_B_betalactamases|VIM	gi|441494185|gb|JX982634.1|1-801
Resfinder	gi|441494185|gb|JX982634.1|betalactams|Class_B_betalactamases|VIM	blaVIM-35_1_JX982634
ARG-ANNOT	Bla|SHV-34|AY036620|89-949|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-34:AY036620:89-949:861
CARD	Bla|SHV-34|AY036620|89-949|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY036620|88-949|ARO:3001092|SHV-34 [Escherichia coli]
Lahey	Bla|SHV-34|AY036620|89-949|861|betalactams|Class_A_betalactamases|SHV	AAK64187.1 AY036620.1:89-949
NCBI	Bla|SHV-34|AY036620|89-949|861|betalactams|Class_A_betalactamases|SHV	gi|14532426|gb|AY036620.1|89-949 gi|14532426|gb|AY036620.1|53-88
Resfinder	Bla|SHV-34|AY036620|89-949|861|betalactams|Class_A_betalactamases|SHV	blaSHV-34_1_AY036620
CARD	CARD|phgb|U35369|6004-6613|ARO:3002950|vanXB|Glycopeptides|VanB-type_resistance_protein|VANXB	@phgb|U35369|6004-6613|ARO:3002950|vanXB [Enterococcus faecalis]
NCBI	CARD|phgb|U35369|6004-6613|ARO:3002950|vanXB|Glycopeptides|VanB-type_resistance_protein|VANXB	gi|1209525|gb|U35369.1|EFU35369|6005-6613
ARG-ANNOT	Bla|OKP-B-19|AM850921|25-885|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-19:AM850921:25-885:861
CARD	Bla|OKP-B-19|AM850921|25-885|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM850921|24-885|ARO:3002452|OKP-B-19 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-19|AM850921|25-885|861|betalactams|Class_A_betalactamases|OKP	gi|197724675|emb|AM850921.2|25-885
Resfinder	Bla|OKP-B-19|AM850921|25-885|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-19_1_AM850921
NCBI	1390|EU348758.1|EU348758|MLS|23S_rRNA_methyltransferases|ERMA	gi|164653710|gb|EU348757.1|1-594
Resfinder	1390|EU348758.1|EU348758|MLS|23S_rRNA_methyltransferases|ERMA	erm(A)_3_EU348758
CARD	Bla|CTX-M-103_1_HG423149|betalactams|Class_A_betalactamases|CTX	@phgb|HG423149|39-915|ARO:3001962|CTX-M-103 [Escherichia coli]
Lahey	Bla|CTX-M-103_1_HG423149|betalactams|Class_A_betalactamases|CTX	CDG50843.1 HG423149.1:40-915
NCBI	Bla|CTX-M-103_1_HG423149|betalactams|Class_A_betalactamases|CTX	gi|530776686|emb|HG423149.1|40-915
Resfinder	Bla|CTX-M-103_1_HG423149|betalactams|Class_A_betalactamases|CTX	blaCTX-M-103_1_HG423149
NCBI	gi|145975406|gb|EF534736.1|betalactams|Class_A_betalactamases|TEM	gi|145975406|gb|EF534736.1|1-1074 gi|961666360|gb|KT185451.1|87739-87690
ARG-ANNOT	Bla|CTX-M-85|FJ214368|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-85:FJ214368:1-876:876
CARD	Bla|CTX-M-85|FJ214368|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|FJ214368|0-876|ARO:3002495|CTX-M-85 [Salmonella enterica subsp. enterica serovar Albany]
Lahey	Bla|CTX-M-85|FJ214368|1-876|876|betalactams|Class_A_betalactamases|CTX	ACI29347.1 FJ214368.1:1-876
NCBI	Bla|CTX-M-85|FJ214368|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|208503062|gb|FJ214368.1|1-876
Resfinder	Bla|CTX-M-85|FJ214368|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-85_1_FJ214368
CARD	CARD|phgb|NC_007779|567537-567870|ARO:3000264|emrE|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRE	@phgb|NC_007779|567537-567870|ARO:3000264|emrE [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|NC_007779|567537-567870|ARO:3000264|emrE|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRE	gi|985000614|gb|CP014225.1|3407056-3407389 gi|939732440|gb|CP011343.2|566668-567001 gi|939731527|gb|CP011342.2|567104-567437 gi|937526251|gb|CP012870.1|4073360-4073027 gi|937521852|gb|CP012869.1|4073361-4073028 gi|937517453|gb|CP012868.1|4073350-4073017 gi|932857508|emb|LN877770.1|947444-947777 gi|923416119|gb|CP011113.1|555101-555434 gi|857137982|gb|CP011495.1|1774588-1774921 gi|817589947|gb|CP011324.1|562001-562334
NCBI	977|DQ018711.1|DQ018711|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|66731642|gb|DQ018711.1|5166-5750
Resfinder	977|DQ018711.1|DQ018711|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-Pt_5_DQ018711
ARG-ANNOT	Bla|OXY6-4|AJ871877|1-873|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY6-4:AJ871877:1-873:873
CARD	Bla|OXY6-4|AJ871877|1-873|873|betalactams|Class_A_betalactamases|OXY	@phgb|AJ871877|0-876|ARO:3002416|OXY-6-4 [Klebsiella oxytoca]
NCBI	Bla|OXY6-4|AJ871877|1-873|873|betalactams|Class_A_betalactamases|OXY	gi|60416720|emb|AJ871877.1|1-876
Resfinder	Bla|OXY6-4|AJ871877|1-873|873|betalactams|Class_A_betalactamases|OXY	blaOXY-6-4_4_AJ871877
ARG-ANNOT	gi|125658589|gb|EF373973.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-97:EF373973:1-861:861
CARD	gi|125658589|gb|EF373973.1|betalactams|Class_A_betalactamases|SHV	@phgb|EF373973|0-861|ARO:3001149|SHV-97 [Enterococcus faecalis]
Lahey	gi|125658589|gb|EF373973.1|betalactams|Class_A_betalactamases|SHV	ABN49114.1 EF373973.1:1-861
NCBI	gi|125658589|gb|EF373973.1|betalactams|Class_A_betalactamases|SHV	gi|125658589|gb|EF373973.1|1-861
Resfinder	gi|125658589|gb|EF373973.1|betalactams|Class_A_betalactamases|SHV	blaSHV-97_1_EF373973
NCBI	Bla|Z_32_AP004832|betalactams|Class_A_betalactamases|BLAZ	gi|761646437|gb|CP010952.1|1848078-1848923 gi|304388018|gb|CP002146.1|21099-21944 gi|302334329|gb|CP002115.1|10150-10995 gi|260177101|gb|GQ900475.1|36842-37687 gi|260066169|gb|GQ900467.1|1253-408 gi|260066127|gb|GQ900425.1|17716-18561 gi|260066126|gb|GQ900424.1|8986-9831 gi|260066115|gb|GQ900413.1|8652-7807 gi|260066099|gb|GQ900397.1|16121-15276 gi|260066094|gb|GQ900392.1|17915-17070
Resfinder	Bla|Z_32_AP004832|betalactams|Class_A_betalactamases|BLAZ	blaZ_32_AP004832
ARG-ANNOT	Gly|VanR-A|M97297|3976-4671|696|Glycopeptides|VanA-type_regulator|VANRA	(Gly)VanR-A:M97297:3976-4671:696
CARD	Gly|VanR-A|M97297|3976-4671|696|Glycopeptides|VanA-type_regulator|VANRA	@phgb|M97297|3976-4671|ARO:3002919|vanRA [Enterococcus faecium]
NCBI	Gly|VanR-A|M97297|3976-4671|696|Glycopeptides|VanA-type_regulator|VANRA	gi|975002886|gb|CP013996.1|1-696 gi|925192758|gb|CP012594.1|36763-36068 gi|830872341|gb|KR349520.1|3731-4426 gi|816206772|gb|KR047792.1|3731-4426 gi|695226492|ref|NG_041525.1|3812-4507 gi|359465430|dbj|AB611033.1|16455-15760 gi|319739722|gb|HQ115078.1|22770-22075 gi|312836941|dbj|AB563188.1|65705-65010 gi|695224489|ref|NG_041086.1|9754-9059 gi|304325020|gb|GQ484956.1|25457-26152
NCBI	gi|110610032|gb|DQ679961.1|betalactams|Class_A_betalactamases|TEM	gi|110610032|gb|DQ679961.1|1-1118 gi|926539378|gb|CP012632.1|40436-40469 gi|909636816|emb|LN850165.1|2743-2776 gi|704486155|gb|KM083064.1|117173-117206 gi|566129968|gb|KF705206.1|16369-16402 gi|566129838|gb|KF705205.1|22199-22232 gi|356472769|gb|HQ659758.1|4038-4005 gi|353233769|emb|HE603110.1|32196-32163 gi|695224810|ref|NG_041152.1|1324-1291 gi|228480787|gb|EU935740.1|5715-5682
NCBI	Flq|NC_010400.5984045|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|169150821|emb|CU468230.2|203454-205673
NCBI	ACou|FN543093.2|gene3601|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|323575285|emb|FN543093.2|3659788-3657896
NCBI	Flq|NC_002951.3237159|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|941146344|gb|CP007676.1|1358389-1360791 gi|941142962|gb|CP007672.1|1356603-1359005 gi|941139768|gb|CP007657.1|1370321-1372723 gi|828461663|gb|CP007674.1|1353469-1355871 gi|828444881|gb|CP007670.1|1368972-1371374 gi|827440804|gb|CP011526.1|1356370-1358772 gi|777226173|emb|LN831049.1|2098228-2095826 gi|640834542|gb|CP007690.1|1388113-1390515 gi|610395799|gb|CP007539.1|1410356-1412758 gi|374362062|gb|CP003033.1|1297859-1300261
CARD	CARD|pvgb|AL123456|2518114-2519365|ARO:3003463|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Isoniazid-resistant_kasA|KASA|RequiresSNPConfirmation	@pvgb|AL123456|2518114-2519365|ARO:3003463|Mycobacterium tuberculosis kasA mutant conferring resistance to isoniazid [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|2518114-2519365|ARO:3003463|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Isoniazid-resistant_kasA|KASA|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|2538632-2539883 gi|984989958|gb|CP010339.1|2518567-2519818 gi|984985728|gb|CP010338.1|2517073-2518324 gi|984981517|gb|CP010337.1|2525906-2527157 gi|984976917|gb|CP010336.1|2512044-2513295 gi|984950177|gb|CP010330.1|2525067-2526318 gi|984945858|gb|CP010329.1|2518132-2519383 gi|923105817|gb|CP012506.1|2496852-2498103 gi|918453982|gb|CP012090.1|2294454-2295705 gi|769537622|gb|CP010873.1|2511584-2512835
ARG-ANNOT	MLS|LsaA|AY225127|41-1537|1497|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	(MLS)LsaA:AY225127:41-1537:1497
NCBI	MLS|LsaA|AY225127|41-1537|1497|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	gi|32350897|gb|AY225127.1|41-1537 gi|575789815|gb|KF245574.1|310-780
Resfinder	MLS|LsaA|AY225127|41-1537|1497|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	lsa(A)_1_AY225127
CARD	AGly|aph9-Ib_1_U70376|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	@phgb|U70376|7525-8518|ARO:3002663|APH(9)-Ib [Streptomyces netropsis]
NCBI	AGly|aph9-Ib_1_U70376|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	gi|5579417|gb|U70376.2|U70376|7526-8518
Resfinder	AGly|aph9-Ib_1_U70376|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	aph(9)-Ib_1_U70376
ARG-ANNOT	gi|160948454|emb|AM176555.2|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-80:AM176555:1-861:861
CARD	gi|160948454|emb|AM176555.2|betalactams|Class_A_betalactamases|SHV	@phgb|AM176555|0-861|ARO:3001134|SHV-80 [Klebsiella pneumoniae]
Lahey	gi|160948454|emb|AM176555.2|betalactams|Class_A_betalactamases|SHV	CAJ47135.2 AM176555.2:1-861
NCBI	gi|160948454|emb|AM176555.2|betalactams|Class_A_betalactamases|SHV	gi|160948454|emb|AM176555.2|1-861
Resfinder	gi|160948454|emb|AM176555.2|betalactams|Class_A_betalactamases|SHV	blaSHV-80_1_AM176555
NCBI	gi|356457901|gb|HQ650104.1|betalactams|Class_C_betalactamases|CMY	gi|356457901|gb|HQ650104.1|1-1226
CARD	CARD|phgb|AF079138|1282-2293|ARO:3001265|Erm30|MLS|23S_rRNA_methyltransferases|ERM	@phgb|AF079138|1282-2293|ARO:3001265|Erm(30) [Streptomyces venezuelae]
NCBI	CARD|phgb|AF079138|1282-2293|ARO:3001265|Erm30|MLS|23S_rRNA_methyltransferases|ERM	gi|952467264|gb|CP013129.1|5626471-5625460 gi|932864506|emb|LN881739.1|3436821-3437832 gi|3808326|gb|AF079138.1|AF079138|1283-2294
ARG-ANNOT	Bla|SHV-14|AF226622|55-915|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-14:AF226622:55-915:861
CARD	Bla|SHV-14|AF226622|55-915|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF226622|54-915|ARO:3001073|SHV-14 [Klebsiella pneumoniae]
Lahey	Bla|SHV-14|AF226622|55-915|861|betalactams|Class_A_betalactamases|SHV	AAG17550.1 AF226622.1:55-915
NCBI	Bla|SHV-14|AF226622|55-915|861|betalactams|Class_A_betalactamases|SHV	gi|10443723|gb|AF226622.1|AF226622|55-915 gi|14532426|gb|AY036620.1|53-88
Resfinder	Bla|SHV-14|AF226622|55-915|861|betalactams|Class_A_betalactamases|SHV	blaSHV-14_1_AF226622
NCBI	Bla|Y17715.1|gene1|betalactams|Class_A_betalactamases|OXY	gi|4775479|emb|Y17715.1|86-1022
CARD	CARD|phgb|AHFH01000028|508530-509427|ARO:3003072|Bacillus|MLS|Macrolide_phosphotransferases|MPHB	@phgb|AHFH01000028|508530-509427|ARO:3003072|Bacillus intrinsic mph [Bacillus cereus VD156]
CARD	gi|697286401|dbj|AB901141.1|betalactams|Class_A_betalactamases|GES	@phgb|AB901141|0-864|ARO:3002353|GES-24 [Acinetobacter baumannii]
Lahey	gi|697286401|dbj|AB901141.1|betalactams|Class_A_betalactamases|GES	BAP75641.1 AB901141.1:1-864
NCBI	gi|697286401|dbj|AB901141.1|betalactams|Class_A_betalactamases|GES	gi|970567963|dbj|LC107421.1|972-1835 gi|588479910|dbj|AB914515.1|1-864
ARG-ANNOT	Bla|OXY6-1|AJ871873|1-876|876|betalactams|Class_A_betalactamases|OXY	(Bla)OXY6-1:AJ871873:1-876:876
CARD	Bla|OXY6-1|AJ871873|1-876|876|betalactams|Class_A_betalactamases|OXY	@phgb|AJ871874|0-876|ARO:3002413|OXY-6-1 [Klebsiella oxytoca]
NCBI	Bla|OXY6-1|AJ871873|1-876|876|betalactams|Class_A_betalactamases|OXY	gi|60416712|emb|AJ871873.1|1-876 gi|219920922|emb|FM178423.1|1-825
Resfinder	Bla|OXY6-1|AJ871873|1-876|876|betalactams|Class_A_betalactamases|OXY	blaOXY-6-1_1_AJ871873
NCBI	Sul|sul2_5_AY524415|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|45332239|gb|AY524415.2|4116-4931
Resfinder	Sul|sul2_5_AY524415|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_5_AY524415
NCBI	Bla|mecA_7_BA000018|betalactams|Penicillin_binding_protein|MECA	gi|166203514|gb|EU333401.1|32-2038 gi|47208328|dbj|BA000017.4|44992-46998 gi|47118324|dbj|BA000018.3|45031-47037 gi|13785452|dbj|D86934.2|46776-44770
Resfinder	Bla|mecA_7_BA000018|betalactams|Penicillin_binding_protein|MECA	mecA_7_BA000018
ARG-ANNOT	MLS|MphC|AF167161|5665-6564|900|MLS|Macrolide_phosphotransferases|MPHC	(MLS)MphC:AF167161:5665-6564:900
NCBI	MLS|MphC|AF167161|5665-6564|900|MLS|Macrolide_phosphotransferases|MPHC	gi|941142334|gb|CP007658.1|32800-33699 gi|899756175|gb|CP012118.1|23908-23009 gi|899750899|gb|CP012121.1|31417-32316 gi|807232188|gb|CP011116.1|2241345-2242244 gi|748807120|gb|CP010526.1|1452392-1453291 gi|584465780|gb|CP007177.1|23137-24036 gi|364521287|gb|CP003194.1|54069-53170 gi|304384149|gb|CP002139.1|22906-23805 gi|304386437|gb|CP002143.1|22907-23806 gi|304384496|gb|CP002141.1|22905-23804
Resfinder	MLS|MphC|AF167161|5665-6564|900|MLS|Macrolide_phosphotransferases|MPHC	mph(C)_2_AF167161
ARG-ANNOT	gi|7672820|gb|AF143804.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-92:AF143804:1-861:861
CARD	gi|7672820|gb|AF143804.1|betalactams|Class_A_betalactamases|TEM	@phgb|AF143804|0-861|ARO:3000959|TEM-92 [Proteus mirabilis]
Lahey	gi|7672820|gb|AF143804.1|betalactams|Class_A_betalactamases|TEM	AAF66653.1 AF143804.1:1-861
NCBI	gi|7672820|gb|AF143804.1|betalactams|Class_A_betalactamases|TEM	gi|7672820|gb|AF143804.1|AF143804|1-861
Resfinder	gi|7672820|gb|AF143804.1|betalactams|Class_A_betalactamases|TEM	blaTEM-92_1_AF143804
CARD	1243|KC479325.2|KC479325|betalactams|Class_D_betalactamases|OXA	@phgb|KC479325|668-1496|ARO:3001690|OXA-255 [Acinetobacter pittii]
Lahey	1243|KC479325.2|KC479325|betalactams|Class_D_betalactamases|OXA	AGK07369.1 KC479325.2:669-1496
NCBI	1243|KC479325.2|KC479325|betalactams|Class_D_betalactamases|OXA	gi|567943242|gb|KC479325.2|669-1496
Resfinder	1243|KC479325.2|KC479325|betalactams|Class_D_betalactamases|OXA	blaOXA-255_1_KC479325
CARD	CARD|phgb|AB204810|186-1533|ARO:3000753|abeM|Multi-drug_resistance|Multi-drug_efflux_pumps|ABEM	@phgb|AB204810|186-1533|ARO:3000753|abeM [Acinetobacter baumannii]
NCBI	CARD|phgb|AB204810|186-1533|ARO:3000753|abeM|Multi-drug_resistance|Multi-drug_efflux_pumps|ABEM	gi|66864117|dbj|AB204810.2|187-1534
NCBI	Tet|tetM_10_EU182585|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|962094922|gb|KT281952.1|1-1920 gi|962094920|gb|KT281951.1|1-1920 gi|158264372|gb|EU182585.1|1-1920
Resfinder	Tet|tetM_10_EU182585|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_10_EU182585
ARG-ANNOT	MLS|ErmX|M36726|296-1150|855|MLS|23S_rRNA_methyltransferases|ERMX	(MLS)ErmX:M36726:296-1150:855
NCBI	MLS|ErmX|M36726|296-1150|855|MLS|23S_rRNA_methyltransferases|ERMX	gi|150236|gb|M36726.1|NG2MET|296-1150
Resfinder	MLS|ErmX|M36726|296-1150|855|MLS|23S_rRNA_methyltransferases|ERMX	erm(X)_1_M36726
ARG-ANNOT	1898|AM932669.1|AM932669|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-129:AM932669:699-1502:804
CARD	1898|AM932669.1|AM932669|betalactams|Class_D_betalactamases|OXA	@phgb|AM932669|698-1502|ARO:3001811|OXA-129 [Salmonella enterica subsp. enterica serovar Bredeney]
Lahey	1898|AM932669.1|AM932669|betalactams|Class_D_betalactamases|OXA	CAP69660.1 AM932669.1:699-1502
NCBI	1898|AM932669.1|AM932669|betalactams|Class_D_betalactamases|OXA	gi|382929425|gb|JN559393.1|8651-9454 gi|356609736|gb|JF826500.1|3960-4763 gi|695213027|ref|NG_036538.1|699-1502
Resfinder	1898|AM932669.1|AM932669|betalactams|Class_D_betalactamases|OXA	blaOXA-129_1_AM932669
NCBI	Rif|CP004022.1|gene2794|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|529186758|gb|CP004022.1|3056492-3052464
ARG-ANNOT	gi|18958443|gb|AF467947.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-36:AF467947:1-861:861
CARD	gi|18958443|gb|AF467947.1|betalactams|Class_A_betalactamases|SHV	@phgb|AF467947|0-861|ARO:3001094|SHV-36 [Klebsiella pneumoniae]
Lahey	gi|18958443|gb|AF467947.1|betalactams|Class_A_betalactamases|SHV	AAL82592.1 AF467947.1:1-861
NCBI	gi|18958443|gb|AF467947.1|betalactams|Class_A_betalactamases|SHV	gi|18958443|gb|AF467947.1|1-861
Resfinder	gi|18958443|gb|AF467947.1|betalactams|Class_A_betalactamases|SHV	blaSHV-36_2_AF467947
ARG-ANNOT	Bla|OXA-229|JQ422052|1100-1930|831|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-229:JQ422052:1100-1930:831
CARD	Bla|OXA-229|JQ422052|1100-1930|831|betalactams|Class_D_betalactamases|OXA	@phgb|JQ422052|1099-1930|ARO:3001692|OXA-229 [Acinetobacter bereziniae]
Lahey	Bla|OXA-229|JQ422052|1100-1930|831|betalactams|Class_D_betalactamases|OXA	AFM55000.1 JQ422052.1:1100-1930
NCBI	Bla|OXA-229|JQ422052|1100-1930|831|betalactams|Class_D_betalactamases|OXA	gi|392295709|gb|JQ422052.1|1100-1930
Resfinder	Bla|OXA-229|JQ422052|1100-1930|831|betalactams|Class_D_betalactamases|OXA	blaOXA-229_1_JQ422052
ARG-ANNOT	gi|58701177|gb|AY750912.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-70:AY750912:1-825:825
CARD	gi|58701177|gb|AY750912.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY750912|0-825|ARO:3001618|OXA-70 [Acinetobacter baumannii]
Lahey	gi|58701177|gb|AY750912.1|betalactams|Class_D_betalactamases|OXA	AAW81341.1 AY750912.1:1-825
NCBI	gi|58701177|gb|AY750912.1|betalactams|Class_D_betalactamases|OXA	gi|675324095|gb|CP009256.1|2024250-2023426 gi|58701177|gb|AY750912.1|1-825
Resfinder	gi|58701177|gb|AY750912.1|betalactams|Class_D_betalactamases|OXA	blaOXA-70_1_AY750912
ARG-ANNOT	Phe|CatA3|X07848|272-913|642|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)CatA3:X07848:272-913:642
CARD	Phe|CatA3|X07848|272-913|642|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|X07848|271-913|ARO:3002685|catIII [Plasmid R387]
NCBI	Phe|CatA3|X07848|272-913|642|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|384478111|gb|CP003488.1|282156-281515 gi|47024|emb|X07848.1|272-913 gi|83964619|gb|DQ319067.1|229-1 gi|418206109|gb|JX826405.1|8457-8353 gi|418206100|gb|JX826404.1|5296-5192
Resfinder	Phe|CatA3|X07848|272-913|642|Phenicol|Chloramphenicol_acetyltransferases|CATA	catA3_1_X07848
ARG-ANNOT	gi|289185667|gb|GU207844.1|betalactams|Class_A_betalactamases|GES	(Bla)GES-14:GU20784:1-864:864
CARD	gi|289185667|gb|GU207844.1|betalactams|Class_A_betalactamases|GES	@phgb|GU207844|0-864|ARO:3002343|GES-14 [Acinetobacter baumannii]
Lahey	gi|289185667|gb|GU207844.1|betalactams|Class_A_betalactamases|GES	ADC91899.1 GU207844.1:1-864
NCBI	gi|289185667|gb|GU207844.1|betalactams|Class_A_betalactamases|GES	gi|958114342|dbj|LC100116.1|2173-3036 gi|957657109|dbj|LC099465.1|2168-3031 gi|316308403|gb|HM451497.1|5872-6735 gi|289185667|gb|GU207844.1|1-864
Resfinder	gi|289185667|gb|GU207844.1|betalactams|Class_A_betalactamases|GES	blaGES-14_1_GU207844
ARG-ANNOT	Bla|TEM-112|AY589493|167-1027|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-112:AY589493:167-1027:861
CARD	Bla|TEM-112|AY589493|167-1027|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY589493|166-1027|ARO:3000975|TEM-112 [Escherichia coli]
Lahey	Bla|TEM-112|AY589493|167-1027|861|betalactams|Class_A_betalactamases|TEM	AAS89982.1 AY589493.1:167-1027
NCBI	Bla|TEM-112|AY589493|167-1027|861|betalactams|Class_A_betalactamases|TEM	gi|46370392|gb|AY589493.1|167-1027
Resfinder	Bla|TEM-112|AY589493|167-1027|861|betalactams|Class_A_betalactamases|TEM	blaTEM-112_1_AY589493
ARG-ANNOT	CARD|phgb|M93113|0-660|ARO:3002674|catB|Phenicol|Chloramphenicol_acetyltransferases|CAT	(Phe)CatB:M93113:145-804:630
CARD	CARD|phgb|M93113|0-660|ARO:3002674|catB|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|M93113|0-660|ARO:3002674|catB [Clostridium butyricum]
NCBI	CARD|phgb|M93113|0-660|ARO:3002674|catB|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|144738|gb|M93113.1|CLOCATB|145-804
Lahey	Bla|KF986254.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30273.1 KF986254.1:859-35
NCBI	Bla|KF986254.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389143|gb|KF986254.1|859-35
CARD	Flq|QnrB58_1_JX259319|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JX259319|0-681|ARO:3002771|QnrB58 [Citrobacter freundii]
NCBI	Flq|QnrB58_1_JX259319|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|805300640|gb|KP339261.1|143-823 gi|403495127|gb|JX259319.1|1-681
Resfinder	Flq|QnrB58_1_JX259319|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB58_1_JX259319
ARG-ANNOT	Bla|OXA-204|JQ809466|5375-6172|798|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-204:JQ809466:5375-6172:798
CARD	Bla|OXA-204|JQ809466|5375-6172|798|betalactams|Class_D_betalactamases|OXA	@phgb|JQ809466|5374-6172|ARO:3001788|OXA-204 [Klebsiella pneumoniae]
Lahey	Bla|OXA-204|JQ809466|5375-6172|798|betalactams|Class_D_betalactamases|OXA	AFU91598.1 JQ809466.1:5375-6172
NCBI	Bla|OXA-204|JQ809466|5375-6172|798|betalactams|Class_D_betalactamases|OXA	gi|770524372|gb|KP027885.3|1898-2695 gi|751143670|gb|KP027886.1|961-1758 gi|529273309|gb|KC902852.1|1035-1832 gi|695226711|ref|NG_041562.1|5375-6172
Resfinder	Bla|OXA-204|JQ809466|5375-6172|798|betalactams|Class_D_betalactamases|OXA	blaOXA-204_1_JQ809466
ARG-ANNOT	Phe|CmlA1|M64556|601-1860|1260|Phenicol|Phenicol_efflux_pumps|CML	(Phe)CmlA1:M64556:601-1860:1260
NCBI	Phe|CmlA1|M64556|601-1860|1260|Phenicol|Phenicol_efflux_pumps|CML	gi|695196733|ref|NG_034504.1|601-1860
Resfinder	Phe|CmlA1|M64556|601-1860|1260|Phenicol|Phenicol_efflux_pumps|CML	cmlA1_1_M64556
NCBI	Rif|NC_007622.3792928|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|82655308|emb|AJ938182.1|548167-551718
CARD	CARD|phgb|EU408354|3570-4455|ARO:3002512|LRA-17|betalactams|Class_B_betalactamases|LRA	@phgb|EU408354|3570-4455|ARO:3002512|LRA-17 [uncultured bacterium BLR17]
NCBI	CARD|phgb|EU408354|3570-4455|ARO:3002512|LRA-17|betalactams|Class_B_betalactamases|LRA	gi|169647648|gb|EU408354.1|3571-4456
CARD	CARD|phgb|AY458224|706-1183|ARO:3002529|AAC3-Id|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|AY458224|706-1183|ARO:3002529|AAC(3)-Id [Salmonella enterica subsp. enterica serovar Newport]
NCBI	CARD|phgb|AY458224|706-1183|ARO:3002529|AAC3-Id|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|971187766|gb|KT598359.1|77-554 gi|970955107|gb|KT581256.1|94-571 gi|970955102|gb|KT581254.1|80-557 gi|970861134|gb|KT427378.1|119-596 gi|817491263|gb|KP313760.1|26478-26955 gi|751372772|gb|KM823523.1|77-554 gi|751372769|gb|KM823522.1|59-536 gi|726966122|gb|KM386406.1|77-554 gi|704485635|gb|KJ186149.1|28009-28486 gi|667714421|gb|AY463797.8|27488-27965
ARG-ANNOT	AGly|AadA8|AF326210|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA8:AF326210:1-792:792
NCBI	AGly|AadA8|AF326210|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|14582737|gb|AF326210.1|1-792
Resfinder	AGly|AadA8|AF326210|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA8_1_AF326210
NCBI	Met|nimI_1_FJ940889|Metronidazole|nim_nitroimidazole_reductase|NIMI	gi|238069270|gb|FJ940889.1|1-463
Resfinder	Met|nimI_1_FJ940889|Metronidazole|nim_nitroimidazole_reductase|NIMI	nimI_1_FJ940889
ARG-ANNOT	gi|160948460|emb|AM176558.2|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-83:AM176558:1-861:861
CARD	gi|160948460|emb|AM176558.2|betalactams|Class_A_betalactamases|SHV	@phgb|AM176558|0-861|ARO:3001137|SHV-83 [Klebsiella pneumoniae]
NCBI	gi|160948460|emb|AM176558.2|betalactams|Class_A_betalactamases|SHV	gi|940656576|gb|CP012883.1|5133965-5133105 gi|728797461|emb|LN515533.1|7-867 gi|160948460|emb|AM176558.2|1-861 gi|74058436|gb|DQ166781.1|3-861
Resfinder	gi|160948460|emb|AM176558.2|betalactams|Class_A_betalactamases|SHV	blaSHV-83_1_AM176558
ARG-ANNOT	Bla|OXA-137|EU086835|89-898|810|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-137:EU086835:89-898:810
CARD	Bla|OXA-137|EU086835|89-898|810|betalactams|Class_D_betalactamases|OXA	@phgb|EU086834|88-898|ARO:3001767|OXA-137 [Brachyspira pilosicoli]
Lahey	Bla|OXA-137|EU086835|89-898|810|betalactams|Class_D_betalactamases|OXA	ABW76138.1 EU086834.1:89-898
NCBI	Bla|OXA-137|EU086835|89-898|810|betalactams|Class_D_betalactamases|OXA	gi|404429427|emb|HE793032.1|162184-161375 gi|158634583|gb|EU086834.1|89-898
Resfinder	Bla|OXA-137|EU086835|89-898|810|betalactams|Class_D_betalactamases|OXA	blaOXA-137_1_EU086836
ARG-ANNOT	gi|168824144|gb|EU515251.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-40:EU515251:1-1146:1146
CARD	gi|168824144|gb|EU515251.1|betalactams|Class_C_betalactamases|CMY	@phgb|EU515251|0-1146|ARO:3002051|CMY-40 [Escherichia coli]
Lahey	gi|168824144|gb|EU515251.1|betalactams|Class_C_betalactamases|CMY	ACA30422.1 EU515251.1:1-1146
NCBI	gi|168824144|gb|EU515251.1|betalactams|Class_C_betalactamases|CMY	gi|168824144|gb|EU515251.1|1-1146
Resfinder	gi|168824144|gb|EU515251.1|betalactams|Class_C_betalactamases|CMY	blaCMY-40_1_EU515251
NCBI	Bla|FR823292.1|gene2|betalactams|Class_A_betalactamases|BLAZ	gi|657406205|emb|LK024544.1|4440-3589 gi|452754752|emb|HF569116.1|1647-796 gi|344176319|emb|FR821779.1|35587-34736 gi|333033673|emb|FR823292.1|1647-796
CARD	Phe|fexA_1_AJ549214|Phenicol|Phenicol_efflux_pumps|FEXA	@phgb|AJ549214|176-1604|ARO:3002704|fexA [Staphylococcus lentus]
NCBI	Phe|fexA_1_AJ549214|Phenicol|Phenicol_efflux_pumps|FEXA	gi|695227791|ref|NG_041678.1|18496-17069 gi|695227368|ref|NG_041657.1|28065-26638 gi|478895380|gb|KC206006.1|38178-36751 gi|695227162|ref|NG_041619.1|11745-10318 gi|695225704|ref|NG_041398.1|8524-7097 gi|695200656|ref|NG_036155.1|8655-7228 gi|58577493|emb|AJ715531.1|6262-4835 gi|695210468|ref|NG_035946.1|177-1604
Resfinder	Phe|fexA_1_AJ549214|Phenicol|Phenicol_efflux_pumps|FEXA	fexA_1_AJ549214
ARG-ANNOT	993|AJ511268.1|AJ511268|Phenicol|Phenicol_efflux_pumps|CML	PheCmlA5:HQ141279:907-2166:1260
CARD	993|AJ511268.1|AJ511268|Phenicol|Phenicol_efflux_pumps|CML	@phgb|AY115475|3337-4597|ARO:3002695|cmlA5 [uncultured bacterium]
NCBI	993|AJ511268.1|AJ511268|Phenicol|Phenicol_efflux_pumps|CML	gi|971497538|gb|CP012902.1|79296-78037 gi|943457735|gb|KT818627.1|94765-96024 gi|943457735|gb|KT818627.1|156358-157617 gi|969995310|gb|KT317086.1|1744-3003 gi|969995276|gb|KT317085.1|13853-15112 gi|930425888|gb|KR067579.1|281-1540 gi|884906146|gb|CP012007.1|96731-97990 gi|823683259|emb|LN831185.1|66298-67557 gi|823682865|emb|LN831184.1|249902-248643 gi|822476033|dbj|LC055503.1|101815-103074 gi|778408585|gb|CP009414.2|118928-120187
CARD	725|AJ223604.1|AJ223604|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	@phgb|AJ223604|3017-3650|ARO:3002678|catB6 [Pseudomonas aeruginosa]
NCBI	725|AJ223604.1|AJ223604|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|575771367|dbj|AB901035.1|2231-2863 gi|4210822|emb|AJ223604.1|3018-3650 gi|1435171|emb|X98393.1|2696-3292
CARD	CARD|phgb|NC_007795|1360280-1361636|ARO:3000839|arlS|Multi-drug_resistance|MDR_regulator|ARLS	@phgb|NC_007795|1360280-1361636|ARO:3000839|arlS [Staphylococcus aureus subsp. aureus NCTC 8325]
NCBI	CARD|phgb|NC_007795|1360280-1361636|ARO:3000839|arlS|Multi-drug_resistance|MDR_regulator|ARLS	gi|974161314|gb|CP012018.1|1531425-1532781 gi|974158397|gb|CP012015.1|1532161-1533517 gi|974155539|gb|CP012013.1|1533074-1534430 gi|974152716|gb|CP012012.1|1524955-1526311 gi|974149849|gb|CP012011.1|1580909-1582265 gi|941146344|gb|CP007676.1|1424305-1425661 gi|941142962|gb|CP007672.1|1422694-1424050 gi|941139768|gb|CP007657.1|1436406-1437762 gi|899750970|gb|CP012120.1|2367831-2366475 gi|828461663|gb|CP007674.1|1419560-1420916
CARD	Bla|OXA-331_1_KF203105|betalactams|Class_D_betalactamases|OXA	@phgb|KF203105|0-822|ARO:3001519|OXA-331 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-331_1_KF203105|betalactams|Class_D_betalactamases|OXA	AGW16413.1 KF203105.1:1-822
NCBI	Bla|OXA-331_1_KF203105|betalactams|Class_D_betalactamases|OXA	gi|544207409|gb|KF203105.1|1-822
Resfinder	Bla|OXA-331_1_KF203105|betalactams|Class_D_betalactamases|OXA	blaOXA-331_1_KF203105
NCBI	Flq|QnrB54_1_HE820727|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|619533401|emb|HE820727.2|551-1231
Resfinder	Flq|QnrB54_1_HE820727|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB54_1_HE820727
CARD	MLS|KC539823.1|gene1|MLS|ABC_transporter|VGA	@phgb|KC539823|1017-2586|ARO:3002829|vgaA [Staphylococcus epidermidis]
NCBI	MLS|KC539823.1|gene1|MLS|ABC_transporter|VGA	gi|695227322|ref|NG_041648.1|1018-2586 gi|641688293|emb|HG799495.1|70853-70880 gi|321156851|emb|FR671404.1|6271-6244
ARG-ANNOT	CARD|phgb|M80346|0-1656|ARO:3002817|carA|MLS|Macrolide_resistance_efflux_pumps|CARA	(MLS)CarA:M80346:411-2066:1656
CARD	CARD|phgb|M80346|0-1656|ARO:3002817|carA|MLS|Macrolide_resistance_efflux_pumps|CARA	@phgb|M80346|0-1656|ARO:3002817|carA [Streptomyces thermotolerans]
NCBI	CARD|phgb|M80346|0-1656|ARO:3002817|carA|MLS|Macrolide_resistance_efflux_pumps|CARA	gi|153197|gb|M80346.1|STMCARA|411-2066 gi|551628|dbj|D30759.1|STMACYA|1-192 gi|938161749|gb|CP012697.1|381543-381508 gi|930852296|emb|LN879547.1|2492781-2492816 gi|196121877|gb|CP000750.2|1851957-1851928 gi|576082433|gb|CP006850.1|5532573-5532546
Resfinder	CARD|phgb|M80346|0-1656|ARO:3002817|carA|MLS|Macrolide_resistance_efflux_pumps|CARA	car(A)_1_M80346
NCBI	61|unknown_id|unknown_name|betalactams|Penicillin_binding_protein_regulator|BLAR	gi|155793482|gb|EF540343.1|3230-1464
ARG-ANNOT	Flq|QnrB38|JN173060|2307-2951|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB38:JN173060:2307-2951:645
CARD	Flq|QnrB38|JN173060|2307-2951|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN173060|2306-2951|ARO:3002753|QnrB38 [Citrobacter freundii]
NCBI	Flq|QnrB38|JN173060|2307-2951|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|354508453|gb|JN173060.2|2307-2951 gi|342674040|gb|JN166688.1|1-480
Resfinder	Flq|QnrB38|JN173060|2307-2951|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB38_1_JN173060
ARG-ANNOT	Bla|ACT-7|FJ237368|1-1146|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-7:FJ237368:1-1146:1146
CARD	Bla|ACT-7|FJ237368|1-1146|1146|betalactams|Class_C_betalactamases|ACT	@phgb|FJ237368|0-1146|ARO:3001830|ACT-7 [Klebsiella pneumoniae]
Lahey	Bla|ACT-7|FJ237368|1-1146|1146|betalactams|Class_C_betalactamases|ACT	ACJ05688.1 FJ237368.1:1-1146
NCBI	Bla|ACT-7|FJ237368|1-1146|1146|betalactams|Class_C_betalactamases|ACT	gi|210061216|gb|FJ237368.1|1-1146
Resfinder	Bla|ACT-7|FJ237368|1-1146|1146|betalactams|Class_C_betalactamases|ACT	blaACT-7_1_FJ237368
NCBI	354|unknown_id|unknown_name|Glycopeptides|VanO-type_regulator|VANRO	gi|557879499|gb|KF478993.1|6704-6003
NCBI	MLS|ermB_18_X66468|MLS|23S_rRNA_methyltransferases|ERMB	gi|13549398|gb|AY028776.1|4167-4928 gi|38707181|gb|AY357120.1|9307-8546 gi|23986282|gb|AY126342.1|1390-629 gi|496500|emb|X66468.1|8144-8905 gi|3127116|gb|AF061336.1|4167-4928 gi|1277132|gb|U50977.1|CVU50977|936-181
Resfinder	MLS|ermB_18_X66468|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_18_X66468
NCBI	Flq|CP000647.1|gene3437|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|150953431|gb|CP000647.1|3763448-3761190
NCBI	gi|387861052|gb|JQ711185.1|betalactams|Class_C_betalactamases|CMY	gi|387861052|gb|JQ711185.1|1028-2255
ARG-ANNOT	gi|387568115|gb|JQ664733.1|betalactams|Class_C_betalactamases|MIR	(Bla)MIR-6:JQ664733:1-1146:1146
CARD	gi|387568115|gb|JQ664733.1|betalactams|Class_C_betalactamases|MIR	@phgb|JQ664733|0-1146|ARO:3002171|MIR-6 [Enterobacter cloacae]
Lahey	gi|387568115|gb|JQ664733.1|betalactams|Class_C_betalactamases|MIR	AFJ79785.1 JQ664733.1:1-1146
NCBI	gi|387568115|gb|JQ664733.1|betalactams|Class_C_betalactamases|MIR	gi|387568115|gb|JQ664733.1|1-1146
Resfinder	gi|387568115|gb|JQ664733.1|betalactams|Class_C_betalactamases|MIR	blaMIR-6_1_JQ664733
CARD	Bla|CTX-M-62_1_EF219134|betalactams|Class_A_betalactamases|CTX	@phgb|EF219134|2125-3001|ARO:3001923|CTX-M-62 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-62_1_EF219134|betalactams|Class_A_betalactamases|CTX	ABP04245.1 EF219134.3:2126-3001
NCBI	Bla|CTX-M-62_1_EF219134|betalactams|Class_A_betalactamases|CTX	gi|695216742|ref|NG_037697.1|2126-3001
Resfinder	Bla|CTX-M-62_1_EF219134|betalactams|Class_A_betalactamases|CTX	blaCTX-M-62_1_EF219134
ARG-ANNOT	Bla|OXA-108|EF650034|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-108:EF650034:1-825:825
CARD	Bla|OXA-108|EF650034|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|EF650034|0-825|ARO:3001639|OXA-108 [Acinetobacter baumannii]
Lahey	Bla|OXA-108|EF650034|1-825|825|betalactams|Class_D_betalactamases|OXA	ABV31688.1 EF650034.1:1-825
NCBI	Bla|OXA-108|EF650034|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|157285902|gb|EF650034.1|1-825
Resfinder	Bla|OXA-108|EF650034|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-108_1_EF650034
CARD	CARD|phgb|AJ437107|208-1069|ARO:3000900|TEM-30|betalactams|Class_A_betalactamases|TEM	@phgb|AJ437107|208-1069|ARO:3000900|TEM-30 [Escherichia coli]
NCBI	CARD|phgb|AJ437107|208-1069|ARO:3000900|TEM-30|betalactams|Class_A_betalactamases|TEM	gi|25900616|emb|AJ437107.1|209-1070
ARG-ANNOT	148|JF769133.1|JF769133|Multi-drug_resistance|Multi-drug_efflux_pumps|MSR	(MLS)MsrE:JF769133:7246-8721:1476
CARD	148|JF769133.1|JF769133|Multi-drug_resistance|Multi-drug_efflux_pumps|MSR	@phgb|NC_007682|20649-22125|ARO:3003109|msrE [Escherichia coli]
NCBI	148|JF769133.1|JF769133|Multi-drug_resistance|Multi-drug_efflux_pumps|MSR	gi|984881271|gb|CP014215.1|2284947-2283472 gi|984881271|gb|CP014215.1|2297711-2296236 gi|974022331|gb|CP013924.1|1448786-1450261 gi|971497742|gb|CP012903.1|44288-45763 gi|971497538|gb|CP012902.1|50595-49120 gi|971493847|gb|CP010351.1|367329-365854 gi|969995310|gb|KT317086.1|18080-19555 gi|969995276|gb|KT317085.1|30189-31664 gi|969995259|gb|KT317079.1|10867-12342 gi|969995242|gb|KT317078.1|12753-14228 gi|969995220|gb|KT317076.1|13728-15203
Resfinder	148|JF769133.1|JF769133|Multi-drug_resistance|Multi-drug_efflux_pumps|MSR	msr(E)_4_EU294228
NCBI	1080|AF294653.1|AF294653|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|695207935|ref|NG_035452.1|1709-2488
NCBI	gi|6176543|gb|AF190693.1|betalactams|Class_A_betalactamases|TEM	gi|6176543|gb|AF190693.1|AF190693|1-1103
NCBI	Sul|AP010904.1|gene2604|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|239794502|dbj|AP010904.1|2875004-2874093 gi|295429362|gb|CP002008.1|2735747-2735717 gi|365809978|gb|CP003229.1|837792-837820 gi|337762320|emb|FQ859184.1|975363-975335
NCBI	gi|29692030|gb|AY238472.1|betalactams|Class_A_betalactamases|CTX	gi|695209447|ref|NG_035830.1|1-908
NCBI	AGly|NC_010558.1.6275958|Aminoglycosides|16S_rRNA_methyltransferases|RMTB	gi|970338578|gb|KT725789.1|76481-77304 gi|970338578|gb|KT725789.1|77308-77277 gi|970338460|gb|KT725788.1|81741-82564 gi|970338460|gb|KT725788.1|82568-82537 gi|962148759|gb|KT002541.1|4929-5752 gi|962148759|gb|KT002541.1|5756-5725 gi|961666360|gb|KT185451.1|16716-15893 gi|961666360|gb|KT185451.1|15889-15920 gi|961494526|gb|KT282968.1|32453-33276 gi|961494526|gb|KT282968.1|33280-33249 gi|954665559|gb|KT879914.1|12008-12831 gi|954665559|gb|KT879914.1|12835-12804 gi|873464120|gb|KR259134.1|969-1792 gi|873464120|gb|KR259134.1|1796-1765 gi|873464057|gb|KR259131.1|2832-3655 gi|873464057|gb|KR259131.1|3659-3628 gi|873464024|gb|KR259130.1|2585-3408 gi|873464024|gb|KR259130.1|3412-3381 gi|817046807|gb|KP893385.1|83747-84570 gi|817046807|gb|KP893385.1|84574-84543
NCBI	1436|AY489045.1|AY489045|Glycopeptides|VanD-type_regulator|VANSD	gi|40021670|gb|AY489045.1|689-1834
Resfinder	1436|AY489045.1|AY489045|Glycopeptides|VanD-type_regulator|VANSD	VanS-D_3_AY489045
ARG-ANNOT	449|unknown_id|unknown_name|MLS|Streptogramin_A_O-acetyltransferase|VATA	(MLS)VatA:L07778:258-917:660
CARD	449|unknown_id|unknown_name|MLS|Streptogramin_A_O-acetyltransferase|VATA	@phgb|L07778|0-660|ARO:3002840|vatA [Staphylococcus aureus]
NCBI	449|unknown_id|unknown_name|MLS|Streptogramin_A_O-acetyltransferase|VATA	gi|695199377|ref|NG_035213.1|2863-2204 gi|398084|gb|L07778.1|STAVAT|258-917 gi|153076|gb|M20129.1|STAPVGHG|1546-1883 gi|150753|gb|M36022.1|PIPVGB|1546-1883
Resfinder	449|unknown_id|unknown_name|MLS|Streptogramin_A_O-acetyltransferase|VATA	vat(A)_1_L07778
CARD	CARD|phgb|AF118110|71-1037|ARO:3003002|CfxA2|betalactams|Class_A_betalactamases|CFX	@phgb|AF118110|71-1037|ARO:3003002|CfxA2 [Prevotella intermedia]
NCBI	CARD|phgb|AF118110|71-1037|ARO:3003002|CfxA2|betalactams|Class_A_betalactamases|CFX	gi|4566898|gb|AF118110.1|AF118110|72-1038 gi|209570233|emb|AM940013.1|921-1
NCBI	Tet|tetQ_3_U73497|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	gi|1916015|gb|U73497.1|PIU73497|308-2320
Resfinder	Tet|tetQ_3_U73497|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	tet(Q)_3_U73497
CARD	gi|698174155|gb|KM087832.1|betalactams|Class_C_betalactamases|ACT	@phgb|KM087832|0-1146|ARO:3001849|ACT-29 [Enterobacter asburiae]
Lahey	gi|698174155|gb|KM087832.1|betalactams|Class_C_betalactamases|ACT	AIT76085.1 KM087832.1:1-1146
NCBI	gi|698174155|gb|KM087832.1|betalactams|Class_C_betalactamases|ACT	gi|698174155|gb|KM087832.1|1-1146
NCBI	Sul|NC_003112.2.903415|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|744797373|gb|CP006869.1|1821639-1822496 gi|730579451|gb|CP009422.1|340596-339739 gi|325199235|gb|CP002420.1|561697-562554 gi|66731897|gb|AE002098.2|1769557-1768700 gi|45023|emb|X68063.1|29-886 gi|45021|emb|X68062.1|697-1554 gi|57339164|gb|AY722007.1|14-871 gi|57339134|gb|AY721992.1|19-876
Resfinder	Fos|fosA_6_NZ_DS999363|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_6_NZ_DS999363
ARG-ANNOT	gi|66220179|gb|DQ023162.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-41:DQ023162:1-876:876
CARD	gi|66220179|gb|DQ023162.1|betalactams|Class_A_betalactamases|CTX	@phgb|DQ023162|0-876|ARO:3001903|CTX-M-41 [Proteus mirabilis]
Lahey	gi|66220179|gb|DQ023162.1|betalactams|Class_A_betalactamases|CTX	AAY43008.1 DQ023162.1:1-876
NCBI	gi|66220179|gb|DQ023162.1|betalactams|Class_A_betalactamases|CTX	gi|66220179|gb|DQ023162.1|1-876
Resfinder	gi|66220179|gb|DQ023162.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-41_1_DQ023162
CARD	CARD|pvgb|AL450380|2273268-2276805|ARO:3003284|Mycobacterium|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	@pvgb|AL450380|2273268-2276805|ARO:3003284|Mycobacterium leprae rpoB mutants conferring resistance to rifampicin [Mycobacterium leprae TN]
NCBI	CARD|pvgb|AL450380|2273268-2276805|ARO:3003284|Mycobacterium|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|219932450|emb|FM211192.1|2273194-2276731 gi|13093428|emb|AL583923.1|274319-277856
NCBI	1376|AF175293.1|AF175293|Glycopeptides|VanD-type_regulator|VANSD	gi|5759260|gb|AF175293.1|AF175293|759-1460
Resfinder	1376|AF175293.1|AF175293|Glycopeptides|VanD-type_regulator|VANSD	VanS-D_2_AF175293
ARG-ANNOT	Tmt|DfrA33|FM957884|88-585|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA33:FM957884:88-585:498
CARD	Tmt|DfrA33|FM957884|88-585|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|FM957884|87-585|ARO:3003018|dfrA22 [uncultured bacterium]
NCBI	Tmt|DfrA33|FM957884|88-585|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|221360487|emb|FM957884.1|88-585
Resfinder	Tmt|DfrA33|FM957884|88-585|498|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA33_1_FM957884
NCBI	Bla|PAO_1_AY083595|betalactams|Class_C_betalactamases|PDC	gi|20135565|gb|AY083595.1|45-1238
Resfinder	Bla|PAO_1_AY083595|betalactams|Class_C_betalactamases|PDC	blaPAO_1_AY083595
CARD	Bla|TEM-208_1_KC865667|betalactams|Class_A_betalactamases|TEM	@phgb|KC865667|183-1044|ARO:3001385|TEM-208 [Escherichia coli]
Lahey	Bla|TEM-208_1_KC865667|betalactams|Class_A_betalactamases|TEM	AGL39384.1 KC865667.1:184-1044
NCBI	Bla|TEM-208_1_KC865667|betalactams|Class_A_betalactamases|TEM	gi|494595013|gb|KC865667.1|184-1044
Resfinder	Bla|TEM-208_1_KC865667|betalactams|Class_A_betalactamases|TEM	blaTEM-208_1_KC865667
ARG-ANNOT	MLS|LnuB|AJ238249|127-930|804|MLS|Lincosamide_nucleotidyltransferases|LNUB	(MLS)LnuB:AJ238249:127-930:804
CARD	MLS|LnuB|AJ238249|127-930|804|MLS|Lincosamide_nucleotidyltransferases|LNUB	@phgb|JX560992|12925-13729|ARO:3000275|linB [Staphylococcus aureus]
NCBI	MLS|LnuB|AJ238249|127-930|804|MLS|Lincosamide_nucleotidyltransferases|LNUB	gi|927820447|gb|KT448819.1|13763-12960 gi|695227123|ref|NG_041616.1|12926-13729 gi|4633124|gb|AF110130.1|AF110130|127-930
Resfinder	MLS|LnuB|AJ238249|127-930|804|MLS|Lincosamide_nucleotidyltransferases|LNUB	lnu(B)_1_AJ238249
ARG-ANNOT	Bla|CTX-M-30|AY292654|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-30:AY292654:1-876:876
CARD	Bla|CTX-M-30|AY292654|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY292654|0-876|ARO:3001892|CTX-M-30 [Citrobacter freundii]
Lahey	Bla|CTX-M-30|AY292654|1-876|876|betalactams|Class_A_betalactamases|CTX	AAP43508.1 AY292654.1:1-876
NCBI	Bla|CTX-M-30|AY292654|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|695209676|ref|NG_035856.1|1-876
Resfinder	Bla|CTX-M-30|AY292654|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-30_1_AY292654
CARD	CARD|phgb|AF190692|208-1069|ARO:3000946|TEM-79|betalactams|Class_A_betalactamases|TEM	@phgb|AF190692|208-1069|ARO:3000946|TEM-79 [Escherichia coli]
NCBI	CARD|phgb|AF190692|208-1069|ARO:3000946|TEM-79|betalactams|Class_A_betalactamases|TEM	gi|6176541|gb|AF190692.1|AF190692|209-1070
CARD	AGly|aph3-prime-Va_1_K00432|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|K00432|306-1113|ARO:3002649|APH(3')-Va [Streptomyces fradiae]
NCBI	AGly|aph3-prime-Va_1_K00432|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|153160|gb|K00432.1|STMAPH|307-1113 gi|669132793|gb|KM232615.1|1539-1801
Resfinder	AGly|aph3-prime-Va_1_K00432|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-Va_1_K00432
NCBI	gi|3282027|emb|Y17583.1|betalactams|Class_A_betalactamases|TEM	gi|3282027|emb|Y17583.1|1-1071
CARD	CARD|phgb|ACMJ01000036|72074-72986|ARO:3003072|Bacillus|MLS|Macrolide_phosphotransferases|MPH	@phgb|ACMJ01000036|72074-72986|ARO:3003072|Bacillus intrinsic mph [Bacillus cereus Rock3-29]
CARD	CARD|phgb|KF478993|4909-5947|ARO:3002941|vanSO|Glycopeptides|VanO-type_regulator|VANSO	@phgb|KF478993|4909-5947|ARO:3002941|vanSO [Rhodococcus equi]
NCBI	CARD|phgb|KF478993|4909-5947|ARO:3002941|vanSO|Glycopeptides|VanO-type_regulator|VANSO	gi|557879499|gb|KF478993.1|4910-5948 gi|675824235|gb|CP009215.1|1899057-1899085
CARD	CARD|phgb|AF162694|2438-3011|ARO:3002966|vanXYC|Glycopeptides|VanC-type_resistance_protein|VANXYC	@phgb|AF162694|2438-3011|ARO:3002966|vanXYC [Enterococcus gallinarum]
NCBI	CARD|phgb|AF162694|2438-3011|ARO:3002966|vanXYC|Glycopeptides|VanC-type_resistance_protein|VANXYC	gi|67479934|gb|DQ022190.1|1233-1806 gi|9294728|gb|AF162694.1|AF162694|2439-3012
CARD	CARD|phgb|JX028276|35585-36821|ARO:3002883|rgt1438|Rifampin|Rifampin_glycosyltransferase|RGT	@phgb|JX028276|35585-36821|ARO:3002883|rgt1438 [Streptomyces sp. WAC1438]
NCBI	CARD|phgb|JX028276|35585-36821|ARO:3002883|rgt1438|Rifampin|Rifampin_glycosyltransferase|RGT	gi|397529824|gb|JX028276.1|35586-36822
ARG-ANNOT	1182|unknown_id|unknown_name|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-3:X64523:477-1337:861
Lahey	1182|unknown_id|unknown_name|betalactams|Class_A_betalactamases|TEM	CAA45828.1 X64523.1:1337-477
NCBI	1182|unknown_id|unknown_name|betalactams|Class_A_betalactamases|TEM	gi|695196410|ref|NG_034408.1|1337-477
Resfinder	1182|unknown_id|unknown_name|betalactams|Class_A_betalactamases|TEM	blaTEM-3_1_X64523
NCBI	Tet|tetH_1_Y16103|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	gi|4138314|emb|Y16103.1|1140-2342 gi|356596244|gb|CP003022.1|336102-336144
Resfinder	Tet|tetH_1_Y16103|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	tet(H)_1_Y16103
NCBI	Rif|NC_002951.3236234|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|610395799|gb|CP007539.1|606427-609978 gi|57284222|gb|CP000046.1|606988-610539
ARG-ANNOT	Gly|VanC2|L29638|33-1085|1053|Glycopeptides|VanC-type_resistance_protein|VANC	(Gly)VanC2:L29638:33-1085:1053
NCBI	Gly|VanC2|L29638|33-1085|1053|Glycopeptides|VanC-type_resistance_protein|VANC	gi|161779878|gb|EU151761.1|29-1081 gi|624699|gb|L29638.1|ENEVANCR|33-1085 gi|345287339|gb|JN003410.1|1-386
ARG-ANNOT	Bla|cphA4|AY227050|131-895|765|betalactams|Class_B_betalactamases|CPHA	(Bla)cphA4:AY227050:131-895:765
CARD	Bla|cphA4|AY227050|131-895|765|betalactams|Class_B_betalactamases|CPHA	@phgb|AY227050|130-895|ARO:3003100|cphA4 [Aeromonas allosaccharophila]
NCBI	Bla|cphA4|AY227050|131-895|765|betalactams|Class_B_betalactamases|CPHA	gi|37359431|gb|AY227050.1|131-895
Resfinder	Bla|cphA4|AY227050|131-895|765|betalactams|Class_B_betalactamases|CPHA	cphA4_1_AY227050
Lahey	1638|AB985401.1|AB985401|betalactams|Class_A_betalactamases|PER	BAP39824.1 AB985401.1:5557-6483
NCBI	1638|AB985401.1|AB985401|betalactams|Class_A_betalactamases|PER	gi|675294670|dbj|AB985401.1|5557-6483
ARG-ANNOT	Bla|SHV-51|AY289548|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-51:AY289548:1-861:861
CARD	Bla|SHV-51|AY289548|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY289548|0-861|ARO:3001108|SHV-51 [Klebsiella pneumoniae]
Lahey	Bla|SHV-51|AY289548|1-861|861|betalactams|Class_A_betalactamases|SHV	AAP41944.1 AY289548.1:1-861
NCBI	Bla|SHV-51|AY289548|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|31075042|gb|AY289548.1|1-861
Resfinder	Bla|SHV-51|AY289548|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-51_1_AY289548
NCBI	Bla|DQ831141.1|gene2|betalactams|Class_A_betalactamases|CARB	gi|829496271|gb|KP420006.1|1359-2228 gi|815968487|gb|CP011317.1|5587392-5588261 gi|800908878|gb|KP345882.1|99012-98143 gi|777182157|emb|LN829403.1|70646-71515 gi|766547679|gb|KP116299.1|40819-41688 gi|742994109|gb|CP010391.1|50752-49883 gi|704485843|gb|KJ186153.1|37322-38191 gi|686483924|gb|KM111262.1|167-1036 gi|675294670|dbj|AB985401.1|1023-1892 gi|660573358|gb|CP008790.1|139113-139982
ARG-ANNOT	Gly|VanA-B|AF192329|28835-29863|1029|Glycopeptides|VanB-type_resistance_protein|VANB	(Gly)VanA-B:AF192329:28835-29863:1029
NCBI	Gly|VanA-B|AF192329|28835-29863|1029|Glycopeptides|VanB-type_resistance_protein|VANB	gi|695199646|ref|NG_035288.1|28835-29863
Resfinder	Gly|VanA-B|AF192329|28835-29863|1029|Glycopeptides|VanB-type_resistance_protein|VANB	VanA-B_1_AF192329
NCBI	1435|AY489045.1|AY489045|Glycopeptides|VanD-type_regulator|VANRD	gi|40021670|gb|AY489045.1|1-699 gi|484574986|gb|CP005586.1|3026140-3026112
Resfinder	1435|AY489045.1|AY489045|Glycopeptides|VanD-type_regulator|VANRD	VanR-D_4_AY489045
NCBI	Phe|floR_1_AF071555|Phenicol|Phenicol_efflux_pumps|FLOR	gi|6625533|emb|AJ251806.1|34-1248 gi|4063850|gb|AF071555.1|AF071555|4445-5659
Resfinder	Phe|floR_1_AF071555|Phenicol|Phenicol_efflux_pumps|FLOR	floR_1_AF071555
NCBI	Rif|NC_009487.5169226|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|147739516|gb|CP000703.1|620143-623694
ARG-ANNOT	Bla|OKP-A-13|FJ534513|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-13:FJ534513:1-861:861
CARD	Bla|OKP-A-13|FJ534513|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|FJ534513|0-861|ARO:3002430|OKP-A-13 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-13|FJ534513|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|219958083|gb|FJ534513.1|1-861
Resfinder	Bla|OKP-A-13|FJ534513|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-13_1_FJ534513
CARD	CARD|phgb|U00096|2812615-2814154|ARO:3000074|emrB|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRB	@phgb|U00096|2812615-2814154|ARO:3000074|emrB [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|2812615-2814154|ARO:3000074|emrB|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRB	gi|985000614|gb|CP014225.1|1009816-1011355 gi|958627747|gb|CP013253.1|609883-608344 gi|939732440|gb|CP011343.2|2787493-2789032 gi|939731527|gb|CP011342.2|2788485-2790024 gi|937526251|gb|CP012870.1|1829040-1827501 gi|937521852|gb|CP012869.1|1829040-1827501 gi|937517453|gb|CP012868.1|1829040-1827501 gi|932857508|emb|LN877770.1|3636329-3637868 gi|923416119|gb|CP011113.1|2769463-2771002 gi|899729770|gb|CP012127.1|2787063-2788602
ARG-ANNOT	Bla|KPC-5|EU400222|2160-3041|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-5:EU400222:2160-3041:882
CARD	Bla|KPC-5|EU400222|2160-3041|882|betalactams|Class_A_betalactamases|KPC	@phgb|EU400222|2159-3041|ARO:3002315|KPC-5 [Pseudomonas aeruginosa]
Lahey	Bla|KPC-5|EU400222|2160-3041|882|betalactams|Class_A_betalactamases|KPC	ABY91240.1 EU400222.2:2160-3041
NCBI	Bla|KPC-5|EU400222|2160-3041|882|betalactams|Class_A_betalactamases|KPC	gi|808157946|gb|KP870110.1|1534-2415 gi|429201127|gb|JX193302.1|7980-7099 gi|214010993|gb|EU400222.2|2160-3041
Resfinder	Bla|KPC-5|EU400222|2160-3041|882|betalactams|Class_A_betalactamases|KPC	blaKPC-5_1_EU400222
NCBI	Tet|tetL_6_X08034|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	gi|983204966|gb|CP014166.1|4029732-4028356 gi|846133629|gb|CP011882.1|927825-926449 gi|807072327|gb|CP011115.1|4189084-4187708 gi|749183975|gb|CP010314.1|4168553-4167177 gi|728887195|gb|CP010053.1|4188818-4187442 gi|728882887|gb|CP010052.1|4189070-4187694 gi|724425628|emb|LN680001.1|4207066-4205690 gi|723796434|emb|LN649259.1|4225103-4223727 gi|670919138|gb|CP005997.1|4032729-4031353 gi|655529211|gb|CP007409.1|4014291-4012915
Resfinder	Tet|tetL_6_X08034|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	tet(L)_6_X08034
ARG-ANNOT	Bla|FOX-9|JF896803|1-1149|1149|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-9:JF896803:1-1149:1149
CARD	Bla|FOX-9|JF896803|1-1149|1149|betalactams|Class_C_betalactamases|FOX	@phgb|JF896803|0-1149|ARO:3002163|FOX-9 [Klebsiella pneumoniae]
Lahey	Bla|FOX-9|JF896803|1-1149|1149|betalactams|Class_C_betalactamases|FOX	AEK78851.1 JF896803.1:1-1149
NCBI	Bla|FOX-9|JF896803|1-1149|1149|betalactams|Class_C_betalactamases|FOX	gi|340937393|gb|JF896803.1|1-1149
Resfinder	Bla|FOX-9|JF896803|1-1149|1149|betalactams|Class_C_betalactamases|FOX	blaFOX-9_1_JF896803
CARD	CARD|phgb|AL123456|3773015-3773567|ARO:3003035|mfpA|Fluoroquinolones|Quinolone_resistance_protein_Qnr|MFPA	@phgb|AL123456|3773015-3773567|ARO:3003035|mfpA [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|phgb|AL123456|3773015-3773567|ARO:3003035|mfpA|Fluoroquinolones|Quinolone_resistance_protein_Qnr|MFPA	gi|984985728|gb|CP010338.1|3769421-3769973 gi|984976917|gb|CP010336.1|3766893-3767445 gi|984972452|gb|CP010335.1|3776569-3777121 gi|984967653|gb|CP010334.1|3753427-3753979 gi|984959134|gb|CP010332.1|3722573-3723125 gi|984954355|gb|CP010331.1|3738381-3738933 gi|984950177|gb|CP010330.1|3782728-3783280 gi|984945858|gb|CP010329.1|3788895-3789447 gi|971171538|gb|CP013741.1|3758886-3759438 gi|927989386|gb|CP011455.1|3754485-3755037
CARD	gi|30023946|gb|AF208529.2|betalactams|Class_A_betalactamases|GES	@phgb|AY260546|4477-5341|ARO:3002336|GES-7 [Escherichia coli]
Lahey	gi|30023946|gb|AF208529.2|betalactams|Class_A_betalactamases|GES	AAF28763.2 AF208529.2:1-864
NCBI	gi|30023946|gb|AF208529.2|betalactams|Class_A_betalactamases|GES	gi|695209451|ref|NG_035832.1|1-864 gi|695211628|ref|NG_036097.1|4478-5341
NCBI	Gly|VanH-D_4_AY489045|Glycopeptides|VanD-type_resistance_protein|VANHD	gi|40021670|gb|AY489045.1|3046-4017 gi|54114872|dbj|AB183866.1|1-79
Resfinder	Gly|VanH-D_4_AY489045|Glycopeptides|VanD-type_resistance_protein|VANHD	VanH-D_4_AY489045
ARG-ANNOT	1821|GQ149347.1|GQ149347|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-171:GQ149347:5270-6030:861
CARD	1821|GQ149347.1|GQ149347|betalactams|Class_A_betalactamases|TEM	@phgb|GQ149347|5269-6130|ARO:3001037|TEM-171 [Escherichia coli]
Lahey	1821|GQ149347.1|GQ149347|betalactams|Class_A_betalactamases|TEM	ADA79630.1 GQ149347.1:5270-6130
NCBI	1821|GQ149347.1|GQ149347|betalactams|Class_A_betalactamases|TEM	gi|946724714|gb|KT020828.1|1402-2262 gi|896684502|gb|KP834588.1|4573-3713 gi|407230507|gb|JX518291.1|3290-2430 gi|310686588|gb|HQ007052.1|4020-4880 gi|310686580|gb|HQ007050.1|2518-3378 gi|282161295|gb|GQ149347.1|5270-6130 gi|219646790|gb|FJ009256.1|1111-251 gi|193072614|dbj|AB293446.1|2538-1678 gi|187969538|gb|EU680847.1|2608-3468 gi|187969533|gb|EU680846.1|2938-3798
Resfinder	1821|GQ149347.1|GQ149347|betalactams|Class_A_betalactamases|TEM	blaTEM-171_1_GQ149347
NCBI	1416|DQ018710.1|DQ018710|Glycopeptides|VanA-type_regulator|VANRA	gi|66731632|gb|DQ018710.1|3048-3743
Resfinder	1416|DQ018710.1|DQ018710|Glycopeptides|VanA-type_regulator|VANRA	VanR-Pt_3_DQ018710
NCBI	1913|unknown_id|unknown_name|betalactams|Class_C_betalactamases|DHA	gi|944204231|gb|KR733543.1|2853-3063 gi|823683259|emb|LN831185.1|84631-84421 gi|746616805|gb|KJ187752.1|36297-36507 gi|746616518|gb|KF856624.1|43384-43594 gi|695227729|ref|NG_041672.1|7809-8019 gi|532025274|gb|KC999035.1|20157-20367 gi|485460042|dbj|AB759690.1|34730-34940 gi|429345463|gb|JX988621.1|49758-49968 gi|335355361|gb|JF922606.1|2937-3147 gi|323700877|gb|HQ451074.1|12301-12511
CARD	CARD|pvgb|CP001138|613435-614017|ARO:3003379|Salmonella|Multi-drug_resistance|MDR_regulator|RAMR|RequiresSNPConfirmation	@pvgb|CP001138|613435-614017|ARO:3003379|Salmonella serovars ramR mutants [Salmonella enterica subsp. enterica serovar Agona str. SL483]
NCBI	CARD|pvgb|CP001138|613435-614017|ARO:3003379|Salmonella|Multi-drug_resistance|MDR_regulator|RAMR|RequiresSNPConfirmation	gi|807109228|gb|CP011259.1|2442813-2443395 gi|605537200|gb|CP007533.1|198228-198810 gi|563346448|gb|CP006876.1|611956-612538 gi|451908558|gb|CP004027.1|1664316-1663734 gi|197211055|gb|CP001138.1|613436-614018 gi|343456139|gb|JF343839.1|582-1
CARD	gi|558605694|gb|KF526116.1|betalactams|Class_C_betalactamases|CMY	@phgb|KF526116|0-1146|ARO:3002115|CMY-103 [Citrobacter freundii]
Lahey	gi|558605694|gb|KF526116.1|betalactams|Class_C_betalactamases|CMY	AHA80104.1 KF526116.1:1-1146
NCBI	gi|558605694|gb|KF526116.1|betalactams|Class_C_betalactamases|CMY	gi|558605694|gb|KF526116.1|1-1146
ARG-ANNOT	Tet|Tet-44|FN594949|25245-27167|1923|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET44	(Tet)Tet-44:FN594949:25245-27167:1923
CARD	Tet|Tet-44|FN594949|25245-27167|1923|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET44	@phgb|FN594949|25244-27167|ARO:3000556|tet44 [Campylobacter fetus subsp. fetus]
NCBI	Tet|Tet-44|FN594949|25245-27167|1923|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET44	gi|299469399|emb|FN594949.1|25245-27167
Resfinder	Tet|Tet-44|FN594949|25245-27167|1923|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET44	tet(44)_2_FN594949
ARG-ANNOT	Bla|TEM-133|AY528425|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-133:AY528425::1-861:861
CARD	Bla|TEM-133|AY528425|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY528425|0-861|ARO:3000997|TEM-133 [Klebsiella pneumoniae]
Lahey	Bla|TEM-133|AY528425|1-861|861|betalactams|Class_A_betalactamases|TEM	AAS19171.1 AY528425.1:1-861
NCBI	Bla|TEM-133|AY528425|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|42540510|gb|AY528425.1|1-861
Resfinder	Bla|TEM-133|AY528425|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-133_1_AY528425
CARD	349|KF478993.1|KF478993|Glycopeptides|VanA-type_resistance_protein|VANA	@phgb|KF478993|1539-2580|ARO:3002913|vanO [Rhodococcus equi]
NCBI	349|KF478993.1|KF478993|Glycopeptides|VanA-type_resistance_protein|VANA	gi|557879499|gb|KF478993.1|1540-2580 gi|50082938|gb|AY648036.1|1-378
CARD	gi|556904157|gb|KF421162.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF421162|0-822|ARO:3001546|OXA-359 [Acinetobacter calcoaceticus]
Lahey	gi|556904157|gb|KF421162.1|betalactams|Class_D_betalactamases|OXA	AGZ83155.1 KF421162.1:1-822
NCBI	gi|556904157|gb|KF421162.1|betalactams|Class_D_betalactamases|OXA	gi|556904157|gb|KF421162.1|1-822
Resfinder	gi|556904157|gb|KF421162.1|betalactams|Class_D_betalactamases|OXA	blaOXA-359_1_KF421162
NCBI	gi|160948442|emb|AM176551.2|betalactams|Class_A_betalactamases|SHV	gi|160948442|emb|AM176551.2|1-891 gi|124263629|gb|EF210158.1|5-895
ARG-ANNOT	AGly|Aph9-Ib|U70376|3618-4541|996|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	(AGly)Aph9-Ib:U70376:3618-4541:996
NCBI	AGly|Aph9-Ib|U70376|3618-4541|996|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|5579417|gb|U70376.2|U70376|3618-4541
ARG-ANNOT	gi|265260944|gb|GU127598.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-92:GU127598:1-876:876
CARD	gi|265260944|gb|GU127598.1|betalactams|Class_A_betalactamases|CTX	@phgb|GU127598|0-876|ARO:3001952|CTX-M-92 [Escherichia coli]
Lahey	gi|265260944|gb|GU127598.1|betalactams|Class_A_betalactamases|CTX	ACY74743.1 GU127598.1:1-876
NCBI	gi|265260944|gb|GU127598.1|betalactams|Class_A_betalactamases|CTX	gi|265260944|gb|GU127598.1|1-876
Resfinder	gi|265260944|gb|GU127598.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-92_1_GU127598
CARD	AGly|FJ503047.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|FJ503047|0-519|ARO:3002592|AAC(6')-Ib-Hangzhou [Acinetobacter baumannii]
NCBI	AGly|FJ503047.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|219816577|gb|FJ503047.1|1-519
NCBI	Bla|NC_003197.1.1252517|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation	gi|981191958|emb|LN999997.1|4323854-4324945 gi|973795115|gb|AE006468.2|1090875-1089784 gi|949877344|gb|CP012930.1|1091644-1090553 gi|949872475|gb|CP012924.1|1091525-1090434 gi|928084184|gb|CP012681.1|1091116-1090025 gi|821161554|gb|CP011428.1|1089131-1088040 gi|808186398|gb|CP007523.1|1822333-1821242 gi|777177758|emb|LN829401.1|1881416-1882507 gi|764057510|gb|CP007235.1|1821670-1820579 gi|674281104|gb|CP009102.1|1017102-1016011
NCBI	gi|158634583|gb|EU086834.1|betalactams|Class_D_betalactamases|OXA	gi|404429427|emb|HE793032.1|162272-161359 gi|158634583|gb|EU086834.1|1-914
CARD	MLS|NC_003098.1.933922|MLS|Macrolide_resistance_efflux_pumps|MEFA	@phgb|NC_003098|953382-954594|ARO:3000614|mefE [Streptococcus pneumoniae R6]
NCBI	MLS|NC_003098.1.933922|MLS|Macrolide_resistance_efflux_pumps|MEFA	gi|25307955|gb|AE007317.1|953383-954594 gi|116075884|gb|CP000410.1|960914-962125
ARG-ANNOT	1003|DQ267940.1|DQ267940|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA25:DQ267940:54-512:459
CARD	1003|DQ267940.1|DQ267940|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|DQ267940|53-512|ARO:3003020|dfrA25 [Salmonella enterica subsp. enterica serovar Agona]
NCBI	1003|DQ267940.1|DQ267940|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|723217885|gb|KM278200.1|175-633 gi|636631852|gb|KJ546437.1|177-635 gi|636631828|gb|KJ543559.1|175-633 gi|636631822|gb|KJ543557.1|165-623 gi|636631807|gb|KJ543552.1|161-619 gi|392316194|gb|JQ823015.1|127-585 gi|343952342|gb|JF836003.1|122-580 gi|343952340|gb|JF836002.1|122-580 gi|343952334|gb|JF835999.1|119-577 gi|343952332|gb|JF835998.1|119-577
Resfinder	1003|DQ267940.1|DQ267940|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA25_1_DQ267940
NCBI	gi|5650760|gb|AF062386.1|betalactams|Class_A_betalactamases|TEM	gi|5650760|gb|AF062386.1|AF062386|1-862
CARD	CARD|pvgb|NC_002952|1417762-1419760|ARO:3003315|Staphylococcus|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|parE|RequiresSNPConfirmation	@pvgb|NC_002952|1417762-1419760|ARO:3003315|Staphylococcus aureus parE conferring resistance to fluoroquinolones [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	CARD|pvgb|NC_002952|1417762-1419760|ARO:3003315|Staphylococcus|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|parE|RequiresSNPConfirmation	gi|49240382|emb|BX571856.1|1417763-1419761
NCBI	Rif|NC_006582.1.3201560|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|56908016|dbj|AP006627.1|169971-173513
CARD	CARD|phgb|D14532|1038-1974|ARO:3001306|ErmW|MLS|23S_rRNA_methyltransferases|ERM	@phgb|D14532|1038-1974|ARO:3001306|ErmW [Micromonospora griseorubida]
NCBI	CARD|phgb|D14532|1038-1974|ARO:3001306|ErmW|MLS|23S_rRNA_methyltransferases|ERM	gi|286053|dbj|D14532.1|MPUMYRB|1039-1975 gi|286050|dbj|D16098.1|MPUMYCG|1-88
ARG-ANNOT	Flq|QnrB44|JQ349153|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB44:JQ349153:1-680:680
CARD	Flq|QnrB44|JQ349153|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JQ349153|0-680|ARO:3002759|QnrB44 [Escherichia coli]
NCBI	Flq|QnrB44|JQ349153|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|375332210|gb|JQ349153.1|1-680
Resfinder	Flq|QnrB44|JQ349153|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB44_1_JQ349153
ARG-ANNOT	Flq|Qnr-S5|HQ631377|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	(Flq)Qnr-S5:HQ631377:1-657:657
CARD	Flq|Qnr-S5|HQ631377|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	@phgb|HQ631377|0-657|ARO:3002794|QnrS5 [Aeromonas sobria]
NCBI	Flq|Qnr-S5|HQ631377|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|695225191|ref|NG_041235.1|1-657
Resfinder	Flq|Qnr-S5|HQ631377|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	QnrS5_1_HQ631377
NCBI	1521|AF174129.3|AF174129|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|695208190|ref|NG_035493.1|1942-2721
ARG-ANNOT	Tet|Tet-38|AY825285|1-1353|1353|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET38	(Tet)Tet-38:AY825285:1-1353:1353
CARD	Tet|Tet-38|AY825285|1-1353|1353|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET38	@phgb|AY825285|0-1353|ARO:3000565|tet38 [Staphylococcus aureus]
NCBI	Tet|Tet-38|AY825285|1-1353|1353|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET38	gi|974697948|dbj|AP017320.1|150718-152070 gi|927048389|gb|CP010890.1|98847-100199 gi|925190036|gb|CP012593.1|98847-100199 gi|803444476|gb|CP011147.1|145251-146603 gi|595636499|gb|CP007454.1|1018009-1016657 gi|408436493|emb|HE579073.1|127367-128719 gi|408434508|emb|HE579071.1|127367-128719 gi|408432519|emb|HE579069.1|127488-128840 gi|408430526|emb|HE579067.1|127486-128838 gi|408428537|emb|HE579065.1|127489-128841
ARG-ANNOT	995|unknown_id|unknown_name|Tetracyclines|Tetracycline_inactivation_enzymes|TET34	(Tet)Tet-34:AB061440:306-770:465
NCBI	995|unknown_id|unknown_name|Tetracyclines|Tetracycline_inactivation_enzymes|TET34	gi|14278992|dbj|AB061440.1|770-306
NCBI	1373|GU002295.1|GU002295|betalactams|Class_B_betalactamases|POM	gi|302139992|gb|GU002295.1|97-917
Resfinder	1373|GU002295.1|GU002295|betalactams|Class_B_betalactamases|POM	POM-1_1_GU002295
ARG-ANNOT	Bla|B-8|AF189305|1-747|747|betalactams|Class_B_betalactamases|BLAB	(Bla)B-8:AF189305:1-747:747
NCBI	Bla|B-8|AF189305|1-747|747|betalactams|Class_B_betalactamases|BLAB	gi|9587069|gb|AF189305.1|AF189305|1-747
Resfinder	Bla|B-8|AF189305|1-747|747|betalactams|Class_B_betalactamases|BLAB	blaB-8_1_AF189305
ARG-ANNOT	gi|13925892|gb|AF315786.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-35:FJ957893:1271-2071:801
CARD	gi|13925892|gb|AF315786.1|betalactams|Class_D_betalactamases|OXA	@phgb|AF315786|1313-2114|ARO:3001429|OXA-35 [Pseudomonas aeruginosa]
Lahey	gi|13925892|gb|AF315786.1|betalactams|Class_D_betalactamases|OXA	AAK49460.1 AF315786.1:1314-2114
NCBI	gi|13925892|gb|AF315786.1|betalactams|Class_D_betalactamases|OXA	gi|551485248|gb|KF525327.1|402-1202 gi|237880814|gb|FJ957893.1|1271-2071 gi|13925892|gb|AF315786.1|1314-2114 gi|58003779|gb|AY866525.1|1931-2731
Resfinder	gi|13925892|gb|AF315786.1|betalactams|Class_D_betalactamases|OXA	blaOXA-35_1_AF315786
NCBI	gi|591542826|gb|KJ207202.1|betalactams|Class_C_betalactamases|CMY	gi|591542826|gb|KJ207202.1|549-1776
ARG-ANNOT	Bla|TEM-139|DQ072853|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-139:DQ072853:1-861:861
CARD	Bla|TEM-139|DQ072853|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|DQ072853|0-861|ARO:3001003|TEM-139 [Klebsiella pneumoniae]
Lahey	Bla|TEM-139|DQ072853|1-861|861|betalactams|Class_A_betalactamases|TEM	AAZ23494.1 DQ072853.1:1-861
NCBI	Bla|TEM-139|DQ072853|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|695200433|ref|NG_036133.1|1-861
Resfinder	Bla|TEM-139|DQ072853|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-139_1_DQ072853
ARG-ANNOT	Bla|OKP-B-15|AM850917|18-878|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-15:AM850917:18-878:861
CARD	Bla|OKP-B-15|AM850917|18-878|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM850917|17-878|ARO:3002439|OKP-B-6 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-15|AM850917|18-878|861|betalactams|Class_A_betalactamases|OKP	gi|197724706|emb|AM850917.2|18-878 gi|926677775|gb|CP012300.1|2632975-2633834 gi|925216839|gb|CP012252.1|201979-201120
Resfinder	Bla|OKP-B-15|AM850917|18-878|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-15_1_AM850917
CARD	Phe|M58516.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|M58516|89-719|ARO:3002670|cat [Staphylococcus aureus]
NCBI	Phe|M58516.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|152983|gb|M58516.1|STACATB|90-719
ARG-ANNOT	Bla|CTX-M-116|JF966749|158-1033|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-116:JF966749:158-1033:876
CARD	Bla|CTX-M-116|JF966749|158-1033|876|betalactams|Class_A_betalactamases|CTX	@phgb|JF966749|157-1033|ARO:3001976|CTX-M-116 [Proteus mirabilis]
Lahey	Bla|CTX-M-116|JF966749|158-1033|876|betalactams|Class_A_betalactamases|CTX	AEI70324.1 JF966749.1:158-1033
NCBI	Bla|CTX-M-116|JF966749|158-1033|876|betalactams|Class_A_betalactamases|CTX	gi|337729566|gb|JF966749.1|158-1033
Resfinder	Bla|CTX-M-116|JF966749|158-1033|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-116_1_JF966749
CARD	AGly|AY115475.1|gene3|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AY115475|2284-3076|ARO:3002601|aadA [uncultured bacterium]
NCBI	AGly|AY115475.1|gene3|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|971497538|gb|CP012902.1|76955-76164 gi|943457735|gb|KT818627.1|93752-94543 gi|943457735|gb|KT818627.1|155345-156136 gi|933686117|gb|KR827393.1|87556-88347 gi|930425888|gb|KR067579.1|2622-3413 gi|926465518|gb|KP770033.1|823-32 gi|926465501|gb|KP770031.1|800-9 gi|926465446|gb|KP770027.1|823-32 gi|926465363|gb|KP770023.1|799-8 gi|901692722|emb|LN864819.1|6991-7782 gi|823683259|emb|LN831185.1|68639-69430
NCBI	285|AF121000.1|AF121000|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|295986902|gb|HM002748.1|669-70 gi|4583389|gb|AF121000.1|AF121000|13133-13732 gi|29164981|gb|AY219860.1|1081-724 gi|29164976|gb|AY219695.1|910-553 gi|29164967|gb|AY219692.1|589-232 gi|29242917|gb|AY222825.1|3566-3209 gi|29242897|gb|AY222819.1|907-550 gi|29164940|gb|AY219684.1|3540-3250
ARG-ANNOT	Bla|TEM-104|AF516719|215-1075|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-104:AF516719:215-1075:861
CARD	Bla|TEM-104|AF516719|215-1075|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF516719|214-1075|ARO:3000967|TEM-104 [Klebsiella pneumoniae]
Lahey	Bla|TEM-104|AF516719|215-1075|861|betalactams|Class_A_betalactamases|TEM	AAM61952.1 AF516719.1:215-1075
NCBI	Bla|TEM-104|AF516719|215-1075|861|betalactams|Class_A_betalactamases|TEM	gi|21541782|gb|AF516719.1|215-1075
Resfinder	Bla|TEM-104|AF516719|215-1075|861|betalactams|Class_A_betalactamases|TEM	blaTEM-104_1_AF516719
NCBI	gi|166157193|emb|AM183304.1|betalactams|Class_A_betalactamases|TEM	gi|166157193|emb|AM183304.1|1-1091 gi|943457735|gb|KT818627.1|75115-74889 gi|943457735|gb|KT818627.1|136706-136480 gi|959195734|gb|CP013326.1|60998-60772 gi|959190351|gb|CP013324.1|110452-110226 gi|910286593|gb|CP012163.1|68956-69182 gi|902611595|gb|CP011978.1|70729-70955 gi|828971542|gb|CP011645.1|70767-70993 gi|828965729|gb|CP011639.1|9292-9066 gi|828952302|gb|CP011622.1|124460-124686 gi|828952208|gb|CP011621.1|60998-60772
CARD	CARD|phgb|S48276|478-1129|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|S48276|478-1129|ARO:3002670|cat [Vibrio anguillarum]
NCBI	CARD|phgb|S48276|478-1129|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|695212171|ref|NG_036344.1|2909-3560 gi|108741882|gb|DQ520941.1|1496-845 gi|695196867|ref|NG_034550.1|479-1130 gi|83702381|gb|DQ313686.1|1-399 gi|89280940|gb|DQ415371.1|1-389
ARG-ANNOT	Bla|FOX-6|AY034848|52-1200|1149|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-6:AY034848:52-1200:1149
NCBI	Bla|FOX-6|AY034848|52-1200|1149|betalactams|Class_C_betalactamases|FOX	gi|14626421|gb|AY034848.1|52-1200
Resfinder	Bla|FOX-6|AY034848|52-1200|1149|betalactams|Class_C_betalactamases|FOX	blaFOX-6_1_AY034848
ARG-ANNOT	149|JF769133.1|JF769133|MLS|Macrolide_phosphotransferases|MPHE	(MLS)MphE:JF769133:8777-9661:885
NCBI	149|JF769133.1|JF769133|MLS|Macrolide_phosphotransferases|MPHE	gi|356596244|gb|CP003022.1|341173-342057 gi|340007101|emb|FR751518.1|2670-3554 gi|333975538|gb|JF769133.1|8777-9661 gi|971493847|gb|CP010351.1|386132-386036
CARD	CARD|phgb|AF516719|214-1075|ARO:3000967|TEM-104|betalactams|Class_A_betalactamases|TEM	@phgb|AF516719|214-1075|ARO:3000967|TEM-104 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF516719|214-1075|ARO:3000967|TEM-104|betalactams|Class_A_betalactamases|TEM	gi|21541782|gb|AF516719.1|215-1076
CARD	CARD|phgb|X53650|320-1235|ARO:3003565|r39|betalactams|Class_D_betalactamases|R39	@phgb|X53650|320-1235|ARO:3003565|r39 beta-lactamase [Actinomadura sp. R39]
NCBI	CARD|phgb|X53650|320-1235|ARO:3003565|r39|betalactams|Class_D_betalactamases|R39	gi|58320|emb|X53650.1|321-1235
CARD	gi|544207393|gb|KF203097.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF203097|0-822|ARO:3001511|OXA-323 [Acinetobacter calcoaceticus]
Lahey	gi|544207393|gb|KF203097.1|betalactams|Class_D_betalactamases|OXA	AGW16405.1 KF203097.1:1-822
NCBI	gi|544207393|gb|KF203097.1|betalactams|Class_D_betalactamases|OXA	gi|544207393|gb|KF203097.1|1-822
Resfinder	gi|544207393|gb|KF203097.1|betalactams|Class_D_betalactamases|OXA	blaOXA-323_1_KF203097
ARG-ANNOT	126|AJ579365.1|AJ579365|MLS|23S_rRNA_methyltransferases|ERMA	(MLS)Erm33:AJ313523:163-894:732
CARD	126|AJ579365.1|AJ579365|MLS|23S_rRNA_methyltransferases|ERMA	@phgb|NC_005076|9897-10629|ARO:3000599|Erm(33) [Staphylococcus sciuri]
NCBI	126|AJ579365.1|AJ579365|MLS|23S_rRNA_methyltransferases|ERMA	gi|33352197|emb|AJ579365.1|9898-10629 gi|695208699|ref|NG_035638.1|163-894
Resfinder	126|AJ579365.1|AJ579365|MLS|23S_rRNA_methyltransferases|ERMA	erm(33)_2_AJ579365
NCBI	Bla|AY037780.1|gene1|betalactams|Class_A_betalactamases|LEN	gi|15721854|gb|AY037780.1|89-1065
CARD	8|AF173226.1|AF173226|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	@phgb|AF173226|6913-8329|ARO:3003053|smeC [Stenotrophomonas maltophilia]
NCBI	8|AF173226.1|AF173226|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	gi|5764623|gb|AF173226.1|6914-8329 gi|47933595|gb|AY359472.4|5198-5557
CARD	CARD|phgb|NC_002695|3211891-3212506|ARO:3000832|evgA|Multi-drug_resistance|MDR_regulator|EVGA	@phgb|NC_002695|3211891-3212506|ARO:3000832|evgA [Escherichia coli O157:H7 str. Sakai]
NCBI	CARD|phgb|NC_002695|3211891-3212506|ARO:3000832|evgA|Multi-drug_resistance|MDR_regulator|EVGA	gi|985000614|gb|CP014225.1|680955-681570 gi|958627747|gb|CP013253.1|931791-931176 gi|958612453|gb|CP013048.1|1772588-1771973 gi|939732440|gb|CP011343.2|2465474-2466089 gi|939731527|gb|CP011342.2|2466399-2467014 gi|937526251|gb|CP012870.1|2157901-2157286 gi|937521852|gb|CP012869.1|2157901-2157286 gi|937517453|gb|CP012868.1|2157901-2157286 gi|937297913|gb|CP012802.1|3084383-3084998 gi|932857508|emb|LN877770.1|3307485-3308100
ARG-ANNOT	Bla|SHV-28|EU441172|57-917|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-28:EU441172:57-917:861
Lahey	Bla|SHV-28|EU441172|57-917|861|betalactams|Class_A_betalactamases|SHV	ACA09611.1 EU441172.1:57-917
NCBI	Bla|SHV-28|EU441172|57-917|861|betalactams|Class_A_betalactamases|SHV	gi|167888214|gb|EU441172.1|57-917
Resfinder	Bla|SHV-28|EU441172|57-917|861|betalactams|Class_A_betalactamases|SHV	blaSHV-28_2_EU441172
NCBI	AGly|AF318077.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|940516916|dbj|LC091210.1|5147-5701 gi|940516911|dbj|LC091209.1|3811-4365 gi|765098769|dbj|LC031883.1|5968-6522 gi|13094933|gb|AF318077.1|517-1071
ARG-ANNOT	1139|JN596991.2|JN596991|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-224:JN596991:2281-3111:831
CARD	1139|JN596991.2|JN596991|betalactams|Class_D_betalactamases|OXA	@phgb|JN596991|2280-3111|ARO:3001806|OXA-224 [Pseudomonas aeruginosa]
Lahey	1139|JN596991.2|JN596991|betalactams|Class_D_betalactamases|OXA	AEQ73521.1 JN596991.2:2281-3111
NCBI	1139|JN596991.2|JN596991|betalactams|Class_D_betalactamases|OXA	gi|365269065|gb|JN596991.2|2281-3111 gi|358424803|gb|JN412067.1|1840-2670 gi|300391780|gb|HM175874.1|55-174 gi|695211314|ref|NG_036058.1|452-571 gi|9454102|gb|AF227505.1|168-287
Resfinder	1139|JN596991.2|JN596991|betalactams|Class_D_betalactamases|OXA	blaOXA-224_1_JN596991
ARG-ANNOT	AGly|Aac6-IL|Z54241|530-1051|522|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-IL:Z54241:530-1051:522
CARD	AGly|Aac6-IL|Z54241|530-1051|522|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|Z54241|529-1051|ARO:3002559|AAC(6')-Ip [Citrobacter freundii]
NCBI	AGly|Aac6-IL|Z54241|530-1051|522|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|1743002|emb|Z54241.1|530-1051
Resfinder	AGly|Aac6-IL|Z54241|530-1051|522|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Il_1_Z54241
CARD	gi|667794895|gb|KJ865754.1|betalactams|Class_D_betalactamases|OXA	@phgb|KJ865754|0-828|ARO:3001606|OXA-415 [Pseudomonas aeruginosa]
Lahey	gi|667794895|gb|KJ865754.1|betalactams|Class_D_betalactamases|OXA	AIG94927.1 KJ865754.1:1-828
NCBI	gi|667794895|gb|KJ865754.1|betalactams|Class_D_betalactamases|OXA	gi|667794895|gb|KJ865754.1|1-828
NCBI	gi|392295713|gb|JQ422054.1|betalactams|Class_D_betalactamases|OXA	gi|392295713|gb|JQ422054.1|1-966
NCBI	Bla|SHV-11_1_AY528717|betalactams|Class_A_betalactamases|SHV	gi|719628246|gb|CP009461.1|2389630-2390490 gi|562889802|gb|KF585135.1|48-908 gi|124053910|gb|EF035561.1|1-861 gi|46452171|gb|AY528717.1|575-1435
Resfinder	Bla|SHV-11_1_AY528717|betalactams|Class_A_betalactamases|SHV	blaSHV-11_1_AY528717
ARG-ANNOT	Bla|KPC-14|JX524191|396-1271|876|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-14:JX524191:396-1271:876
CARD	Bla|KPC-14|JX524191|396-1271|876|betalactams|Class_A_betalactamases|KPC	@phgb|JX524191|395-1271|ARO:3002324|KPC-14 [Klebsiella pneumoniae]
Lahey	Bla|KPC-14|JX524191|396-1271|876|betalactams|Class_A_betalactamases|KPC	AFV48348.1 JX524191.1:396-1271
NCBI	Bla|KPC-14|JX524191|396-1271|876|betalactams|Class_A_betalactamases|KPC	gi|409974861|gb|JX524191.1|396-1271
Resfinder	Bla|KPC-14|JX524191|396-1271|876|betalactams|Class_A_betalactamases|KPC	blaKPC-14_1_JX524191
CARD	Fos|fosA_13_EU487198|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	@phgb|EU487198|216-642|ARO:3002804|FosA2 [Enterobacter cloacae]
NCBI	Fos|fosA_13_EU487198|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|186470128|gb|EU487198.1|217-642
Resfinder	Fos|fosA_13_EU487198|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_13_EU487198
NCBI	ACou|NC_003098.1.934298|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|25307955|gb|AE007317.1|749887-751830 gi|116075884|gb|CP000410.1|757418-759361
CARD	Flq|QnrB68_1_KC580657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC580657|0-645|ARO:3002780|QnrB68 [Citrobacter braakii]
NCBI	Flq|QnrB68_1_KC580657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|496297325|gb|KC580657.1|1-645
Resfinder	Flq|QnrB68_1_KC580657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB68_1_KC580657
ARG-ANNOT	Bla|OKP-B-3|AM051152|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-3:AM051152:1-861:861
CARD	Bla|OKP-B-3|AM051152|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051152|0-861|ARO:3002436|OKP-B-3 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-3|AM051152|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655083|emb|AM051152.1|1-861
Resfinder	Bla|OKP-B-3|AM051152|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-3_1_AM051152
NCBI	Flq|AP010904.1|gene4|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|239794502|dbj|AP010904.1|5459-7900
NCBI	gi|157310266|emb|AM778091.1|betalactams|Class_B_betalactamases|VIM	gi|157310266|emb|AM778091.1|1-848
CARD	266|AY768531.1|AY768531|Multi-drug_resistance|Multi-drug_efflux_pumps|MACA	@phgb|AY768531|0-1179|ARO:3000533|macA [Neisseria gonorrhoeae]
NCBI	266|AY768531.1|AY768531|Multi-drug_resistance|Multi-drug_efflux_pumps|MACA	gi|870660842|gb|CP012026.1|1192179-1191001 gi|56385099|gb|AY768531.1|1-1179
ARG-ANNOT	Bla|OXY3-1|AF491278|184-1050|867|betalactams|Class_A_betalactamases|OXY	(Bla)OXY3-1:AF491278:184-1050:867
CARD	Bla|OXY3-1|AF491278|184-1050|867|betalactams|Class_A_betalactamases|OXY	@phgb|AF491278|183-1050|ARO:3002409|OXY-3-1 [Klebsiella oxytoca]
NCBI	Bla|OXY3-1|AF491278|184-1050|867|betalactams|Class_A_betalactamases|OXY	gi|23345325|gb|AF491278.1|184-1050
Resfinder	Bla|OXY3-1|AF491278|184-1050|867|betalactams|Class_A_betalactamases|OXY	blaOXY-3-1_1_AF491278
ARG-ANNOT	AGly|AadA23|AJ809407|119-898|781|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA23:AJ809407:119-898:781
CARD	AGly|AadA23|AJ809407|119-898|781|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AJ809407|118-898|ARO:3002620|aadA23 [Salmonella enterica subsp. enterica serovar Agona]
NCBI	AGly|AadA23|AJ809407|119-898|781|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|51011757|emb|AJ809407.1|119-898
Resfinder	AGly|AadA23|AJ809407|119-898|781|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA23_1_AJ809407
NCBI	Tet|tetL_9_AY081910|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	gi|19743627|gb|AY081910.1|21-1397 gi|748448277|gb|KP036966.1|6930-8305 gi|251817111|emb|FM252032.1|1066305-1067680
Resfinder	Tet|tetL_9_AY081910|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	tet(L)_9_AY081910
CARD	Bla|KF986260.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF986260|20-845|ARO:3001565|OXA-379 [Acinetobacter baumannii]
Lahey	Bla|KF986260.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30279.1 KF986260.1:21-845
NCBI	Bla|KF986260.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389155|gb|KF986260.1|21-845
ARG-ANNOT	Bla|SHV-70|DQ013287|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-70:DQ013287:1-861:861
CARD	Bla|SHV-70|DQ013287|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|DQ013287|0-861|ARO:3001124|SHV-70 [Enterobacter cloacae]
Lahey	Bla|SHV-70|DQ013287|1-861|861|betalactams|Class_A_betalactamases|SHV	AAY42633.1 DQ013287.1:1-861
NCBI	Bla|SHV-70|DQ013287|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|695211655|ref|NG_036100.1|1-861
Resfinder	Bla|SHV-70|DQ013287|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-70_1_DQ013287
ARG-ANNOT	gi|40786814|gb|AY500137.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-54:AY500137:1-798:798
CARD	gi|40786814|gb|AY500137.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY500137|0-798|ARO:3001812|OXA-54 [Shewanella oneidensis]
Lahey	gi|40786814|gb|AY500137.1|betalactams|Class_D_betalactamases|OXA	AAR89917.1 AY500137.1:1-798
NCBI	gi|40786814|gb|AY500137.1|betalactams|Class_D_betalactamases|OXA	gi|410519462|gb|AE014299.2|854515-855312 gi|40786814|gb|AY500137.1|1-798
Resfinder	gi|40786814|gb|AY500137.1|betalactams|Class_D_betalactamases|OXA	blaOXA-54_1_AY500137
Lahey	1245|LC055762.1|LC055762|betalactams|Class_B_betalactamases|IMP	BAR80870.1 LC055762.1:566-1306
NCBI	1245|LC055762.1|LC055762|betalactams|Class_B_betalactamases|IMP	gi|822885045|dbj|LC055762.1|566-1306
NCBI	Bla|SHV-1_15_FJ668804|betalactams|Class_A_betalactamases|SHV	gi|695220756|ref|NG_039549.1|77-937 gi|124053916|gb|EF035564.1|1-861
Resfinder	Bla|SHV-1_15_FJ668804|betalactams|Class_A_betalactamases|SHV	blaSHV-1_15_FJ668804
ARG-ANNOT	Bla|ACT-15|JX440356|755-1900|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-15:JX440356:755-1900:1146
CARD	Bla|ACT-15|JX440356|755-1900|1146|betalactams|Class_C_betalactamases|ACT	@phgb|JX440356|754-1900|ARO:3001837|ACT-15 [Enterobacter cloacae]
Lahey	Bla|ACT-15|JX440356|755-1900|1146|betalactams|Class_C_betalactamases|ACT	AFU25653.1 JX440356.1:755-1900
NCBI	Bla|ACT-15|JX440356|755-1900|1146|betalactams|Class_C_betalactamases|ACT	gi|407731538|gb|JX440356.1|755-1900
Resfinder	Bla|ACT-15|JX440356|755-1900|1146|betalactams|Class_C_betalactamases|ACT	blaACT-15_1_JX440356
NCBI	738|JX560992.1|JX560992|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|927930179|gb|KP998101.1|7927-8790 gi|927820524|gb|KT448822.1|8260-7397 gi|927820498|gb|KT448821.1|19741-18878 gi|927820473|gb|KT448820.1|19742-18879 gi|927820447|gb|KT448819.1|19743-18880 gi|927820421|gb|KT448818.1|19743-18880 gi|927820398|gb|KT448817.1|19741-18878 gi|927440299|emb|LN879430.1|1566877-1566014 gi|908777994|gb|KR936172.1|19741-18878 gi|818439301|gb|CP007497.1|928083-928946
Resfinder	738|JX560992.1|JX560992|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	aadE_1_KF421157
NCBI	1639|AB985401.1|AB985401|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|973585379|gb|KP054476.2|38177-37602 gi|971493847|gb|CP010351.1|174885-175460 gi|969995310|gb|KT317086.1|7646-8221 gi|969995276|gb|KT317085.1|19755-20330 gi|953271753|gb|KT175908.1|3245-3820 gi|884906146|gb|CP012007.1|102633-103208 gi|760459642|gb|KP688397.1|128838-129413 gi|749800202|gb|KP076293.1|8413-8988 gi|748952317|dbj|LC020101.1|6578-7153 gi|693581773|dbj|AP014650.1|14590-14015
ARG-ANNOT	AGly|Sat4A|X92945|38870-39412|543|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	(AGly)Sat4A:X92945:38870-39412:543
NCBI	AGly|Sat4A|X92945|38870-39412|543|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	gi|941149152|gb|CP007679.1|10690-10148 gi|938507137|gb|KP842560.1|2523-3065 gi|929858715|gb|CP010402.1|54834-55376 gi|770542082|gb|KP339868.1|13539-14081 gi|777211012|emb|LN831036.1|54318-54860 gi|749389159|gb|KJ645709.1|44838-45380 gi|745811785|gb|CP007593.1|961781-962323 gi|696158524|gb|KM281804.1|21167-21709 gi|657154530|gb|CP007447.1|2225831-2225289 gi|589294501|gb|CP007182.1|46353-46895
ARG-ANNOT	gi|338815130|gb|HQ845196.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-52:HQ845196:1-861:861
CARD	gi|338815130|gb|HQ845196.1|betalactams|Class_A_betalactamases|SHV	@phgb|HQ845196|0-861|ARO:3001109|SHV-52 [Klebsiella pneumoniae]
Lahey	gi|338815130|gb|HQ845196.1|betalactams|Class_A_betalactamases|SHV	AEJ08681.1 HQ845196.1:1-861
NCBI	gi|338815130|gb|HQ845196.1|betalactams|Class_A_betalactamases|SHV	gi|338815130|gb|HQ845196.1|1-861
Resfinder	gi|338815130|gb|HQ845196.1|betalactams|Class_A_betalactamases|SHV	blaSHV-52_1_HQ845196
NCBI	AGly|AF162771.1|gene2|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|954629879|gb|CP013215.1|281635-281040 gi|948288909|gb|KR259328.1|131-726 gi|908266278|gb|CP012170.1|140073-140668 gi|828933802|gb|CP011601.1|168898-169493 gi|826570395|gb|KR262557.1|1614-2209 gi|758852100|gb|CP010893.1|30317-29722 gi|682122704|gb|KJ668596.1|1058-1653 gi|659224503|gb|KJ668707.1|117-712 gi|300245053|gb|HM173356.1|2085-2680 gi|226426103|gb|EU855788.1|275361-274766
CARD	CARD|pvgb|NC_002952|590830-594382|ARO:3003285|Staphylococcus|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	@pvgb|NC_002952|590830-594382|ARO:3003285|Staphylococcus aureus rpoB mutants conferring resistance to rifampicin [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	CARD|pvgb|NC_002952|590830-594382|ARO:3003285|Staphylococcus|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|703576232|gb|CP009554.1|537360-540912 gi|49240382|emb|BX571856.1|590831-594383
ARG-ANNOT	301|FJ349556.1|FJ349556|Glycopeptides|VanA-type_resistance_protein|VANA	(Gly)VanA-M:FJ349556:4857-5888:1032
CARD	301|FJ349556.1|FJ349556|Glycopeptides|VanA-type_resistance_protein|VANA	@phgb|FJ349556|4856-5888|ARO:3002911|vanM [Enterococcus faecium]
NCBI	301|FJ349556.1|FJ349556|Glycopeptides|VanA-type_resistance_protein|VANA	gi|220901852|gb|FJ349556.1|4857-5888
Resfinder	301|FJ349556.1|FJ349556|Glycopeptides|VanA-type_resistance_protein|VANA	VanM_1_FJ349556
ARG-ANNOT	Bla|OKP-A-14|FJ534512|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-14:FJ534512:1-861:861
CARD	Bla|OKP-A-14|FJ534512|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|FJ534512|0-861|ARO:3002431|OKP-A-14 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-14|FJ534512|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|219958081|gb|FJ534512.1|1-861
Resfinder	Bla|OKP-A-14|FJ534512|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-14_1_FJ534512
ARG-ANNOT	Bla|CMY-2|AM779746|1-1149|1149|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-2:AM779746:1-1149:1149
NCBI	Bla|CMY-2|AM779746|1-1149|1149|betalactams|Class_C_betalactamases|CMY	gi|156138533|emb|AM779746.1|1-1146
ARG-ANNOT	518|AJ007350.1|AJ007350|betalactams|Class_A_betalactamases|ACI	(Bla)ACI-1:AJ007350:240-1094:855;(Bla)ACI1:AJ007350:240-1094:855
NCBI	518|AJ007350.1|AJ007350|betalactams|Class_A_betalactamases|ACI	gi|350278064|gb|CP003058.1|1346359-1347213 gi|5596420|emb|AJ007350.1|240-1094 gi|932120641|gb|CP009240.1|1937974-1937882
Resfinder	518|AJ007350.1|AJ007350|betalactams|Class_A_betalactamases|ACI	blaACI-1_1_AJ007350
ARG-ANNOT	gi|334145775|gb|JF795538.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-185:JF795538:1-861:861
CARD	gi|334145775|gb|JF795538.1|betalactams|Class_A_betalactamases|TEM	@phgb|JF795538|0-861|ARO:3001374|TEM-185 [Escherichia coli]
Lahey	gi|334145775|gb|JF795538.1|betalactams|Class_A_betalactamases|TEM	AEG64812.1 JF795538.1:1-861
NCBI	gi|334145775|gb|JF795538.1|betalactams|Class_A_betalactamases|TEM	gi|334145775|gb|JF795538.1|1-861
Resfinder	gi|334145775|gb|JF795538.1|betalactams|Class_A_betalactamases|TEM	blaTEM-185_1_JF795538
ARG-ANNOT	gi|81365639|gb|DQ105529.2|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-146:DQ105529:1-861:861
CARD	gi|81365639|gb|DQ105529.2|betalactams|Class_A_betalactamases|TEM	@phgb|DQ105529|0-861|ARO:3001013|TEM-146 [Escherichia coli]
Lahey	gi|81365639|gb|DQ105529.2|betalactams|Class_A_betalactamases|TEM	AAZ14084.2 DQ105529.2:1-861
NCBI	gi|81365639|gb|DQ105529.2|betalactams|Class_A_betalactamases|TEM	gi|81365639|gb|DQ105529.2|1-861
Resfinder	gi|81365639|gb|DQ105529.2|betalactams|Class_A_betalactamases|TEM	blaTEM-146_1_DQ105529
ARG-ANNOT	Bla|CTX-M-83|FJ214366|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-83:FJ214366:1-876:876
CARD	Bla|CTX-M-83|FJ214366|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|FJ214366|0-876|ARO:3001944|CTX-M-83 [Salmonella enterica subsp. enterica serovar Derby]
Lahey	Bla|CTX-M-83|FJ214366|1-876|876|betalactams|Class_A_betalactamases|CTX	ACI29345.1 FJ214366.1:1-876
NCBI	Bla|CTX-M-83|FJ214366|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|208503028|gb|FJ214366.1|1-876
Resfinder	Bla|CTX-M-83|FJ214366|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-83_1_FJ214366
ARG-ANNOT	Bla|SHV-132|GU981741|794-1654|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-132:GU981741:794-1654:861
Lahey	Bla|SHV-132|GU981741|794-1654|861|betalactams|Class_A_betalactamases|SHV	ADU15837.1 GU981741.1:1654-794
NCBI	Bla|SHV-132|GU981741|794-1654|861|betalactams|Class_A_betalactamases|SHV	gi|315419957|gb|GU981741.1|1654-794
Resfinder	Bla|SHV-132|GU981741|794-1654|861|betalactams|Class_A_betalactamases|SHV	blaSHV-132_1_GU981741
ARG-ANNOT	Bla|SHV-2a|X98102|72-934|863|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-2a:X98102:72-934:863
CARD	Bla|SHV-2a|X98102|72-934|863|betalactams|Class_A_betalactamases|SHV	@phgb|X98102|73-934|ARO:3001061|SHV-2A [Klebsiella pneumoniae]
Lahey	Bla|SHV-2a|X98102|72-934|863|betalactams|Class_A_betalactamases|SHV	CAA66730.1 X98102.1:74-934
NCBI	Bla|SHV-2a|X98102|72-934|863|betalactams|Class_A_betalactamases|SHV	gi|2113848|emb|X98102.1|74-934
Resfinder	Bla|SHV-2a|X98102|72-934|863|betalactams|Class_A_betalactamases|SHV	blaSHV-2a_13_X98102
ARG-ANNOT	Tet|TetA-P|L20800|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	(Tet)TetA-P:L20800: 1063-2325:1263
CARD	Tet|TetA-P|L20800|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	@phgb|L20800|1062-2325|ARO:3000180|tetA(P) [Clostridium perfringens]
NCBI	Tet|TetA-P|L20800|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|238481695|gb|FJ797650.1|4620-5882 gi|86450158|gb|DQ366035.1|559-1821 gi|456030|gb|L20800.1|CLOTETP|1063-2325
Resfinder	Tet|TetA-P|L20800|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tetA(P)_3_L20800
CARD	CARD|phgb|KJ020574|244-1120|ARO:3002006|CTX-M-148|betalactams|Class_A_betalactamases|CTX	@phgb|KJ020574|244-1120|ARO:3002006|CTX-M-148 [Escherichia coli]
NCBI	CARD|phgb|KJ020574|244-1120|ARO:3002006|CTX-M-148|betalactams|Class_A_betalactamases|CTX	gi|695228199|ref|NG_041751.1|245-1121
ARG-ANNOT	Bla|VIM-26|FR748153|260-1060|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-26:FR748153:260-1060:801
CARD	Bla|VIM-26|FR748153|260-1060|801|betalactams|Class_B_betalactamases|VIM	@phgb|FR748153|259-1060|ARO:3002296|VIM-26 [Klebsiella pneumoniae]
Lahey	Bla|VIM-26|FR748153|260-1060|801|betalactams|Class_B_betalactamases|VIM	CBY80143.1 FR748153.1:260-1060
NCBI	Bla|VIM-26|FR748153|260-1060|801|betalactams|Class_B_betalactamases|VIM	gi|768032383|gb|KM975295.1|596-1396 gi|315064910|emb|FR748153.1|260-1060
Resfinder	Bla|VIM-26|FR748153|260-1060|801|betalactams|Class_B_betalactamases|VIM	blaVIM-26_1_FR748153
NCBI	Bla|U14748.1|gene2|betalactams|Class_A_betalactamases|AER	gi|2992468|gb|U14748.1|AHU14748|244-1239
ARG-ANNOT	Bla|SHV-67|DQ174307|5-865|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-67:DQ174307:5-865:861
CARD	Bla|SHV-67|DQ174307|5-865|861|betalactams|Class_A_betalactamases|SHV	@phgb|DQ174307|4-865|ARO:3001122|SHV-67 [Klebsiella pneumoniae]
Lahey	Bla|SHV-67|DQ174307|5-865|861|betalactams|Class_A_betalactamases|SHV	ABA06589.1 DQ174307.1:5-865
NCBI	Bla|SHV-67|DQ174307|5-865|861|betalactams|Class_A_betalactamases|SHV	gi|74422856|gb|DQ174307.1|5-865
Resfinder	Bla|SHV-67|DQ174307|5-865|861|betalactams|Class_A_betalactamases|SHV	blaSHV-67_1_DQ174307
CARD	CARD|pvgb|AE000516|4238826-4242123|ARO:3003465|Mycobacterium|Rifampin|Rifampin-resistant_embB|embB|RequiresSNPConfirmation	@pvgb|AE000516|4238826-4242123|ARO:3003465|Mycobacterium tuberculosis embB mutants conferring resistance to rifampicin [Mycobacterium tuberculosis CDC1551]
NCBI	CARD|pvgb|AE000516|4238826-4242123|ARO:3003465|Mycobacterium|Rifampin|Rifampin-resistant_embB|embB|RequiresSNPConfirmation	gi|631902187|gb|KJ571518.1|1-3297 gi|50952454|gb|AE000516.2|4238827-4242123
ARG-ANNOT	1647|AB061794.1|AB061794|betalactams|Class_C_betalactamases|MOX	(Bla)CMY-9:AB061794:6018-7166:1149
CARD	1647|AB061794.1|AB061794|betalactams|Class_C_betalactamases|MOX	@phgb|AB061794|6017-7166|ARO:3002020|CMY-9 [Escherichia coli]
Lahey	1647|AB061794.1|AB061794|betalactams|Class_C_betalactamases|MOX	BAB72158.1 AB061794.1:6018-7166
NCBI	1647|AB061794.1|AB061794|betalactams|Class_C_betalactamases|MOX	gi|695208234|ref|NG_035502.1|6018-7166
Resfinder	1647|AB061794.1|AB061794|betalactams|Class_C_betalactamases|MOX	blaCMY-9_1_AB061794
NCBI	Flq|NC_011035.1.6447337|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|193932879|gb|CP001050.1|1051396-1054146
CARD	CARD|pvgb|BX248333|4182808-4186105|ARO:3003325|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBB|RequiresSNPConfirmation	@pvgb|BX248333|4182808-4186105|ARO:3003325|Mycobacterium bovis embB mutations conferring resistance to ethambutol [Mycobacterium bovis AF2122/97]
NCBI	CARD|pvgb|BX248333|4182808-4186105|ARO:3003325|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBB|RequiresSNPConfirmation	gi|893678627|gb|CP012095.1|4189038-4192334 gi|31742509|emb|BX248333.1|4182809-4186105 gi|690294709|gb|CP009449.1|4204681-4207977
ARG-ANNOT	1871|KC292503.1|KC292503|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-34:KC292503:4335-5195:861
CARD	1871|KC292503.1|KC292503|betalactams|Class_A_betalactamases|TEM	@phgb|KC292503|4334-5195|ARO:3000904|TEM-34 [Haemophilus parainfluenzae]
Lahey	1871|KC292503.1|KC292503|betalactams|Class_A_betalactamases|TEM	AGE11905.1 KC292503.1:4335-5195
NCBI	1871|KC292503.1|KC292503|betalactams|Class_A_betalactamases|TEM	gi|523582587|gb|KC844056.1|1-861 gi|444746817|gb|KC292503.1|4335-5195
Resfinder	1871|KC292503.1|KC292503|betalactams|Class_A_betalactamases|TEM	blaTEM-34_1_KC292503
NCBI	144|JF769133.1|JF769133|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	gi|356596244|gb|CP003022.1|336102-336731 gi|356596244|gb|CP003022.1|343814-343856 gi|333975538|gb|JF769133.1|3706-4335 gi|667483963|gb|KJ439039.1|29208-29796 gi|667483878|gb|KJ411925.1|29208-29796 gi|667695446|gb|CP008733.1|12607-12019 gi|108741875|gb|DQ520939.1|17-605
NCBI	Bac|AP009048.1|gene3103|Bacitracin|Undecaprenyl_pyrophosphate_phosphatase|BACA	gi|985000614|gb|CP014225.1|1401331-1400510 gi|974145171|gb|CP007491.1|3300008-3299187 gi|958627747|gb|CP013253.1|219202-220023 gi|939732440|gb|CP011343.2|3179203-3178382 gi|939731527|gb|CP011342.2|3179948-3179127 gi|937526251|gb|CP012870.1|1437525-1438346 gi|937521852|gb|CP012869.1|1437525-1438346 gi|937517453|gb|CP012868.1|1437525-1438346 gi|932857508|emb|LN877770.1|4028298-4027477 gi|923416119|gb|CP011113.1|3160849-3160028
NCBI	551|EU503121.1|EU503121|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|930190865|emb|LN555650.1|261113-260559 gi|930189590|emb|HG530658.1|196821-196267 gi|873463574|gb|KR106190.1|15823-15269 gi|730042884|gb|KJ571202.1|4554-5108 gi|825088700|gb|KP975077.1|106431-105877 gi|821392896|gb|KP873171.1|21087-20533 gi|768032361|gb|KM975294.1|1504-2058 gi|742797756|emb|LK054503.1|13240-13794 gi|636632016|gb|KJ579055.1|150-704 gi|635661965|gb|KJ547703.1|998-1552
CARD	Bla|OXA-353_1_KF297582|betalactams|Class_D_betalactamases|OXA	@phgb|KF297582|0-822|ARO:3001540|OXA-353 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-353_1_KF297582|betalactams|Class_D_betalactamases|OXA	AGW83451.1 KF297582.1:1-822
NCBI	Bla|OXA-353_1_KF297582|betalactams|Class_D_betalactamases|OXA	gi|546237217|gb|KF297582.1|1-822
Resfinder	Bla|OXA-353_1_KF297582|betalactams|Class_D_betalactamases|OXA	blaOXA-353_1_KF297582
CARD	CARD|phgb|M55426|465-1326|ARO:3002542|AAC3-VIIIa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|M55426|465-1326|ARO:3002542|AAC(3)-VIIIa [Streptomyces fradiae]
NCBI	CARD|phgb|M55426|465-1326|ARO:3002542|AAC3-VIIIa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|153135|gb|M55426.1|STMAACC8|466-1327
Lahey	gi|728678245|gb|KP081315.1|betalactams|Class_A_betalactamases|IMI	AIY69088.1 KP081315.1:1-879
NCBI	gi|728678245|gb|KP081315.1|betalactams|Class_A_betalactamases|IMI	gi|728678245|gb|KP081315.1|1-879
NCBI	Tet|tet31_1_GQ283908|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET31	gi|915642179|gb|CP012365.1|755197-753965 gi|256260251|gb|GQ283908.1|4089-5321
Resfinder	Tet|tet31_1_GQ283908|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET31	tet(31)_1_GQ283908
ARG-ANNOT	Bla|TEM-96|AY092401|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-96:AY092401:1-861:861
CARD	Bla|TEM-96|AY092401|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY092401|0-861|ARO:3000963|TEM-96 [Escherichia coli]
Lahey	Bla|TEM-96|AY092401|1-861|861|betalactams|Class_A_betalactamases|TEM	AAM22276.1 AY092401.1:1-861
NCBI	Bla|TEM-96|AY092401|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|20530258|gb|AY092401.1|1-861
Resfinder	Bla|TEM-96|AY092401|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-96_1_AY092401
NCBI	Phe|BX664015.1|gene104|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|825088700|gb|KP975077.1|46940-46281 gi|723228927|gb|CP009857.1|4541-3882 gi|723224425|gb|CP009852.1|32471-33130 gi|640855748|gb|CP007733.1|62273-62932 gi|150958513|gb|CP000650.1|66898-66239 gi|38259307|emb|BX664015.1|101974-101315
CARD	CARD|phgb|NC_010410|3660736-3661636|ARO:3002370|VEB-1|betalactams|Class_A_betalactamases|VEB	@phgb|NC_010410|3660736-3661636|ARO:3002370|VEB-1 [Acinetobacter baumannii AYE]
NCBI	CARD|phgb|NC_010410|3660736-3661636|ARO:3002370|VEB-1|betalactams|Class_A_betalactamases|VEB	gi|695226212|ref|NG_041455.1|4921-4021 gi|695226656|ref|NG_041554.1|4130-3230 gi|260677483|gb|GQ388247.1|7360-6460 gi|169147133|emb|CU459141.1|3660737-3661637 gi|88702677|gb|DQ393569.1|2854-1954 gi|45359798|gb|AY536743.1|2525-1625 gi|12655809|gb|AF220758.1|AF220758|946-46 gi|695200081|ref|NG_035375.1|4452-3552 gi|4102199|gb|AF010416.1|AF010416|1063-163 gi|3764091|gb|AF078527.1|AF078527|3625-2725
CARD	1014|AF001493.1|AF001493|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	@phgb|AF001493|0-432|ARO:3002846|arr-1 [Mycobacterium smegmatis]
NCBI	1014|AF001493.1|AF001493|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|777214100|emb|LN831039.1|1318958-1319389 gi|2967655|gb|AF001493.1|356-787
ARG-ANNOT	Bla|Mor-2|AY235804|110-1249|1140|betalactams|Class_C_betalactamases|DHA	(Bla)Mor-2:AY235804:110-1249:1140
NCBI	Bla|Mor-2|AY235804|110-1249|1140|betalactams|Class_C_betalactamases|DHA	gi|29569154|gb|AY235804.1|110-1249
Resfinder	Bla|Mor-2|AY235804|110-1249|1140|betalactams|Class_C_betalactamases|DHA	blaMOR-2_1_AY235804
ARG-ANNOT	Bla|TEM-88|AY027590|113-973|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-88:AY027590:113-973:861
CARD	Bla|TEM-88|AY027590|113-973|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY027590|112-973|ARO:3000955|TEM-88 [Klebsiella pneumoniae]
Lahey	Bla|TEM-88|AY027590|113-973|861|betalactams|Class_A_betalactamases|TEM	AAK14792.1 AY027590.1:113-973
NCBI	Bla|TEM-88|AY027590|113-973|861|betalactams|Class_A_betalactamases|TEM	gi|695200248|ref|NG_035413.1|113-973
Resfinder	Bla|TEM-88|AY027590|113-973|861|betalactams|Class_A_betalactamases|TEM	blaTEM-88_1_AY027590
CARD	MLS|ermC_10_Y09002|MLS|23S_rRNA_methyltransferases|ERMC	@phgb|Y09002|57-792|ARO:3000250|ErmC [Staphylococcus haemolyticus]
NCBI	MLS|ermC_10_Y09002|MLS|23S_rRNA_methyltransferases|ERMC	gi|695198036|ref|NG_034885.1|58-792 gi|353127779|gb|JF968533.1|150-197
Resfinder	MLS|ermC_10_Y09002|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_10_Y09002
CARD	CARD|pvgb|NC_020418|545199-547614|ARO:3003306|Morganella|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	@pvgb|NC_020418|545199-547614|ARO:3003306|Morganella morganii gyrB conferring resistance to fluoroquinolone [Morganella morganii subsp. morganii KT]
NCBI	CARD|pvgb|NC_020418|545199-547614|ARO:3003306|Morganella|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	gi|455418716|gb|CP004345.1|545200-547615 gi|302746261|gb|HM122060.1|1164-1
ARG-ANNOT	Phe|CatA7|M64281|208-855|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)CatA7:M64281:208-855:648
CARD	Phe|CatA7|M64281|208-855|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|M64281|0-648|ARO:3002670|cat [Staphylococcus intermedius]
NCBI	Phe|CatA7|M64281|208-855|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|152986|gb|M64281.1|STACLACTYL|208-855
ARG-ANNOT	gi|194022466|gb|EU815939.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-163:EU815939:1-861:861
CARD	gi|194022466|gb|EU815939.1|betalactams|Class_A_betalactamases|TEM	@phgb|EU815939|0-861|ARO:3001029|TEM-163 [Escherichia coli]
Lahey	gi|194022466|gb|EU815939.1|betalactams|Class_A_betalactamases|TEM	ACF32746.1 EU815939.1:1-861
NCBI	gi|194022466|gb|EU815939.1|betalactams|Class_A_betalactamases|TEM	gi|194022466|gb|EU815939.1|1-861
Resfinder	gi|194022466|gb|EU815939.1|betalactams|Class_A_betalactamases|TEM	blaTEM-163_1_EU815939
CARD	Elf|CP004022.1|gene3277|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP004022|3579497-3580682|ARO:3001312|elfamycin resistant EF-Tu [Proteus mirabilis BB2000]
NCBI	Elf|CP004022.1|gene3277|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|529186758|gb|CP004022.1|3579498-3580682
ARG-ANNOT	260|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	(Tet)Tet-41:AY264780:1825-3006:1182
NCBI	260|unknown_id|unknown_name|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|117380087|gb|AY264780.2|3006-1825
ARG-ANNOT	Bla|SHV-30|AY661885|49-909|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-30:AY661885:49-909:861
CARD	Bla|SHV-30|AY661885|49-909|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY661885|48-909|ARO:3001088|SHV-30 [Enterobacter cloacae]
Lahey	Bla|SHV-30|AY661885|49-909|861|betalactams|Class_A_betalactamases|SHV	AAT75225.1 AY661885.1:49-909
NCBI	Bla|SHV-30|AY661885|49-909|861|betalactams|Class_A_betalactamases|SHV	gi|828982914|gb|CP011656.1|56532-57392 gi|828965798|gb|CP011640.1|21109-21969 gi|828958653|gb|CP011632.1|57041-57901 gi|828945263|gb|CP011614.1|45611-46471 gi|828939458|gb|CP011609.1|21460-22320 gi|828933472|gb|CP011599.1|56057-56917 gi|695210936|ref|NG_035980.1|49-909 gi|14532426|gb|AY036620.1|53-88
Resfinder	Bla|SHV-30|AY661885|49-909|861|betalactams|Class_A_betalactamases|SHV	blaSHV-30_1_AY661885
NCBI	Flq|CP000034.1|gene2423|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|558570689|gb|CP006736.1|2179279-2176652 gi|81239530|gb|CP000034.1|2222984-2220357
ARG-ANNOT	Bla|TEM-131|AY436361|132-992|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-131:AY436361:132-992:861
CARD	Bla|TEM-131|AY436361|132-992|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY436361|131-992|ARO:3000995|TEM-131 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	Bla|TEM-131|AY436361|132-992|861|betalactams|Class_A_betalactamases|TEM	AAR10958.1 AY436361.1:132-992
NCBI	Bla|TEM-131|AY436361|132-992|861|betalactams|Class_A_betalactamases|TEM	gi|38098484|gb|AY436361.1|132-992
Resfinder	Bla|TEM-131|AY436361|132-992|861|betalactams|Class_A_betalactamases|TEM	blaTEM-131_1_AY436361
NCBI	Flq|NC_010611.6237080|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|183207914|gb|CP000863.1|240839-243058
CARD	MLS|ermB_2_K00551|MLS|23S_rRNA_methyltransferases|ERMB	@phgb|K00551|317-1055|ARO:3000375|ErmB [Plasmid pAM77]
NCBI	MLS|ermB_2_K00551|MLS|23S_rRNA_methyltransferases|ERMB	gi|150490|gb|K00551.1|PA7MLSR|318-1055
Resfinder	MLS|ermB_2_K00551|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_2_K00551
NCBI	Sul|sul1_18_AY260546|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695200407|ref|NG_036125.1|2994-3833 gi|695211628|ref|NG_036097.1|7756-8595 gi|974751547|gb|KU130294.1|233473-234001 gi|982189197|gb|CP013993.1|5430539-5431065
Resfinder	Sul|sul1_18_AY260546|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_18_AY260546
ARG-ANNOT	Bla|OXA-58|AY665723|3301-4143|843|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-58:AY665723:3301-4143:843
CARD	Bla|OXA-58|AY665723|3301-4143|843|betalactams|Class_D_betalactamases|OXA	@phgb|NC_010605|13383-14226|ARO:3001611|OXA-58 [Acinetobacter baumannii ACICU]
Lahey	Bla|OXA-58|AY665723|3301-4143|843|betalactams|Class_D_betalactamases|OXA	AAW57529.1 AY665723.1:4143-3301
NCBI	Bla|OXA-58|AY665723|3301-4143|843|betalactams|Class_D_betalactamases|OXA	gi|971493847|gb|CP010351.1|396834-395992 gi|827342761|gb|KR055667.1|2625-3467 gi|442769248|gb|JX101647.1|57411-56569 gi|544205277|gb|KF208466.1|1670-2512 gi|522376232|gb|CP003848.1|47978-48820 gi|443429742|gb|KC004135.1|48-890 gi|441494717|gb|JX968506.1|1503-661 gi|695226605|ref|NG_041543.1|1556-2398 gi|695226596|ref|NG_041542.1|3700-4542 gi|695226589|ref|NG_041541.1|1977-2819
Resfinder	Bla|OXA-58|AY665723|3301-4143|843|betalactams|Class_D_betalactamases|OXA	blaOXA-58_1_AY665723
CARD	CARD|pvgb|NC_007779|986315-987404|ARO:3003390|Escherichia|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation	@pvgb|NC_007779|986315-987404|ARO:3003390|Escherichia coli ompF mutants [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|pvgb|NC_007779|986315-987404|ARO:3003390|Escherichia|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|3824637-3825726 gi|984297099|gb|CP014197.1|2922727-2921638 gi|974145171|gb|CP007491.1|1031937-1033026 gi|958627747|gb|CP013253.1|2478463-2477374 gi|950873647|gb|CP013112.1|511425-512514 gi|944404559|gb|CP013029.1|1501350-1502439 gi|939732440|gb|CP011343.2|984554-985643 gi|939731527|gb|CP011342.2|985063-986152 gi|937526251|gb|CP012870.1|3655781-3654692 gi|937521852|gb|CP012869.1|3655782-3654693
NCBI	Bla|SHV-1_12_AY787643|betalactams|Class_A_betalactamases|SHV	gi|54661907|gb|AY787643.1|1-861
Resfinder	Bla|SHV-1_12_AY787643|betalactams|Class_A_betalactamases|SHV	blaSHV-1_12_AY787643
ARG-ANNOT	gi|125658581|gb|EF373969.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-93:EF373969:1-861:861
CARD	gi|125658581|gb|EF373969.1|betalactams|Class_A_betalactamases|SHV	@phgb|EF373969|0-861|ARO:3001145|SHV-93 [Klebsiella pneumoniae]
Lahey	gi|125658581|gb|EF373969.1|betalactams|Class_A_betalactamases|SHV	ABN49110.1 EF373969.1:1-861
NCBI	gi|125658581|gb|EF373969.1|betalactams|Class_A_betalactamases|SHV	gi|125658581|gb|EF373969.1|1-861
Resfinder	gi|125658581|gb|EF373969.1|betalactams|Class_A_betalactamases|SHV	blaSHV-93_1_EF373969
NCBI	Mdr|CP003248.2|gene3393|Multi-drug_resistance|MDR_regulator|MTRA	gi|984994143|gb|CP010340.1|3644231-3643545 gi|984989958|gb|CP010339.1|3626563-3625877 gi|984985728|gb|CP010338.1|3617932-3617246 gi|984981517|gb|CP010337.1|3634956-3634270 gi|984976917|gb|CP010336.1|3612763-3612077 gi|984972452|gb|CP010335.1|3622429-3621743 gi|984967653|gb|CP010334.1|3603816-3603130 gi|984963331|gb|CP010333.1|3618149-3617463 gi|984959134|gb|CP010332.1|3578123-3577437 gi|984950177|gb|CP010330.1|3635160-3634474
ARG-ANNOT	Gly|VanH-B|AF192329|27871-28842|972|Glycopeptides|VanB-type_resistance_protein|VANHB	(Gly)VanH-B:AF192329:27871-28842:972
NCBI	Gly|VanH-B|AF192329|27871-28842|972|Glycopeptides|VanB-type_resistance_protein|VANHB	gi|695199646|ref|NG_035288.1|27871-28842
Resfinder	Gly|VanH-B|AF192329|27871-28842|972|Glycopeptides|VanB-type_resistance_protein|VANHB	VanH-B_1_AF192329
Lahey	1903|unknown_id|unknown_name|betalactams|Class_A_betalactamases|TEM	AAB59737.1 J01749.1:4153-3293
NCBI	1903|unknown_id|unknown_name|betalactams|Class_A_betalactamases|TEM	gi|973743069|gb|KT894025.1|2444-3304 gi|972295628|gb|KU055483.1|3687-2827 gi|970697516|gb|KT935445.1|6354-7214 gi|943457735|gb|KT818627.1|71860-71000 gi|943457735|gb|KT818627.1|133451-132591 gi|963885527|gb|KT351864.1|5169-6029 gi|959195734|gb|CP013326.1|57743-56883 gi|959190351|gb|CP013324.1|107197-106337 gi|948549813|dbj|LC094340.1|8392-7532 gi|948549806|dbj|LC094339.1|8014-7154 gi|948549800|dbj|LC094338.1|4957-4097
Resfinder	1903|unknown_id|unknown_name|betalactams|Class_A_betalactamases|TEM	blaTEM-1A_4_HM749966
CARD	CARD|phgb|KF443075|0-645|ARO:3002785|QnrB73|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KF443075|0-645|ARO:3002785|QnrB73 [Citrobacter freundii]
NCBI	CARD|phgb|KF443075|0-645|ARO:3002785|QnrB73|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|531874232|gb|KF443075.1|1-645 gi|805300653|gb|KP339264.1|181-824
ARG-ANNOT	1755|JN676230.2|JN676230|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-32:JN676230:1550-2350:801
CARD	1755|JN676230.2|JN676230|betalactams|Class_B_betalactamases|VIM	@phgb|JN676230|1549-2350|ARO:3002302|VIM-32 [Klebsiella oxytoca]
Lahey	1755|JN676230.2|JN676230|betalactams|Class_B_betalactamases|VIM	AEZ49857.1 JN676230.2:1550-2350
NCBI	1755|JN676230.2|JN676230|betalactams|Class_B_betalactamases|VIM	gi|389656440|gb|JN676230.2|1550-2350
Resfinder	1755|JN676230.2|JN676230|betalactams|Class_B_betalactamases|VIM	blaVIM-32_1_JN676230
ARG-ANNOT	Bla|FONA-2|AJ251240|1054-1941|888|betalactams|Class_A_betalactamases|FONA	(Bla)FONA-2:AJ251240:1054-1941:888
NCBI	Bla|FONA-2|AJ251240|1054-1941|888|betalactams|Class_A_betalactamases|FONA	gi|6468738|emb|AJ251240.1|1054-1941 gi|557668474|gb|KF484069.1|1-477
Resfinder	Bla|FONA-2|AJ251240|1054-1941|888|betalactams|Class_A_betalactamases|FONA	blaFONA-2_1_AJ251240
ARG-ANNOT	gi|401871154|gb|JX121115.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-148:JX121115:1-858:858
CARD	gi|401871154|gb|JX121115.1|betalactams|Class_A_betalactamases|SHV	@phgb|JX121115|0-858|ARO:3001187|SHV-148 [Klebsiella pneumoniae]
Lahey	gi|401871154|gb|JX121115.1|betalactams|Class_A_betalactamases|SHV	AFQ23954.1 JX121115.1:1-858
NCBI	gi|401871154|gb|JX121115.1|betalactams|Class_A_betalactamases|SHV	gi|401871154|gb|JX121115.1|1-858 gi|723234405|gb|CP009863.1|2580841-2579986 gi|695220766|ref|NG_039554.1|77-932 gi|221149257|gb|EU418908.1|1-856 gi|2113852|emb|X98099.1|74-929 gi|161703204|gb|EU280315.1|2-856
Resfinder	gi|401871154|gb|JX121115.1|betalactams|Class_A_betalactamases|SHV	blaSHV-148_1_JX121115
ARG-ANNOT	Bla|CTX-M-123|JN790864|239-1114|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-123:JN790864:239-1114:876
CARD	Bla|CTX-M-123|JN790864|239-1114|876|betalactams|Class_A_betalactamases|CTX	@phgb|JN790864|238-1114|ARO:3001982|CTX-M-123 [Escherichia coli]
Lahey	Bla|CTX-M-123|JN790864|239-1114|876|betalactams|Class_A_betalactamases|CTX	AFA51701.1 JN790864.1:239-1114
NCBI	Bla|CTX-M-123|JN790864|239-1114|876|betalactams|Class_A_betalactamases|CTX	gi|768457552|gb|KJ125070.2|25808-26683 gi|756420160|gb|KP198616.1|25796-26671 gi|675274559|gb|KJ871006.1|1-876 gi|449331660|gb|KC160505.1|772-1647 gi|375313996|gb|JN790864.1|239-1114
Resfinder	Bla|CTX-M-123|JN790864|239-1114|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-123_1_JN790864
CARD	Bla|OXA_356_1_KF297585|betalactams|Class_D_betalactamases|OXA	@phgb|KF297585|0-831|ARO:3001543|OXA-356 [Acinetobacter bereziniae]
Lahey	Bla|OXA_356_1_KF297585|betalactams|Class_D_betalactamases|OXA	AGW83454.1 KF297585.1:1-831
NCBI	Bla|OXA_356_1_KF297585|betalactams|Class_D_betalactamases|OXA	gi|546237223|gb|KF297585.1|1-831
Resfinder	Bla|OXA_356_1_KF297585|betalactams|Class_D_betalactamases|OXA	blaOXA-356_1_KF297585
ARG-ANNOT	AGly|AadA4|AY138986|1-798|789|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA4:AY138986:1-798:789
NCBI	AGly|AadA4|AY138986|1-798|789|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|5565935|emb|Z50802.3|1306-2094
Resfinder	AGly|AadA4|AY138986|1-798|789|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA4_1_Z50802
NCBI	gi|74422852|gb|DQ174305.1|betalactams|Class_A_betalactamases|SHV	gi|74422852|gb|DQ174305.1|1-865
ARG-ANNOT	Bla|HERA-3|AF398335|1-873|873|betalactams|Class_A_betalactamases|HERA	(Bla)HERA-3:AF398335:1-873:873
NCBI	Bla|HERA-3|AF398335|1-873|873|betalactams|Class_A_betalactamases|HERA	gi|16589042|gb|AF398335.1|1-873
Resfinder	Bla|HERA-3|AF398335|1-873|873|betalactams|Class_A_betalactamases|HERA	blaHERA-3_1_AF398335
ARG-ANNOT	AGly|AadA13|AY713504|1-798|798|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA13:AY713504:1-798:798
CARD	AGly|AadA13|AY713504|1-798|798|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|NG_036525|633-1431|ARO:3002613|aadA13 [Pseudomonas aeruginosa]
NCBI	AGly|AadA13|AY713504|1-798|798|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|667671718|gb|KF468749.1|1535-2332 gi|667671714|gb|KF468748.1|1523-2320 gi|667671697|gb|KF468743.1|2153-2950 gi|551485251|gb|KF525328.1|386-1183 gi|402748691|gb|JX195556.1|99-896 gi|383216584|gb|JQ407409.1|2751-3548 gi|359743183|gb|JN106164.1|22631-23428 gi|355336852|gb|JN118546.1|736-1533 gi|351214313|gb|HQ170513.2|3173-3970 gi|300391784|gb|HM175875.1|703-1500
Resfinder	AGly|AadA13|AY713504|1-798|798|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA13_1_AY713504
ARG-ANNOT	Bla|OXA-68|AY750910|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-68:AY750910:1-825:825
CARD	Bla|OXA-68|AY750910|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|AY750910|0-825|ARO:3001616|OXA-68 [Acinetobacter baumannii]
Lahey	Bla|OXA-68|AY750910|1-825|825|betalactams|Class_D_betalactamases|OXA	AAW81339.1 AY750910.1:1-825
NCBI	Bla|OXA-68|AY750910|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|884902522|gb|CP012006.1|2197894-2198718 gi|725881250|gb|CP007712.1|2469013-2468189 gi|522368383|gb|CP003847.1|1832254-1831430 gi|58701173|gb|AY750910.1|1-825
Resfinder	Bla|OXA-68|AY750910|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-68_1_AY750910
ARG-ANNOT	Bla|B-10|AY348325|1-747|747|betalactams|Class_B_betalactamases|BLAB	(Bla)B-10:AY348325:1-747:747
NCBI	Bla|B-10|AY348325|1-747|747|betalactams|Class_B_betalactamases|BLAB	gi|33772769|gb|AY348325.1|1-747
Resfinder	Bla|B-10|AY348325|1-747|747|betalactams|Class_B_betalactamases|BLAB	blaB-10_1_AY348325
ARG-ANNOT	Flq|QnrB34|JN173056|36-683|648|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB34:JN173056:36-683:648
CARD	Flq|QnrB34|JN173056|36-683|648|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN173056|35-683|ARO:3002749|QnrB34 [Citrobacter werkmanii]
NCBI	Flq|QnrB34|JN173056|36-683|648|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|341873890|gb|JN173056.1|36-683
Resfinder	Flq|QnrB34|JN173056|36-683|648|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB34_1_JN173056
NCBI	AGly|AJ809407.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|51011757|emb|AJ809407.1|107-898
ARG-ANNOT	Bla|CMY-65|JN714479|1041-2186|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-65:JN714479:1041-2186:1146
NCBI	Bla|CMY-65|JN714479|1041-2186|1146|betalactams|Class_C_betalactamases|CMY	gi|374414417|gb|JN714479.1|1041-2186
CARD	MLS|ermF_3_M17808|MLS|23S_rRNA_methyltransferases|ERMF	@phgb|M17808|1203-2004|ARO:3000498|ErmF [Bacteroides fragilis]
NCBI	MLS|ermF_3_M17808|MLS|23S_rRNA_methyltransferases|ERMF	gi|859808334|gb|KP265716.1|678-1478 gi|859808332|gb|KP265715.1|597-1397 gi|859808330|gb|KP265714.1|620-1420 gi|669174530|dbj|AB775804.1|198-998 gi|669174522|dbj|AB775653.1|4817-5617 gi|695196793|ref|NG_034522.1|1204-2004 gi|6979873|gb|AF219231.1|AF219231|293-1093
Resfinder	MLS|ermF_3_M17808|MLS|23S_rRNA_methyltransferases|ERMF	erm(F)_3_M17808
CARD	gi|717007360|gb|KM998962.1|betalactams|Class_A_betalactamases|TEM	@phgb|KM998962|0-861|ARO:3003153|SHV-186 [Neisseria gonorrhoeae]
Lahey	gi|717007360|gb|KM998962.1|betalactams|Class_A_betalactamases|TEM	AIW68620.1 KM998962.1:1-861
NCBI	gi|717007360|gb|KM998962.1|betalactams|Class_A_betalactamases|TEM	gi|717007360|gb|KM998962.1|1-861
ARG-ANNOT	Tmt|DfrA5|X12868|1306-1779|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA5:X12868:1306-1779:474
CARD	Tmt|DfrA5|X12868|1306-1779|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|DQ278190|0-474|ARO:3002861|dfrA5 [Salmonella enterica subsp. enterica serovar Enteritidis]
NCBI	Tmt|DfrA5|X12868|1306-1779|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|970567967|dbj|LC107422.1|121-594 gi|943496808|gb|KR952343.1|597-124 gi|943496804|gb|KR952341.1|595-122 gi|806638983|gb|KM972590.1|1188-1661 gi|926485056|gb|CP012636.1|81465-81938 gi|828965729|gb|CP011639.1|41635-41162 gi|817373828|gb|KP398867.1|25328-25801 gi|730910660|gb|KM921776.1|50077-50550 gi|701224693|gb|KF914304.1|102-575 gi|701224691|gb|KF914303.1|106-579
Resfinder	Tmt|DfrA5|X12868|1306-1779|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA5_1_X12868
CARD	Bla|OXA-50_3_AY306130|betalactams|Class_D_betalactamases|OXA	@phgb|AY306130|0-789|ARO:3001796|OXA-50 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-50_3_AY306130|betalactams|Class_D_betalactamases|OXA	AAQ76277.1 AY306130.1:1-789
NCBI	Bla|OXA-50_3_AY306130|betalactams|Class_D_betalactamases|OXA	gi|974353108|gb|CP008870.1|6052527-6053315 gi|974261848|gb|CP008858.1|5387772-5386984 gi|514245605|gb|CP006245.1|6283661-6284449 gi|34591642|gb|AY306130.1|1-789
Resfinder	Bla|OXA-50_3_AY306130|betalactams|Class_D_betalactamases|OXA	blaOXA-50_3_AY306130
ARG-ANNOT	gi|218091989|emb|AM922308.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-107:AM941848:1-861:861
CARD	gi|218091989|emb|AM922308.1|betalactams|Class_A_betalactamases|SHV	@phgb|AM941848|0-861|ARO:3001156|SHV-107 [Klebsiella pneumoniae]
Lahey	gi|218091989|emb|AM922308.1|betalactams|Class_A_betalactamases|SHV	CAP58291.1 AM922308.1:1-861
NCBI	gi|218091989|emb|AM922308.1|betalactams|Class_A_betalactamases|SHV	gi|218091989|emb|AM922308.1|1-861
Resfinder	gi|218091989|emb|AM922308.1|betalactams|Class_A_betalactamases|SHV	blaSHV-107_1_AM922308
ARG-ANNOT	201|EU523697.1|EU523697|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	(Tet)Tet-42:EU523697:687-1973:1287
CARD	201|EU523697.1|EU523697|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	@phgb|EU523697|686-1973|ARO:3000572|tet42 [Micrococcus sp. SMCC G887]
NCBI	201|EU523697.1|EU523697|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|187763215|gb|EU523697.1|687-1973
Resfinder	201|EU523697.1|EU523697|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tet(42)_1_EU523697
NCBI	Tmt|AJ605332.1|gene1|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|695210938|ref|NG_035982.1|1292-1813
CARD	CARD|pvgb|U00096|3163714-3165973|ARO:3003308|Escherichia|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	@pvgb|U00096|3163714-3165973|ARO:3003308|Escherichia coli parC conferring resistance to fluoroquinolone [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|pvgb|U00096|3163714-3165973|ARO:3003308|Escherichia|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|1360915-1363174 gi|958627747|gb|CP013253.1|259616-257357 gi|939732440|gb|CP011343.2|3138787-3141046 gi|939731527|gb|CP011342.2|3139532-3141791 gi|937526251|gb|CP012870.1|1477941-1475682 gi|937521852|gb|CP012869.1|1477941-1475682 gi|937517453|gb|CP012868.1|1477941-1475682 gi|932857508|emb|LN877770.1|3988047-3990306 gi|923416119|gb|CP011113.1|3120433-3122692 gi|899729770|gb|CP012127.1|3138161-3140420
ARG-ANNOT	562|AF064820.3|AF064820|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-22:AF064820:952-1776:825
CARD	562|AF064820.3|AF064820|betalactams|Class_D_betalactamases|OXA	@phgb|AF064820|951-1776|ARO:3001417|OXA-22 [Ralstonia pickettii]
Lahey	562|AF064820.3|AF064820|betalactams|Class_D_betalactamases|OXA	AAD12233.1 AF064820.3:952-1776
NCBI	562|AF064820.3|AF064820|betalactams|Class_D_betalactamases|OXA	gi|124431496|gb|AF064820.3|952-1776 gi|670934364|gb|CP006587.1|544114-544087
Resfinder	562|AF064820.3|AF064820|betalactams|Class_D_betalactamases|OXA	blaOXA-22_1_AF064820
NCBI	gi|208431881|gb|FJ194494.1|betalactams|Class_D_betalactamases|OXA	gi|208431881|gb|FJ194494.1|1-1020
NCBI	gi|7381164|gb|AF135373.1|betalactams|Class_A_betalactamases|CARB	gi|7381164|gb|AF135373.1|AF135373|1-912
NCBI	Bla|CTX-M-15_64_FJ815288|betalactams|Class_A_betalactamases|CTX	gi|225579719|gb|FJ815279.1|4-879 gi|225579691|gb|FJ815265.1|1-876
Resfinder	Bla|CTX-M-15_64_FJ815288|betalactams|Class_A_betalactamases|CTX	blaCTX-M-15_64_FJ815288
ARG-ANNOT	Bla|IMP-14|AY553332|114-854|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-14:AY553332:114-854:741
CARD	Bla|IMP-14|AY553332|114-854|741|betalactams|Class_B_betalactamases|IMP	@phgb|AY553332|113-854|ARO:3002205|IMP-14 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-14|AY553332|114-854|741|betalactams|Class_B_betalactamases|IMP	AAT49068.1 AY553332.1:114-854
NCBI	Bla|IMP-14|AY553332|114-854|741|betalactams|Class_B_betalactamases|IMP	gi|62736339|gb|AY553332.1|114-854
Resfinder	Bla|IMP-14|AY553332|114-854|741|betalactams|Class_B_betalactamases|IMP	blaIMP-14_1_AY553332
CARD	CARD|phgb|NC_002951|1987719-1989456|ARO:3000489|sav1866|Multi-drug_resistance|Multi-drug_efflux_pumps|SAV1866	@phgb|NC_002951|1987719-1989456|ARO:3000489|sav1866 [Staphylococcus aureus subsp. aureus COL]
NCBI	CARD|phgb|NC_002951|1987719-1989456|ARO:3000489|sav1866|Multi-drug_resistance|Multi-drug_efflux_pumps|SAV1866	gi|941146344|gb|CP007676.1|1978511-1980248 gi|941142962|gb|CP007672.1|1977781-1979518 gi|941139768|gb|CP007657.1|1968022-1969759 gi|899756207|gb|CP012119.1|2833000-2831263 gi|899750970|gb|CP012120.1|1812976-1811239 gi|828444881|gb|CP007670.1|1990083-1991820 gi|827440804|gb|CP011526.1|1930916-1932653 gi|777226173|emb|LN831049.1|1523683-1521946 gi|743649775|gb|CP010300.1|2008364-2010101 gi|743624649|gb|CP010299.1|2008377-2010114
ARG-ANNOT	Phe|CatB4|EU935739|59054-59602|549|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	(Phe)CatB4:EU935739:59054-59602:549
NCBI	Phe|CatB4|EU935739|59054-59602|549|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|970698242|gb|KT988020.1|11709-11161 gi|970698242|gb|KT988020.1|6043-6149 gi|970698242|gb|KT988020.1|13454-13560 gi|970698242|gb|KT988020.1|18678-18572 gi|970698093|gb|KT988018.1|9597-9049 gi|970698093|gb|KT988018.1|3931-4037 gi|970698093|gb|KT988018.1|11342-11448 gi|970698093|gb|KT988018.1|52445-52339 gi|970698093|gb|KT988018.1|100337-100231 gi|970698093|gb|KT988018.1|111164-111058 gi|973710347|gb|CP013833.1|70096-70644 gi|973710347|gb|CP013833.1|59562-59455 gi|973710347|gb|CP013833.1|99739-99846 gi|973710347|gb|CP013833.1|68351-68245 gi|973710347|gb|CP013833.1|78156-78262 gi|973710347|gb|CP013833.1|88983-89089 gi|971339514|gb|CP006662.2|39809-40357 gi|971339514|gb|CP006662.2|33133-33026 gi|971339514|gb|CP006662.2|20998-21104 gi|971339514|gb|CP006662.2|38064-37958 gi|971339514|gb|CP006662.2|43671-43777 gi|971339514|gb|CP006662.2|84341-84447 gi|966626646|gb|CP013657.1|132451-132999 gi|966626646|gb|CP013657.1|90601-90708 gi|966626646|gb|CP013657.1|5438-5544 gi|966626646|gb|CP013657.1|16265-16371 gi|966626646|gb|CP013657.1|84275-84169 gi|966626646|gb|CP013657.1|130706-130600 gi|966626646|gb|CP013657.1|138104-137998 gi|960865004|gb|CP012043.1|3217478-3216930 gi|960865004|gb|CP012043.1|3219223-3219329 gi|937292495|gb|CP012753.1|614386-614934 gi|937292495|gb|CP012753.1|612641-612535 gi|828905932|gb|CP011576.1|33251-32703 gi|828905932|gb|CP011576.1|9306-9199 gi|828905932|gb|CP011576.1|24243-24136 gi|828905932|gb|CP011576.1|4179-4073 gi|828905932|gb|CP011576.1|16957-17063 gi|828905932|gb|CP011576.1|19176-19282 gi|828905932|gb|CP011576.1|29389-29283 gi|828905932|gb|CP011576.1|34996-35102 gi|828905932|gb|CP011576.1|41584-41690 gi|828905932|gb|CP011576.1|47230-47201 gi|825091926|gb|KP789020.1|9424-8876 gi|825091926|gb|KP789020.1|5558-5452 gi|825091926|gb|KP789020.1|11169-11275 gi|825091926|gb|KP789020.1|129611-129505 gi|825091926|gb|KP789020.1|131212-131318 gi|825091926|gb|KP789020.1|138692-138586 gi|815975449|gb|CP011314.1|313421-312873 gi|815975449|gb|CP011314.1|62014-62121 gi|815975449|gb|CP011314.1|57628-57522 gi|815975449|gb|CP011314.1|303873-303979 gi|815975449|gb|CP011314.1|309559-309453 gi|815975449|gb|CP011314.1|315166-315272 gi|815975449|gb|CP011314.1|292421-292358
NCBI	MLS|ermB_7_AF368302|MLS|23S_rRNA_methyltransferases|ERMB	gi|874011340|gb|CP012045.1|1118501-1119211 gi|745811785|gb|CP007593.1|967037-966327 gi|703570643|gb|CP009612.1|1079619-1080329 gi|698841295|emb|LK020698.1|24093-24803 gi|698841065|emb|LK020692.1|27752-27042 gi|698840909|emb|LK020687.1|14138-14848 gi|649571968|emb|HG799503.1|4837-4127 gi|641688100|emb|HG799491.1|44245-44955 gi|556027507|gb|CP006844.1|1748341-1747631 gi|537629960|gb|CP003858.1|645192-644482
Resfinder	MLS|ermB_7_AF368302|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_7_AF368302
ARG-ANNOT	Bla|TEM-125|AY628176|76-936|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-125:AY628176:76-936:861
CARD	Bla|TEM-125|AY628176|76-936|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY628176|75-936|ARO:3000987|TEM-125 [Escherichia coli]
Lahey	Bla|TEM-125|AY628176|76-936|861|betalactams|Class_A_betalactamases|TEM	AAT46414.1 AY628176.1:76-936
NCBI	Bla|TEM-125|AY628176|76-936|861|betalactams|Class_A_betalactamases|TEM	gi|48734423|gb|AY628176.1|76-936
Resfinder	Bla|TEM-125|AY628176|76-936|861|betalactams|Class_A_betalactamases|TEM	blaTEM-125_1_AY628176
ARG-ANNOT	Bla|OXA-25|AF201826|22-849|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-25:AF201826:22-849:828
CARD	Bla|OXA-25|AF201826|22-849|828|betalactams|Class_D_betalactamases|OXA	@phgb|AF201826|21-849|ARO:3001420|OXA-25 [Acinetobacter baumannii]
Lahey	Bla|OXA-25|AF201826|22-849|828|betalactams|Class_D_betalactamases|OXA	AAG35607.1 AF201826.1:22-849
NCBI	Bla|OXA-25|AF201826|22-849|828|betalactams|Class_D_betalactamases|OXA	gi|11493691|gb|AF201826.1|AF201826|22-849 gi|908777896|gb|KT022421.1|33-1
Resfinder	Bla|OXA-25|AF201826|22-849|828|betalactams|Class_D_betalactamases|OXA	blaOXA-25_1_AF201826
ARG-ANNOT	Bla|SHV-43|AY065991|7-867|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-43:AY065991:7-867:861
CARD	Bla|SHV-43|AY065991|7-867|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY065991|6-867|ARO:3001101|SHV-43 [Klebsiella pneumoniae]
Lahey	Bla|SHV-43|AY065991|7-867|861|betalactams|Class_A_betalactamases|SHV	AAL40899.1 AY065991.1:7-867
NCBI	Bla|SHV-43|AY065991|7-867|861|betalactams|Class_A_betalactamases|SHV	gi|695208304|ref|NG_035517.1|7-867
Resfinder	Bla|SHV-43|AY065991|7-867|861|betalactams|Class_A_betalactamases|SHV	blaSHV-43_1_AY065991
ARG-ANNOT	AGly|Aac6-Iv|AF031330|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iv:AF031330:1-441:441
CARD	AGly|Aac6-Iv|AF031330|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF031330|0-441|ARO:3002566|AAC(6')-Iv [Acinetobacter sp. 631]
NCBI	AGly|Aac6-Iv|AF031330|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|2909812|gb|AF031330.1|1-441
Resfinder	AGly|Aac6-Iv|AF031330|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iv_1_AF031330
ARG-ANNOT	Bla|CMY-94|JX514368|272-1417|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-94:JX514368:272-1417:1146
CARD	Bla|CMY-94|JX514368|272-1417|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JX514368|271-1417|ARO:3002107|CMY-94 [Escherichia coli]
Lahey	Bla|CMY-94|JX514368|272-1417|1146|betalactams|Class_C_betalactamases|CMY	AGC54798.1 JX514368.1:272-1417
NCBI	Bla|CMY-94|JX514368|272-1417|1146|betalactams|Class_C_betalactamases|CMY	gi|442540408|gb|JX514368.1|272-1417
Resfinder	Bla|CMY-94|JX514368|272-1417|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-94_1_JX514368
CARD	AGly|CR628337.1|gene1595|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	@phgb|CR628337|1710245-1711238|ARO:3002662|APH(9)-Ia [Legionella pneumophila str. Lens]
NCBI	AGly|CR628337.1|gene1595|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	gi|53752796|emb|CR628337.1|1710246-1711238
CARD	CARD|pvgb|NC_002516.2|3556426-3559198|ARO:3003684|Pseudomonas|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	@pvgb|NC_002516.2|3556426-3559198|ARO:3003684|Pseudomonas aeruginosa gyrA conferring resistance to fluoroquinolones [Pseudomonas aeruginosa PAO1]
NCBI	CARD|pvgb|NC_002516.2|3556426-3559198|ARO:3003684|Pseudomonas|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|1959411-1956640 gi|553895034|gb|CP006832.1|3556422-3559193 gi|553886202|gb|CP006831.1|3556422-3559193 gi|543879514|gb|CP006705.1|3336009-3338780 gi|110227054|gb|AE004091.2|3556427-3559198 gi|459928|gb|L29417.1|PSEGAS|3036-265
CARD	CARD|phgb|AB639410|0-1404|ARO:3003039|oprA|Multi-drug_resistance|Multi-drug_efflux_pumps|OPRA	@phgb|AB639410|0-1404|ARO:3003039|oprA [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AB639410|0-1404|ARO:3003039|oprA|Multi-drug_resistance|Multi-drug_efflux_pumps|OPRA	gi|383502323|dbj|AB639410.1|1-1404
NCBI	gi|388564847|gb|JQ733576.1|betalactams|Class_C_betalactamases|CMY	gi|388564847|gb|JQ733576.1|1028-2255
ARG-ANNOT	gi|314912176|gb|HQ438058.1|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-29:HQ438058:1-741:741
CARD	gi|314912176|gb|HQ438058.1|betalactams|Class_B_betalactamases|IMP	@phgb|JQ041634|1122-1863|ARO:3002220|IMP-29 [Pseudomonas aeruginosa]
Lahey	gi|314912176|gb|HQ438058.1|betalactams|Class_B_betalactamases|IMP	ADT63777.1 HQ438058.1:1-741
NCBI	gi|314912176|gb|HQ438058.1|betalactams|Class_B_betalactamases|IMP	gi|381352240|gb|JQ041634.1|1123-1863 gi|314912176|gb|HQ438058.1|1-741
Resfinder	gi|314912176|gb|HQ438058.1|betalactams|Class_B_betalactamases|IMP	blaIMP-29_1_HQ438058
NCBI	Bla|TEM-52B_1_AF027199|betalactams|Class_A_betalactamases|TEM	gi|765365306|dbj|AB751206.1|1-861 gi|391883318|gb|JQ269336.1|17026-17886 gi|330687083|gb|JF776874.1|17026-17886 gi|2612977|gb|AF027199.1|AF027199|215-1075
Resfinder	Bla|TEM-52B_1_AF027199|betalactams|Class_A_betalactamases|TEM	blaTEM-52B_1_AF027199
CARD	CARD|pvgb|NC_008783|1406995-1409425|ARO:3003302|Bartonella|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|gyrB|RequiresSNPConfirmation	@pvgb|NC_008783|1406995-1409425|ARO:3003302|Bartonella bacilliformis gyrB conferring resistance to aminocoumarin [Bartonella bacilliformis KC583]
NCBI	CARD|pvgb|NC_008783|1406995-1409425|ARO:3003302|Bartonella|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|gyrB|RequiresSNPConfirmation	gi|120613812|gb|CP000524.1|1406996-1409426 gi|515795075|emb|HG315960.1|1-948 gi|515795077|emb|HG315961.1|1-927 gi|698320786|emb|LN624053.1|1-717
NCBI	Bla|SHV-11_8_GQ387358|betalactams|Class_A_betalactamases|SHV	gi|77702549|gb|DQ219475.1|1-861
Resfinder	Bla|SHV-11_8_GQ387358|betalactams|Class_A_betalactamases|SHV	blaSHV-11_8_GQ387358
NCBI	gi|3021576|emb|AJ005044.1|betalactams|Class_A_betalactamases|CTX	gi|695198362|ref|NG_034962.1|1-905
CARD	1846|AF156486.1|AF156486|betalactams|Class_A_betalactamases|GES	@phgb|AF156486|1331-2195|ARO:3002330|GES-1 [Klebsiella pneumoniae]
Lahey	1846|AF156486.1|AF156486|betalactams|Class_A_betalactamases|GES	AAF27723.1 AF156486.1:1332-2195
NCBI	1846|AF156486.1|AF156486|betalactams|Class_A_betalactamases|GES	gi|6752459|gb|AF156486.1|AF156486|1332-2195
ARG-ANNOT	gi|397648609|gb|JX025021.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-241:JX025021:1-825:825
CARD	gi|397648609|gb|JX025021.1|betalactams|Class_D_betalactamases|OXA	@phgb|JX025021|0-825|ARO:3001679|OXA-241 [Acinetobacter baumannii]
Lahey	gi|397648609|gb|JX025021.1|betalactams|Class_D_betalactamases|OXA	AFO55201.1 JX025021.1:1-825
NCBI	gi|397648609|gb|JX025021.1|betalactams|Class_D_betalactamases|OXA	gi|397648609|gb|JX025021.1|1-825
Resfinder	gi|397648609|gb|JX025021.1|betalactams|Class_D_betalactamases|OXA	blaOXA-241_1_JX025021
CARD	CARD|phgb|CP007005|1250264-1251203|ARO:3003186|CARB-23|betalactams|Class_A_betalactamases|CARB	@phgb|CP007005|1250264-1251203|ARO:3003186|CARB-23 [Vibrio parahaemolyticus UCM-V493]
NCBI	CARD|phgb|CP007005|1250264-1251203|ARO:3003186|CARB-23|betalactams|Class_A_betalactamases|CARB	gi|584471901|gb|CP007005.1|1250265-1251204
CARD	222|JQ394987.1|JQ394987|Multi-drug_resistance|Multi-drug_efflux_pumps|MDFA	@phgb|JQ394987|0-1233|ARO:3001328|mdfA [Escherichia coli]
NCBI	222|JQ394987.1|JQ394987|Multi-drug_resistance|Multi-drug_efflux_pumps|MDFA	gi|695226628|ref|NG_041547.1|1-1233
CARD	CARD|phgb|U82085|0-1659|ARO:3000118|vgaB|MLS|Streptogramin_A_efflux_pumps|VGAB	@phgb|U82085|0-1659|ARO:3000118|vgaB [Staphylococcus aureus]
NCBI	CARD|phgb|U82085|0-1659|ARO:3000118|vgaB|MLS|Streptogramin_A_efflux_pumps|VGAB	gi|695208186|ref|NG_035491.1|629-2288
NCBI	Rif|CP001138.1|gene4362|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|807109228|gb|CP011259.1|1317966-1321994 gi|563346448|gb|CP006876.1|4250041-4254069 gi|402535697|gb|JQ728850.1|1-4029 gi|197211055|gb|CP001138.1|4284551-4288579
ARG-ANNOT	Flq|QnrS|FJ418153|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	(Flq)QnrS:FJ418153:1-657:657
CARD	Flq|QnrS|FJ418153|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	@phgb|FJ418153|0-657|ARO:3002793|QnrS4 [Salmonella enterica subsp. enterica serovar Stanley]
NCBI	Flq|QnrS|FJ418153|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|212293302|gb|FJ418153.1|1-657
Resfinder	Flq|QnrS|FJ418153|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	QnrS4_1_FJ418153
NCBI	MLS|ermB_20_AF109075|MLS|23S_rRNA_methyltransferases|ERMB	gi|777202877|emb|LN831030.1|2100371-2099634 gi|777202877|emb|LN831030.1|2102778-2102041 gi|760237048|gb|CP010905.1|2302352-2301615 gi|760237048|gb|CP010905.1|2304759-2304022 gi|733567460|emb|LN614756.1|2277429-2276692 gi|115249003|emb|AM180355.1|2317704-2316967 gi|115249003|emb|AM180355.1|2320111-2319374 gi|669664083|ref|NG_034211.1|4433-5170 gi|669664083|ref|NG_034211.1|6840-7577 gi|15986372|emb|AJ294530.1|399-1136 gi|745811785|gb|CP007593.1|960658-961393
Resfinder	MLS|ermB_20_AF109075|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_20_AF109075
ARG-ANNOT	Bla|CMY-76|JQ733573|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-76:JQ733573:1028-2173:1146
CARD	Bla|CMY-76|JQ733573|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ733573|1027-2173|ARO:3002089|CMY-76 [Citrobacter freundii]
Lahey	Bla|CMY-76|JQ733573|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	AFK73437.1 JQ733573.1:1028-2173
NCBI	Bla|CMY-76|JQ733573|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	gi|388564835|gb|JQ733573.1|1028-2173
Resfinder	Bla|CMY-76|JQ733573|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-76_1_JQ733573
CARD	Bla|FJ666067.1|gene1|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666067|0-1194|ARO:3002501|PDC-4 [Pseudomonas aeruginosa]
Lahey	Bla|FJ666067.1|gene1|betalactams|Class_C_betalactamases|PDC	ACQ82809.1 FJ666067.1:1-1194
NCBI	Bla|FJ666067.1|gene1|betalactams|Class_C_betalactamases|PDC	gi|229597523|gb|FJ666067.1|1-1194
ARG-ANNOT	1628|Y17716.1|Y17716|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-5:Y17716:2374-3519:1146
CARD	1628|Y17716.1|Y17716|betalactams|Class_C_betalactamases|CMY	@phgb|NG_035159|2373-3519|ARO:3002016|CMY-5 [Klebsiella oxytoca]
Lahey	1628|Y17716.1|Y17716|betalactams|Class_C_betalactamases|CMY	CAB50867.1 Y17716.1:2374-3519
NCBI	1628|Y17716.1|Y17716|betalactams|Class_C_betalactamases|CMY	gi|70610192|gb|DQ017661.1|9315-10460 gi|695199084|ref|NG_035159.1|2374-3519
Resfinder	1628|Y17716.1|Y17716|betalactams|Class_C_betalactamases|CMY	blaCMY-5_1_Y17716
ARG-ANNOT	Bla|CEPH-A3|AY112998|197-961|765|betalactams|Class_B_betalactamases|CPHA	(Bla)CEPH-A3:AY112998:197-961:765
CARD	Bla|CEPH-A3|AY112998|197-961|765|betalactams|Class_B_betalactamases|CPHA	@phgb|AY112998|196-961|ARO:3003093|CEPH-A3 [Aeromonas veronii bv. sobria]
NCBI	Bla|CEPH-A3|AY112998|197-961|765|betalactams|Class_B_betalactamases|CPHA	gi|21634397|gb|AY112998.1|197-961
Resfinder	Bla|CEPH-A3|AY112998|197-961|765|betalactams|Class_B_betalactamases|CPHA	blaCEPH-A3_1_AY112998
CARD	Bla|OXA-332_1_KF203106|betalactams|Class_D_betalactamases|OXA	@phgb|KF203106|0-822|ARO:3001520|OXA-332 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-332_1_KF203106|betalactams|Class_D_betalactamases|OXA	AGW16414.1 KF203106.1:1-822
NCBI	Bla|OXA-332_1_KF203106|betalactams|Class_D_betalactamases|OXA	gi|544207411|gb|KF203106.1|1-822
Resfinder	Bla|OXA-332_1_KF203106|betalactams|Class_D_betalactamases|OXA	blaOXA-332_1_KF203106
ARG-ANNOT	Bla|OXA-228|JQ422053|100-930|831|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-228:JQ422053:100-930:831
CARD	Bla|OXA-228|JQ422053|100-930|831|betalactams|Class_D_betalactamases|OXA	@phgb|JQ422053|99-930|ARO:3001691|OXA-228 [Acinetobacter bereziniae]
Lahey	Bla|OXA-228|JQ422053|100-930|831|betalactams|Class_D_betalactamases|OXA	AFM55001.1 JQ422053.1:100-930
NCBI	Bla|OXA-228|JQ422053|100-930|831|betalactams|Class_D_betalactamases|OXA	gi|392295711|gb|JQ422053.1|100-930
Resfinder	Bla|OXA-228|JQ422053|100-930|831|betalactams|Class_D_betalactamases|OXA	blaOXA-228_1_JQ422053
CARD	CARD|phgb|AY210887|111-972|ARO:3001104|SHV-46|betalactams|Class_A_betalactamases|SHV	@phgb|AY210887|111-972|ARO:3001104|SHV-46 [Klebsiella oxytoca]
NCBI	CARD|phgb|AY210887|111-972|ARO:3001104|SHV-46|betalactams|Class_A_betalactamases|SHV	gi|28912444|gb|AY210887.1|112-973
ARG-ANNOT	Bla|OKP-B-13|AY825330|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-13:AY825330:1-861:861
CARD	Bla|OKP-B-13|AY825330|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AY825330|0-861|ARO:3002446|OKP-B-13 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-13|AY825330|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|56159737|gb|AY825330.1|1-861
Resfinder	Bla|OKP-B-13|AY825330|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-13_1_AY825330
CARD	Bla|cfxA3_1_AF472622|betalactams|Class_A_betalactamases|CFX	@phgb|AF472622|52-1018|ARO:3003003|CfxA3 [Capnocytophaga ochracea]
NCBI	Bla|cfxA3_1_AF472622|betalactams|Class_A_betalactamases|CFX	gi|22450700|gb|AF472622.2|53-1018
Resfinder	Bla|cfxA3_1_AF472622|betalactams|Class_A_betalactamases|CFX	cfxA3_1_AF472622
CARD	gi|693586039|gb|KM114268.1|betalactams|Class_A_betalactamases|TEM	@phgb|KM114268|0-861|ARO:3003157|TEM-219 [Escherichia coli]
Lahey	gi|693586039|gb|KM114268.1|betalactams|Class_A_betalactamases|TEM	AIS39742.1 KM114268.1:1-861
NCBI	gi|693586039|gb|KM114268.1|betalactams|Class_A_betalactamases|TEM	gi|693586039|gb|KM114268.1|1-861
ARG-ANNOT	gi|344179208|gb|JF460796.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-62:JF460796:1-1146:1146
CARD	gi|344179208|gb|JF460796.1|betalactams|Class_C_betalactamases|CMY	@phgb|JF460796|0-1146|ARO:3002075|CMY-62 [Escherichia coli]
Lahey	gi|344179208|gb|JF460796.1|betalactams|Class_C_betalactamases|CMY	AEM97674.1 JF460796.1:1-1146
NCBI	gi|344179208|gb|JF460796.1|betalactams|Class_C_betalactamases|CMY	gi|344179208|gb|JF460796.1|1-1146
Resfinder	gi|344179208|gb|JF460796.1|betalactams|Class_C_betalactamases|CMY	blaCMY-62_1_JF460796
ARG-ANNOT	1282|JN982330.1|JN982330|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-31:JN982330:246-1046:801
CARD	1282|JN982330.1|JN982330|betalactams|Class_B_betalactamases|VIM	@phgb|JN982330|245-1046|ARO:3002301|VIM-31 [Enterobacter cloacae]
Lahey	1282|JN982330.1|JN982330|betalactams|Class_B_betalactamases|VIM	AFK24647.1 JN982330.1:246-1046
NCBI	1282|JN982330.1|JN982330|betalactams|Class_B_betalactamases|VIM	gi|396924944|gb|JN566054.1|1-801 gi|388253361|gb|JN982330.1|246-1046
Resfinder	1282|JN982330.1|JN982330|betalactams|Class_B_betalactamases|VIM	blaVIM-31_1_JN982330
ARG-ANNOT	AGly|AacA4|AF416297|2738-3304|567|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)AacA4:AF416297:2738-3304:567
NCBI	AGly|AacA4|AF416297|2738-3304|567|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|15866615|gb|AF416297.1|2738-3304 gi|974751547|gb|KU130294.1|207932-207368 gi|762041897|gb|KM589497.1|3848-4412 gi|723217933|gb|KM382183.1|723-1287 gi|697287983|dbj|AB715422.2|26585-27149 gi|672858205|gb|KF998105.1|4285-4849 gi|648296171|dbj|AB917040.2|91-655 gi|636632020|gb|KJ623741.1|723-1287 gi|636631997|gb|KJ575542.1|671-1235 gi|636631830|gb|KJ543560.1|670-1234
CARD	CARD|phgb|KC895984|1081-1855|ARO:3002631|spd|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|SPD	@phgb|KC895984|1081-1855|ARO:3002631|spd [Staphylococcus aureus]
NCBI	CARD|phgb|KC895984|1081-1855|ARO:3002631|spd|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|SPD	gi|575882248|emb|HG803547.1|1057-1831 gi|545911185|gb|KC895984.1|1082-1856
CARD	CARD|pvgb|U75641|19-1066|ARO:3000464|Neisseria|Multi-drug_resistance|MDR_mutant_porin_proteins|POR|RequiresSNPConfirmation	@pvgb|U75641|19-1066|ARO:3000464|Neisseria gonorrhoeae mutant porin PIB (por) with reduced permeability to antibiotic [Neisseria gonorrhoeae]
NCBI	CARD|pvgb|U75641|19-1066|ARO:3000464|Neisseria|Multi-drug_resistance|MDR_mutant_porin_proteins|POR|RequiresSNPConfirmation	gi|1763333|gb|U75641.1|NGU75641|20-1067
CARD	gi|157779406|gb|EU019536.1|betalactams|Class_D_betalactamases|OXA	@phgb|EU019536|0-825|ARO:3001635|OXA-82 [Acinetobacter baumannii]
Lahey	gi|157779406|gb|EU019536.1|betalactams|Class_D_betalactamases|OXA	ABV71248.1 EU019536.1:1-825
NCBI	gi|157779406|gb|EU019536.1|betalactams|Class_D_betalactamases|OXA	gi|157779406|gb|EU019536.1|1-825
Resfinder	gi|157779406|gb|EU019536.1|betalactams|Class_D_betalactamases|OXA	blaOXA-82_2_EU019536
NCBI	gi|374414421|gb|JN714480.1|betalactams|Class_C_betalactamases|CMY	gi|374414421|gb|JN714480.1|1040-2267
ARG-ANNOT	Tmt|DfrG|AB205645|1013-1510|498|Trimethoprim|Dihydrofolate_reductase|DFRG	(Tmt)DfrG:AB2056451013-1510:498
CARD	Tmt|DfrG|AB205645|1013-1510|498|Trimethoprim|Dihydrofolate_reductase|DFRG	@phgb|AB205645|1012-1510|ARO:3002868|dfrG [Staphylococcus aureus]
NCBI	Tmt|DfrG|AB205645|1013-1510|498|Trimethoprim|Dihydrofolate_reductase|DFRG	gi|925190036|gb|CP012593.1|1902092-1902589 gi|807232188|gb|CP011116.1|1363522-1364019 gi|765526196|gb|KP001176.1|5198-5695 gi|760491253|gb|CP010943.1|2291115-2291612 gi|748807120|gb|CP010526.1|901129-901626 gi|748807120|gb|CP010526.1|2474600-2475097 gi|657154530|gb|CP007447.1|470749-470252 gi|554590848|gb|CP006838.1|453891-453394 gi|442768434|gb|JX120102.1|3342-2845 gi|402229133|gb|JX498941.1|900-1397 gi|378937014|gb|CP003351.1|69219-68722
Resfinder	Tmt|DfrG|AB205645|1013-1510|498|Trimethoprim|Dihydrofolate_reductase|DFRG	dfrG_1_AB205645
CARD	CARD|phgb|AL123456|3626662-3627349|ARO:3000816|mtrA|Multi-drug_resistance|MDR_regulator|MTRA	@phgb|AL123456|3626662-3627349|ARO:3000816|mtrA [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|phgb|AL123456|3626662-3627349|ARO:3000816|mtrA|Multi-drug_resistance|MDR_regulator|MTRA	gi|984994143|gb|CP010340.1|3643545-3644232 gi|984989958|gb|CP010339.1|3625877-3626564 gi|984985728|gb|CP010338.1|3617246-3617933 gi|984981517|gb|CP010337.1|3634270-3634957 gi|984976917|gb|CP010336.1|3612077-3612764 gi|984972452|gb|CP010335.1|3621743-3622430 gi|984967653|gb|CP010334.1|3603130-3603817 gi|984963331|gb|CP010333.1|3617463-3618150 gi|984959134|gb|CP010332.1|3577437-3578124 gi|984950177|gb|CP010330.1|3634474-3635161
CARD	Bla|OXA-371_1_AB871653|betalactams|Class_D_betalactamases|OXA	@phgb|AB871653|11870-12695|ARO:3001557|OXA-371 [Acinetobacter baumannii]
Lahey	Bla|OXA-371_1_AB871653|betalactams|Class_D_betalactamases|OXA	BAO09635.1 AB871653.1:11871-12695
NCBI	Bla|OXA-371_1_AB871653|betalactams|Class_D_betalactamases|OXA	gi|558754885|dbj|AB871653.1|11871-12695
Resfinder	Bla|OXA-371_1_AB871653|betalactams|Class_D_betalactamases|OXA	blaOXA-371_1_AB871653
ARG-ANNOT	Bla|OXY5-2|AJ871871|1-873|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY5-2:AJ871871:1-873:873
CARD	Bla|OXY5-2|AJ871871|1-873|873|betalactams|Class_A_betalactamases|OXY	@phgb|AJ871871|0-873|ARO:3002412|OXY-5-2 [Klebsiella oxytoca]
NCBI	Bla|OXY5-2|AJ871871|1-873|873|betalactams|Class_A_betalactamases|OXY	gi|60416708|emb|AJ871871.1|1-873
Resfinder	Bla|OXY5-2|AJ871871|1-873|873|betalactams|Class_A_betalactamases|OXY	blaOXY-5-2_2_AJ871871
CARD	CARD|phgb|NC_002516.2|5584100-5585549|ARO:3003682|OpmH|Multi-drug_resistance|Multi-drug_efflux_pumps|OPMH	@phgb|NC_002516.2|5584100-5585549|ARO:3003682|OpmH [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516.2|5584100-5585549|ARO:3003682|OpmH|Multi-drug_resistance|Multi-drug_efflux_pumps|OPMH	gi|926451317|emb|LN871187.1|5596163-5597611 gi|553895034|gb|CP006832.1|5584096-5585544 gi|553886202|gb|CP006831.1|5585181-5586629 gi|543879514|gb|CP006705.1|5363682-5365130 gi|110227054|gb|AE004091.2|5584101-5585549 gi|25137490|dbj|AB085584.1|1-1449
ARG-ANNOT	Bla|OXA-278|KC771279|1-831|831|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-278:KC771279:1-831:831
CARD	Bla|OXA-278|KC771279|1-831|831|betalactams|Class_D_betalactamases|OXA	@phgb|KC771279|0-831|ARO:3001681|OXA-278 [Acinetobacter schindleri]
Lahey	Bla|OXA-278|KC771279|1-831|831|betalactams|Class_D_betalactamases|OXA	AGI65307.1 KC771279.1:1-831
NCBI	Bla|OXA-278|KC771279|1-831|831|betalactams|Class_D_betalactamases|OXA	gi|476464185|gb|KC771279.1|1-831
Resfinder	Bla|OXA-278|KC771279|1-831|831|betalactams|Class_D_betalactamases|OXA	blaOXA-278_1_KC771279
ARG-ANNOT	Bla|TEM-16|X65254|176-1036|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-16:X65254:176-1036:861
CARD	Bla|TEM-16|X65254|176-1036|861|betalactams|Class_A_betalactamases|TEM	@phgb|X65254|175-1036|ARO:3000887|TEM-16 [Klebsiella pneumoniae]
Lahey	Bla|TEM-16|X65254|176-1036|861|betalactams|Class_A_betalactamases|TEM	CAA46346.1 X65254.1:176-1036
NCBI	Bla|TEM-16|X65254|176-1036|861|betalactams|Class_A_betalactamases|TEM	gi|296955|emb|X65254.1|176-1036
Resfinder	Bla|TEM-16|X65254|176-1036|861|betalactams|Class_A_betalactamases|TEM	blaTEM-16_1_X65254
ARG-ANNOT	gi|298113023|gb|HM113560.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-174:HM113560:1-825:825
CARD	gi|298113023|gb|HM113560.1|betalactams|Class_D_betalactamases|OXA	@phgb|HM113560|0-825|ARO:3001658|OXA-174 [Acinetobacter baumannii]
Lahey	gi|298113023|gb|HM113560.1|betalactams|Class_D_betalactamases|OXA	ADI58618.1 HM113560.1:1-825
NCBI	gi|298113023|gb|HM113560.1|betalactams|Class_D_betalactamases|OXA	gi|298113023|gb|HM113560.1|1-825
Resfinder	gi|298113023|gb|HM113560.1|betalactams|Class_D_betalactamases|OXA	blaOXA-174_1_HM113560
NCBI	Bla|EF468463.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|134154076|gb|EF468463.1|9-927
NCBI	gi|817490718|gb|KP264123.1|betalactams|Class_D_betalactamases|OXA	gi|817490718|gb|KP264123.1|1-896
ARG-ANNOT	Bla|SHV-15|AJ011428|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-15:AJ011428:1-861:861
CARD	Bla|SHV-15|AJ011428|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AJ011428|0-861|ARO:3001074|SHV-15 [Escherichia coli]
Lahey	Bla|SHV-15|AJ011428|1-861|861|betalactams|Class_A_betalactamases|SHV	CAB37325.2 AJ011428.2:1-861
NCBI	Bla|SHV-15|AJ011428|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|15131525|emb|AJ011428.2|1-861
Resfinder	Bla|SHV-15|AJ011428|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-15_1_AJ011428
NCBI	Sul|sul1_11_DQ914960|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|937559777|gb|KT454971.1|367058-366177 gi|937559777|gb|KT454971.1|358200-357382 gi|164521141|gb|DQ914960.2|5778-6659 gi|164521141|gb|DQ914960.2|14636-15454 gi|984881271|gb|CP014215.1|2292203-2291385 gi|984881271|gb|CP014215.1|2304967-2304149 gi|970698242|gb|KT988020.1|22635-23453 gi|970698221|gb|KT988019.1|7447-8265 gi|970698093|gb|KT988018.1|115121-115939 gi|982189197|gb|CP013993.1|5424788-5425606 gi|982189197|gb|CP013993.1|5430539-5431065 gi|974752094|gb|KT164809.1|5954-5136 gi|974751547|gb|KU130294.1|238652-237834 gi|974751547|gb|KU130294.1|233473-234001 gi|974751143|gb|KU238092.1|13028-12210
Resfinder	Sul|sul1_11_DQ914960|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_11_DQ914960
NCBI	Tmt|dfrA14_1_DQ388123|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|88604678|gb|DQ388123.1|107-589
Resfinder	Tmt|dfrA14_1_DQ388123|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA14_1_DQ388123
ARG-ANNOT	Bla|OCH-8|DQ489307|1071-2243|1173|betalactams|Class_C_betalactamases|OCH	(Bla)OCH-8:DQ489307:1071-2243:1173
CARD	Bla|OCH-8|DQ489307|1071-2243|1173|betalactams|Class_C_betalactamases|OCH	@phgb|DQ489307|1070-2243|ARO:3002521|OCH-8 [Ochrobactrum anthropi]
NCBI	Bla|OCH-8|DQ489307|1071-2243|1173|betalactams|Class_C_betalactamases|OCH	gi|95026179|gb|DQ489307.1|1071-2243
Resfinder	Bla|OCH-8|DQ489307|1071-2243|1173|betalactams|Class_C_betalactamases|OCH	blaOCH-8_1_DQ489307
ARG-ANNOT	Tmt|DfrA14|GU726917|72-545|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA14:GU726917:72-545:474
NCBI	Tmt|DfrA14|GU726917|72-545|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|971339514|gb|CP006662.2|8281-8754 gi|966624404|gb|CP011999.1|43351-42878 gi|959153704|gb|CP012993.1|36983-36510 gi|959147947|gb|CP012988.1|56236-56709 gi|958108299|emb|LN824135.1|80512-80985 gi|909863445|gb|CP012169.1|47320-47793 gi|828921939|gb|CP011589.1|4808-5281 gi|822476033|dbj|LC055503.1|100458-100931 gi|696158530|gb|KJ721789.1|127886-127413 gi|806639060|gb|KM023153.1|80313-79840
CARD	Bla|KF885217.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF885217|0-825|ARO:3001552|OXA-365 [Acinetobacter baumannii]
Lahey	Bla|KF885217.1|gene1|betalactams|Class_D_betalactamases|OXA	AHI63011.1 KF885217.1:1-825
NCBI	Bla|KF885217.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|584090094|gb|KF885217.1|1-825
CARD	gi|698174161|gb|KM087835.1|betalactams|Class_C_betalactamases|ACT	@phgb|KM087835|0-1146|ARO:3001852|ACT-32 [Enterobacter cloacae]
Lahey	gi|698174161|gb|KM087835.1|betalactams|Class_C_betalactamases|ACT	AIT76088.1 KM087835.1:1-1146
NCBI	gi|698174161|gb|KM087835.1|betalactams|Class_C_betalactamases|ACT	gi|698174161|gb|KM087835.1|1-1146
ARG-ANNOT	Bla|SHV-109|EU418913|17-877|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-109:EU418913:17-877:861
CARD	Bla|SHV-109|EU418913|17-877|861|betalactams|Class_A_betalactamases|SHV	@phgb|EU418913|16-877|ARO:3001158|SHV-109 [Klebsiella pneumoniae]
Lahey	Bla|SHV-109|EU418913|17-877|861|betalactams|Class_A_betalactamases|SHV	ACM04459.1 EU418913.1:17-877
NCBI	Bla|SHV-109|EU418913|17-877|861|betalactams|Class_A_betalactamases|SHV	gi|221149271|gb|EU418913.1|17-877
Resfinder	Bla|SHV-109|EU418913|17-877|861|betalactams|Class_A_betalactamases|SHV	blaSHV-109_1_EU418913
ARG-ANNOT	AGly|Aac3-IIc|X54723|819-1679|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-IIc:X54723:819-1679:861
CARD	AGly|Aac3-IIc|X54723|819-1679|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|X54723|818-1679|ARO:3002535|AAC(3)-IIc [Escherichia coli]
NCBI	AGly|Aac3-IIc|X54723|819-1679|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|45769|emb|X54723.1|819-1679
Resfinder	AGly|Aac3-IIc|X54723|819-1679|861|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	aac(3)-IIc_1_X54723
CARD	CARD|phgb|HM440348|775-1861|ARO:3000549|adeS|Multi-drug_resistance|MDR_regulator|ADES	@phgb|HM440348|775-1861|ARO:3000549|adeS [Acinetobacter baumannii]
NCBI	CARD|phgb|HM440348|775-1861|ARO:3000549|adeS|Multi-drug_resistance|MDR_regulator|ADES	gi|306485916|gb|HM440348.1|776-1861 gi|306485913|gb|HM440347.1|776-1861
CARD	CARD|phgb|L06161|105-945|ARO:3002538|AAC3-IIIc|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|L06161|105-945|ARO:3002538|AAC(3)-IIIc [Pseudomonas aeruginosa]
NCBI	CARD|phgb|L06161|105-945|ARO:3002538|AAC3-IIIc|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|150955|gb|L06161.1|PSEAAC3C|106-946 gi|769535856|gb|CP010800.1|790536-790574 gi|764013881|dbj|LC030179.1|1-39
ARG-ANNOT	Gly|VanTc3|AY033764|1644-3746|2103|Glycopeptides|VanC-type_resistance_protein|VANTC	(Gly)VanTc3:AY033764:1644-3746:2103
NCBI	Gly|VanTc3|AY033764|1644-3746|2103|Glycopeptides|VanC-type_resistance_protein|VANTC	gi|18476137|gb|AY033764.1|1644-3746
NCBI	gi|160948438|emb|AM176549.2|betalactams|Class_A_betalactamases|SHV	gi|160948438|emb|AM176549.2|1-891
CARD	Phe|D37826.1|gene1|Phenicol|Phenicol_efflux_pumps|FLOR	@phgb|D37826|1070-2195|ARO:3002812|pp-flo [Photobacterium damselae subsp. piscicida]
NCBI	Phe|D37826.1|gene1|Phenicol|Phenicol_efflux_pumps|FLOR	gi|695197141|ref|NG_034640.1|1071-2195
ARG-ANNOT	Flq|QnrB22|FJ981621|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB22:FJ981621:37-681:645
CARD	Flq|QnrB22|FJ981621|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|FJ981621|0-648|ARO:3002737|QnrB22 [Citrobacter werkmanii]
NCBI	Flq|QnrB22|FJ981621|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695214224|ref|NG_036775.1|1-648
Resfinder	Flq|QnrB22|FJ981621|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB22_1_FJ981621
NCBI	Bla|blaZ_40_DQ269019|betalactams|Class_A_betalactamases|BLAZ	gi|695200788|ref|NG_036179.1|6-851
NCBI	Elf|CP002332.1|gene1202|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|317013424|gb|CP002332.1|1272961-1271762
NCBI	Rif|NC_012491.1.7717716|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|226092535|dbj|AP008955.1|221485-225024
ARG-ANNOT	Bla|B-11|AY348326|1-750|750|betalactams|Class_B_betalactamases|BLAB	(Bla)B-11:AY348326:1-750:750
NCBI	Bla|B-11|AY348326|1-750|750|betalactams|Class_B_betalactamases|BLAB	gi|33772771|gb|AY348326.1|1-750
Resfinder	Bla|B-11|AY348326|1-750|750|betalactams|Class_B_betalactamases|BLAB	blaB-11_1_AY348326
NCBI	Tet|tetW_5_AJ427421|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	gi|94016154|emb|AJ427421.2|1477-3396
Resfinder	Tet|tetW_5_AJ427421|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	tet(W)_5_AJ427421
NCBI	Flq|AL009126.3|gene7|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|983204966|gb|CP014166.1|6993-9458 gi|846133629|gb|CP011882.1|959577-962042 gi|807072327|gb|CP011115.1|6993-9458 gi|749183975|gb|CP010314.1|6994-9459 gi|728887195|gb|CP010053.1|6993-9458 gi|728882887|gb|CP010052.1|6994-9459 gi|724425628|emb|LN680001.1|6994-9459 gi|723796434|emb|LN649259.1|6994-9459 gi|670919138|gb|CP005997.1|6994-9459 gi|649013680|gb|CP008698.1|6994-9459
CARD	Flq|QnrVC3_1_HM015626|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	@phgb|HM015626|883-1540|ARO:3002800|QnrVC3 [Vibrio cholerae non-O1/non-O139]
NCBI	Flq|QnrVC3_1_HM015626|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	gi|298399403|gb|HM015626.1|884-1540
Resfinder	Flq|QnrVC3_1_HM015626|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	QnrVC3_1_HM015626
NCBI	Rif|HM015626.1|gene1|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|298399403|gb|HM015626.1|107-559
ARG-ANNOT	Bla|TEM-182|HQ317449|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-182:HQ317449:1-861:861
CARD	Bla|TEM-182|HQ317449|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|HQ317449|0-861|ARO:3001373|TEM-182 [Haemophilus parainfluenzae]
Lahey	Bla|TEM-182|HQ317449|1-861|861|betalactams|Class_A_betalactamases|TEM	ADP20705.1 HQ317449.1:1-861
NCBI	Bla|TEM-182|HQ317449|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|444746823|gb|KC292504.1|4262-5122 gi|310757478|gb|HQ317449.1|1-861
Resfinder	Bla|TEM-182|HQ317449|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-182_1_HQ317449
NCBI	948|DQ464881.1|DQ464881|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|984686374|gb|HQ700358.2|19996-19505 gi|974751547|gb|KU130294.1|219297-218806 gi|974751143|gb|KU238092.1|9800-9309 gi|981191958|emb|LN999997.1|2509737-2510228 gi|975007785|gb|CP010832.1|3316-2825 gi|954666075|gb|KT962845.1|18399-17908 gi|971497891|gb|CP012901.1|3692102-3692593 gi|971493847|gb|CP010351.1|33767-34258 gi|971339514|gb|CP006662.2|53733-53242 gi|943457735|gb|KT818627.1|109435-108944
NCBI	AGly|AB104852.1|gene4|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|677283264|dbj|AB983593.1|3989-4780 gi|674252391|gb|CP008739.2|2104891-2105682 gi|575771381|dbj|AB901038.1|2713-3504 gi|575771377|dbj|AB901037.1|1584-2375 gi|549442311|gb|KF512018.1|1991-2782 gi|348031532|dbj|AP012280.1|1896671-1897462 gi|46092527|dbj|AB104852.1|2561-3352
CARD	CARD|phgb|U35369|177-840|ARO:3002921|vanRB|Glycopeptides|VanB-type_regulator|VANRB	@phgb|U35369|177-840|ARO:3002921|vanRB [Enterococcus faecalis]
NCBI	CARD|phgb|U35369|177-840|ARO:3002921|vanRB|Glycopeptides|VanB-type_regulator|VANRB	gi|29350190|gb|AE016830.1|2218788-2218126 gi|1209525|gb|U35369.1|EFU35369|178-840
NCBI	Sul|sul2_10_AM183225|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|88853289|emb|AM183225.1|10491-11309
Resfinder	Sul|sul2_10_AM183225|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_10_AM183225
CARD	CARD|phgb|NC_003197|392418-393876|ARO:3000791|mdsC|Multi-drug_resistance|Multi-drug_efflux_pumps|MDSC	@phgb|NC_003197|392418-393876|ARO:3000791|mdsC [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	CARD|phgb|NC_003197|392418-393876|ARO:3000791|mdsC|Multi-drug_resistance|Multi-drug_efflux_pumps|MDSC	gi|981191958|emb|LN999997.1|4980850-4979392 gi|973795115|gb|AE006468.2|392420-393878 gi|808186398|gb|CP007523.1|1166754-1168212 gi|777177758|emb|LN829401.1|2522732-2521274 gi|764057510|gb|CP007235.1|1165374-1166832 gi|674281104|gb|CP009102.1|360812-362270 gi|669110799|gb|CP007804.2|393112-394570 gi|661245796|dbj|AP014565.1|433090-434548 gi|618631222|gb|CP007581.1|430527-431985 gi|548933035|emb|HG326213.1|392402-393860
NCBI	Flq|NC_007793.3913356|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|899750970|gb|CP012120.1|2433921-2431519 gi|743649775|gb|CP010300.1|1374164-1376566 gi|743624649|gb|CP010299.1|1374164-1376566 gi|743618732|gb|CP010298.1|1374163-1376565 gi|743615870|gb|CP010297.1|1374164-1376566 gi|743612995|gb|CP010296.1|1374164-1376566 gi|743602172|gb|CP010295.1|1374164-1376566 gi|584463070|gb|CP007176.1|1393883-1396285 gi|87125858|gb|CP000255.1|1374167-1376569
ARG-ANNOT	Bla|SHV-2_2_AF282921|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-2:AF148851:6-866:861
CARD	Bla|SHV-2_2_AF282921|betalactams|Class_A_betalactamases|SHV	@phgb|AF148851|5-866|ARO:3001060|SHV-2 [Escherichia coli]
Lahey	Bla|SHV-2_2_AF282921|betalactams|Class_A_betalactamases|SHV	AAD37413.1 AF148851.1:6-866
NCBI	Bla|SHV-2_2_AF282921|betalactams|Class_A_betalactamases|SHV	gi|675218243|emb|FO818745.1|22121-21261 gi|295917911|gb|GU732836.1|13-873 gi|110264421|gb|DQ449578.1|81847-80987 gi|695210228|ref|NG_035915.1|1-861 gi|695200097|ref|NG_035376.1|1441-2301 gi|5002313|gb|AF148851.1|AF148851|6-866 gi|43789|emb|X53433.1|931-1791 gi|150488|gb|M95179.1|P60BETALAC|187-1047
Resfinder	Bla|SHV-2_2_AF282921|betalactams|Class_A_betalactamases|SHV	blaSHV-2_2_AF282921
ARG-ANNOT	Bla|TEM-84|AF417130|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-84:AF427130:209-1069:861
CARD	Bla|TEM-84|AF417130|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF427130|208-1069|ARO:3000951|TEM-84 [Escherichia coli]
Lahey	Bla|TEM-84|AF417130|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAL29436.1 AF427130.1:209-1069
NCBI	Bla|TEM-84|AF417130|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|16798375|gb|AF427130.1|AF427130|209-1069
Resfinder	Bla|TEM-84|AF417130|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-84_1_AF427130
NCBI	Fos|fosA_8_ACHE01000077|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|672710284|emb|HG813242.1|164512-164940 gi|27316888|gb|AE015929.1|221537-221965
Resfinder	Fos|fosA_8_ACHE01000077|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_8_ACHE01000077
CARD	Bla|GQ434004.1|gene2|betalactams|Class_A_betalactamases|CARB	@phgb|GQ434004|751-1618|ARO:3002241|CARB-2 [Salmonella enterica subsp. enterica serovar Havana]
NCBI	Bla|GQ434004.1|gene2|betalactams|Class_A_betalactamases|CARB	gi|297382634|gb|GQ434004.1|752-1618
CARD	Bla|OXA-60_4_AY662675|betalactams|Class_D_betalactamases|OXA	@phgb|AF525303|2770-3586|ARO:3001808|OXA-60 [Ralstonia pickettii]
Lahey	Bla|OXA-60_4_AY662675|betalactams|Class_D_betalactamases|OXA	AAQ08905.1 AF525303.2:2771-3586
NCBI	Bla|OXA-60_4_AY662675|betalactams|Class_D_betalactamases|OXA	gi|50236428|gb|AY662675.1|1-816 gi|68137399|gb|AF525303.2|2771-3586
Resfinder	Bla|OXA-60_4_AY662675|betalactams|Class_D_betalactamases|OXA	blaOXA-60_4_AY662675
NCBI	Elf|CP001918.1|gene4764|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|295054830|gb|CP001918.1|4817537-4816614
ARG-ANNOT	Bla|OKP-A-15|FJ755841|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-15:FJ755841:1-861:861
CARD	Bla|OKP-A-15|FJ755841|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|FJ755841|0-846|ARO:3002432|OKP-A-15 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-15|FJ755841|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|224814397|gb|FJ755841.1|1-846
Resfinder	Bla|OKP-A-15|FJ755841|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-15_1_FJ755841
ARG-ANNOT	Bla|VIM-36|JX982635|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-36:JX982635:1-801:801
CARD	Bla|VIM-36|JX982635|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|JX982635|0-801|ARO:3002306|VIM-36 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-36|JX982635|1-801|801|betalactams|Class_B_betalactamases|VIM	AGC50806.1 JX982635.1:1-801
NCBI	Bla|VIM-36|JX982635|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|441494187|gb|JX982635.1|1-801
Resfinder	Bla|VIM-36|JX982635|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-36_1_JX982635
NCBI	Flq|NC_003197.1.1254697|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|973795115|gb|AE006468.2|3339212-3336954 gi|808186398|gb|CP007523.1|4023443-4021185 gi|777181114|emb|LN829402.1|678255-680513 gi|764057510|gb|CP007235.1|4110891-4108633 gi|674281104|gb|CP009102.1|3275107-3272849 gi|669110799|gb|CP007804.2|3250748-3248490 gi|661245796|dbj|AP014565.1|3471173-3468915 gi|618631222|gb|CP007581.1|3372468-3370210 gi|545006446|emb|HF937208.1|3372464-3370206 gi|523821078|gb|CP006602.1|4592941-4590683
ARG-ANNOT	Bla|OXA-111|EF650037|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-111:EF650037:1-825:825
CARD	Bla|OXA-111|EF650037|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|EF650037|0-825|ARO:3001642|OXA-111 [Acinetobacter baumannii]
Lahey	Bla|OXA-111|EF650037|1-825|825|betalactams|Class_D_betalactamases|OXA	ABV31691.1 EF650037.1:1-825
NCBI	Bla|OXA-111|EF650037|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|157285908|gb|EF650037.1|1-825
Resfinder	Bla|OXA-111|EF650037|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-111_1_EF650037
NCBI	MLS|vatE_8_AY043209|MLS|Streptogramin_A_O-acetyltransferase|VATE	gi|15266470|gb|AY043209.1|1-645
Resfinder	MLS|vatE_8_AY043209|MLS|Streptogramin_A_O-acetyltransferase|VATE	vat(E)_8_AY043209
ARG-ANNOT	Gly|VanE|FJ872411|39736-40794|1059|Glycopeptides|VanE-type_resistance_protein|VANE	(Gly)VanE:FJ872411:39736-40794:1059
CARD	Gly|VanE|FJ872411|39736-40794|1059|Glycopeptides|VanE-type_resistance_protein|VANE	@phgb|FJ872411|39735-40794|ARO:3002907|vanE [Enterococcus faecalis]
NCBI	Gly|VanE|FJ872411|39736-40794|1059|Glycopeptides|VanE-type_resistance_protein|VANE	gi|229892433|gb|FJ872411.1|39736-40794
CARD	CARD|phgb|AM087453|25-856|ARO:3001138|SHV-84|betalactams|Class_A_betalactamases|SHV	@phgb|AM087453|25-856|ARO:3001138|SHV-84 [Escherichia coli]
NCBI	CARD|phgb|AM087453|25-856|ARO:3001138|SHV-84|betalactams|Class_A_betalactamases|SHV	gi|157676815|emb|AM087453.1|26-857
NCBI	Elf|CP000675.2|gene397|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|225791049|gb|CP000675.2|435626-436816
ARG-ANNOT	Bla|OXA-134|FJ195387|695-1516|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-134:FJ195387:695-1516:822
NCBI	Bla|OXA-134|FJ195387|695-1516|822|betalactams|Class_D_betalactamases|OXA	gi|208343784|gb|FJ195387.1|695-1516
NCBI	Bla|NC_010066.5774791|betalactams|Class_A_betalactamases|BLAZ	gi|941145663|gb|CP007673.1|17238-16393 gi|828464226|gb|CP007675.1|10754-11599 gi|828444740|gb|CP007671.1|17638-16793 gi|160369760|gb|CP000732.1|10528-9683
CARD	CARD|phgb|AJ878850|1196-1829|ARO:3003110|catB10|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|AJ878850|1196-1829|ARO:3003110|catB10 [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AJ878850|1196-1829|ARO:3003110|catB10|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|124377167|emb|AJ878850.1|1197-1830
CARD	Bla|CTX-M-82_1_DQ256091|betalactams|Class_A_betalactamases|CTX	@phgb|DQ256091|98-974|ARO:3001943|CTX-M-82 [Escherichia coli]
Lahey	Bla|CTX-M-82_1_DQ256091|betalactams|Class_A_betalactamases|CTX	ABB59946.1 DQ256091.1:99-974
NCBI	Bla|CTX-M-82_1_DQ256091|betalactams|Class_A_betalactamases|CTX	gi|291061254|gb|GU477621.1|243-1118 gi|81238144|gb|DQ256091.1|99-974
Resfinder	Bla|CTX-M-82_1_DQ256091|betalactams|Class_A_betalactamases|CTX	blaCTX-M-82_1_DQ256091
CARD	CARD|phgb|NC_012491|4758175-4759207|ARO:3002815|clbB|Phenicol|Phenicol_23S_rRNA_methyltransferases|CLBB	@phgb|NC_012491|4758175-4759207|ARO:3002815|clbB [Brevibacillus brevis NBRC 100599]
NCBI	CARD|phgb|NC_012491|4758175-4759207|ARO:3002815|clbB|Phenicol|Phenicol_23S_rRNA_methyltransferases|CLBB	gi|226092535|dbj|AP008955.1|4758176-4759208
NCBI	Gly|GQ149347.1|gene3|Glycopeptides|Bleomycin_resistance_protein|BRP	gi|985566439|dbj|LC068960.1|7964-7566 gi|985566378|dbj|LC068959.1|19465-19067 gi|974697948|dbj|AP017320.1|40592-40194 gi|937637449|gb|KT601170.1|49724-49326 gi|908234448|gb|CP010309.1|325741-326139 gi|781886788|dbj|AP014653.1|40603-40205 gi|781883823|dbj|AP014652.1|40603-40205 gi|564687648|gb|KC989517.1|6423-6821 gi|537389513|gb|CP003979.1|40604-40206 gi|695227767|ref|NG_041676.1|6423-6821
ARG-ANNOT	Bla|SHV-35|AY070258|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-35:AY070258:1-861:861
CARD	Bla|SHV-35|AY070258|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY070258|0-861|ARO:3001093|SHV-35 [Klebsiella pneumoniae]
Lahey	Bla|SHV-35|AY070258|1-861|861|betalactams|Class_A_betalactamases|SHV	AAL68926.1 AY070258.1:1-861
NCBI	Bla|SHV-35|AY070258|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|18482388|gb|AY070258.1|1-861
Resfinder	Bla|SHV-35|AY070258|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-35_1_AY070258
CARD	Bla|ACT-3_1_EF125013|betalactams|Class_C_betalactamases|ACT	@phgb|EF125013|0-1146|ARO:3001823|ACT-3 [Klebsiella pneumoniae]
Lahey	Bla|ACT-3_1_EF125013|betalactams|Class_C_betalactamases|ACT	ABL67017.1 EF125013.1:1-1146
NCBI	Bla|ACT-3_1_EF125013|betalactams|Class_C_betalactamases|ACT	gi|119362094|gb|EF125013.1|1-1146
Resfinder	Bla|ACT-3_1_EF125013|betalactams|Class_C_betalactamases|ACT	blaACT-3_1_EF125013
ARG-ANNOT	801|AY238971.1|AY238971|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)Cat:AY238971:1055-1741:687;(Phe)CatA10:AY238971:1055-1741:687
CARD	801|AY238971.1|AY238971|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|AY238971|1054-1741|ARO:3002670|cat [Bacillus clausii]
NCBI	801|AY238971.1|AY238971|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|34328601|gb|AY238971.1|1055-1741
Resfinder	801|AY238971.1|AY238971|Phenicol|Chloramphenicol_acetyltransferases|CATA	cat_4_AY238971
CARD	gi|698174169|gb|KM087839.1|betalactams|Class_C_betalactamases|CMY	@phgb|KM087839|0-1146|ARO:3002126|CMY-115 [Citrobacter freundii]
Lahey	gi|698174169|gb|KM087839.1|betalactams|Class_C_betalactamases|CMY	AIT76092.1 KM087839.1:1-1146
NCBI	gi|698174169|gb|KM087839.1|betalactams|Class_C_betalactamases|CMY	gi|698174169|gb|KM087839.1|1-1146
ARG-ANNOT	101|unknown_id|unknown_name|MLS|23S_rRNA_methyltransferases|ERMA	(MLS)ErmA:X03216:4551-5282:732
CARD	101|unknown_id|unknown_name|MLS|23S_rRNA_methyltransferases|ERMA	@phgb|NC_009632|49744-50476|ARO:3000347|ErmA [Staphylococcus aureus subsp. aureus JH1]
NCBI	101|unknown_id|unknown_name|MLS|23S_rRNA_methyltransferases|ERMA	gi|985566378|dbj|LC068959.1|34727-35458 gi|985563902|dbj|AB721404.1|47903-48634 gi|974697948|dbj|AP017320.1|55002-55733 gi|974697948|dbj|AP017320.1|1763438-1764169 gi|974161314|gb|CP012018.1|49511-48780 gi|974161314|gb|CP012018.1|1840761-1841492 gi|974158397|gb|CP012015.1|49514-48783 gi|974155539|gb|CP012013.1|49513-48782 gi|974155539|gb|CP012013.1|1847785-1848516 gi|974152716|gb|CP012012.1|49727-48996 gi|974149849|gb|CP012011.1|49539-48808 gi|974149849|gb|CP012011.1|1890260-1890991 gi|803444476|gb|CP011147.1|49444-50175 gi|803444476|gb|CP011147.1|1667505-1668236 gi|758371776|dbj|AB983237.1|16611-15880
NCBI	gi|146771514|gb|EF576988.1|betalactams|Class_A_betalactamases|CTX	gi|695212498|ref|NG_036425.1|1-1486 gi|529205529|gb|KC788405.1|41495-41384
CARD	CARD|phgb|U46859|22365-24057|ARO:3003049|rosB|Cationic_antimicrobial_peptides|Cationic_antimicrobial_peptide_efflux_pumps|rosB	@phgb|U46859|22365-24057|ARO:3003049|rosB [Yersinia enterocolitica (type O:8)]
NCBI	CARD|phgb|U46859|22365-24057|ARO:3003049|rosB|Cationic_antimicrobial_peptides|Cationic_antimicrobial_peptide_efflux_pumps|rosB	gi|1197638|gb|U46859.1|YEU46859|22366-24058
ARG-ANNOT	gi|160858183|emb|AJ866283.2|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-60:AJ866283:1-861:861
CARD	gi|160858183|emb|AJ866283.2|betalactams|Class_A_betalactamases|SHV	@phgb|AB302939|8-869|ARO:3001115|SHV-60 [Klebsiella pneumoniae]
Lahey	gi|160858183|emb|AJ866283.2|betalactams|Class_A_betalactamases|SHV	CAI30649.2 AJ866283.2:1-861
NCBI	gi|160858183|emb|AJ866283.2|betalactams|Class_A_betalactamases|SHV	gi|160858183|emb|AJ866283.2|1-861 gi|159576919|dbj|AB302939.1|9-869
Resfinder	gi|160858183|emb|AJ866283.2|betalactams|Class_A_betalactamases|SHV	blaSHV-60_1_AB302939
ARG-ANNOT	Bla|SHV-7|U20270|125-985|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-7:U20270:125-985:861
CARD	Bla|SHV-7|U20270|125-985|861|betalactams|Class_A_betalactamases|SHV	@phgb|U20270|124-985|ARO:3001066|SHV-7 [Escherichia coli]
Lahey	Bla|SHV-7|U20270|125-985|861|betalactams|Class_A_betalactamases|SHV	AAA87176.1 U20270.1:125-985
NCBI	Bla|SHV-7|U20270|125-985|861|betalactams|Class_A_betalactamases|SHV	gi|684933|gb|U20270.1|ECU20270|125-985 gi|14532426|gb|AY036620.1|53-88
Resfinder	Bla|SHV-7|U20270|125-985|861|betalactams|Class_A_betalactamases|SHV	blaSHV-7_1_U20270
CARD	AGly|AY138986.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AY138986|0-789|ARO:3002604|aadA4 [Acinetobacter baumannii]
NCBI	AGly|AY138986.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|970567980|dbj|LC107426.1|1329-2117 gi|25044850|gb|AY138986.1|1-789 gi|26655445|gb|AF364344.1|768-1556
NCBI	Phe|AY232670.1|gene3|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|30314008|gb|AY232670.1|4157-3525
ARG-ANNOT	Bla|IMIH|AJ548797|924-1688|765|betalactams|Class_B_betalactamases|CPHA	(Bla)IMIH:AJ548797:924-1688:765
CARD	Bla|IMIH|AJ548797|924-1688|765|betalactams|Class_B_betalactamases|CPHA	@phgb|AJ548797|923-1688|ARO:3003094|imiH [Aeromonas hydrophila]
NCBI	Bla|IMIH|AJ548797|924-1688|765|betalactams|Class_B_betalactamases|CPHA	gi|28798045|emb|AJ548797.1|924-1688
Resfinder	Bla|IMIH|AJ548797|924-1688|765|betalactams|Class_B_betalactamases|CPHA	imiH_1_AJ548797
CARD	CARD|phgb|AB219524.1|1176-4338|ARO:3003699|mexQ|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXQ	@phgb|AB219524.1|1176-4338|ARO:3003699|mexQ [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AB219524.1|1176-4338|ARO:3003699|mexQ|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXQ	gi|68533165|dbj|AB219524.1|1177-4338
NCBI	Fos|fosA_10_EU195449|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|748445536|gb|KP143090.1|1619-1200 gi|544169332|gb|KC960485.1|16197-16616 gi|165928586|gb|EU195449.1|19226-19645
Resfinder	Fos|fosA_10_EU195449|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_10_EU195449
CARD	CARD|pvgb|NC_003112|2157528-2158524|ARO:3000464|Neisseria|Multi-drug_resistance|MDR_mutant_porin_proteins|POR|RequiresSNPConfirmation	@pvgb|NC_003112|2157528-2158524|ARO:3000464|Neisseria gonorrhoeae mutant porin PIB (por) with reduced permeability to antibiotic [Neisseria meningitidis MC58]
NCBI	CARD|pvgb|NC_003112|2157528-2158524|ARO:3000464|Neisseria|Multi-drug_resistance|MDR_mutant_porin_proteins|POR|RequiresSNPConfirmation	gi|325199235|gb|CP002420.1|2126066-2127062 gi|66731897|gb|AE002098.2|2157529-2158525 gi|45212|emb|X65532.1|13-1008 gi|270728226|gb|GQ173977.1|1-862
CARD	Flq|QnrVC1_1_EU436855.2|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	@phgb|EU436855|1401-2058|ARO:3002799|QnrVC1 [Vibrio cholerae]
NCBI	Flq|QnrVC1_1_EU436855.2|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	gi|957647579|dbj|AP017302.1|417356-416700 gi|933686117|gb|KR827393.1|85762-86418 gi|933685907|gb|KR827392.1|4256-3600 gi|933685695|gb|KR827391.1|4336-3680 gi|749800011|gb|KM506769.1|4256-3600 gi|442798064|gb|KC000001.1|2432-3088 gi|429460689|gb|JX861889.1|3123-3779 gi|298399399|gb|HM015625.1|116-772 gi|295979337|gb|EU436855.2|1402-2058 gi|635377387|gb|KJ547693.1|1-493
Resfinder	Flq|QnrVC1_1_EU436855.2|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	QnrVC1_1_EU436855.2
CARD	CARD|phgb|AF197943|0-705|ARO:3000849|Sfh-1|betalactams|Class_B_betalactamases|SFH1	@phgb|AF197943|0-705|ARO:3000849|Sfh-1 [Serratia fonticola]
NCBI	CARD|phgb|AF197943|0-705|ARO:3000849|Sfh-1|betalactams|Class_B_betalactamases|SFH1	gi|6456728|gb|AF197943.1|1-705
CARD	Bla|KF526114.1|gene1|betalactams|Class_C_betalactamases|CMY	@phgb|KF526114|0-1146|ARO:3002113|CMY-101 [Escherichia coli]
Lahey	Bla|KF526114.1|gene1|betalactams|Class_C_betalactamases|CMY	AHA80102.1 KF526114.1:1-1146
NCBI	Bla|KF526114.1|gene1|betalactams|Class_C_betalactamases|CMY	gi|558605690|gb|KF526114.1|1-1146
ARG-ANNOT	Flq|QnrB42|JN680743|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB42:JN680743:1-645:645
CARD	Flq|QnrB42|JN680743|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN680743|0-645|ARO:3002757|QnrB42 [Klebsiella pneumoniae]
NCBI	Flq|QnrB42|JN680743|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|353441557|gb|JN680743.1|1-645
Resfinder	Flq|QnrB42|JN680743|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB42_1_JN680743
ARG-ANNOT	511|unknown_id|unknown_name|betalactams|Class_C_betalactamases|ACC	(Bla)ACC-1:AJ133121:650-1810:1161
CARD	511|unknown_id|unknown_name|betalactams|Class_C_betalactamases|ACC	@phgb|AJ133121|649-1810|ARO:3001815|ACC-1 [Klebsiella pneumoniae]
NCBI	511|unknown_id|unknown_name|betalactams|Class_C_betalactamases|ACC	gi|930190865|emb|LN555650.1|82914-84074 gi|930189590|emb|HG530658.1|82659-83819 gi|168984513|emb|AM939420.1|4787-3627 gi|168984506|emb|AM939419.1|4945-3785 gi|695212501|ref|NG_036426.1|42-1202 gi|695211415|ref|NG_036072.1|5500-4340 gi|695199398|ref|NG_035218.1|3784-2624 gi|695199158|ref|NG_035177.1|650-1810 gi|695211267|ref|NG_036050.1|3257-2097 gi|695211263|ref|NG_036049.1|4201-3041
Resfinder	511|unknown_id|unknown_name|betalactams|Class_C_betalactamases|ACC	blaACC-1_2_AM939420
CARD	CARD|phgb|NZ_AGSO01000004|76451-77432|ARO:3003071|mphE|MLS|Macrolide_phosphotransferases|MPHE	@phgb|NZ_AGSO01000004|76451-77432|ARO:3003071|mphE [Brachybacterium paraconglomeratum LC44]
CARD	CARD|phgb|AP009048|4303042-4304509|ARO:3003550|mdtP|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTP	@phgb|AP009048|4303042-4304509|ARO:3003550|mdtP [Escherichia coli str. K-12 substr. W3110];@phgb|NC_007779|4303042-4304509|ARO:3003550|mdtP [Escherichia coli str. K-12 substr. W3110];@phgb|U00096|4299563-4301030|ARO:3003550|mdtP [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|AP009048|4303042-4304509|ARO:3003550|mdtP|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTP	gi|985000614|gb|CP014225.1|2496653-2498119 gi|958627747|gb|CP013253.1|3703941-3702475 gi|939732440|gb|CP011343.2|4279868-4281334 gi|939731527|gb|CP011342.2|4280554-4282020 gi|937526251|gb|CP012870.1|342089-340623 gi|937521852|gb|CP012869.1|342089-340623 gi|937517453|gb|CP012868.1|342089-340623 gi|932857508|emb|LN877770.1|100323-101789 gi|923416119|gb|CP011113.1|4257629-4259095 gi|899729770|gb|CP012127.1|4273860-4275326
NCBI	1356|AF426161.1|AF426161|betalactams|Class_A_betalactamases|DES1	gi|21306017|gb|AF426161.1|119-1093
Resfinder	1356|AF426161.1|AF426161|betalactams|Class_A_betalactamases|DES1	blaDES-1_1_AF426161
ARG-ANNOT	Flq|QnrB41|JN166690|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB41:JN166690:1-681:681
CARD	Flq|QnrB41|JN166690|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN166690|0-681|ARO:3002756|QnrB41 [Citrobacter freundii]
NCBI	Flq|QnrB41|JN166690|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|342674044|gb|JN166690.1|1-681
Resfinder	Flq|QnrB41|JN166690|1-681|681|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB41_1_JN166690
ARG-ANNOT	Bla|TEM-167|FJ360884|214-1074|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-167:FJ360884:214-1074:861
CARD	Bla|TEM-167|FJ360884|214-1074|861|betalactams|Class_A_betalactamases|TEM	@phgb|FJ360884|213-1074|ARO:3001033|TEM-167 [Escherichia coli]
Lahey	Bla|TEM-167|FJ360884|214-1074|861|betalactams|Class_A_betalactamases|TEM	ACJ04051.1 FJ360884.1:214-1074
NCBI	Bla|TEM-167|FJ360884|214-1074|861|betalactams|Class_A_betalactamases|TEM	gi|209974341|gb|FJ360884.1|214-1074
Resfinder	Bla|TEM-167|FJ360884|214-1074|861|betalactams|Class_A_betalactamases|TEM	blaTEM-167_1_FJ360884
ARG-ANNOT	gi|401716858|gb|JX311308.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-29:JX311308:1-801:801
CARD	gi|401716858|gb|JX311308.1|betalactams|Class_B_betalactamases|VIM	@phgb|JX311308|0-801|ARO:3002299|VIM-29 [Escherichia coli]
Lahey	gi|401716858|gb|JX311308.1|betalactams|Class_B_betalactamases|VIM	AFP99885.1 JX311308.1:1-801
NCBI	gi|401716858|gb|JX311308.1|betalactams|Class_B_betalactamases|VIM	gi|401716858|gb|JX311308.1|1-801
Resfinder	gi|401716858|gb|JX311308.1|betalactams|Class_B_betalactamases|VIM	blaVIM-29_1_JX311308
ARG-ANNOT	Gly|VanS-D|AB242319|689-1834|1146|Glycopeptides|VanD-type_regulator|VANSD	(Gly)VanS-D:AB242319:689-1834:1146
NCBI	Gly|VanS-D|AB242319|689-1834|1146|Glycopeptides|VanD-type_regulator|VANSD	gi|109240378|dbj|AB242319.1|689-1834 gi|54114870|dbj|AB183865.1|1-1146 gi|27461214|gb|AY082011.1|689-738
Resfinder	Gly|VanS-D|AB242319|689-1834|1146|Glycopeptides|VanD-type_regulator|VANSD	VanS-D_1_AB242319
CARD	gi|433285820|emb|HE819401.1|betalactams|Class_C_betalactamases|ACC	@phgb|HE819401|0-1161|ARO:3001819|ACC-5 [Hafnia alvei]
Lahey	gi|433285820|emb|HE819401.1|betalactams|Class_C_betalactamases|ACC	CCK86740.1 HE819401.1:1-1161
NCBI	gi|433285820|emb|HE819401.1|betalactams|Class_C_betalactamases|ACC	gi|433285820|emb|HE819401.1|1-1161
CARD	CARD|phgb|X92945|0-648|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|X92945|0-648|ARO:3002670|cat [Enterococcus faecalis]
NCBI	CARD|phgb|X92945|0-648|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|30267504|gb|AY230218.1|13149-12502 gi|1857519|gb|U83488.1|SAU83488|4276-4923 gi|49071|emb|X65462.1|855-208 gi|12956985|emb|X92945.2|8935-9582 gi|392558|gb|U00453.1|2635-3282
NCBI	MLS|U59450.1|gene2|MLS|23S_rRNA_methyltransferases|ERMV	gi|1927193|gb|U59450.1|SVU59450|384-1176
ARG-ANNOT	MLS|ErmC|M19652|988-1722|735|MLS|23S_rRNA_methyltransferases|ERMC	(MLS)ErmC:M19652:988-1722:735
NCBI	MLS|ErmC|M19652|988-1722|735|MLS|23S_rRNA_methyltransferases|ERMC	gi|153070|gb|M19652.1|STAPT48CG|1722-988 gi|353127779|gb|JF968533.1|150-197
CARD	Phe|D16171.1|gene1|pp-cat|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|D16171|382-1042|ARO:3002689|plasmid encoded cat (pp-cat) [Photobacterium damselae subsp. piscicida]
NCBI	Phe|D16171.1|gene1|pp-cat|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|133905277|gb|CP000603.1|40824-41483 gi|118596719|dbj|AB277723.1|8791-9450 gi|695196877|ref|NG_034555.1|383-1042
CARD	Bla|KJ427797.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KJ427797|0-825|ARO:3001577|OXA-391 [Acinetobacter baumannii]
Lahey	Bla|KJ427797.1|gene1|betalactams|Class_D_betalactamases|OXA	AHN53381.1 KJ427797.1:1-825
NCBI	Bla|KJ427797.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|599089070|gb|KJ427797.1|1-825
CARD	CARD|phgb|EU250284|5415-6510|ARO:3002938|vanSL|Glycopeptides|VanL-type_regulator|VANSL	@phgb|EU250284|5415-6510|ARO:3002938|vanSL [Enterococcus faecalis]
NCBI	CARD|phgb|EU250284|5415-6510|ARO:3002938|vanSL|Glycopeptides|VanL-type_regulator|VANSL	gi|160947039|gb|EU250284.1|5416-6511
ARG-ANNOT	AGly|AadA15|DQ393783|1800-2591|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA15:DQ393783:1800-2591:792
CARD	AGly|AadA15|DQ393783|1800-2591|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|DQ393783|1799-2591|ARO:3002615|aadA15 [Pseudomonas aeruginosa]
NCBI	AGly|AadA15|DQ393783|1800-2591|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|88911239|gb|DQ393783.1|1800-2591
Resfinder	AGly|AadA15|DQ393783|1800-2591|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA15_1_DQ393783
CARD	CARD|phgb|AY055428|20268-21084|ARO:3000412|sul2|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	@phgb|AY055428|20268-21084|ARO:3000412|sul2 [Vibrio cholerae]
NCBI	CARD|phgb|AY055428|20268-21084|ARO:3000412|sul2|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|975007785|gb|CP010832.1|3689-4505 gi|954666075|gb|KT962845.1|18772-19588 gi|971494279|gb|CP010355.1|2969-2153 gi|971339514|gb|CP006662.2|54106-54922 gi|943457735|gb|KT818627.1|109808-110624 gi|969995276|gb|KT317085.1|2162-2978 gi|969868918|gb|CP013690.1|3396110-3395294 gi|959153704|gb|CP012993.1|20916-20100 gi|959147947|gb|CP012988.1|72304-73120 gi|954171665|gb|KT151664.1|78110-77294
ARG-ANNOT	Bla|cphA8|AY261375|1-765|765|betalactams|Class_B_betalactamases|CPHA	(Bla)cphA8:AY261375:1-765:765
CARD	Bla|cphA8|AY261375|1-765|765|betalactams|Class_B_betalactamases|CPHA	@phgb|AY261375|0-765|ARO:3003104|cphA8 [Aeromonas sobria]
NCBI	Bla|cphA8|AY261375|1-765|765|betalactams|Class_B_betalactamases|CPHA	gi|33150461|gb|AY261375.1|1-765
Resfinder	Bla|cphA8|AY261375|1-765|765|betalactams|Class_B_betalactamases|CPHA	cphA8_1_AY261375
NCBI	gi|238801079|gb|FJ971899.1|betalactams|Class_A_betalactamases|CTX	gi|238801079|gb|FJ971899.1|1-926
Lahey	gi|570963934|gb|KF769131.1|betalactams|Class_A_betalactamases|CTX	AHF20911.1 KF769131.1:1-876
NCBI	gi|570963934|gb|KF769131.1|betalactams|Class_A_betalactamases|CTX	gi|570963934|gb|KF769131.1|1-876
ARG-ANNOT	Bla|TEM-148|AM087454|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-148:AM087454:209-1069:861
CARD	Bla|TEM-148|AM087454|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AM087454|208-1069|ARO:3001015|TEM-148 [Escherichia coli]
Lahey	Bla|TEM-148|AM087454|209-1069|861|betalactams|Class_A_betalactamases|TEM	CAJ32372.1 AM087454.1:209-1069
NCBI	Bla|TEM-148|AM087454|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|157676817|emb|AM087454.1|209-1069
Resfinder	Bla|TEM-148|AM087454|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-148_1_AM087454
CARD	gi|544207403|gb|KF203102.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF203102|0-822|ARO:3001516|OXA-328 [Acinetobacter calcoaceticus]
Lahey	gi|544207403|gb|KF203102.1|betalactams|Class_D_betalactamases|OXA	AGW16410.1 KF203102.1:1-822
NCBI	gi|544207403|gb|KF203102.1|betalactams|Class_D_betalactamases|OXA	gi|544207403|gb|KF203102.1|1-822
Resfinder	gi|544207403|gb|KF203102.1|betalactams|Class_D_betalactamases|OXA	blaOXA-328_1_KF203102
CARD	gi|698174177|gb|KM087843.1|betalactams|Class_C_betalactamases|ACT	@phgb|KM087843|0-1146|ARO:3001851|ACT-31 [Enterobacter cloacae]
Lahey	gi|698174177|gb|KM087843.1|betalactams|Class_C_betalactamases|ACT	AIT76096.1 KM087843.1:1-1146
NCBI	gi|698174177|gb|KM087843.1|betalactams|Class_C_betalactamases|ACT	gi|698174177|gb|KM087843.1|1-1146
ARG-ANNOT	Bla|IMP-20|AB196988|1-741|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-20:AB196988:1-741:741
CARD	Bla|IMP-20|AB196988|1-741|741|betalactams|Class_B_betalactamases|IMP	@phgb|AB196988|0-741|ARO:3002211|IMP-20 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-20|AB196988|1-741|741|betalactams|Class_B_betalactamases|IMP	BAD81061.1 AB196988.1:1-741
NCBI	Bla|IMP-20|AB196988|1-741|741|betalactams|Class_B_betalactamases|IMP	gi|56783616|dbj|AB196988.1|1-741
Resfinder	Bla|IMP-20|AB196988|1-741|741|betalactams|Class_B_betalactamases|IMP	blaIMP-20_1_AB196988
CARD	CARD|pvgb|NC_002516.2|2212676-2213309|ARO:3003709|mexZ|Aminoglycosides|Aminoglycoside-resistance_regulator_mutation|MEXZ|RequiresSNPConfirmation	@pvgb|NC_002516.2|2212676-2213309|ARO:3003709|mexZ [Pseudomonas aeruginosa PAO1]
NCBI	CARD|pvgb|NC_002516.2|2212676-2213309|ARO:3003709|mexZ|Aminoglycosides|Aminoglycoside-resistance_regulator_mutation|MEXZ|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|3303162-3302530 gi|553895034|gb|CP006832.1|2212672-2213304 gi|553886202|gb|CP006831.1|2212672-2213304 gi|543879514|gb|CP006705.1|2212560-2213192 gi|110227054|gb|AE004091.2|2212677-2213309 gi|6502949|gb|AF147719.1|AF147719|855-223 gi|3769481|gb|AF073776.1|AF073776|633-1
NCBI	Sul|NC_002163.1.904908|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|938159898|gb|CP012696.1|545611-546753 gi|780862670|gb|CP003871.3|543985-545127 gi|756103065|gb|CP010301.1|548585-549727 gi|756089737|gb|CP010072.1|586335-587477 gi|690551456|gb|CP006729.2|583098-584240 gi|690545238|gb|CP006709.2|583100-584242 gi|690532631|gb|CP006708.2|544545-545687 gi|690532129|gb|CP006707.2|583099-584241 gi|589078008|gb|CP006689.1|544185-545327 gi|589076343|gb|CP006688.1|544182-545324
NCBI	Bla|SFO-1_1_AB003148|betalactams|Class_A_betalactamases|SFO	gi|695226697|ref|NG_041558.1|1960-2847 gi|695214136|ref|NG_036740.1|5727-6614 gi|695199041|ref|NG_035150.1|1418-2305
Resfinder	Bla|SFO-1_1_AB003148|betalactams|Class_A_betalactamases|SFO	blaSFO-1_1_AB003148
CARD	CARD|phgb|AHFH01000066|19120-20020|ARO:3000318|mphB|MLS|Macrolide_phosphotransferases|MPHB	@phgb|AHFH01000066|19120-20020|ARO:3000318|mphB [Bacillus cereus VD156]
NCBI	Mdr|NC_002745.1123448|Methicillin|Multi-drug_resistance|MDR_regulator|MGRA	gi|984671414|emb|LT009690.1|722847-722404 gi|930584899|dbj|AP014942.1|707895-707452 gi|929858715|gb|CP010402.1|722486-722043 gi|927048389|gb|CP010890.1|691001-690558 gi|925190036|gb|CP012593.1|744116-743673 gi|827443540|gb|CP011528.1|686570-686127 gi|803444476|gb|CP011147.1|728900-728457 gi|781886788|dbj|AP014653.1|716755-716312 gi|781883823|dbj|AP014652.1|716755-716312 gi|777211012|emb|LN831036.1|726972-726529
ARG-ANNOT	Bla|ACC-2|AF180952|1565-2737|1173|betalactams|Class_C_betalactamases|ACC	(Bla)ACC-2:AF180952:1565-2737:1173
CARD	Bla|ACC-2|AF180952|1565-2737|1173|betalactams|Class_C_betalactamases|ACC	@phgb|AF180952|1564-2737|ARO:3001816|ACC-2 [Hafnia alvei]
Lahey	Bla|ACC-2|AF180952|1565-2737|1173|betalactams|Class_C_betalactamases|ACC	AAF86691.1 AF180952.1:1565-2737
NCBI	Bla|ACC-2|AF180952|1565-2737|1173|betalactams|Class_C_betalactamases|ACC	gi|9294813|gb|AF180952.1|AF180952|1565-2737
Resfinder	Bla|ACC-2|AF180952|1565-2737|1173|betalactams|Class_C_betalactamases|ACC	blaACC-2_1_AF180952
CARD	gi|558607391|gb|KF513178.1|betalactams|Class_A_betalactamases|SHV	@phgb|KF513178|0-861|ARO:3001357|SHV-173 [Klebsiella pneumoniae]
Lahey	gi|558607391|gb|KF513178.1|betalactams|Class_A_betalactamases|SHV	AHA80959.1 KF513178.1:1-861
NCBI	gi|558607391|gb|KF513178.1|betalactams|Class_A_betalactamases|SHV	gi|558607391|gb|KF513178.1|1-861
Resfinder	gi|558607391|gb|KF513178.1|betalactams|Class_A_betalactamases|SHV	blaSHV-173_1_KF513178
NCBI	Bla|CTX-M-1_4_AJ416342|betalactams|Class_A_betalactamases|CTX	gi|695213670|ref|NG_036643.1|2087-2962 gi|695213667|ref|NG_036642.1|1115-1990 gi|16304817|emb|AJ416342.1|515-1390 gi|16304811|emb|AJ416340.1|595-1470 gi|933686806|gb|KT779550.1|2454-1581 gi|848613079|gb|KR494248.1|85037-84164 gi|822874760|gb|KM052220.1|32297-33170 gi|756791690|gb|KM377240.1|86734-87607 gi|756791559|gb|KM377239.1|98932-99805 gi|756791433|gb|KM377238.1|92102-91229
Resfinder	Bla|CTX-M-1_4_AJ416342|betalactams|Class_A_betalactamases|CTX	blaCTX-M-1_4_AJ416342
NCBI	Bla|SHV-1_11_EF035565|betalactams|Class_A_betalactamases|SHV	gi|74058436|gb|DQ166781.1|1-861 gi|940656576|gb|CP012883.1|5133963-5133105 gi|728797461|emb|LN515533.1|9-867 gi|160948460|emb|AM176558.2|3-861
Resfinder	Bla|SHV-1_11_EF035565|betalactams|Class_A_betalactamases|SHV	blaSHV-1_11_EF035565
ARG-ANNOT	Bla|TEM-72|AF157553|147-1008|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-72:AF157553:148-1008:861
CARD	Bla|TEM-72|AF157553|147-1008|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF157553|147-1008|ARO:3000938|TEM-72 [Morganella morganii]
Lahey	Bla|TEM-72|AF157553|147-1008|861|betalactams|Class_A_betalactamases|TEM	AAF19151.1 AF157553.1:148-1008
NCBI	Bla|TEM-72|AF157553|147-1008|861|betalactams|Class_A_betalactamases|TEM	gi|695199351|ref|NG_035209.1|148-1008
Resfinder	Bla|TEM-72|AF157553|147-1008|861|betalactams|Class_A_betalactamases|TEM	blaTEM-72_1_AF157553
NCBI	gi|68137405|gb|DQ075245.1|betalactams|Class_A_betalactamases|TEM	gi|68137405|gb|DQ075245.1|1-1078 gi|961666360|gb|KT185451.1|87741-87690
NCBI	Sul|sul2_9_FJ197818|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|224184694|gb|FJ197818.1|1663-2514 gi|189916535|gb|CP001093.1|1783-2634 gi|150499|gb|M83717.1|PASAMR|127-978 gi|975007785|gb|CP010832.1|4504-3690 gi|975007785|gb|CP010832.1|3652-3615 gi|954666075|gb|KT962845.1|19587-18773 gi|954666075|gb|KT962845.1|18735-18698 gi|971494279|gb|CP010355.1|2154-2968 gi|971339514|gb|CP006662.2|54921-54107 gi|971339514|gb|CP006662.2|54069-54032 gi|943457735|gb|KT818627.1|110623-109809 gi|943457735|gb|KT818627.1|109771-109734 gi|969995276|gb|KT317085.1|2977-2163
Resfinder	Sul|sul2_9_FJ197818|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_9_FJ197818
ARG-ANNOT	Bla|IMIS|Y10415|126-893|768|betalactams|Class_B_betalactamases|CPHA	(Bla)IMIS:Y10415:126-893:768
CARD	Bla|IMIS|Y10415|126-893|768|betalactams|Class_B_betalactamases|CPHA	@phgb|Y10415|125-893|ARO:3003095|imiS [Aeromonas veronii]
NCBI	Bla|IMIS|Y10415|126-893|768|betalactams|Class_B_betalactamases|CPHA	gi|2292738|emb|Y10415.1|126-893
Resfinder	Bla|IMIS|Y10415|126-893|768|betalactams|Class_B_betalactamases|CPHA	imiS_1_Y10415
NCBI	gi|407731522|gb|JX440352.1|betalactams|Class_C_betalactamases|CMY	gi|407731522|gb|JX440352.1|1028-2255
ARG-ANNOT	Bla|cfiA4|AB087229|1-750|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA4:AB087229:1-750:750;(Bla)CfiA5:AB087230:1-750:750;(Bla)cfiA7:AB087232:1-750:750;(Bla)cfiA11:FM200784:162-911:750
NCBI	Bla|cfiA4|AB087229|1-750|750|betalactams|Class_B_betalactamases|CFIA	gi|336317744|gb|JF795576.1|1786-2535 gi|336317741|gb|JF795575.1|1800-2549 gi|238908258|emb|FM200784.1|162-911 gi|22091063|dbj|AB087229.1|1-750
Resfinder	Bla|cfiA4|AB087229|1-750|750|betalactams|Class_B_betalactamases|CFIA	cfiA4_1_AB087229
ARG-ANNOT	Bla|SHV-1|AF148850|6-866|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-1:AF148850:6-866:861
NCBI	Bla|SHV-1|AF148850|6-866|861|betalactams|Class_A_betalactamases|SHV	gi|5002311|gb|AF148850.1|AF148850|6-867 gi|562889800|gb|KF585134.1|48-908 gi|695220752|ref|NG_039547.1|77-937 gi|133905277|gb|CP000603.1|142440-141580 gi|94502885|gb|DQ478720.1|1-861 gi|4337047|gb|AF124984.1|AF124984|199-1059
CARD	CARD|pvgb|AL123456|412756-414238|ARO:3003451|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol-resistant_iniC|INIC|RequiresSNPConfirmation	@pvgb|AL123456|412756-414238|ARO:3003451|Mycobacterium tuberculosis iniC mutant conferring resistance to ethambutol [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|412756-414238|ARO:3003451|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol-resistant_iniC|INIC|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|415946-417428 gi|984989958|gb|CP010339.1|415727-417209 gi|984985728|gb|CP010338.1|415838-417320 gi|984981517|gb|CP010337.1|415816-417298 gi|984976917|gb|CP010336.1|410929-412411 gi|984967653|gb|CP010334.1|410216-411698 gi|984959134|gb|CP010332.1|413870-415352 gi|984954355|gb|CP010331.1|413756-415238 gi|984950177|gb|CP010330.1|412722-414204 gi|984945858|gb|CP010329.1|412720-414202
CARD	1157|AB916359.1|AB916359|betalactams|Class_A_betalactamases|CTX	@phgb|AB916359|793-1708|ARO:3002008|CTX-M-151 [Salmonella enterica]
Lahey	1157|AB916359.1|AB916359|betalactams|Class_A_betalactamases|CTX	BAP34782.1 AB916359.1:794-1708
NCBI	1157|AB916359.1|AB916359|betalactams|Class_A_betalactamases|CTX	gi|674651380|dbj|AB916359.1|794-1708 gi|226092535|dbj|AP008955.1|2748481-2748454
ARG-ANNOT	Bla|CTX-M-60|AM411407|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-60:AM411407:1-876:876
CARD	Bla|CTX-M-60|AM411407|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AM411407|0-876|ARO:3001921|CTX-M-60 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-60|AM411407|1-876|876|betalactams|Class_A_betalactamases|CTX	CAL80726.1 AM411407.1:1-876
NCBI	Bla|CTX-M-60|AM411407|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|121495528|emb|AM411407.1|1-876
Resfinder	Bla|CTX-M-60|AM411407|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-60_1_AM411407
ARG-ANNOT	Gly|VanRc4|EU151753|3848-4543|696|Glycopeptides|VanC-type_regulator|VANRC	(Gly)VanRc4:EU151753:3848-4543:696
NCBI	Gly|VanRc4|EU151753|3848-4543|696|Glycopeptides|VanC-type_regulator|VANRC	gi|161779851|gb|EU151753.1|3848-4543
Resfinder	Gly|VanRc4|EU151753|3848-4543|696|Glycopeptides|VanC-type_regulator|VANRC	VanR-C_4_EU151753
CARD	CARD|phgb|KF147862|0-654|ARO:3000559|adeN|Multi-drug_resistance|MDR_regulator|ADEN	@phgb|KF147862|0-654|ARO:3000559|adeN [Acinetobacter baumannii]
NCBI	CARD|phgb|KF147862|0-654|ARO:3000559|adeN|Multi-drug_resistance|MDR_regulator|ADEN	gi|541905542|gb|KF147862.1|1-654
CARD	CARD|phgb|EU250284|2574-3564|ARO:3002973|vanTmL|Glycopeptides|VanL-type_resistance_protein|VANTML	@phgb|EU250284|2574-3564|ARO:3002973|vanTmL [Enterococcus faecalis]
NCBI	CARD|phgb|EU250284|2574-3564|ARO:3002973|vanTmL|Glycopeptides|VanL-type_resistance_protein|VANTML	gi|160947039|gb|EU250284.1|2575-3565
ARG-ANNOT	gi|42406212|gb|AY524987.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-8:AY524987:1-801:801
CARD	gi|42406212|gb|AY524987.1|betalactams|Class_B_betalactamases|VIM	@phgb|AY524987|0-801|ARO:3002278|VIM-8 [Pseudomonas aeruginosa]
Lahey	gi|42406212|gb|AY524987.1|betalactams|Class_B_betalactamases|VIM	AAS13759.1 AY524987.1:1-801
NCBI	gi|42406212|gb|AY524987.1|betalactams|Class_B_betalactamases|VIM	gi|42406212|gb|AY524987.1|1-801
Resfinder	gi|42406212|gb|AY524987.1|betalactams|Class_B_betalactamases|VIM	blaVIM-8_1_AY524987
ARG-ANNOT	Flq|QnrB36|JN173058|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB36:JN173058:37-681:645
CARD	Flq|QnrB36|JN173058|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN173058|36-681|ARO:3002751|QnrB36 [Citrobacter freundii]
NCBI	Flq|QnrB36|JN173058|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|341873898|gb|JN173058.1|37-681
Resfinder	Flq|QnrB36|JN173058|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB36_1_JN173058
CARD	CARD|pvgb|AL450380|7317-11067|ARO:3003298|Mycobaterium|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	@pvgb|AL450380|7317-11067|ARO:3003298|Mycobaterium leprae gyrA conferring resistance to fluoroquinolones [Mycobacterium leprae TN]
NCBI	CARD|pvgb|AL450380|7317-11067|ARO:3003298|Mycobaterium|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|13092412|emb|AL583917.1|7318-11068
CARD	CARD|phgb|L29045|259-700|ARO:3002557|AAC6-PRIME-Ij|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|L29045|259-700|ARO:3002557|AAC(6')-Ij [Acinetobacter genomosp. 13]
NCBI	CARD|phgb|L29045|259-700|ARO:3002557|AAC6-PRIME-Ij|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|547388|gb|L29045.1|ACCAAC6IJ|260-701
NCBI	Bla|CTX-M-14_4_EU274579|betalactams|Class_A_betalactamases|CTX	gi|161367439|gb|EU274579.1|1-876 gi|909636667|emb|LN850164.1|120961-121834 gi|805300500|gb|KP025948.1|33151-32278 gi|751373027|gb|KM580532.1|34173-35046 gi|514058406|gb|JX981514.1|30331-31204 gi|512493214|gb|KC577200.1|879-6 gi|479327067|gb|KC354801.1|26361-25488 gi|695214643|ref|NG_036860.1|1470-2343 gi|695214629|ref|NG_036857.1|513-1386 gi|86161573|gb|DQ359215.1|1-874
Resfinder	Bla|CTX-M-14_4_EU274579|betalactams|Class_A_betalactamases|CTX	blaCTX-M-14b_4_EU274579
CARD	MLS|ereA_2_AF099140|MLS|Macrolide_esterases|EREA	@phgb|AF099140|136-1363|ARO:3002826|EreA2 [Providencia stuartii]
NCBI	MLS|ereA_2_AF099140|MLS|Macrolide_esterases|EREA	gi|659224503|gb|KJ668707.1|2797-4023 gi|659224503|gb|KJ668707.1|918-1105 gi|636631868|gb|KJ546444.1|721-1947 gi|636631799|gb|KJ543550.1|721-1947 gi|404515556|gb|JX297812.1|640-1866 gi|221047974|gb|FJ591050.1|700-1926 gi|156186306|gb|EU085376.1|682-1908 gi|56182558|gb|AY827837.1|716-1942 gi|66863972|dbj|AB188269.1|741-1967 gi|695198806|ref|NG_035084.1|137-1363 gi|954629879|gb|CP013215.1|276726-275684 gi|954629879|gb|CP013215.1|280834-280647
Resfinder	MLS|ereA_2_AF099140|MLS|Macrolide_esterases|EREA	ere(A)_2_AF099140
ARG-ANNOT	509|unknown_id|unknown_name|betalactams|Class_A_betalactamases|SCO	(Bla)SCO-1:AM939419:c2458-1592:867
NCBI	509|unknown_id|unknown_name|betalactams|Class_A_betalactamases|SCO	gi|752502612|dbj|AP014611.1|55531-54665 gi|284433120|gb|GU256641.1|67005-66139 gi|168984520|emb|AM939421.1|2280-1414 gi|168984513|emb|AM939420.1|2300-1434 gi|168984506|emb|AM939419.1|2458-1592 gi|119434064|gb|EF063111.1|1122-1988 gi|695212159|ref|NG_036339.1|2360-1494 gi|695199398|ref|NG_035218.1|1297-431 gi|695211168|ref|NG_036032.1|3118-2252 gi|695211162|ref|NG_036031.1|3675-2809
ARG-ANNOT	1295|AF091113.2|AF091113|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-67:AF091113:451-1311:861
CARD	1295|AF091113.2|AF091113|betalactams|Class_A_betalactamases|TEM	@phgb|AF091113|450-1311|ARO:3000934|TEM-67 [Proteus mirabilis]
Lahey	1295|AF091113.2|AF091113|betalactams|Class_A_betalactamases|TEM	AAD33116.2 AF091113.2:451-1311
NCBI	1295|AF091113.2|AF091113|betalactams|Class_A_betalactamases|TEM	gi|695209086|ref|NG_035721.1|451-1311
Resfinder	1295|AF091113.2|AF091113|betalactams|Class_A_betalactamases|TEM	blaTEM-67_1_AF091113
CARD	CARD|pvgb|CP003583|914819-915452|ARO:3003078|Enterococcus|Lipopeptides|Daptomycin-resistant_liaFSR|LIAFSR|RequiresSNPConfirmation	@pvgb|CP003583|914819-915452|ARO:3003078|Enterococcus faecium liaR mutant conferring daptomycin resistance [Enterococcus faecium DO]
NCBI	CARD|pvgb|CP003583|914819-915452|ARO:3003078|Enterococcus|Lipopeptides|Daptomycin-resistant_liaFSR|LIAFSR|RequiresSNPConfirmation	gi|974999704|gb|CP013994.1|1818486-1817853 gi|529202214|gb|CP006620.1|968662-969295 gi|388532432|gb|CP003583.1|914820-915453 gi|378937014|gb|CP003351.1|1401260-1400627 gi|674114364|gb|CP007573.1|1658715-1658688
CARD	CARD|phgb|AP009048|4337959-4338628|ARO:3003582|PmrA|Cationic_antimicrobial_peptides|Polymyxin_B_resistance_regulator|pmrA	@phgb|AP009048|4337959-4338628|ARO:3003582|PmrA [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|AP009048|4337959-4338628|ARO:3003582|PmrA|Cationic_antimicrobial_peptides|Polymyxin_B_resistance_regulator|pmrA	gi|985000614|gb|CP014225.1|2530371-2531040 gi|958627747|gb|CP013253.1|3670627-3669958 gi|939732440|gb|CP011343.2|4313286-4313955 gi|939731527|gb|CP011342.2|4313972-4314641 gi|937526251|gb|CP012870.1|308371-307702 gi|937521852|gb|CP012869.1|308371-307702 gi|937517453|gb|CP012868.1|308371-307702 gi|932857508|emb|LN877770.1|134001-134670 gi|923416119|gb|CP011113.1|4291347-4292016 gi|899729770|gb|CP012127.1|4307578-4308247
ARG-ANNOT	661|JQ808129.1|JQ808129|Aminoglycosides|16S_rRNA_methyltransferases|RMTF	(AGly)RmtF:JQ808129:55-876:822
CARD	661|JQ808129.1|JQ808129|Aminoglycosides|16S_rRNA_methyltransferases|RMTF	@phgb|JQ808129|1598-2378|ARO:3002666|rmtF [Klebsiella pneumoniae]
NCBI	661|JQ808129.1|JQ808129|Aminoglycosides|16S_rRNA_methyltransferases|RMTF	gi|958108507|emb|LN824138.1|9145-9924 gi|958102843|emb|LN824133.1|2814416-2815195 gi|550602065|gb|KF295829.1|120364-121143 gi|695214903|ref|NG_036913.1|5128-5907 gi|493665175|dbj|AP012055.1|53975-53196 gi|695226706|ref|NG_041561.1|1599-2378
Resfinder	661|JQ808129.1|JQ808129|Aminoglycosides|16S_rRNA_methyltransferases|RMTF	rmtf_1_JQ808129
ARG-ANNOT	592|HQ424460.1|HQ424460|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-IIc:HQ424460:2-805:804
CARD	592|HQ424460.1|HQ424460|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|HQ424460|1-805|ARO:3002646|APH(3')-IIc [Stenotrophomonas maltophilia]
NCBI	592|HQ424460.1|HQ424460|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|312191070|gb|HQ424460.1|2-805
CARD	Mdr|AP009048.1|gene2135|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTD	@phgb|U00096|2161463-2162879|ARO:3001330|mdtD [Escherichia coli str. K-12 substr. MG1655]
NCBI	Mdr|AP009048.1|gene2135|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTD	gi|985000614|gb|CP014225.1|358663-360078 gi|939732440|gb|CP011343.2|2141621-2143036 gi|939731527|gb|CP011342.2|2142317-2143732 gi|937526251|gb|CP012870.1|2480190-2478775 gi|937521852|gb|CP012869.1|2480190-2478775 gi|937517453|gb|CP012868.1|2480190-2478775 gi|932857508|emb|LN877770.1|2525498-2526913 gi|923416119|gb|CP011113.1|2124326-2125741 gi|899729770|gb|CP012127.1|2142655-2144070 gi|899725419|gb|CP012126.1|2145269-2146684
NCBI	gi|508128869|gb|KC964871.1|betalactams|Class_A_betalactamases|CTX	gi|508128869|gb|KC964871.1|1-884
ARG-ANNOT	333|AY509111.1|AY509111|Multi-drug_resistance|Multi-drug_efflux_pumps|DRRA	(Tet)OtrC:AY509111:324-1379:1056
CARD	333|AY509111.1|AY509111|Multi-drug_resistance|Multi-drug_efflux_pumps|DRRA	@phgb|AY509111|0-1056|ARO:3002894|otrC [Streptomyces rimosus]
NCBI	333|AY509111.1|AY509111|Multi-drug_resistance|Multi-drug_efflux_pumps|DRRA	gi|40850656|gb|AY509111.1|324-1379
Resfinder	333|AY509111.1|AY509111|Multi-drug_resistance|Multi-drug_efflux_pumps|DRRA	otr(C)_1_AY509111
ARG-ANNOT	Bla|GOB-16|GU188443|1-873|873|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-16:GU188443:1-873:873
NCBI	Bla|GOB-16|GU188443|1-873|873|betalactams|Class_B_betalactamases|GOB	gi|270311269|gb|GU188443.1|1-873
Resfinder	Bla|GOB-16|GU188443|1-873|873|betalactams|Class_B_betalactamases|GOB	blaGOB-16_1_GU188443
ARG-ANNOT	AGly|AadE-Pp|HE577054|1299623-1300477|855|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	(AGly)AadE-Pp:HE577054:1299623-1300477:855
NCBI	AGly|AadE-Pp|HE577054|1299623-1300477|855|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|788573619|gb|CP002213.2|1300939-1301793 gi|343094728|emb|HE577054.1|1299623-1300477
CARD	CARD|phgb|ACNI01000036|30014-30740|ARO:3003072|Bacillus|MLS|Macrolide_phosphotransferases|MPH	@phgb|ACNI01000036|30014-30740|ARO:3003072|Bacillus intrinsic mph [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
NCBI	1899|AM932669.1|AM932669|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|984881271|gb|CP014215.1|2293487-2292708 gi|984881271|gb|CP014215.1|2306251-2305472 gi|974751547|gb|KU130294.1|205895-205116 gi|974022331|gb|CP013924.1|1440246-1441025 gi|973715451|gb|CP013836.1|109155-108376 gi|969995259|gb|KT317079.1|2327-3106 gi|969995242|gb|KT317078.1|4213-4992 gi|969995220|gb|KT317076.1|5188-5967 gi|969995200|gb|KT317075.1|7074-7853 gi|969972869|gb|KT354506.1|6179-6958 gi|953773532|gb|CP013224.1|40663-39884
CARD	gi|558500530|gb|KF663615.1|betalactams|Class_A_betalactamases|TEM	@phgb|KF663615|0-858|ARO:3001390|TEM-213 [Pseudomonas aeruginosa]
Lahey	gi|558500530|gb|KF663615.1|betalactams|Class_A_betalactamases|TEM	AHA58207.1 KF663615.1:1-858
NCBI	gi|558500530|gb|KF663615.1|betalactams|Class_A_betalactamases|TEM	gi|558500530|gb|KF663615.1|1-858
Resfinder	gi|558500530|gb|KF663615.1|betalactams|Class_A_betalactamases|TEM	blaTEM-213_1_KF663615
NCBI	ACou|NC_008702.1.4609137|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|119668705|emb|AM406670.1|1203248-1201275 gi|237624339|gb|CP001281.2|3523938-3523911
CARD	CARD|phgb|AY509120|22652-23495|ARO:3001302|chrB|MLS|23S_rRNA_methyltransferases|CHRB	@phgb|AY509120|22652-23495|ARO:3001302|chrB [Streptomyces bikiniensis]
NCBI	CARD|phgb|AY509120|22652-23495|ARO:3001302|chrB|MLS|23S_rRNA_methyltransferases|CHRB	gi|45934774|gb|AY509120.1|22653-23496
ARG-ANNOT	Bla|SHV-76|AM176551|31-891|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-76:AM176551:31-891:861
CARD	Bla|SHV-76|AM176551|31-891|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176551|30-891|ARO:3001130|SHV-76 [Klebsiella pneumoniae]
Lahey	Bla|SHV-76|AM176551|31-891|861|betalactams|Class_A_betalactamases|SHV	CAJ47131.2 AM176551.2:31-891
NCBI	Bla|SHV-76|AM176551|31-891|861|betalactams|Class_A_betalactamases|SHV	gi|160948442|emb|AM176551.2|31-891 gi|124263629|gb|EF210158.1|35-895
Resfinder	Bla|SHV-76|AM176551|31-891|861|betalactams|Class_A_betalactamases|SHV	blaSHV-76_1_AM176551
ARG-ANNOT	Bla|SHV-79|AM176554|31-891|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-79:AM176554:31-891:861
CARD	Bla|SHV-79|AM176554|31-891|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176554|30-891|ARO:3001133|SHV-79 [Klebsiella pneumoniae]
Lahey	Bla|SHV-79|AM176554|31-891|861|betalactams|Class_A_betalactamases|SHV	CAJ47134.2 AM176554.2:31-891
NCBI	Bla|SHV-79|AM176554|31-891|861|betalactams|Class_A_betalactamases|SHV	gi|160948452|emb|AM176554.2|31-891
Resfinder	Bla|SHV-79|AM176554|31-891|861|betalactams|Class_A_betalactamases|SHV	blaSHV-79_1_AM176554
Lahey	gi|829027062|gb|KP410856.1|betalactams|Class_D_betalactamases|OXA	AKL59536.1 KP410856.1:1-828
NCBI	gi|829027062|gb|KP410856.1|betalactams|Class_D_betalactamases|OXA	gi|829027062|gb|KP410856.1|1-828 gi|908777896|gb|KT022421.1|33-1
ARG-ANNOT	Bla|OXA-20|AF024602|1238-2038|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-20:AF024602:1238-2038:801
Lahey	Bla|OXA-20|AF024602|1238-2038|801|betalactams|Class_D_betalactamases|OXA	AAC23554.1 AF024602.1:1238-2038
NCBI	Bla|OXA-20|AF024602|1238-2038|801|betalactams|Class_D_betalactamases|OXA	gi|219872982|gb|FJ445404.1|2131-2931 gi|3220157|gb|AF024602.1|AF024602|1238-2038 gi|209981013|gb|EU503121.1|7854-8164
Resfinder	Bla|OXA-20|AF024602|1238-2038|801|betalactams|Class_D_betalactamases|OXA	blaOXA-20_1_AF024602
NCBI	Tet|tet40_1_FJ158002|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	gi|295089810|emb|FP929037.1|530945-529725 gi|162417574|emb|AJ295238.3|2134-3354 gi|379125718|gb|JQ280445.2|3221-3296
Resfinder	Tet|tet40_1_FJ158002|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET40	tet(40)_1_FJ158002
NCBI	Sul|sul1_32_EF592571|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695212518|ref|NG_036429.1|2846-3685
Resfinder	Sul|sul1_32_EF592571|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_32_EF592571
ARG-ANNOT	Bla|IND-2b|EF672681|1-732|732|betalactams|Class_B_betalactamases|IND	(Bla)IND-2b:EF672681::1-732:732
NCBI	Bla|IND-2b|EF672681|1-732|732|betalactams|Class_B_betalactamases|IND	gi|152143854|gb|EF672681.1|1-732
Resfinder	Bla|IND-2b|EF672681|1-732|732|betalactams|Class_B_betalactamases|IND	blaIND-2b_3_EF672681
ARG-ANNOT	Phe|FexA|JQ041372|14024-15451|1428|Phenicol|Phenicol_efflux_pumps|FEXA	(Phe)FexA:JQ041372:14024-15451:1428
NCBI	Phe|FexA|JQ041372|14024-15451|1428|Phenicol|Phenicol_efflux_pumps|FEXA	gi|768965536|gb|KM521837.1|28286-26859 gi|695226530|ref|NG_041533.1|15451-14024 gi|348605343|gb|JF834909.1|15452-14025
ARG-ANNOT	Bla|TEM-126|AY628199|204-1064|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-126:AY628199:204-1064:861
CARD	Bla|TEM-126|AY628199|204-1064|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY628199|203-1064|ARO:3000988|TEM-126 [Escherichia coli]
Lahey	Bla|TEM-126|AY628199|204-1064|861|betalactams|Class_A_betalactamases|TEM	AAT45742.1 AY628199.1:204-1064
NCBI	Bla|TEM-126|AY628199|204-1064|861|betalactams|Class_A_betalactamases|TEM	gi|48527203|gb|AY628199.1|204-1064
Resfinder	Bla|TEM-126|AY628199|204-1064|861|betalactams|Class_A_betalactamases|TEM	blaTEM-126_1_AY628199
CARD	CARD|phgb|AF347054|208-1069|ARO:3000947|TEM-80|betalactams|Class_A_betalactamases|TEM	@phgb|AF347054|208-1069|ARO:3000947|TEM-80 [Enterobacter cloacae]
NCBI	CARD|phgb|AF347054|208-1069|ARO:3000947|TEM-80|betalactams|Class_A_betalactamases|TEM	gi|20198332|gb|AF347054.1|209-1070
ARG-ANNOT	gi|378939968|gb|JN935136.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-194:JN935136:1-861:861
CARD	gi|378939968|gb|JN935136.1|betalactams|Class_A_betalactamases|TEM	@phgb|JN935136|0-861|ARO:3001054|TEM-194 [Acinetobacter baumannii]
Lahey	gi|378939968|gb|JN935136.1|betalactams|Class_A_betalactamases|TEM	AFC75524.1 JN935136.1:1-861
NCBI	gi|378939968|gb|JN935136.1|betalactams|Class_A_betalactamases|TEM	gi|378939968|gb|JN935136.1|1-861
Resfinder	gi|378939968|gb|JN935136.1|betalactams|Class_A_betalactamases|TEM	blaTEM-194_1_JN935136
NCBI	gi|53854915|gb|AY743434.1|betalactams|Class_C_betalactamases|CMY	gi|53854915|gb|AY743434.1|1-1203
CARD	CARD|phgb|NC_002516|5151077-5154209|ARO:3000801|mexD|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXD	@phgb|NC_002516|5151077-5154209|ARO:3000801|mexD [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516|5151077-5154209|ARO:3000801|mexD|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXD	gi|926451317|emb|LN871187.1|5151069-5154201 gi|553895034|gb|CP006832.1|5151073-5154205 gi|553886202|gb|CP006831.1|5152158-5155290 gi|543879514|gb|CP006705.1|4930658-4933790 gi|110227054|gb|AE004091.2|5151078-5154210
CARD	CARD|phgb|HQ433550|0-1020|ARO:3000813|mexS|Multi-drug_resistance|MDR_regulator|MEXS	@phgb|HQ433550|0-1020|ARO:3000813|mexS [Pseudomonas aeruginosa PAK]
NCBI	CARD|phgb|HQ433550|0-1020|ARO:3000813|mexS|Multi-drug_resistance|MDR_regulator|MEXS	gi|314912691|gb|HQ433550.1|1-1020
ARG-ANNOT	gi|23953862|gb|AY143430.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-24:AY143430:1-876:876
CARD	gi|23953862|gb|AY143430.1|betalactams|Class_A_betalactamases|CTX	@phgb|AY143430|0-876|ARO:3001886|CTX-M-24 [Klebsiella pneumoniae]
Lahey	gi|23953862|gb|AY143430.1|betalactams|Class_A_betalactamases|CTX	AAN38836.1 AY143430.1:1-876
NCBI	gi|23953862|gb|AY143430.1|betalactams|Class_A_betalactamases|CTX	gi|530347473|gb|CP006657.1|128344-127469 gi|399228977|gb|JX306033.1|1294-2169 gi|221149283|gb|EU418917.1|64-939 gi|165928586|gb|EU195449.1|23189-24064 gi|147712677|gb|EF570050.1|154-1029 gi|23953862|gb|AY143430.1|1-876
Resfinder	gi|23953862|gb|AY143430.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-24_2_EF570050
NCBI	Flq|NC_012491.1.7717618|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|226092535|dbj|AP008955.1|17306-19840
ARG-ANNOT	Bla|OXA-235|JQ820240|591-1421|831|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-235:JQ820240:591-1421:831
CARD	Bla|OXA-235|JQ820240|591-1421|831|betalactams|Class_D_betalactamases|OXA	@phgb|JQ820240|590-1421|ARO:3001676|OXA-235 [Acinetobacter baumannii]
Lahey	Bla|OXA-235|JQ820240|591-1421|831|betalactams|Class_D_betalactamases|OXA	AFH36330.1 JQ820240.2:591-1421
NCBI	Bla|OXA-235|JQ820240|591-1421|831|betalactams|Class_D_betalactamases|OXA	gi|725881250|gb|CP007712.1|1476077-1475247 gi|443418012|gb|JQ820240.2|591-1421
Resfinder	Bla|OXA-235|JQ820240|591-1421|831|betalactams|Class_D_betalactamases|OXA	blaOXA-235_1_JQ820240
ARG-ANNOT	Bla|TEM-129|AY452662|184-1044|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-129:AY452662:184-1044:861
NCBI	Bla|TEM-129|AY452662|184-1044|861|betalactams|Class_A_betalactamases|TEM	gi|695210307|ref|NG_035926.1|184-1044
Resfinder	Bla|TEM-129|AY452662|184-1044|861|betalactams|Class_A_betalactamases|TEM	blaTEM-129_1_AY452662
ARG-ANNOT	Bla|GES-6|AY494718|1-864|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-6:AY494718:1-864:864
CARD	Bla|GES-6|AY494718|1-864|864|betalactams|Class_A_betalactamases|GES	@phgb|AY494718|0-864|ARO:3002335|GES-6 [Klebsiella pneumoniae]
Lahey	Bla|GES-6|AY494718|1-864|864|betalactams|Class_A_betalactamases|GES	AAR97271.1 AY494718.1:1-864
NCBI	Bla|GES-6|AY494718|1-864|864|betalactams|Class_A_betalactamases|GES	gi|695210447|ref|NG_035942.1|1-864
Resfinder	Bla|GES-6|AY494718|1-864|864|betalactams|Class_A_betalactamases|GES	blaGES-6_1_AY494718
ARG-ANNOT	Bla|CTX-M-76|AM982520|5549-6424|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-76:AM982520:5549-6424:876
CARD	Bla|CTX-M-76|AM982520|5549-6424|876|betalactams|Class_A_betalactamases|CTX	@phgb|AM982520|5548-6424|ARO:3001937|CTX-M-76 [Kluyvera ascorbata]
Lahey	Bla|CTX-M-76|AM982520|5549-6424|876|betalactams|Class_A_betalactamases|CTX	CAQ42486.1 AM982520.1:5549-6424
NCBI	Bla|CTX-M-76|AM982520|5549-6424|876|betalactams|Class_A_betalactamases|CTX	gi|193227719|emb|AM982520.1|5549-6424
Resfinder	Bla|CTX-M-76|AM982520|5549-6424|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-76_1_AM982520
ARG-ANNOT	Bla|VIM-19|FJ915116|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-19:FJ915116:1-801:801
CARD	Bla|VIM-19|FJ915116|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|FJ822963|0-801|ARO:3002289|VIM-19 [Escherichia coli]
Lahey	Bla|VIM-19|FJ915116|1-801|801|betalactams|Class_B_betalactamases|VIM	ACY29468.1 FJ822963.1:1-801
NCBI	Bla|VIM-19|FJ915116|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|952947756|gb|KT124310.1|1-801 gi|584308028|gb|KF894700.1|596-1396 gi|695214182|ref|NG_036750.1|516-1316 gi|229560242|gb|FJ915116.1|1-801 gi|825088496|gb|KP975075.1|7975-7820 gi|584292460|gb|KF850517.1|1484-1639 gi|346720643|gb|JF915437.1|900-1055 gi|346720640|gb|JF905459.1|1522-1677 gi|283580179|gb|GU250441.1|953-1108 gi|283580176|gb|GU250440.1|932-1087
Resfinder	Bla|VIM-19|FJ915116|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-19_1_FJ499397
ARG-ANNOT	Bla|OXA-78|AY862132|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-78:AY862132:1-825:825
CARD	Bla|OXA-78|AY862132|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|AY862132|0-825|ARO:3001645|OXA-78 [Acinetobacter baumannii]
Lahey	Bla|OXA-78|AY862132|1-825|825|betalactams|Class_D_betalactamases|OXA	AAW81358.1 AY862132.1:1-825
NCBI	Bla|OXA-78|AY862132|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|58701211|gb|AY862132.1|1-825
Resfinder	Bla|OXA-78|AY862132|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-78_1_AY862132
ARG-ANNOT	Bla|FOX-2|Y10282|19-1167|1149|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-2:Y10282:19-1167:1149
CARD	Bla|FOX-2|Y10282|19-1167|1149|betalactams|Class_C_betalactamases|FOX	@phgb|Y10282|0-1149|ARO:3002156|FOX-2 [Escherichia coli]
Lahey	Bla|FOX-2|Y10282|19-1167|1149|betalactams|Class_C_betalactamases|FOX	CAA71325.1 Y10282.1:19-1167
NCBI	Bla|FOX-2|Y10282|19-1167|1149|betalactams|Class_C_betalactamases|FOX	gi|695198169|ref|NG_034922.1|19-1167
Resfinder	Bla|FOX-2|Y10282|19-1167|1149|betalactams|Class_C_betalactamases|FOX	blaFOX-2_1_Y10282
ARG-ANNOT	1550|KJ510410.1|KJ510410|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-25:EU352796:1-738:738
CARD	1550|KJ510410.1|KJ510410|betalactams|Class_B_betalactamases|IMP	@phgb|KJ510410|5740-6478|ARO:3002236|IMP-45 [Pseudomonas aeruginosa]
Lahey	1550|KJ510410.1|KJ510410|betalactams|Class_B_betalactamases|IMP	AIA58910.1 KJ510410.1:5741-6478
NCBI	1550|KJ510410.1|KJ510410|betalactams|Class_B_betalactamases|IMP	gi|700259586|gb|KM384735.1|1873-2610 gi|641398824|gb|KJ510410.1|5741-6478 gi|194245456|gb|EU588392.2|1873-2610 gi|164520916|gb|EU352796.1|1-738
CARD	CARD|phgb|AF117744|0-780|ARO:3001078|SHV-20|betalactams|Class_A_betalactamases|SHV	@phgb|AF117744|0-780|ARO:3001078|SHV-20 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF117744|0-780|ARO:3001078|SHV-20|betalactams|Class_A_betalactamases|SHV	gi|6979149|gb|AF117744.1|AF117744|1-780
ARG-ANNOT	Bla|VEB-7|FJ825622|1-900|900|betalactams|Class_A_betalactamases|VEB	(Bla)VEB-7:FJ825622:1-900:900
CARD	Bla|VEB-7|FJ825622|1-900|900|betalactams|Class_A_betalactamases|VEB	@phgb|FJ825622|0-900|ARO:3002376|VEB-7 [Acinetobacter baumannii]
Lahey	Bla|VEB-7|FJ825622|1-900|900|betalactams|Class_A_betalactamases|VEB	ACO56763.1 FJ825622.1:1-900
NCBI	Bla|VEB-7|FJ825622|1-900|900|betalactams|Class_A_betalactamases|VEB	gi|226439458|gb|FJ825622.1|1-900
Resfinder	Bla|VEB-7|FJ825622|1-900|900|betalactams|Class_A_betalactamases|VEB	blaVEB-7_1_FJ825622
CARD	Bla|TEM-207_1_KC818234|betalactams|Class_A_betalactamases|TEM	@phgb|KC818234|0-861|ARO:3001384|TEM-207 [Escherichia coli]
Lahey	Bla|TEM-207_1_KC818234|betalactams|Class_A_betalactamases|TEM	AGK40892.1 KC818234.1:1-861
NCBI	Bla|TEM-207_1_KC818234|betalactams|Class_A_betalactamases|TEM	gi|482869242|gb|KC818234.1|1-861 gi|12018136|gb|AF308742.1|1-861
Resfinder	Bla|TEM-207_1_KC818234|betalactams|Class_A_betalactamases|TEM	blaTEM-207_1_KC818234
CARD	Bla|NC_010611.6236097|betalactams|Class_D_betalactamases|OXA	@phgb|NC_010611|251961-252762|ARO:3001415|OXA-20 [Acinetobacter baumannii ACICU]
NCBI	Bla|NC_010611.6236097|betalactams|Class_D_betalactamases|OXA	gi|806639053|gb|KM972600.1|2323-3123 gi|183207914|gb|CP000863.1|251962-252762 gi|32172495|gb|AY307114.1|1243-2043 gi|21668215|emb|AJ319747.1|1294-2094 gi|209981013|gb|EU503121.1|7854-8164
CARD	CARD|pvgb|AF469609|566-3353|ARO:3003297|Bartonella|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	@pvgb|AF469609|566-3353|ARO:3003297|Bartonella bacilliformis gyrA conferring resistance to fluoroquinolones [Bartonella bacilliformis]
NCBI	CARD|pvgb|AF469609|566-3353|ARO:3003297|Bartonella|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|120613812|gb|CP000524.1|744012-746799 gi|18920718|gb|AF469609.1|567-3354
NCBI	Sul|sul2_12_AF497970|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|20386405|gb|AF497970.1|5780-6595 gi|12054883|emb|AJ249249.1|1614-2429 gi|695208244|ref|NG_035503.1|449-1264
Resfinder	Sul|sul2_12_AF497970|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_12_AF497970
CARD	Mdr|AB015853.1|gene2|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXY	@phgb|AB015853|1330-4471|ARO:3003033|mexY [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|AB015853.1|gene2|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXY	gi|3868982|dbj|AB015853.1|1331-4471
NCBI	Rif|NC_002163.1.904806|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|756103065|gb|CP010301.1|443371-447507 gi|756089737|gb|CP010072.1|481121-485257 gi|589078008|gb|CP006689.1|438989-443125 gi|589076343|gb|CP006688.1|438987-443123 gi|589074677|gb|CP006687.1|438987-443123 gi|589073010|gb|CP006686.1|438987-443123 gi|589071344|gb|CP006685.1|438987-443123 gi|401780468|emb|HE978252.1|438992-443128 gi|30407139|emb|AL111168.1|438992-443128 gi|459377228|gb|KC408834.1|1-4128
CARD	CARD|phgb|NC_002516.2|3982020-3984009|ARO:3002985|arnA|Cationic_antimicrobial_peptides|Lipid_A_modification|ARNA	@phgb|NC_002516.2|3982020-3984009|ARO:3002985|arnA [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516.2|3982020-3984009|ARO:3002985|arnA|Cationic_antimicrobial_peptides|Lipid_A_modification|ARNA	gi|974267876|gb|CP008859.1|5564159-5566147 gi|926451317|emb|LN871187.1|1533816-1531828 gi|553895034|gb|CP006832.1|3982016-3984004 gi|553886202|gb|CP006831.1|3982016-3984004 gi|543879514|gb|CP006705.1|3761604-3763592 gi|347302377|gb|CP002496.1|1570355-1568367 gi|110227054|gb|AE004091.2|3982021-3984009
ARG-ANNOT	Bla|OXA|FJ872530|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-144:FJ872530:1-825:825
CARD	Bla|OXA|FJ872530|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|FJ872530|0-825|ARO:3002480|OXA-144 [Acinetobacter baumannii]
Lahey	Bla|OXA|FJ872530|1-825|825|betalactams|Class_D_betalactamases|OXA	ACY56711.1 FJ872530.1:1-825
NCBI	Bla|OXA|FJ872530|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|262358181|gb|FJ872530.1|1-825
Resfinder	Bla|OXA|FJ872530|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-144_2_FJ872530
NCBI	gi|591542941|gb|KJ207208.1|betalactams|Class_C_betalactamases|ACT	gi|591542941|gb|KJ207208.1|438-1684
ARG-ANNOT	Bla|OXA-19|FJ906752|1219-2019|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-19:FJ906752:1219-2019:801
CARD	Bla|OXA-19|FJ906752|1219-2019|801|betalactams|Class_D_betalactamases|OXA	@phgb|AF043381|943-1744|ARO:3001414|OXA-19 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-19|FJ906752|1219-2019|801|betalactams|Class_D_betalactamases|OXA	AAD02245.1 AF043381.1:944-1744
NCBI	Bla|OXA-19|FJ906752|1219-2019|801|betalactams|Class_D_betalactamases|OXA	gi|229560236|gb|FJ906752.1|1236-2036 gi|4105085|gb|AF043381.1|AF043381|944-1744
Resfinder	Bla|OXA-19|FJ906752|1219-2019|801|betalactams|Class_D_betalactamases|OXA	blaOXA-19_1_AF043381
NCBI	Fos|fosA_1_NZ_ACWU01000146|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|961421427|gb|CP013144.1|143329-143736
CARD	CARD|pvgb|AL123456|4246513-4249810|ARO:3003326|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBB|RequiresSNPConfirmation	@pvgb|AL123456|4246513-4249810|ARO:3003326|Mycobacterium tuberculosis embB mutations conferring resistance to ethambutol [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|4246513-4249810|ARO:3003326|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBB|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|4260186-4263483 gi|984989958|gb|CP010339.1|4234422-4237719 gi|984981517|gb|CP010337.1|4236761-4240058 gi|984950177|gb|CP010330.1|4256889-4260186 gi|984945858|gb|CP010329.1|4263618-4266915 gi|755917060|gb|CP007299.1|4246842-4250139 gi|749193065|gb|CP007027.1|4245894-4249191 gi|737516150|dbj|AP014573.1|4250111-4253408 gi|702068662|emb|HG813240.1|4247268-4250565 gi|690310687|gb|CP009480.1|4238923-4242220
CARD	CARD|phgb|U97042|1263-4347|ARO:3003010|ceoB|Multi-drug_resistance|Multi-drug_efflux_pumps|CEOB	@phgb|U97042|1263-4347|ARO:3003010|ceoB [Burkholderia cepacia]
NCBI	CARD|phgb|U97042|1263-4347|ARO:3003010|ceoB|Multi-drug_resistance|Multi-drug_efflux_pumps|CEOB	gi|2109269|gb|U97042.1|BCU97042|1264-4348
Lahey	Bla|OXA-50_2_AY306133|betalactams|Class_D_betalactamases|OXA	AAQ76280.1 AY306133.1:1-789
NCBI	Bla|OXA-50_2_AY306133|betalactams|Class_D_betalactamases|OXA	gi|974255378|gb|CP008857.1|4611037-4611825 gi|815968487|gb|CP011317.1|7411212-7412000 gi|751373101|gb|CP010555.1|3674320-3675108 gi|34591783|gb|AY306133.1|1-789
Resfinder	Bla|OXA-50_2_AY306133|betalactams|Class_D_betalactamases|OXA	blaOXA-50_2_AY306133
NCBI	Tet|tetC_9_AY046276|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	gi|295311792|gb|GU987054.1|833-2008 gi|190887131|gb|EU751613.1|1-1176 gi|17342620|gb|AY046276.1|42760-43935 gi|961454902|gb|KT991388.1|1293-134 gi|961454902|gb|KT991388.1|6978-7007 gi|954665409|gb|KT072898.1|4416-5575 gi|933685907|gb|KR827392.1|16075-14916 gi|825088250|gb|KP975074.1|124202-125361 gi|823682865|emb|LN831184.1|226875-228034 gi|808740283|gb|CP011301.1|4026739-4025580 gi|764145230|gb|KM604642.1|2836-3995
Resfinder	Tet|tetC_9_AY046276|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	tet(C)_9_AY046276
NCBI	gi|13591818|gb|AF357599.1|betalactams|Class_C_betalactamases|CMY	gi|695214120|ref|NG_036738.1|6314-7791 gi|13591818|gb|AF357599.1|1-1478 gi|573013567|dbj|AP013064.1|27532-27602 gi|573013567|dbj|AP013064.1|29787-29857 gi|573013567|dbj|AP013064.1|29906-29976 gi|146150962|gb|EF382672.1|102448-102518 gi|695199441|ref|NG_035225.1|428-498 gi|695200064|ref|NG_035368.1|48-118
NCBI	gi|407731530|gb|JX440354.1|betalactams|Class_C_betalactamases|ACT	gi|407731530|gb|JX440354.1|655-1902
CARD	CARD|phgb|AF427128|208-1069|ARO:3000949|TEM-82|betalactams|Class_A_betalactamases|TEM	@phgb|AF427128|208-1069|ARO:3000949|TEM-82 [Escherichia coli]
NCBI	CARD|phgb|AF427128|208-1069|ARO:3000949|TEM-82|betalactams|Class_A_betalactamases|TEM	gi|16798371|gb|AF427128.1|AF427128|209-1070
NCBI	MLS|vatE_7_AY043211|MLS|Streptogramin_A_O-acetyltransferase|VATE	gi|15266479|gb|AY043211.1|1-645
Resfinder	MLS|vatE_7_AY043211|MLS|Streptogramin_A_O-acetyltransferase|VATE	vat(E)_7_AY043211
ARG-ANNOT	986|AM237806.1|AM237806|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA29:AM237806:615-1086:472
NCBI	986|AM237806.1|AM237806|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|221360474|emb|FM957878.1|31-502 gi|90954784|emb|AM237806.1|615-1086
Resfinder	986|AM237806.1|AM237806|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA29_1_AM237806
CARD	CARD|phgb|GU371926|50304-51165|ARO:3000903|TEM-33|betalactams|Class_A_betalactamases|TEM	@phgb|GU371926|50304-51165|ARO:3000903|TEM-33 [Escherichia coli]
NCBI	CARD|phgb|GU371926|50304-51165|ARO:3000903|TEM-33|betalactams|Class_A_betalactamases|TEM	gi|302310020|gb|GU371926.1|50305-51166
CARD	Flq|QnrB65_1_KC580654|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC580654|0-645|ARO:3002777|QnrB65 [Citrobacter freundii]
NCBI	Flq|QnrB65_1_KC580654|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|496297319|gb|KC580654.1|1-645
Resfinder	Flq|QnrB65_1_KC580654|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB65_1_KC580654
ARG-ANNOT	Bla|cfiA10|AB087227|1-750|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA10:AB087227:1-750:750
NCBI	Bla|cfiA10|AB087227|1-750|750|betalactams|Class_B_betalactamases|CFIA	gi|22091059|dbj|AB087227.1|1-750
Resfinder	Bla|cfiA10|AB087227|1-750|750|betalactams|Class_B_betalactamases|CFIA	cfiA10_1_AB087227
CARD	AGly|strB_3_AF024602|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	@phgb|AF024602|3155-3992|ARO:3002660|APH(6)-Id [Pseudomonas aeruginosa]
NCBI	AGly|strB_3_AF024602|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|3220157|gb|AF024602.1|AF024602|3156-3992
Resfinder	AGly|strB_3_AF024602|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	strB_3_AF024602
ARG-ANNOT	Bla|OXA-201|HQ734812|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-201:HQ734812:1-825:825
CARD	Bla|OXA-201|HQ734812|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HQ734812|0-825|ARO:3001666|OXA-201 [Acinetobacter baumannii]
Lahey	Bla|OXA-201|HQ734812|1-825|825|betalactams|Class_D_betalactamases|OXA	ADX07746.1 HQ734812.1:1-825
NCBI	Bla|OXA-201|HQ734812|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|322719695|gb|HQ734812.1|1-825
Resfinder	Bla|OXA-201|HQ734812|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-201_1_HQ734812
ARG-ANNOT	Bla|IMP-34|AB715422|1696-2436|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-34:AB715422:1696-2436:741
CARD	Bla|IMP-34|AB715422|1696-2436|741|betalactams|Class_B_betalactamases|IMP	@phgb|AB715422|1695-2436|ARO:3002225|IMP-34 [Klebsiella oxytoca]
Lahey	Bla|IMP-34|AB715422|1696-2436|741|betalactams|Class_B_betalactamases|IMP	BAM37538.1 AB700341.1:1-741
NCBI	Bla|IMP-34|AB715422|1696-2436|741|betalactams|Class_B_betalactamases|IMP	gi|787518906|gb|KM877517.1|10532-11272 gi|697287983|dbj|AB715422.2|27226-27966 gi|685837395|dbj|AP014646.1|2522310-2521570 gi|685837395|dbj|AP014646.1|4468199-4467459 gi|670351331|dbj|AP014622.1|1450635-1449895 gi|670351331|dbj|AP014622.1|3807301-3806561 gi|695214805|ref|NG_036904.1|1696-2436 gi|402534425|dbj|AB700341.1|1-741
Resfinder	Bla|IMP-34|AB715422|1696-2436|741|betalactams|Class_B_betalactamases|IMP	blaIMP-34_1_AB715422
ARG-ANNOT	Bla|LEN-19|AM850909|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-19:AM850909:1-861:861
CARD	Bla|LEN-19|AM850909|1-861|861|betalactams|Class_A_betalactamases|LEN	@phgb|AM850909|0-861|ARO:3002466|LEN-19 [Klebsiella pneumoniae]
NCBI	Bla|LEN-19|AM850909|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|197724690|emb|AM850909.2|1-861
Resfinder	Bla|LEN-19|AM850909|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN19_1_AM850909
NCBI	1055|AY139601.1|AY139601|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|24209732|gb|AY139601.1|555-1187
ARG-ANNOT	Bla|LEN-22|AM850912|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-22:AM850912:1-861:861
CARD	Bla|LEN-22|AM850912|1-861|861|betalactams|Class_A_betalactamases|LEN	@phgb|AM850912|0-861|ARO:3002469|LEN-22 [Klebsiella pneumoniae]
NCBI	Bla|LEN-22|AM850912|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|197724696|emb|AM850912.2|1-861
Resfinder	Bla|LEN-22|AM850912|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN22_1_AM850912
Resfinder	Bla|OXA-182_1_HM640278|betalactams|Class_D_betalactamases|OXA	blaOXA-182_1_HM640278
ARG-ANNOT	978|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANYA	(Gly)VanY-Pt2:DQ018711:6234-7133:900
NCBI	978|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANYA	gi|66731642|gb|DQ018711.1|6234-7133
Resfinder	978|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANYA	VanY-Pt_5_DQ018711
NCBI	gi|562889820|gb|KF585144.1|betalactams|Class_A_betalactamases|SHV	gi|562889820|gb|KF585144.1|48-967
ARG-ANNOT	CARD|phgb|AB083212|0-756|ARO:3000859|rmtA|Aminoglycosides|16S_rRNA_methyltransferases|RMTA	(AGly)RmtA:AB120321:6677-7432:756
CARD	CARD|phgb|AB083212|0-756|ARO:3000859|rmtA|Aminoglycosides|16S_rRNA_methyltransferases|RMTA	@phgb|AB083212|0-756|ARO:3000859|rmtA [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AB083212|0-756|ARO:3000859|rmtA|Aminoglycosides|16S_rRNA_methyltransferases|RMTA	gi|45476395|dbj|AB120321.1|6677-7432 gi|42794063|dbj|AB083212.2|5482-6237
Resfinder	CARD|phgb|AB083212|0-756|ARO:3000859|rmtA|Aminoglycosides|16S_rRNA_methyltransferases|RMTA	rmtA_1_AB120321
ARG-ANNOT	Bla|OXA-67|DQ491200|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-67:DQ491200:1-825:825
CARD	Bla|OXA-67|DQ491200|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|DQ491200|0-825|ARO:3001437|OXA-67 [Acinetobacter baumannii]
Lahey	Bla|OXA-67|DQ491200|1-825|825|betalactams|Class_D_betalactamases|OXA	ABF50983.1 DQ491200.1:1-825
NCBI	Bla|OXA-67|DQ491200|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|95070668|gb|DQ491200.1|1-825
Resfinder	Bla|OXA-67|DQ491200|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-67_1_DQ491200
CARD	CARD|phgb|AP009048|2165012-2166416|ARO:3000829|baeS|Multi-drug_resistance|MDR_regulator|BAES	@phgb|AP009048|2165012-2166416|ARO:3000829|baeS [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|AP009048|2165012-2166416|ARO:3000829|baeS|Multi-drug_resistance|MDR_regulator|BAES	gi|985000614|gb|CP014225.1|360075-361479 gi|984297099|gb|CP014197.1|1597665-1596261 gi|958627747|gb|CP013253.1|1253396-1251992 gi|958612453|gb|CP013048.1|2094685-2093281 gi|939732440|gb|CP011343.2|2143033-2144437 gi|939731527|gb|CP011342.2|2143729-2145133 gi|937526251|gb|CP012870.1|2478778-2477374 gi|937521852|gb|CP012869.1|2478778-2477374 gi|937517453|gb|CP012868.1|2478778-2477374 gi|932857508|emb|LN877770.1|2526910-2528314
ARG-ANNOT	Bla|OKP-B-5|AY512506|68-928|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-5:AY512506:68-928:861
NCBI	Bla|OKP-B-5|AY512506|68-928|861|betalactams|Class_A_betalactamases|OKP	gi|42398295|gb|AY512506.1|68-928
Resfinder	Bla|OKP-B-5|AY512506|68-928|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-5_1_AY512506
ARG-ANNOT	Bla|OXA-170|HM488991|1-822|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-170:HM488991:1-822:822
CARD	Bla|OXA-170|HM488991|1-822|822|betalactams|Class_D_betalactamases|OXA	@phgb|HM488991|0-822|ARO:3001470|OXA-170 [Acinetobacter baumannii]
Lahey	Bla|OXA-170|HM488991|1-822|822|betalactams|Class_D_betalactamases|OXA	ADK35874.1 HM488991.1:1-822
NCBI	Bla|OXA-170|HM488991|1-822|822|betalactams|Class_D_betalactamases|OXA	gi|300825679|gb|HM488991.1|1-822
Resfinder	Bla|OXA-170|HM488991|1-822|822|betalactams|Class_D_betalactamases|OXA	blaOXA-170_1_HM488991
NCBI	582|AY655721.2|AY655721|Glycopeptides|VanB-type_regulator|VANSB	gi|941949718|gb|CP013009.1|131299-129956 gi|577698893|gb|KF823968.1|976-2319 gi|378937014|gb|CP003351.1|2844531-2843188 gi|229463101|gb|FJ767776.1|976-2319 gi|80973263|gb|AY655721.2|731-2074 gi|80973252|gb|AY655720.2|731-2074 gi|80973242|gb|AY655718.2|731-2074 gi|11878534|gb|AF310956.2|AF310956|1133-2476 gi|33336058|gb|AF550668.1|2242-3579
NCBI	MLS|ermT_2_AY894138|MLS|23S_rRNA_methyltransferases|ERMT	gi|968578997|gb|CP013689.1|1399687-1400421 gi|961575529|gb|CP013627.1|3256-3990 gi|760459632|gb|KM576795.1|1-735 gi|663089991|gb|KJ778678.1|1981-1247 gi|695224142|ref|NG_041022.1|12078-11344 gi|695224112|ref|NG_041020.1|10006-9272 gi|448100274|gb|EU192194.2|15-749 gi|344221780|gb|JF308631.1|126-860 gi|344221775|gb|JF308630.1|126-860 gi|344221769|gb|JF308629.1|126-860
Resfinder	MLS|ermT_2_AY894138|MLS|23S_rRNA_methyltransferases|ERMT	erm(T)_2_AY894138
ARG-ANNOT	gi|125634073|gb|EF374097.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-56:EF374097:1-876:876
CARD	gi|125634073|gb|EF374097.1|betalactams|Class_A_betalactamases|CTX	@phgb|EF374097|0-876|ARO:3001918|CTX-M-56 [Escherichia coli]
Lahey	gi|125634073|gb|EF374097.1|betalactams|Class_A_betalactamases|CTX	ABN48311.1 EF374097.1:1-876
NCBI	gi|125634073|gb|EF374097.1|betalactams|Class_A_betalactamases|CTX	gi|125634073|gb|EF374097.1|1-876
Resfinder	gi|125634073|gb|EF374097.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-56_1_EF374097
NCBI	gi|388564855|gb|JQ733578.1|betalactams|Class_C_betalactamases|CMY	gi|388564855|gb|JQ733578.1|1008-2235
ARG-ANNOT	195|U09991.1|SVU09991|Phenicol|Phenicol_efflux_pumps|ARAJ	(Phe)CmlV:U09991:28-1338:1311
CARD	195|U09991.1|SVU09991|Phenicol|Phenicol_efflux_pumps|ARAJ	@phgb|U09991|27-1338|ARO:3002700|cmlv [Streptomyces venezuelae ATCC 10712]
NCBI	195|U09991.1|SVU09991|Phenicol|Phenicol_efflux_pumps|ARAJ	gi|498886|gb|U09991.1|SVU09991|28-1338
Resfinder	195|U09991.1|SVU09991|Phenicol|Phenicol_efflux_pumps|ARAJ	cmlV_1_U09991
NCBI	Fos|fosA_3_NZ_ACWO01000079|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|719628246|gb|CP009461.1|4216626-4216215
Resfinder	Fos|fosA_3_NZ_ACWO01000079|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_3_NZ_ACWO01000079
NCBI	Bla|X78117.1|gene1|betalactams|Class_C_betalactamases|CMY	gi|496632|emb|X78117.1|58-1287
CARD	Bla|FJ666068.1|gene1|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666068|0-1194|ARO:3002502|PDC-5 [Pseudomonas aeruginosa]
Lahey	Bla|FJ666068.1|gene1|betalactams|Class_C_betalactamases|PDC	ACQ82810.1 FJ666068.1:1-1194
NCBI	Bla|FJ666068.1|gene1|betalactams|Class_C_betalactamases|PDC	gi|229597525|gb|FJ666068.1|1-1194
CARD	gi|2570064|emb|Y15130.1|betalactams|Class_C_betalactamases|CMY	@phgb|Y15130|0-1143|ARO:3002015|CMY-4 [Proteus mirabilis]
Lahey	gi|2570064|emb|Y15130.1|betalactams|Class_C_betalactamases|CMY	CAA75402.1 Y15130.1:1-1143
NCBI	gi|2570064|emb|Y15130.1|betalactams|Class_C_betalactamases|CMY	gi|2570064|emb|Y15130.1|1-1143
CARD	CARD|phgb|JN790862|244-1120|ARO:3001980|CTX-M-121|betalactams|Class_A_betalactamases|CTX	@phgb|JN790862|244-1120|ARO:3001980|CTX-M-121 [Escherichia coli]
NCBI	CARD|phgb|JN790862|244-1120|ARO:3001980|CTX-M-121|betalactams|Class_A_betalactamases|CTX	gi|512134473|gb|KF021999.1|23-899 gi|375313992|gb|JN790862.1|245-1121
ARG-ANNOT	Bla|TEM-158|EF534736|214-1074|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-158:EF534736:214-1074:861
CARD	Bla|TEM-158|EF534736|214-1074|861|betalactams|Class_A_betalactamases|TEM	@phgb|EF534736|213-1074|ARO:3001024|TEM-158 [Escherichia coli]
Lahey	Bla|TEM-158|EF534736|214-1074|861|betalactams|Class_A_betalactamases|TEM	ABQ00181.1 EF534736.1:214-1074
NCBI	Bla|TEM-158|EF534736|214-1074|861|betalactams|Class_A_betalactamases|TEM	gi|145975406|gb|EF534736.1|214-1074
Resfinder	Bla|TEM-158|EF534736|214-1074|861|betalactams|Class_A_betalactamases|TEM	blaTEM-158_1_EF534736
CARD	Flq|Qnr850_1_JX440357|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JX440357|135-780|ARO:3002765|QnrB50 [Citrobacter freundii]
NCBI	Flq|Qnr850_1_JX440357|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|407731542|gb|JX440357.1|136-780
Resfinder	Flq|Qnr850_1_JX440357|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB50_1_JX440357
ARG-ANNOT	Bla|CTX-M-45|D89862|112-981|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-45:D89862:112-981:876
CARD	Bla|CTX-M-45|D89862|112-981|876|betalactams|Class_A_betalactamases|CTX	@phgb|D89862|111-981|ARO:3001907|CTX-M-45 [Escherichia coli]
NCBI	Bla|CTX-M-45|D89862|112-981|876|betalactams|Class_A_betalactamases|CTX	gi|695198421|ref|NG_034975.1|112-981
Resfinder	Bla|CTX-M-45|D89862|112-981|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-45_1_D89862
NCBI	Tet|ortB_2_AF061335|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|OTRB	gi|3617953|gb|AF079900.1|AF079900|121-1731 gi|3108176|gb|AF061335.1|AF061335|1-1611
Resfinder	Tet|ortB_2_AF061335|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|OTRB	ort(B)_2_AF061335
ARG-ANNOT	Bla|Nps1|AY027589|46-828|783|betalactams|Class_A_betalactamases|NPS	(Bla)Nps1:AY027589:46-828:783
Lahey	Bla|Nps1|AY027589|46-828|783|betalactams|Class_A_betalactamases|NPS	AAK14791.1 AY027589.1:46-828
NCBI	Bla|Nps1|AY027589|46-828|783|betalactams|Class_A_betalactamases|NPS	gi|695200246|ref|NG_035412.1|46-828
Resfinder	Bla|Nps1|AY027589|46-828|783|betalactams|Class_A_betalactamases|NPS	blaNPS_1_AY027589
ARG-ANNOT	Gly|VanH-Ao2|HQ679900|1-1032|1032|Glycopeptides|VanA-type_resistance_protein|VANHA	(Gly)VanH-Ao2:HQ679900:1-1032:1032
NCBI	Gly|VanH-Ao2|HQ679900|1-1032|1032|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|505812666|gb|CP003410.1|1533118-1534149 gi|336445587|gb|HQ679900.1|1-1032
Resfinder	Gly|VanH-Ao2|HQ679900|1-1032|1032|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-Ao2_9_HQ679900
ARG-ANNOT	Bla|OXA-96|DQ519090|63-905|843|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-96:DQ519090:63-905:843
CARD	Bla|OXA-96|DQ519090|63-905|843|betalactams|Class_D_betalactamases|OXA	@phgb|DQ519090|62-905|ARO:3001631|OXA-96 [Acinetobacter baumannii]
Lahey	Bla|OXA-96|DQ519090|63-905|843|betalactams|Class_D_betalactamases|OXA	ABF47919.1 DQ519090.1:63-905
NCBI	Bla|OXA-96|DQ519090|63-905|843|betalactams|Class_D_betalactamases|OXA	gi|94960154|gb|DQ519090.1|63-905
Resfinder	Bla|OXA-96|DQ519090|63-905|843|betalactams|Class_D_betalactamases|OXA	blaOXA-96_1_DQ519090
CARD	Bla|CTX-M-13_2_AF252623|betalactams|Class_A_betalactamases|CTX	@phgb|AF252623|0-876|ARO:3001876|CTX-M-13 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-13_2_AF252623|betalactams|Class_A_betalactamases|CTX	AAF72531.1 AF252623.2:1-876
NCBI	Bla|CTX-M-13_2_AF252623|betalactams|Class_A_betalactamases|CTX	gi|695200145|ref|NG_035388.1|1-876
Resfinder	Bla|CTX-M-13_2_AF252623|betalactams|Class_A_betalactamases|CTX	blaCTX-M-13_2_AF252623
ARG-ANNOT	Bla|CTX-M-93|HQ166709|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-93:HQ166709:1-876:876
CARD	Bla|CTX-M-93|HQ166709|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|HQ166709|0-876|ARO:3001953|CTX-M-93 [Escherichia coli]
Lahey	Bla|CTX-M-93|HQ166709|1-876|876|betalactams|Class_A_betalactamases|CTX	ADN26580.1 HQ166709.1:1-876
NCBI	Bla|CTX-M-93|HQ166709|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|695224876|ref|NG_041177.1|1-876
Resfinder	Bla|CTX-M-93|HQ166709|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-93_1_HQ166709
CARD	1330|AF099139.1|AF099139|betalactams|Class_B_betalactamases|IND	@phgb|AF099139|505-1225|ARO:3002256|IND-1 [Chryseobacterium indologenes]
Lahey	1330|AF099139.1|AF099139|betalactams|Class_B_betalactamases|IND	AAD20273.1 AF099139.1:506-1225
NCBI	1330|AF099139.1|AF099139|betalactams|Class_B_betalactamases|IND	gi|4416229|gb|AF099139.1|AF099139|506-1225
Resfinder	1330|AF099139.1|AF099139|betalactams|Class_B_betalactamases|IND	blaIND-1_1_AF099139
ARG-ANNOT	Bla|CMY-1|X92508|1-1149|1149|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-1:X92508:1-1149:1149
CARD	Bla|CMY-1|X92508|1-1149|1149|betalactams|Class_C_betalactamases|CMY	@phgb|X92508|332-1481|ARO:3002012|CMY-1 [Klebsiella pneumoniae]
Lahey	Bla|CMY-1|X92508|1-1149|1149|betalactams|Class_C_betalactamases|CMY	CAA63264.1 X92508.1:333-1481
NCBI	Bla|CMY-1|X92508|1-1149|1149|betalactams|Class_C_betalactamases|CMY	gi|695197690|ref|NG_034779.1|333-1481
Resfinder	Bla|CMY-1|X92508|1-1149|1149|betalactams|Class_C_betalactamases|CMY	blaCMY-1_1_X92508
CARD	CARD|phgb|EF504260|1994-3155|ARO:3001818|ACC-4|betalactams|Class_C_betalactamases|ACC	@phgb|EF504260|1994-3155|ARO:3001818|ACC-4 [Escherichia coli]
NCBI	CARD|phgb|EF504260|1994-3155|ARO:3001818|ACC-4|betalactams|Class_C_betalactamases|ACC	gi|698174153|gb|KM087831.1|1173-12 gi|284433120|gb|GU256641.1|84123-82962 gi|695216823|ref|NG_037702.1|1995-3156
NCBI	gi|164449661|gb|EU342351.1|betalactams|Class_A_betalactamases|SHV	gi|815976342|gb|CP011313.1|2734371-2735303 gi|164449661|gb|EU342351.1|173-1105
NCBI	MLS|ermC_13_M13761|MLS|23S_rRNA_methyltransferases|ERMC	gi|961570267|gb|CP013617.1|2092-1358 gi|929861441|gb|CP010404.1|1680-2414 gi|757805033|dbj|AB982226.1|1683-2417 gi|757805030|dbj|AB982225.1|1392-2126 gi|700659238|gb|KF831357.1|2152-1418 gi|658131571|emb|HG380317.1|136-870 gi|537392238|gb|CP003981.1|84-818 gi|695224142|ref|NG_041022.1|5598-4864 gi|452753789|emb|HF569094.1|40393-39659 gi|407031691|gb|JX644443.1|2087-1353
Resfinder	MLS|ermC_13_M13761|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_13_M13761
NCBI	ACou|NC_002745.1124025|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|927048389|gb|CP010890.1|1360545-1362542 gi|803444476|gb|CP011147.1|1340104-1342101 gi|595636499|gb|CP007454.1|2536268-2534271 gi|408436493|emb|HE579073.1|1332627-1334624 gi|408434508|emb|HE579071.1|1332578-1334575 gi|408432519|emb|HE579069.1|1332804-1334801 gi|408430526|emb|HE579067.1|1332763-1334760 gi|408428537|emb|HE579065.1|1332765-1334762 gi|408426549|emb|HE579063.1|1332769-1334766 gi|408424560|emb|HE579061.1|1332814-1334811
CARD	Flq|QnrB32_2_JN173054|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN173054|36-681|ARO:3002747|QnrB32 [Citrobacter freundii]
NCBI	Flq|QnrB32_2_JN173054|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|341873886|gb|JN173054.1|37-681
Resfinder	Flq|QnrB32_2_JN173054|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB32_2_JN173054
CARD	Mdr|NC_002516.2.877851|Multi-drug_resistance|Multi-drug_efflux_pumps|OPRM	@phgb|NC_002516|476332-477790|ARO:3000379|oprM [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.877851|Multi-drug_resistance|Multi-drug_efflux_pumps|OPRM	gi|974341323|gb|CP008868.1|2133752-2135209 gi|974341323|gb|CP008868.1|4584978-4584951 gi|974275390|gb|CP008860.1|1709607-1711064 gi|974275390|gb|CP008860.1|4162120-4162093 gi|974261848|gb|CP008858.1|4858445-4856988 gi|974261848|gb|CP008858.1|2355564-2355591 gi|970332569|gb|CP013696.1|1982741-1984198 gi|970332569|gb|CP013696.1|4526000-4525973 gi|926451317|emb|LN871187.1|476337-477794 gi|926451317|emb|LN871187.1|2869172-2869145 gi|745838743|gb|CP007399.1|3021094-3022551 gi|660504631|gb|CP008749.1|476333-477790 gi|660504631|gb|CP008749.1|2646664-2646691 gi|553895034|gb|CP006832.1|476333-477790 gi|553895034|gb|CP006832.1|2646659-2646686 gi|553886202|gb|CP006831.1|476333-477790 gi|553886202|gb|CP006831.1|2646659-2646686 gi|543879514|gb|CP006705.1|476209-477666
ARG-ANNOT	Bla|OKP-B-9|AM051159|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-9:AM051159:1-861:861
CARD	Bla|OKP-B-9|AM051159|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051159|0-861|ARO:3002442|OKP-B-9 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-9|AM051159|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655097|emb|AM051159.1|1-861
Resfinder	Bla|OKP-B-9|AM051159|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-9_1_AM051159
NCBI	MLS|mphC_1_AB013298|MLS|Macrolide_phosphotransferases|MPHC	gi|57207863|dbj|AB092817.1|7446-8345 gi|57157628|dbj|AB179623.1|21594-20695 gi|3892641|dbj|AB013298.1|2296-3195
Resfinder	MLS|mphC_1_AB013298|MLS|Macrolide_phosphotransferases|MPHC	mph(C)_1_AB013298
NCBI	gi|300510841|gb|HM245380.1|betalactams|Class_B_betalactamases|IND	gi|300510841|gb|HM245380.1|1-823
NCBI	gi|74422854|gb|DQ174306.1|betalactams|Class_A_betalactamases|SHV	gi|74422854|gb|DQ174306.1|1-865
NCBI	1161|FR748153.1|FR748153|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|975048878|gb|CP013962.1|862023-861550 gi|944374642|gb|KT692980.1|113-586 gi|944398239|gb|CP013025.1|2322871-2323344 gi|941350200|gb|KT345946.1|27295-27768 gi|939537623|gb|KR610435.1|69-542 gi|925216761|gb|KR028103.1|76-549 gi|768032417|gb|KM975296.1|2091-2564 gi|768032383|gb|KM975295.1|2091-2564 gi|768032333|gb|KM514484.1|2091-2564 gi|762036447|gb|CP010373.2|119258-118785
Resfinder	1161|FR748153.1|FR748153|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA1_30_JQ690541
ARG-ANNOT	611|Y18050.2|Y18050|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)AphA15:Y18050:4758-5552:795
NCBI	611|Y18050.2|Y18050|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|730042884|gb|KJ571202.1|5179-5973 gi|827747829|gb|AF288045.3|3425-4219 gi|825088700|gb|KP975077.1|105806-105012 gi|742797756|emb|LK054503.1|13865-14659 gi|635661965|gb|KJ547703.1|1623-2417 gi|619321204|gb|KF977034.1|32101-32895 gi|578357653|gb|KF856617.1|2136-2930 gi|533733485|emb|HF679279.1|8250-9044 gi|478437743|gb|KC469285.1|1969-2763 gi|401891056|gb|JX185132.1|2591-3385
Resfinder	611|Y18050.2|Y18050|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-XV_1_Y18050
ARG-ANNOT	906|AJ628983.2|AJ628983|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac:AJ628983:1985-2539:555
NCBI	906|AJ628983.2|AJ628983|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|51571647|emb|AJ628983.2|1985-2539
Resfinder	906|AJ628983.2|AJ628983|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac_1_AJ628983
ARG-ANNOT	Bla|OXA-45|AM849110|2553-3347|795|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-45:AM849110:2553-3347:795
NCBI	Bla|OXA-45|AM849110|2553-3347|795|betalactams|Class_D_betalactamases|OXA	gi|164511891|emb|AM849110.1|2553-3347
ARG-ANNOT	Bla|TLA-1|GU441460|3220-4125|906|betalactams|Class_A_betalactamases|TLA	(Bla)TLA-1:GU441460:3220-4125:906
NCBI	Bla|TLA-1|GU441460|3220-4125|906|betalactams|Class_A_betalactamases|TLA	gi|695223747|ref|NG_040885.1|3220-4125 gi|695199154|ref|NG_035175.1|253-1158
ARG-ANNOT	AGly|AadA21|AY171244|47-838|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA21:AY171244:47-838:792
CARD	AGly|AadA21|AY171244|47-838|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AY171244|46-838|ARO:3002618|aadA21 [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	AGly|AadA21|AY171244|47-838|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|27368134|gb|AY171244.1|47-838
Resfinder	AGly|AadA21|AY171244|47-838|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA21_1_AY171244
NCBI	Bla|EU086830.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|300687338|gb|CP002025.1|1473162-1472300 gi|158634575|gb|EU086830.1|36-898
ARG-ANNOT	gi|28625510|gb|AY227752.1|betalactams|Class_C_betalactamases|MIR	(Bla)MIR-2:AY227752:89-1234:1146
CARD	gi|28625510|gb|AY227752.1|betalactams|Class_C_betalactamases|MIR	@phgb|AY227752|88-1234|ARO:3002168|MIR-2 [Enterobacter cloacae]
Lahey	gi|28625510|gb|AY227752.1|betalactams|Class_C_betalactamases|MIR	AAO42602.1 AY227752.1:89-1234
NCBI	gi|28625510|gb|AY227752.1|betalactams|Class_C_betalactamases|MIR	gi|28625510|gb|AY227752.1|89-1234
Resfinder	gi|28625510|gb|AY227752.1|betalactams|Class_C_betalactamases|MIR	blaMIR-2_1_AY227752
CARD	CARD|pvgb|NC_002952|5036-6968|ARO:3003301|Staphylococcus|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|gyrB|RequiresSNPConfirmation	@pvgb|NC_002952|5036-6968|ARO:3003301|Staphylococcus aureus gyrB conferring resistance to aminocoumarin [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	CARD|pvgb|NC_002952|5036-6968|ARO:3003301|Staphylococcus|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|gyrB|RequiresSNPConfirmation	gi|974161314|gb|CP012018.1|5020-6952 gi|974158397|gb|CP012015.1|5020-6952 gi|974155539|gb|CP012013.1|5021-6953 gi|974152716|gb|CP012012.1|5037-6969 gi|974149849|gb|CP012011.1|5037-6969 gi|703576232|gb|CP009554.1|5037-6969 gi|700315490|gb|CP009681.1|5036-6968 gi|685631213|gb|CP009361.1|5064-6996 gi|657154530|gb|CP007447.1|5035-6967 gi|554590848|gb|CP006838.1|5037-6969
ARG-ANNOT	Bla|OXA-143|GQ861437|2914-3741|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-143:GQ861437:2914-3741:828
CARD	Bla|OXA-143|GQ861437|2914-3741|828|betalactams|Class_D_betalactamases|OXA	@phgb|GQ861437|2913-3741|ARO:3001654|OXA-143 [Acinetobacter baumannii]
Lahey	Bla|OXA-143|GQ861437|2914-3741|828|betalactams|Class_D_betalactamases|OXA	ACX70402.1 GQ861437.1:2914-3741
NCBI	Bla|OXA-143|GQ861437|2914-3741|828|betalactams|Class_D_betalactamases|OXA	gi|261348121|gb|GQ861437.1|2914-3741 gi|549444472|gb|KF601342.1|1-713 gi|549444474|gb|KF601343.1|1-705 gi|549444462|gb|KF601337.1|1-688 gi|549444476|gb|KF601344.1|1-678 gi|549444470|gb|KF601341.1|1-677 gi|549444468|gb|KF601340.1|1-659 gi|549444464|gb|KF601338.1|1-647 gi|549444466|gb|KF601339.1|1-614
Resfinder	Bla|OXA-143|GQ861437|2914-3741|828|betalactams|Class_D_betalactamases|OXA	blaOXA-143_1_GQ861437
ARG-ANNOT	Bla|CMY-77|JX440353|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-77:JX440353:1027-2172:1146
CARD	Bla|CMY-77|JX440353|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JX440353|1026-2172|ARO:3002090|CMY-77 [Citrobacter sp. W1065]
Lahey	Bla|CMY-77|JX440353|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	AFU25644.1 JX440353.1:1027-2172
NCBI	Bla|CMY-77|JX440353|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	gi|407731526|gb|JX440353.1|1027-2172
Resfinder	Bla|CMY-77|JX440353|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-77_1_JX440353
NCBI	Bla|SHV-36_1_AY677211|betalactams|Class_A_betalactamases|SHV	gi|50513038|gb|AY677211.1|1-861
Resfinder	Bla|SHV-36_1_AY677211|betalactams|Class_A_betalactamases|SHV	blaSHV-36_1_AY677211
NCBI	gi|347364916|gb|HM569226.2|betalactams|Class_C_betalactamases|CMY	gi|828983113|gb|CP011657.1|2365948-2367175 gi|828940051|gb|CP011612.1|3646139-3644912 gi|347364916|gb|HM569226.2|1040-2267
CARD	16|AJ252200.1|AJ252200|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	@phgb|AJ252200|1278-4401|ARO:3003056|smeE [Stenotrophomonas maltophilia]
NCBI	16|AJ252200.1|AJ252200|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	gi|11071582|emb|AJ252200.1|1279-4401 gi|951301122|gb|CP013140.1|5821986-5821955 gi|951709680|gb|CP011130.1|276309-276339
ARG-ANNOT	Flq|QnrB27|HM439641|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB27:HM439641:1-645:645
CARD	Flq|QnrB27|HM439641|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HM439641|0-645|ARO:3002742|QnrB27 [Citrobacter braakii]
NCBI	Flq|QnrB27|HM439641|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224413|ref|NG_041068.1|1-645
Resfinder	Flq|QnrB27|HM439641|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB27_1_HM439641
CARD	38|DQ516970.1|DQ516970|Multi-drug_resistance|Multi-drug_efflux_pumps|MSBA	@phgb|DQ516970|0-1987|ARO:3002882|lmrD [Lactococcus lactis subsp. lactis]
NCBI	38|DQ516970.1|DQ516970|Multi-drug_resistance|Multi-drug_efflux_pumps|MSBA	gi|326405597|gb|CP002365.1|298712-300698 gi|13400022|gb|AE005176.1|310899-312885 gi|99079574|gb|DQ516960.1|1-1987
NCBI	gi|126202236|gb|EF420108.1|betalactams|Class_A_betalactamases|VEB	gi|126202236|gb|EF420108.1|1-1017
CARD	Phe|AF332662.1|gene1|Phenicol|Phenicol_efflux_pumps|FLOR	@phgb|AF332662|1656-2871|ARO:3002705|floR [Klebsiella pneumoniae]
NCBI	Phe|AF332662.1|gene1|Phenicol|Phenicol_efflux_pumps|FLOR	gi|768030860|gb|KP276584.1|33350-34564 gi|377806473|gb|JQ010984.1|33345-34559 gi|695208230|ref|NG_035501.1|1657-2871
Lahey	1168|unknown_id|unknown_name|betalactams|Class_D_betalactamases|OXA	AIZ00987.1 KM401566.1:2033-1212
NCBI	1168|unknown_id|unknown_name|betalactams|Class_D_betalactamases|OXA	gi|908841704|gb|KR153292.1|1443-622 gi|728895382|gb|KM401566.1|2033-1212
ARG-ANNOT	Bla|CTX-M-72|AY847148|9-884|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-72:AY847148:9-884:876
CARD	Bla|CTX-M-72|AY847148|9-884|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY847148|8-884|ARO:3001933|CTX-M-72 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-72|AY847148|9-884|876|betalactams|Class_A_betalactamases|CTX	AAV97957.1 AY847148.1:9-884
NCBI	Bla|CTX-M-72|AY847148|9-884|876|betalactams|Class_A_betalactamases|CTX	gi|695211160|ref|NG_036029.1|9-884
Resfinder	Bla|CTX-M-72|AY847148|9-884|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-72_1_AY847148
ARG-ANNOT	1272|AY619003.1|AY619003|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-63:AY619003:704-1510:807
CARD	1272|AY619003.1|AY619003|betalactams|Class_D_betalactamases|OXA	@phgb|AY619003|703-1510|ARO:3001764|OXA-63 [Brachyspira pilosicoli]
Lahey	1272|AY619003.1|AY619003|betalactams|Class_D_betalactamases|OXA	AAU88145.1 AY619003.1:704-1510
NCBI	1272|AY619003.1|AY619003|betalactams|Class_D_betalactamases|OXA	gi|52854082|gb|AY619003.1|704-1510
Resfinder	1272|AY619003.1|AY619003|betalactams|Class_D_betalactamases|OXA	blaOXA-63_1_AY619003
NCBI	Sul|sul1_28|JN790946|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|375155456|gb|JN790946.1|3874-4713
Resfinder	Sul|sul1_28|JN790946|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_28_JN790946
CARD	CARD|phgb|U00096|3412802-3413465|ARO:3000656|acrS|Aminoglycosides|Aminoglycoside_efflux_regulator|ACRS	@phgb|U00096|3412802-3413465|ARO:3000656|acrS [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|3412802-3413465|ARO:3000656|acrS|Aminoglycosides|Aminoglycoside_efflux_regulator|ACRS	gi|985000614|gb|CP014225.1|1610003-1610666 gi|958627747|gb|CP013253.1|10858-10195 gi|939732440|gb|CP011343.2|3388537-3389200 gi|939731527|gb|CP011342.2|3389191-3389854 gi|937526251|gb|CP012870.1|1228853-1228190 gi|937521852|gb|CP012869.1|1228853-1228190 gi|937517453|gb|CP012868.1|1228853-1228190 gi|932857508|emb|LN877770.1|4237299-4237962 gi|923416119|gb|CP011113.1|3369520-3370183 gi|899729770|gb|CP012127.1|3387248-3387911
NCBI	Tet|tet39_3_DQ195075|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET39	gi|77745205|gb|DQ195075.1|1-676 gi|924867386|gb|KT346360.1|2807-2134 gi|187384667|gb|EU495991.1|688-15 gi|187384663|gb|EU495989.1|24-697 gi|695211247|ref|NG_036045.1|1043-1716 gi|187384657|gb|EU495986.1|26-697
ARG-ANNOT	gi|334546849|gb|JF812965.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-120:JF812965:1-861:861
CARD	gi|334546849|gb|JF812965.1|betalactams|Class_A_betalactamases|SHV	@phgb|JF812965|0-861|ARO:3001167|SHV-120 [Escherichia coli]
Lahey	gi|334546849|gb|JF812965.1|betalactams|Class_A_betalactamases|SHV	AEG79634.1 JF812965.1:1-861
NCBI	gi|334546849|gb|JF812965.1|betalactams|Class_A_betalactamases|SHV	gi|334546849|gb|JF812965.1|1-861
Resfinder	gi|334546849|gb|JF812965.1|betalactams|Class_A_betalactamases|SHV	blaSHV-120_1_JF812965
NCBI	Flq|HE999704.1|gene3170|Multi-drug_resistance|Multi-drug_efflux_pumps|NORB	gi|584269433|emb|HG813249.1|237528-236128 gi|441472679|emb|HE999705.1|2736527-2735127 gi|441469547|emb|HE999704.1|2736181-2734781
NCBI	gi|56554772|gb|AY847148.1|betalactams|Class_A_betalactamases|CTX	gi|695211160|ref|NG_036029.1|1-925
ARG-ANNOT	Bla|CMY-27|EU515250|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-27:EU515250:1-1146:1146
CARD	Bla|CMY-27|EU515250|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|EU515250|0-1146|ARO:3002038|CMY-27 [Escherichia coli]
Lahey	Bla|CMY-27|EU515250|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ACA30421.1 EU515250.1:1-1146
NCBI	Bla|CMY-27|EU515250|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|168824142|gb|EU515250.1|1-1146
Resfinder	Bla|CMY-27|EU515250|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-27_1_EU515250
NCBI	gi|387861048|gb|JQ711184.1|betalactams|Class_C_betalactamases|CMY	gi|387861048|gb|JQ711184.1|1027-2255 gi|858970176|gb|KM985464.1|1-1146
ARG-ANNOT	719|FM200786.1|FM200786|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA12:FM200786:1-737:737
NCBI	719|FM200786.1|FM200786|betalactams|Class_B_betalactamases|CFIA	gi|238908269|emb|FM200790.1|175-911 gi|238908263|emb|FM200787.1|16-752 gi|238908261|emb|FM200786.1|1-737
ARG-ANNOT	AGly|Aac3-I|AJ877225|5293-5757|465|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-I:AJ877225:5293-5757:465
NCBI	AGly|Aac3-I|AJ877225|5293-5757|465|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|66862639|emb|AJ877225.1|5757-5293
ARG-ANNOT	Bla|TEM-78|AF190693|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-78:AF190693:209-1069:861
CARD	Bla|TEM-78|AF190693|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF190693|208-1069|ARO:3000944|TEM-78 [Escherichia coli]
Lahey	Bla|TEM-78|AF190693|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAF05612.1 AF190693.1:209-1069
NCBI	Bla|TEM-78|AF190693|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|6176543|gb|AF190693.1|AF190693|209-1069
Resfinder	Bla|TEM-78|AF190693|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-78_1_AF190693
Lahey	Bla|OXA-51_7_EU255292|betalactams|Class_D_betalactamases|OXA	ABX45062.1 EU255292.1:1-825
NCBI	Bla|OXA-51_7_EU255292|betalactams|Class_D_betalactamases|OXA	gi|160623389|gb|EU255292.1|1-825
Resfinder	Bla|OXA-51_7_EU255292|betalactams|Class_D_betalactamases|OXA	blaOXA-51_7_EU255292
CARD	CARD|phgb|GQ244501|59-1619|ARO:3000573|tet43|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET43	@phgb|GQ244501|59-1619|ARO:3000573|tet43 [uncultured bacterium AOTet43]
NCBI	CARD|phgb|GQ244501|59-1619|ARO:3000573|tet43|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET43	gi|242129309|gb|GQ244501.1|60-1620
CARD	CARD|phgb|U35369|2358-3165|ARO:3002956|vanYB|Glycopeptides|VanB-type_accessory_protein|VANYB	@phgb|U35369|2358-3165|ARO:3002956|vanYB [Enterococcus faecalis]
NCBI	CARD|phgb|U35369|2358-3165|ARO:3002956|vanYB|Glycopeptides|VanB-type_accessory_protein|VANYB	gi|29350190|gb|AE016830.1|2216607-2215801 gi|1209525|gb|U35369.1|EFU35369|2359-3165
ARG-ANNOT	AGly|Aad9|M69221|271-1038|768|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT9	(Agly)Aad9:M69221:271-1038:768
NCBI	AGly|Aad9|M69221|271-1038|768|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT9	gi|814617358|gb|KM009065.1|5150-4383 gi|469521017|gb|KC747117.1|276-1043 gi|410110450|gb|JX964749.1|8169-7402 gi|385137449|gb|JQ776640.1|4208-4975 gi|319919358|gb|HQ122651.1|2217-2984 gi|262478123|gb|GU126429.1|1352-2119 gi|237871515|gb|FJ946915.1|2728-3495 gi|219718108|gb|FJ410919.1|3253-4020 gi|219718104|gb|FJ410918.1|3496-4263 gi|219718101|gb|FJ410917.1|1825-2592
Lahey	Bla|OXA-114_5_HM056041|betalactams|Class_D_betalactamases|OXA	ADI23934.1 HM056041.1:1-828
NCBI	Bla|OXA-114_5_HM056041|betalactams|Class_D_betalactamases|OXA	gi|297179874|gb|HM056041.1|1-828
Resfinder	Bla|OXA-114_5_HM056041|betalactams|Class_D_betalactamases|OXA	blaOXA-114_5_HM056041
NCBI	gi|32187778|emb|AJ567481.1|betalactams|Class_A_betalactamases|CTX	gi|32187778|emb|AJ567481.1|1-884
ARG-ANNOT	AGly|Str|X92946|18908-18060|849|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	(AGly)Str:X92946:18908-18060:849
NCBI	AGly|Str|X92946|18908-18060|849|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|748448277|gb|KP036966.1|9222-10070 gi|2467210|emb|X92946.1|18908-18060 gi|695211393|ref|NG_036067.1|7990-8723 gi|46643|emb|X06627.1|4323-4397
ARG-ANNOT	Bla|OXA-36|AF300985|1-739|739|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-36:AF300985:1-739:739
CARD	Bla|OXA-36|AF300985|1-739|739|betalactams|Class_D_betalactamases|OXA	@phgb|AF300985|0-739|ARO:3001430|OXA-36 [Pseudomonas aeruginosa]
NCBI	Bla|OXA-36|AF300985|1-739|739|betalactams|Class_D_betalactamases|OXA	gi|10946342|gb|AF300985.1|AF300985|1-739
Resfinder	Bla|OXA-36|AF300985|1-739|739|betalactams|Class_D_betalactamases|OXA	blaOXA-36_1_AF300985
NCBI	1758|JN676230.2|JN676230|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|944374642|gb|KT692980.1|679-1470 gi|941350200|gb|KT345946.1|27861-28652 gi|939537623|gb|KR610435.1|635-1426 gi|930190865|emb|LN555650.1|260489-259698 gi|930189590|emb|HG530658.1|196197-195406 gi|925216761|gb|KR028103.1|642-1433 gi|825088700|gb|KP975077.1|104895-104104 gi|821392896|gb|KP873171.1|18696-17905 gi|768032361|gb|KM975294.1|2539-3330 gi|752292861|emb|LN794247.1|62181-61390
Resfinder	1758|JN676230.2|JN676230|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA1_5_JX185132
CARD	1520|AF174129.3|AF174129|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|AF174129|1351-1825|ARO:3003014|dfrA16 [Escherichia coli]
NCBI	1520|AF174129.3|AF174129|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|825088700|gb|KP975077.1|44394-43921 gi|636632010|gb|KJ579054.1|151-624 gi|636632003|gb|KJ575543.1|117-590 gi|471180320|gb|KC414000.1|78-551 gi|297382634|gb|GQ434004.1|82-555 gi|284520636|gb|GU324550.1|101-574 gi|119223635|gb|EF028203.1|21-494 gi|73913580|gb|DQ157752.1|160-633 gi|695209508|ref|NG_035842.1|1511-1984 gi|695209367|ref|NG_035809.1|1366-1839
Resfinder	1520|AF174129.3|AF174129|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA16_1_DQ316603
CARD	Bla|KF986255.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF986255|16-841|ARO:3001560|OXA-374 [Acinetobacter baumannii]
Lahey	Bla|KF986255.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30274.1 KF986255.1:17-841
NCBI	Bla|KF986255.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389145|gb|KF986255.1|17-841
CARD	CARD|pvgb|CP001918|4816613-4817537|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP001918|4816613-4817537|ARO:3001312|elfamycin resistant EF-Tu [Enterobacter cloacae subsp. cloacae ATCC 13047]
NCBI	CARD|pvgb|CP001918|4816613-4817537|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|295054830|gb|CP001918.1|4816614-4817538
NCBI	gi|157676817|emb|AM087454.1|betalactams|Class_A_betalactamases|TEM	gi|157676817|emb|AM087454.1|1-1092 gi|961666360|gb|KT185451.1|87734-87690
NCBI	gi|388564859|gb|JQ733579.1|betalactams|Class_C_betalactamases|CMY	gi|388564859|gb|JQ733579.1|1028-2255
CARD	gi|698174157|gb|KM087833.1|betalactams|Class_C_betalactamases|ACT	@phgb|KM087833|0-1146|ARO:3001850|ACT-30 [Enterobacter cloacae]
Lahey	gi|698174157|gb|KM087833.1|betalactams|Class_C_betalactamases|ACT	AIT76086.1 KM087833.1:1-1146
NCBI	gi|698174157|gb|KM087833.1|betalactams|Class_C_betalactamases|ACT	gi|698174157|gb|KM087833.1|1-1146
CARD	gi|433285826|emb|HE819404.1|betalactams|Class_C_betalactamases|CMY	@phgb|HE819404|0-1146|ARO:3002103|CMY-90 [Citrobacter freundii]
Lahey	gi|433285826|emb|HE819404.1|betalactams|Class_C_betalactamases|CMY	CCK86743.1 HE819404.1:1-1146
NCBI	gi|433285826|emb|HE819404.1|betalactams|Class_C_betalactamases|CMY	gi|433285826|emb|HE819404.1|1-1146
ARG-ANNOT	Gly|VanXYc4|EU151753|1078-1650|573|Glycopeptides|VanC-type_resistance_protein|VANXYC	(Gly)VanXYc4:EU151753:1078-1650:573
NCBI	Gly|VanXYc4|EU151753|1078-1650|573|Glycopeptides|VanC-type_resistance_protein|VANXYC	gi|161779851|gb|EU151753.1|1078-1650
Resfinder	Gly|VanXYc4|EU151753|1078-1650|573|Glycopeptides|VanC-type_resistance_protein|VANXYC	VanXY-C_4_EU151753
ARG-ANNOT	AGly|RmtD2|HQ401565|14882-14139|744|Aminoglycosides|16S_rRNA_methyltransferases|RMTD	(AGly)RmtD2:HQ401565:14882-14139:744
NCBI	AGly|RmtD2|HQ401565|14882-14139|744|Aminoglycosides|16S_rRNA_methyltransferases|RMTD	gi|970697631|gb|KT935446.1|90249-90992 gi|321159248|gb|HQ401567.1|5092-4349 gi|321159238|gb|HQ401566.1|5092-4349 gi|321159218|gb|HQ401565.1|14882-14139
CARD	Bla|A_2_AY954728|betalactams|Class_A_betalactamases|BLAA	@phgb|AY954728|11-896|ARO:3003558|y56 beta-lactamase [Yersinia enterocolitica]
NCBI	Bla|A_2_AY954728|betalactams|Class_A_betalactamases|BLAA	gi|61744054|gb|AY954728.1|12-896
Resfinder	Bla|A_2_AY954728|betalactams|Class_A_betalactamases|BLAA	blaA_2_AY954728
CARD	Flq|QnrB69_1_KC580658|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC580658|0-645|ARO:3002781|QnrB69 [Citrobacter freundii]
NCBI	Flq|QnrB69_1_KC580658|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|496297327|gb|KC580658.1|1-645
Resfinder	Flq|QnrB69_1_KC580658|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB69_1_KC580658
CARD	CARD|phgb|JQ724542|174-1050|ARO:3001984|CTX-M-125|betalactams|Class_A_betalactamases|CTX	@phgb|JQ724542|174-1050|ARO:3001984|CTX-M-125 [Enterobacter cloacae]
NCBI	CARD|phgb|JQ724542|174-1050|ARO:3001984|CTX-M-125|betalactams|Class_A_betalactamases|CTX	gi|397911950|gb|JQ724542.1|175-1051
NCBI	MLS|vatE_11_AY043213|MLS|Streptogramin_A_O-acetyltransferase|VATE	gi|15266484|gb|AY043213.1|1-645
Resfinder	MLS|vatE_11_AY043213|MLS|Streptogramin_A_O-acetyltransferase|VATE	vat(E)_11_AY043213
ARG-ANNOT	Phe|CatA1|V00622|244-903|660|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)CatA1:V00622:244-903:660
CARD	Phe|CatA1|V00622|244-903|660|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|V00622|243-903|ARO:3002683|catI [Escherichia coli]
NCBI	Phe|CatA1|V00622|244-903|660|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|982281055|emb|LT009459.1|6170-6829 gi|982281046|emb|LT009458.1|6170-6829 gi|982281035|emb|LT009457.1|6170-6829 gi|982281026|emb|LT009456.1|6170-6829 gi|982281015|emb|LT009455.1|6170-6829 gi|982281007|emb|LT009454.1|6170-6829 gi|982281000|emb|LT009453.1|6170-6829 gi|982280991|emb|LT009452.1|6170-6829 gi|982280980|emb|LT009451.1|6170-6829 gi|982280970|emb|LT009450.1|6170-6829
Resfinder	Phe|CatA1|V00622|244-903|660|Phenicol|Chloramphenicol_acetyltransferases|CATA	catA1_1_V00622
CARD	Tet|tetE_3_L06940|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	@phgb|L06940|0-1218|ARO:3000173|tetE [Escherichia coli]
NCBI	Tet|tetE_3_L06940|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	gi|290471|gb|L06940.1|ECOTCRESIS|21-1238 gi|674304081|gb|KJ850494.1|1-1134 gi|327195566|gb|HQ399593.1|1-273 gi|296044842|gb|HM041202.1|195-1 gi|296044846|gb|HM041204.1|189-1
Resfinder	Tet|tetE_3_L06940|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETE	tet(E)_3_L06940
ARG-ANNOT	Bla|PER-1|EF535600|1-927|927|betalactams|Class_A_betalactamases|PER	(Bla)PER-1:EF535600:1-927:927
Lahey	Bla|PER-1|EF535600|1-927|927|betalactams|Class_A_betalactamases|PER	CAA79968.1 Z21957.1:1211-285
NCBI	Bla|PER-1|EF535600|1-927|927|betalactams|Class_A_betalactamases|PER	gi|971493847|gb|CP010351.1|173885-174811 gi|760459642|gb|KP688397.1|127838-128764 gi|749800202|gb|KP076293.1|7413-8339 gi|686483896|gb|KM111269.1|1657-2583 gi|695227747|ref|NG_041674.1|6875-7801 gi|695228162|ref|NG_041731.1|1402-2328 gi|695227267|ref|NG_041634.1|2299-3225 gi|390276140|gb|JQ780836.1|1666-2592 gi|375151084|emb|FR847979.1|3940-4866 gi|322506180|gb|CP001921.1|285837-284911
Resfinder	Bla|PER-1|EF535600|1-927|927|betalactams|Class_A_betalactamases|PER	blaPER-1_1_GU944725
ARG-ANNOT	Bla|VIM-38|KC469971|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-38:KC469971:1-801:801
CARD	Bla|VIM-38|KC469971|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|KC469971|0-801|ARO:3002308|VIM-38 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-38|KC469971|1-801|801|betalactams|Class_B_betalactamases|VIM	AGE83081.2 KC469971.2:1-801
NCBI	Bla|VIM-38|KC469971|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|465214873|gb|KC469971.2|1-801
Resfinder	Bla|VIM-38|KC469971|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-38_1_KC469971
ARG-ANNOT	gi|1928921|gb|U92041.1|ECU92041|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-8:U92041:1-861:861
CARD	gi|1928921|gb|U92041.1|ECU92041|betalactams|Class_A_betalactamases|SHV	@phgb|U92041|0-861|ARO:3001067|SHV-8 [Escherichia coli]
Lahey	gi|1928921|gb|U92041.1|ECU92041|betalactams|Class_A_betalactamases|SHV	AAB51384.1 U92041.1:1-861
NCBI	gi|1928921|gb|U92041.1|ECU92041|betalactams|Class_A_betalactamases|SHV	gi|1928921|gb|U92041.1|ECU92041|1-861
Resfinder	gi|1928921|gb|U92041.1|ECU92041|betalactams|Class_A_betalactamases|SHV	blaSHV-8_1_ECU92041
ARG-ANNOT	Bla|CMY-81|JQ733578|1008-2153|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-81:JQ733578:1008-2153:1146
CARD	Bla|CMY-81|JQ733578|1008-2153|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ733578|1007-2153|ARO:3002094|CMY-81 [Citrobacter freundii]
Lahey	Bla|CMY-81|JQ733578|1008-2153|1146|betalactams|Class_C_betalactamases|CMY	AFK73452.1 JQ733578.1:1008-2153
NCBI	Bla|CMY-81|JQ733578|1008-2153|1146|betalactams|Class_C_betalactamases|CMY	gi|388564855|gb|JQ733578.1|1008-2153
Resfinder	Bla|CMY-81|JQ733578|1008-2153|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-81_1_JQ733578
NCBI	Bla|X04121.1|gene1|betalactams|Class_A_betalactamases|BLAZ	gi|695196521|ref|NG_034440.1|140-985
NCBI	gi|2113850|emb|X98101.1|betalactams|Class_A_betalactamases|SHV	gi|2113850|emb|X98101.1|74-1018
ARG-ANNOT	Gly|VanXYc2_c3|EU151760|1078-1650|573|Glycopeptides|VanC-type_resistance_protein|VANXYC	(Gly)VanXYc2/3:EU151760:1078-1650:573
NCBI	Gly|VanXYc2_c3|EU151760|1078-1650|573|Glycopeptides|VanC-type_resistance_protein|VANXYC	gi|161779875|gb|EU151760.1|1078-1650 gi|161779857|gb|EU151754.1|1078-1650
Resfinder	Gly|VanXYc2_c3|EU151760|1078-1650|573|Glycopeptides|VanC-type_resistance_protein|VANXYC	VanXY-C_5_EU151754
ARG-ANNOT	Bla|RAHN-1|AF338038|4685-5572|888|betalactams|Class_A_betalactamases|RAHN	(Bla)RAHN-1:AF338038:4685-5572:888
NCBI	Bla|RAHN-1|AF338038|4685-5572|888|betalactams|Class_A_betalactamases|RAHN	gi|15077502|gb|AF338038.1|AF338038|4685-5572 gi|557668392|gb|KF484028.1|1-477
Resfinder	Bla|RAHN-1|AF338038|4685-5572|888|betalactams|Class_A_betalactamases|RAHN	blaRAHN-1_2_AF338038
NCBI	663|unknown_id|unknown_name|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|958108507|emb|LN824138.1|12203-11571 gi|958102843|emb|LN824133.1|2817474-2816842 gi|957647579|dbj|AP017302.1|2612956-2612324 gi|550602065|gb|KF295829.1|123424-122792 gi|443299869|gb|JQ955744.1|4652-4020 gi|695214903|ref|NG_036913.1|8188-7556 gi|493665175|dbj|AP012055.1|50915-51547 gi|695226706|ref|NG_041561.1|4660-4028
NCBI	Bla|GOB-16_2_AY899331|betalactams|Class_B_betalactamases|GOB	gi|58802938|gb|AY899331.1|1-873
Resfinder	Bla|GOB-16_2_AY899331|betalactams|Class_B_betalactamases|GOB	blaGOB-16_2_AY899331
CARD	Bla|CTX-M-61_1_EF219142|betalactams|Class_A_betalactamases|CTX	@phgb|EF219142|10-886|ARO:3001922|CTX-M-61 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	Bla|CTX-M-61_1_EF219142|betalactams|Class_A_betalactamases|CTX	ABN09669.1 EF219142.1:11-886
NCBI	Bla|CTX-M-61_1_EF219142|betalactams|Class_A_betalactamases|CTX	gi|124365351|gb|EF219142.1|11-886
Resfinder	Bla|CTX-M-61_1_EF219142|betalactams|Class_A_betalactamases|CTX	blaCTX-M-61_1_EF219142
NCBI	Flq|CP001581.1|gene7|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|226840737|gb|CP001581.1|6499-9039
NCBI	gi|2113848|emb|X98102.1|betalactams|Class_A_betalactamases|SHV	gi|2113848|emb|X98102.1|74-1018
NCBI	Bla|SHV-1_2_X98100|betalactams|Class_A_betalactamases|SHV	gi|2113862|emb|X98100.1|74-934
Resfinder	Bla|SHV-1_2_X98100|betalactams|Class_A_betalactamases|SHV	blaSHV-1_2_X98100
ARG-ANNOT	AGly|Sph|AY037297|3548-2706|801|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	(AGly)Sph:AY037297:3548-2706:801
NCBI	AGly|Sph|AY037297|3548-2706|801|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|768968335|gb|KM409652.1|8305-9147 gi|381287545|gb|JN983042.1|196722-197564 gi|159885477|dbj|AB366441.1|11268-12110 gi|150958624|gb|CP000744.1|3857163-3856321 gi|115500638|dbj|AB255435.1|117654-118496 gi|31321897|gb|AY037297.1|3548-2706 gi|405822|gb|U00004.1|2743-3585 gi|2055395|gb|U90436.1|XXU90436|9291-10133 gi|43744|emb|X01702.1|443-1285 gi|818850|gb|U25548.1|XXU25548|4658-5500
ARG-ANNOT	Bla|OXA-117|GQ423625|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-117:GQ423625:1-825:825
Lahey	Bla|OXA-117|GQ423625|1-825|825|betalactams|Class_D_betalactamases|OXA	ACV49885.1 GQ423625.1:1-825
NCBI	Bla|OXA-117|GQ423625|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|257195214|gb|GQ423625.1|1-825
Resfinder	Bla|OXA-117|GQ423625|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-117_1_GQ423625
ARG-ANNOT	Bla|TEM-29|AJ277416|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-29:AJ277416:1-861:861
NCBI	Bla|TEM-29|AJ277416|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|695208063|ref|NG_035473.1|1-861 gi|808157946|gb|KP870110.1|4250-4200
NCBI	Mdr|NC_002695.1.914983|Multi-drug_resistance|MDR_regulator|CPXAR	gi|937297913|gb|CP012802.1|4777311-4775938 gi|734586714|gb|CP010304.1|4924588-4923215 gi|666001753|gb|CP008805.1|4959842-4958469 gi|386794017|gb|CP001925.1|4831687-4830314 gi|374356928|gb|CP003109.1|4700906-4699533 gi|290760697|gb|CP001846.1|4792577-4791204 gi|254590536|gb|CP001368.1|4964108-4962735 gi|209752437|gb|EU891945.1|1-1374 gi|209157093|gb|CP001164.1|5008048-5006675 gi|47118301|dbj|BA000007.2|4904935-4903562
NCBI	gi|1524022|emb|X95401.1|betalactams|Class_A_betalactamases|TEM	gi|1524022|emb|X95401.1|196-1091 gi|479327147|gb|KC354802.1|11954-11985
NCBI	AGly|EU886977.1|gene2|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|208436664|gb|EU886977.1|536-1110
ARG-ANNOT	gi|260080604|gb|GQ853680.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-149:GQ853680:1-825:825
CARD	gi|260080604|gb|GQ853680.1|betalactams|Class_D_betalactamases|OXA	@phgb|GQ853680|0-825|ARO:3001454|OXA-149 [Acinetobacter baumannii]
Lahey	gi|260080604|gb|GQ853680.1|betalactams|Class_D_betalactamases|OXA	ACX31141.1 GQ853680.1:1-825
NCBI	gi|260080604|gb|GQ853680.1|betalactams|Class_D_betalactamases|OXA	gi|260080604|gb|GQ853680.1|1-825
Resfinder	gi|260080604|gb|GQ853680.1|betalactams|Class_D_betalactamases|OXA	blaOXA-149_1_GQ853680
ARG-ANNOT	AGly|AadA1-pm|JQ690540|7968-8798|831|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA1-pm:JQ690540:7968-8798:831
NCBI	AGly|AadA1-pm|JQ690540|7968-8798|831|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|695226656|ref|NG_041554.1|7968-8798
CARD	CARD|phgb|Z21957.1|284-1211|ARO:3002363|PER-1|betalactams|Class_A_betalactamases|PER	@phgb|Z21957.1|284-1211|ARO:3002363|PER-1 [Pseudomonas aeruginosa]
NCBI	CARD|phgb|Z21957.1|284-1211|ARO:3002363|PER-1|betalactams|Class_A_betalactamases|PER	gi|971493847|gb|CP010351.1|174811-173885 gi|760459642|gb|KP688397.1|128764-127838 gi|749800202|gb|KP076293.1|8339-7413 gi|686483896|gb|KM111269.1|2583-1657 gi|695227747|ref|NG_041674.1|7801-6875 gi|695228162|ref|NG_041731.1|2328-1402 gi|695227267|ref|NG_041634.1|3225-2299 gi|390276140|gb|JQ780836.1|2592-1666 gi|375151084|emb|FR847979.1|4866-3940 gi|322506180|gb|CP001921.1|284911-285837
ARG-ANNOT	gi|157497430|gb|EF534256.2|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-72:AY739646:1-828:828
CARD	gi|157497430|gb|EF534256.2|betalactams|Class_D_betalactamases|OXA	@phgb|EF534256|0-827|ARO:3001705|OXA-72 [Acinetobacter baumannii]
Lahey	gi|157497430|gb|EF534256.2|betalactams|Class_D_betalactamases|OXA	ABP87779.2 EF534256.2:1-827
NCBI	gi|157497430|gb|EF534256.2|betalactams|Class_D_betalactamases|OXA	gi|950835349|gb|KR535993.1|2833-2007 gi|908777896|gb|KT022421.1|7838-7012 gi|908777896|gb|KT022421.1|33-1 gi|551843602|dbj|AB857844.1|288-1114 gi|695214926|ref|NG_036915.1|5334-6160 gi|511349898|dbj|AB823544.1|5268-6094 gi|441494715|gb|JX968505.1|870-44 gi|398359511|gb|JX069966.1|3012-2186 gi|398359511|gb|JX069966.1|9003-9829 gi|312064060|gb|HQ219688.1|6-832 gi|307128755|gb|GU199039.2|1206-2032 gi|204304419|gb|FJ157355.1|23-849
Resfinder	gi|157497430|gb|EF534256.2|betalactams|Class_D_betalactamases|OXA	blaOXA-72_1_GU199039
ARG-ANNOT	gi|283465830|emb|FN546177.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-45:FN546177:1-1146:1146
CARD	gi|283465830|emb|FN546177.1|betalactams|Class_C_betalactamases|CMY	@phgb|FN546177|0-1146|ARO:3002056|CMY-45 [Proteus mirabilis]
Lahey	gi|283465830|emb|FN546177.1|betalactams|Class_C_betalactamases|CMY	CBB16411.1 FN546177.1:1-1146
NCBI	gi|283465830|emb|FN546177.1|betalactams|Class_C_betalactamases|CMY	gi|283465830|emb|FN546177.1|1-1146
Resfinder	gi|283465830|emb|FN546177.1|betalactams|Class_C_betalactamases|CMY	blaCMY-45_1_FN546177
CARD	MLS|AF055922.1|gene2|MLS|23S_rRNA_methyltransferases|ERM32	@phgb|AF055922|1787-2630|ARO:3001299|tlrB [Streptomyces fradiae]
NCBI	MLS|AF055922.1|gene2|MLS|23S_rRNA_methyltransferases|ERM32	gi|4210925|gb|AF055922.1|AF055922|1788-2630 gi|4826568|emb|AJ005397.2|1772-1441
NCBI	gi|591389155|gb|KF986260.1|betalactams|Class_D_betalactamases|OXA	gi|591389155|gb|KF986260.1|1-888
ARG-ANNOT	1264|AY007784.1|AY007784|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-37:AY007784:1123-1923:801
CARD	1264|AY007784.1|AY007784|betalactams|Class_D_betalactamases|OXA	@phgb|AY007784|1122-1923|ARO:3001431|OXA-37 [Acinetobacter baumannii]
Lahey	1264|AY007784.1|AY007784|betalactams|Class_D_betalactamases|OXA	AAG33665.1 AY007784.1:1123-1923
NCBI	1264|AY007784.1|AY007784|betalactams|Class_D_betalactamases|OXA	gi|11345443|gb|AY007784.1|1123-1923
Resfinder	1264|AY007784.1|AY007784|betalactams|Class_D_betalactamases|OXA	blaOXA-37_1_AY007784
NCBI	gi|4827074|gb|U58495.2|KPU58495|betalactams|Class_C_betalactamases|ACT	gi|323541267|gb|HQ235646.1|659-1804 gi|323541257|gb|HQ235645.1|1087-2232 gi|4827074|gb|U58495.2|KPU58495|31-1176
NCBI	Sul|sul2_20_AJ830710|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|66840767|emb|AJ830710.1|146-961
Resfinder	Sul|sul2_20_AJ830710|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_20_AJ830710
NCBI	Bla|AF357599.1|gene1|betalactams|Class_C_betalactamases|CMY	gi|695214120|ref|NG_036738.1|6455-7759 gi|13591818|gb|AF357599.1|142-1446
CARD	1358|AB636283.1|AB636283|betalactams|Class_B_betalactamases|SMB	@phgb|AB636283|0-843|ARO:3000854|SMB-1 beta-lactamase [Serratia marcescens]
NCBI	1358|AB636283.1|AB636283|betalactams|Class_B_betalactamases|SMB	gi|356483106|dbj|AB636283.1|1-843
Resfinder	1358|AB636283.1|AB636283|betalactams|Class_B_betalactamases|SMB	blaSMB-1_1_AB636283
CARD	gi|49035768|gb|AY635904.1|betalactams|Class_B_betalactamases|VIM	@phgb|AY635904|0-801|ARO:3002284|VIM-14 [Pseudomonas aeruginosa]
Lahey	gi|49035768|gb|AY635904.1|betalactams|Class_B_betalactamases|VIM	AAT48653.1 AY635904.1:1-801
NCBI	gi|49035768|gb|AY635904.1|betalactams|Class_B_betalactamases|VIM	gi|219872982|gb|FJ445404.1|657-1457 gi|49035768|gb|AY635904.1|1-801 gi|825088496|gb|KP975075.1|7975-7820 gi|584292460|gb|KF850517.1|1484-1639 gi|346720643|gb|JF915437.1|900-1055 gi|346720640|gb|JF905459.1|1522-1677 gi|283580179|gb|GU250441.1|953-1108 gi|283580176|gb|GU250440.1|932-1087 gi|270210847|gb|GU181269.1|1564-1719 gi|269978383|gb|GU181265.1|1983-2138
Resfinder	gi|49035768|gb|AY635904.1|betalactams|Class_B_betalactamases|VIM	blaVIM-14_1_FJ445404
NCBI	Bla|SHV-11_10_EF035557|betalactams|Class_A_betalactamases|SHV	gi|124053902|gb|EF035557.1|1-861
Resfinder	Bla|SHV-11_10_EF035557|betalactams|Class_A_betalactamases|SHV	blaSHV-11_10_EF035557
ARG-ANNOT	Bla|CTX-M-89|FJ971899|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-89:FJ971899:1-876:876
CARD	Bla|CTX-M-89|FJ971899|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|FJ971899|30-906|ARO:3001949|CTX-M-89 [Proteus mirabilis]
Lahey	Bla|CTX-M-89|FJ971899|1-876|876|betalactams|Class_A_betalactamases|CTX	ACR56321.1 FJ971899.1:31-906
NCBI	Bla|CTX-M-89|FJ971899|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|238801079|gb|FJ971899.1|31-906
Resfinder	Bla|CTX-M-89|FJ971899|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-89_2_FJ971899
NCBI	1190|AJ243491.1|AJ243491|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|930190865|emb|LN555650.1|261077-260559 gi|930189590|emb|HG530658.1|196785-196267 gi|873463574|gb|KR106190.1|15787-15269 gi|730042884|gb|KJ571202.1|4590-5108 gi|825088700|gb|KP975077.1|106395-105877 gi|821392896|gb|KP873171.1|21051-20533 gi|768032361|gb|KM975294.1|1540-2058 gi|742797756|emb|LK054503.1|13276-13794 gi|636632016|gb|KJ579055.1|186-704 gi|635661965|gb|KJ547703.1|1034-1552
ARG-ANNOT	Bla|CMY-74|JX440349|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-74:JX440349:1027-2172:1146
CARD	Bla|CMY-74|JX440349|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JX440349|1026-2172|ARO:3002087|CMY-74 [Citrobacter braakii]
Lahey	Bla|CMY-74|JX440349|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	AFU25632.1 JX440349.1:1027-2172
NCBI	Bla|CMY-74|JX440349|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	gi|407731510|gb|JX440349.1|1027-2172
Resfinder	Bla|CMY-74|JX440349|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-74_1_JX440349
NCBI	ACou|CP000647.1|gene3444|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|150953431|gb|CP000647.1|3770116-3768221
ARG-ANNOT	Bla|LEN-5|AY633109|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-5:AY633109:1-861:861
CARD	Bla|LEN-5|AY633109|1-861|861|betalactams|Class_A_betalactamases|LEN	@phgb|AY633109|0-861|ARO:3002456|LEN-5 [Klebsiella pneumoniae]
NCBI	Bla|LEN-5|AY633109|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|52078045|gb|AY633109.1|1-861
Resfinder	Bla|LEN-5|AY633109|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN5_1_AY633109
CARD	CARD|phgb|AF540889|0-327|ARO:3002871|tet37|Tetracyclines|Tetracycline_inactivation_enzymes|TET37	@phgb|AF540889|0-327|ARO:3002871|tet37 [uncultured bacterium]
NCBI	CARD|phgb|AF540889|0-327|ARO:3002871|tet37|Tetracyclines|Tetracycline_inactivation_enzymes|TET37	gi|23345284|gb|AF540889.1|1-328
ARG-ANNOT	Bla|OXA-169|HM488990|1-822|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-169:HM488990:1-822:822
CARD	Bla|OXA-169|HM488990|1-822|822|betalactams|Class_D_betalactamases|OXA	@phgb|HM488990|0-822|ARO:3001469|OXA-169 [Acinetobacter baumannii]
Lahey	Bla|OXA-169|HM488990|1-822|822|betalactams|Class_D_betalactamases|OXA	ADK35873.1 HM488990.1:1-822
NCBI	Bla|OXA-169|HM488990|1-822|822|betalactams|Class_D_betalactamases|OXA	gi|300825677|gb|HM488990.1|1-822
Resfinder	Bla|OXA-169|HM488990|1-822|822|betalactams|Class_D_betalactamases|OXA	blaOXA-169_1_HM488990
NCBI	gi|264665731|gb|GQ290211.1|betalactams|Class_A_betalactamases|SHV	gi|264665731|gb|GQ290211.1|1-515
ARG-ANNOT	Bla|BlaA1|NC_010410|1803480-1804499|1020|betalactams|Class_A_betalactamases|BLAA	(Bla)BlaA1:NC_010410:1803480-1804499:1020
NCBI	Bla|BlaA1|NC_010410|1803480-1804499|1020|betalactams|Class_A_betalactamases|BLAA	gi|939559781|gb|CP012952.1|1931976-1930957 gi|787858845|gb|CP008706.1|1896096-1895077 gi|751410783|gb|CP010781.1|2104671-2105690 gi|213985689|gb|CP001172.1|1749243-1748224 gi|213054530|gb|CP001182.1|2243197-2244216 gi|169147133|emb|CU459141.1|1804499-1803480
NCBI	1573|LC031883.1|LC031883|Phenicol|Phenicol_efflux_pumps|CML	gi|765098769|dbj|LC031883.1|7618-8790 gi|374095356|gb|JN651402.1|1004-2176 gi|364524682|gb|JN108884.1|1015-2187 gi|335335057|gb|HQ634775.2|4155-5327 gi|330885969|gb|HQ880268.1|1017-2189 gi|330885964|gb|HQ880266.1|1023-2195 gi|330885950|gb|HQ880261.1|1022-2194 gi|329885280|gb|JF701188.1|1530-2702 gi|308826678|emb|FQ482074.1|78323-77151 gi|300391777|gb|HM175873.1|937-2109
CARD	CARD|phgb|AJ698325|14502-15417|ARO:3003203|TLA-2|betalactams|Class_A_betalactamases|TLA	@phgb|AJ698325|14502-15417|ARO:3003203|TLA-2 [uncultured bacterium]
NCBI	CARD|phgb|AJ698325|14502-15417|ARO:3003203|TLA-2|betalactams|Class_A_betalactamases|TLA	gi|54969619|emb|AJ698325.1|14503-15417
NCBI	gi|1488048|gb|U63835.1|PAU63835|betalactams|Class_D_betalactamases|OXA	gi|1488048|gb|U63835.1|PAU63835|1-1180 gi|828945263|gb|CP011614.1|36371-36570
ARG-ANNOT	894|unknown_id|unknown_name|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)Dfr23:AJ746361:6743-7403:561
NCBI	894|unknown_id|unknown_name|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|933685907|gb|KR827392.1|8140-7580 gi|695211084|ref|NG_036020.1|7303-6743
Resfinder	894|unknown_id|unknown_name|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA23_1_AJ746361
CARD	OXA|KF057027.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF057027|0-825|ARO:3001443|OXA-121 [Acinetobacter baumannii]
NCBI	OXA|KF057027.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|537430794|gb|KF057027.1|1-825
CARD	Bla|KF057034.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF057034|0-825|ARO:3001688|OXA-317 [Acinetobacter baumannii]
Lahey	Bla|KF057034.1|gene1|betalactams|Class_D_betalactamases|OXA	AGU69255.1 KF057034.1:1-825
NCBI	Bla|KF057034.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|537430808|gb|KF057034.1|1-825
CARD	CARD|phgb|M22999|492-1359|ARO:3002541|AAC3-VIIa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|M22999|492-1359|ARO:3002541|AAC(3)-VIIa [Streptomyces rimosus]
NCBI	CARD|phgb|M22999|492-1359|ARO:3002541|AAC3-VIIa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|153133|gb|M22999.1|STMAACC|493-1360
ARG-ANNOT	871|DQ022190.1|DQ022190|Glycopeptides|VanC-type_regulator|VANRC	(Gly)VanR-C:AF162694:5193-5888:696
CARD	871|DQ022190.1|DQ022190|Glycopeptides|VanC-type_regulator|VANRC	@phgb|AF162694|5192-5888|ARO:3002922|vanRC [Enterococcus gallinarum]
NCBI	871|DQ022190.1|DQ022190|Glycopeptides|VanC-type_regulator|VANRC	gi|67479934|gb|DQ022190.1|3987-4682 gi|9294728|gb|AF162694.1|AF162694|5193-5888 gi|971140326|emb|LN606600.1|661218-661246
Resfinder	871|DQ022190.1|DQ022190|Glycopeptides|VanC-type_regulator|VANRC	VanR-C_1_AF162694
CARD	MLS|ermF_4_M62487|MLS|23S_rRNA_methyltransferases|ERMF	@phgb|M62487|270-1071|ARO:3000498|ErmF [Bacteroides fragilis]
NCBI	MLS|ermF_4_M62487|MLS|23S_rRNA_methyltransferases|ERMF	gi|143942|gb|M62487.1|BNRERMFU|271-1071
Resfinder	MLS|ermF_4_M62487|MLS|23S_rRNA_methyltransferases|ERMF	erm(F)_4_M62487
CARD	CARD|phgb|KF730650|0-645|ARO:3002768|QnrB55|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KF730650|0-645|ARO:3002768|QnrB55 [Raoultella terrigena]
NCBI	CARD|phgb|KF730650|0-645|ARO:3002768|QnrB55|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|569533076|gb|KF730650.1|1-645
CARD	Bla|KF986257.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF986257|20-845|ARO:3001562|OXA-376 [Acinetobacter baumannii]
Lahey	Bla|KF986257.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30276.1 KF986257.1:21-845
NCBI	Bla|KF986257.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389149|gb|KF986257.1|21-845
ARG-ANNOT	Gly|VanR-D|AB242319|1-699|699|Glycopeptides|VanD-type_regulator|VANRD	(Gly)VanR-D:AB242319:1-699:699
CARD	Gly|VanR-D|AB242319|1-699|699|Glycopeptides|VanD-type_regulator|VANRD	@phgb|AY082011|0-699|ARO:3002923|vanRD [Enterococcus faecium]
NCBI	Gly|VanR-D|AB242319|1-699|699|Glycopeptides|VanD-type_regulator|VANRD	gi|109240378|dbj|AB242319.1|1-699 gi|27461214|gb|AY082011.1|1-699 gi|484574986|gb|CP005586.1|3026139-3026112
Resfinder	Gly|VanR-D|AB242319|1-699|699|Glycopeptides|VanD-type_regulator|VANRD	VanR-D_1_AB242319
CARD	CARD|phgb|AF488377|62-938|ARO:3001885|CTX-M-23|betalactams|Class_A_betalactamases|CTX	@phgb|AF488377|62-938|ARO:3001885|CTX-M-23 [Escherichia coli]
NCBI	CARD|phgb|AF488377|62-938|ARO:3001885|CTX-M-23|betalactams|Class_A_betalactamases|CTX	gi|19852069|gb|AF488377.1|63-939
NCBI	Mdr|NC_002953.2862195|Multi-drug_resistance|MDR_regulator|ARLR	gi|781886788|dbj|AP014653.1|1407915-1407256 gi|781883823|dbj|AP014652.1|1407915-1407256 gi|537389513|gb|CP003979.1|1395684-1395025 gi|49243355|emb|BX571857.1|1455508-1454849 gi|47118312|dbj|BA000033.2|1426954-1426295
NCBI	gi|209974341|gb|FJ360884.1|betalactams|Class_A_betalactamases|TEM	gi|209974341|gb|FJ360884.1|1-1074
NCBI	Tet|tetA_5_AJ419171|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|16945309|emb|AJ419171.1|2832-4031
Resfinder	Tet|tetA_5_AJ419171|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tet(A)_5_AJ419171
ARG-ANNOT	Bla|CTX-M-66|EF576988|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-66:EF576988:1-876:876
CARD	Bla|CTX-M-66|EF576988|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|EF576988|239-1115|ARO:3001927|CTX-M-66 [Proteus mirabilis]
Lahey	Bla|CTX-M-66|EF576988|1-876|876|betalactams|Class_A_betalactamases|CTX	ABQ45409.1 EF576988.1:240-1115
NCBI	Bla|CTX-M-66|EF576988|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|649725792|gb|KJ802617.1|1-876 gi|695212498|ref|NG_036425.1|240-1115
Resfinder	Bla|CTX-M-66|EF576988|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-66_1_EF576988
ARG-ANNOT	AGly|AadA12|AY665771|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA12:AY665771:1-792:792
CARD	AGly|AadA12|AY665771|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|FJ381668|56-848|ARO:3002612|aadA12 [Escherichia coli]
NCBI	AGly|AadA12|AY665771|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|675819286|emb|LM995849.1|69180-68389 gi|327536433|gb|JF267651.1|131752-132543 gi|226934259|gb|FJ855128.1|108-899 gi|695213782|ref|NG_036680.1|57-848 gi|55275992|gb|AY665771.1|1-792 gi|62871329|gb|AY940491.1|59-850
Resfinder	AGly|AadA12|AY665771|1-792|792|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA12_1_AY665771
CARD	Phe|cat_5_U35036|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|X68412|0-648|ARO:3002670|cat [Listeria monocytogenes]
NCBI	Phe|cat_5_U35036|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|1015405|gb|U35036.1|SAU35036|1167-1814 gi|311815|emb|X68412.1|1328-1975 gi|152664|gb|M90091.1|SBKCATA|86-730
Resfinder	Phe|cat_5_U35036|Phenicol|Chloramphenicol_acetyltransferases|CATA	cat_5_U35036
ARG-ANNOT	Bla|CTX-M-14|AF252622|1741-2616|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-14:AF252622:1741-2616:876;(Bla)CTX-M-18:AF325133:1-876:876
CARD	Bla|CTX-M-14|AF252622|1741-2616|876|betalactams|Class_A_betalactamases|CTX	@phgb|AF252622|1740-2616|ARO:3001877|CTX-M-14 [Escherichia coli]
Lahey	Bla|CTX-M-14|AF252622|1741-2616|876|betalactams|Class_A_betalactamases|CTX	AAF72530.1 AF252622.2:1741-2616
NCBI	Bla|CTX-M-14|AF252622|1741-2616|876|betalactams|Class_A_betalactamases|CTX	gi|971520884|gb|CP008697.1|325072-324197 gi|971520884|gb|CP008697.1|497623-496748 gi|937637793|gb|KT868530.1|64770-63895 gi|873464024|gb|KR259130.1|1551-2426 gi|940516921|dbj|LC091534.1|1244-2119 gi|926473678|gb|CP012627.1|2210-1335 gi|918462945|gb|KP987215.1|32694-31819 gi|808208566|gb|CP009233.1|70343-71218 gi|675439089|dbj|AB915400.1|4574-5449 gi|675439084|dbj|AB915399.1|2909-3784 gi|675439076|dbj|AB914799.1|5345-6220
Resfinder	Bla|CTX-M-14|AF252622|1741-2616|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-14_1_AF252622
CARD	CARD|pvgb|AL123456|1416180-1417347|ARO:3003455|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBR|RequiresSNPConfirmation	@pvgb|AL123456|1416180-1417347|ARO:3003455|Mycobacterium tuberculosis embR mutant conferring resistance to ethambutol [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|1416180-1417347|ARO:3003455|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBR|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|1424424-1425591 gi|984989958|gb|CP010339.1|1418297-1419464 gi|984985728|gb|CP010338.1|1419351-1420518 gi|984981517|gb|CP010337.1|1420026-1421193 gi|984976917|gb|CP010336.1|1414746-1415913 gi|984972452|gb|CP010335.1|1416631-1417798 gi|984963331|gb|CP010333.1|1423781-1424948 gi|984959134|gb|CP010332.1|1419039-1420206 gi|984954355|gb|CP010331.1|1413788-1414955 gi|984950177|gb|CP010330.1|1417468-1418635
NCBI	gi|595583481|gb|KF992027.1|betalactams|Class_C_betalactamases|ACT	gi|595583481|gb|KF992027.1|599-1846
NCBI	Phe|X92945|gene|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|30267504|gb|AY230218.1|12502-13149 gi|1857519|gb|U83488.1|SAU83488|4923-4276 gi|49071|emb|X65462.1|208-855 gi|12956985|emb|X92945.2|9582-8935 gi|392558|gb|U00453.1|3282-2635
ARG-ANNOT	gi|157285910|gb|EF650038.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-112:EF650038:1-825:825
CARD	gi|157285910|gb|EF650038.1|betalactams|Class_D_betalactamases|OXA	@phgb|EF650038|0-825|ARO:3001643|OXA-112 [Acinetobacter baumannii]
Lahey	gi|157285910|gb|EF650038.1|betalactams|Class_D_betalactamases|OXA	ABV31692.1 EF650038.1:1-825
NCBI	gi|157285910|gb|EF650038.1|betalactams|Class_D_betalactamases|OXA	gi|157285910|gb|EF650038.1|1-825
Resfinder	gi|157285910|gb|EF650038.1|betalactams|Class_D_betalactamases|OXA	blaOXA-112_1_EF650038
NCBI	gi|591542849|gb|KJ207203.1|betalactams|Class_C_betalactamases|CMY	gi|591542849|gb|KJ207203.1|1-1327
ARG-ANNOT	CARD|phgb|X97721|0-876|ARO:3000592|ErmN|MLS|23S_rRNA_methyltransferases|ERMN	(MLS)ErmN:X97721:160-1035:876
CARD	CARD|phgb|X97721|0-876|ARO:3000592|ErmN|MLS|23S_rRNA_methyltransferases|ERMN	@phgb|X97721|0-876|ARO:3000592|ErmN [Streptomyces fradiae]
NCBI	CARD|phgb|X97721|0-876|ARO:3000592|ErmN|MLS|23S_rRNA_methyltransferases|ERMN	gi|5123862|emb|X97721.2|160-1035 gi|5305790|gb|AF147704.1|AF147704|5859-5908
Resfinder	CARD|phgb|X97721|0-876|ARO:3000592|ErmN|MLS|23S_rRNA_methyltransferases|ERMN	erm(N)_1_X97721
ARG-ANNOT	Bla|OKP-A-4|AM051142|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-4:AM051142:1-861:861
CARD	Bla|OKP-A-4|AM051142|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051142|0-861|ARO:3002421|OKP-A-4 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-4|AM051142|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655065|emb|AM051142.1|1-861
Resfinder	Bla|OKP-A-4|AM051142|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-4_1_AM051142
NCBI	1298|KM926622.1|KM926622|betalactams|Class_C_betalactamases|ACT	gi|752115662|gb|KM926622.1|1493-1724
ARG-ANNOT	1736|AY033516.1|AY033516|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-17:AY033516:2826-3711:876
CARD	1736|AY033516.1|AY033516|betalactams|Class_A_betalactamases|CTX	@phgb|AY033516|2835-3711|ARO:3001880|CTX-M-17 [Klebsiella pneumoniae]
Lahey	1736|AY033516.1|AY033516|betalactams|Class_A_betalactamases|CTX	AAK71471.1 AY033516.1:2836-3711
NCBI	1736|AY033516.1|AY033516|betalactams|Class_A_betalactamases|CTX	gi|16506517|gb|AY033516.1|2836-3711
Resfinder	1736|AY033516.1|AY033516|betalactams|Class_A_betalactamases|CTX	blaCTX-M-17_1_AY033516
ARG-ANNOT	1728|AY162283.2|AY162283|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-4:JN129451:1037-1867:831
CARD	1728|AY162283.2|AY162283|betalactams|Class_D_betalactamases|OXA	@phgb|JN129451|1036-1867|ARO:3001399|OXA-4 [Pseudomonas aeruginosa]
Lahey	1728|AY162283.2|AY162283|betalactams|Class_D_betalactamases|OXA	AAR12140.1 AY162283.2:1092-1922
NCBI	1728|AY162283.2|AY162283|betalactams|Class_D_betalactamases|OXA	gi|761589803|dbj|AP014651.1|327128-326298 gi|666688170|gb|KJ463833.1|21058-21888 gi|462078722|gb|KC310496.1|2115-2945 gi|355526407|gb|JN129451.1|1037-1867 gi|318066560|emb|FR771847.1|1453-2283 gi|300391780|gb|HM175874.1|868-1698 gi|300391780|gb|HM175874.1|55-174 gi|166178874|gb|EU380316.1|51-881 gi|38154309|gb|AY162283.2|1092-1922 gi|695211314|ref|NG_036058.1|1265-2095 gi|695211314|ref|NG_036058.1|452-571 gi|9454102|gb|AF227505.1|981-1811 gi|9454102|gb|AF227505.1|168-287
Resfinder	1728|AY162283.2|AY162283|betalactams|Class_D_betalactamases|OXA	blaOXA-4_1_AY162283
ARG-ANNOT	43|L20800.1|CLOTETP|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	(Tet)TetB-P:L20800:2309-4267:1959
CARD	43|L20800.1|CLOTETP|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	@phgb|L20800|2308-4267|ARO:3000195|tetB(P) [Clostridium perfringens]
NCBI	43|L20800.1|CLOTETP|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	gi|86450158|gb|DQ366035.1|1805-3763 gi|456030|gb|L20800.1|CLOTETP|2309-4267 gi|1845539|dbj|AB001076.1|1575-1720 gi|238481695|gb|FJ797650.1|5866-5911
Resfinder	43|L20800.1|CLOTETP|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	tetB(P)_3_NC_010937
ARG-ANNOT	Bla|cfiA13|FM200787|3-752|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA13:FM200787:3-752:750
NCBI	Bla|cfiA13|FM200787|3-752|750|betalactams|Class_B_betalactamases|CFIA	gi|238908269|emb|FM200790.1|162-911 gi|238908263|emb|FM200787.1|3-752 gi|238908261|emb|FM200786.1|1-737
Resfinder	Bla|cfiA13|FM200787|3-752|750|betalactams|Class_B_betalactamases|CFIA	cfiA13_1_FM200787
ARG-ANNOT	Bla|CMY-6|AJ011293|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-6:AJ011293:1-1146:1146
CARD	Bla|CMY-6|AJ011293|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AJ011293|0-1146|ARO:3002017|CMY-6 [Escherichia coli]
Lahey	Bla|CMY-6|AJ011293|1-1146|1146|betalactams|Class_C_betalactamases|CMY	CAB36902.1 AJ011293.1:1-1146
NCBI	Bla|CMY-6|AJ011293|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|760460086|gb|KJ802405.1|56970-58115 gi|678126661|gb|KJ802404.1|56970-58115 gi|756790415|gb|KJ588779.1|58108-59253 gi|591389235|gb|KF992018.1|58108-59253 gi|582035484|gb|CP006661.1|72203-73348 gi|430829327|gb|JF714412.2|58108-59253 gi|378705671|gb|JN861072.1|58108-59253 gi|358409925|gb|JN157804.1|2439-1294 gi|345105136|gb|JF503991.1|58108-59253 gi|4456088|emb|AJ011293.1|1-1146
Resfinder	Bla|CMY-6|AJ011293|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-6_1_AJ011293
CARD	CARD|pvgb|AL123456|410837-412760|ARO:3003448|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol-resistant_iniA|INIA|RequiresSNPConfirmation	@pvgb|AL123456|410837-412760|ARO:3003448|Mycobacterium tuberculosis iniA mutant conferring resistance to Ethambutol [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|410837-412760|ARO:3003448|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol-resistant_iniA|INIA|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|414027-415950 gi|984989958|gb|CP010339.1|413808-415731 gi|984981517|gb|CP010337.1|413897-415820 gi|984976917|gb|CP010336.1|409010-410933 gi|984972452|gb|CP010335.1|410548-412471 gi|984950177|gb|CP010330.1|410803-412726 gi|984945858|gb|CP010329.1|410801-412724 gi|923105817|gb|CP012506.1|405116-407039 gi|918453982|gb|CP012090.1|409148-411071 gi|769537622|gb|CP010873.1|409129-411052
NCBI	gi|21464495|gb|AY101764.1|betalactams|Class_A_betalactamases|TEM	gi|21464495|gb|AY101764.1|1-1072
NCBI	Flq|norA_1_M97169|Fluoroquinolones|Quinolone_active_efflux|NORA	gi|295163|gb|M80252.1|STANORA11|473-1639 gi|153054|gb|M97169.1|STANORAX|246-1412
Resfinder	Flq|norA_1_M97169|Fluoroquinolones|Quinolone_active_efflux|NORA	norA_1_M97169
ARG-ANNOT	314|AF155139.2|AF155139|Glycopeptides|VanC-type_regulator|VANRC	(Gly)VanR-F:AF155139:1512-2207:696
CARD	314|AF155139.2|AF155139|Glycopeptides|VanC-type_regulator|VANRC	@phgb|AF155139|1511-2207|ARO:3002925|vanRF [Paenibacillus popilliae ATCC 14706]
NCBI	314|AF155139.2|AF155139|Glycopeptides|VanC-type_regulator|VANRC	gi|40363824|gb|AF155139.2|1512-2207 gi|33312477|gb|AF432143.1|288-983 gi|961442200|gb|CP013652.1|4428349-4428314
Resfinder	314|AF155139.2|AF155139|Glycopeptides|VanC-type_regulator|VANRC	VanR-F_1_AF155139
NCBI	Sul|AE016830.1|gene3181|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|29350190|gb|AE016830.1|3141537-3140746
ARG-ANNOT	Rif|Arr7|FN397623|1189-1641|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	(Rif)Arr7:FN397623:1189-1641:453
CARD	Rif|Arr7|FN397623|1189-1641|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	@phgb|FN397623|1188-1641|ARO:3002852|arr-7 [Pseudomonas aeruginosa]
NCBI	Rif|Arr7|FN397623|1189-1641|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|242322372|emb|FN397623.1|1189-1641
Resfinder	Rif|Arr7|FN397623|1189-1641|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	ARR-7_1_FN397623
CARD	CARD|phgb|NC_010410|1255006-1256458|ARO:3000779|adeH|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEH	@phgb|NC_010410|1255006-1256458|ARO:3000779|adeH [Acinetobacter baumannii AYE]
NCBI	CARD|phgb|NC_010410|1255006-1256458|ARO:3000779|adeH|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEH	gi|939559781|gb|CP012952.1|1380380-1381832 gi|787858845|gb|CP008706.1|1345301-1346753 gi|751410783|gb|CP010781.1|2616169-2614717 gi|213985689|gb|CP001172.1|1238614-1240066 gi|213054530|gb|CP001182.1|2754725-2753273 gi|169147133|emb|CU459141.1|1255007-1256459 gi|88758827|emb|CT025802.2|1452-1
NCBI	Bla|Z_35_AJ302698|betalactams|Class_A_betalactamases|BLAZ	gi|941149152|gb|CP007679.1|21373-20528 gi|929861413|gb|CP010403.1|4334-3489 gi|841332193|emb|LN866850.1|16106-16951 gi|748807120|gb|CP010526.1|1459959-1459114 gi|443426804|gb|CP003673.1|417-1262 gi|260066083|gb|GQ900381.1|30227-31072 gi|35186899|gb|AY373761.1|16916-16071 gi|695200772|ref|NG_036177.1|2064-2909 gi|57635977|gb|CP000028.1|1699-2544 gi|341312|gb|M25257.1|STALACBAF|984-139
Resfinder	Bla|Z_35_AJ302698|betalactams|Class_A_betalactamases|BLAZ	blaZ_35_AJ302698
CARD	CARD|phgb|M80674|877-2494|ARO:3003554|tcmA|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TCMA	@phgb|M80674|877-2494|ARO:3003554|tcmA [Streptomyces glaucescens]
NCBI	CARD|phgb|M80674|877-2494|ARO:3003554|tcmA|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TCMA	gi|692319829|gb|CP009438.1|6006155-6007771 gi|153488|gb|M80674.1|STMTCREP|878-2494
ARG-ANNOT	Bla|CTX-M-26|AY157676|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-26:AY157676:1-876:876
CARD	Bla|CTX-M-26|AY157676|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY157676|0-876|ARO:3001888|CTX-M-26 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-26|AY157676|1-876|876|betalactams|Class_A_betalactamases|CTX	AAN75444.1 AY157676.1:1-876
NCBI	Bla|CTX-M-26|AY157676|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|38373216|gb|AY455830.1|1615-2490 gi|26000704|gb|AY157676.1|1-876
Resfinder	Bla|CTX-M-26|AY157676|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-26_1_AY455830
NCBI	Flq|NC_003112.2.904301|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|744797373|gb|CP006869.1|1925957-1923654 gi|325199235|gb|CP002420.1|666028-663725 gi|66731897|gb|AE002098.2|1665175-1667478
ARG-ANNOT	gi|10641069|dbj|AB049569.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-91:AB049569:1-861:861
CARD	gi|10641069|dbj|AB049569.1|betalactams|Class_A_betalactamases|TEM	@phgb|AB049569|0-861|ARO:3000958|TEM-91 [Escherichia coli]
Lahey	gi|10641069|dbj|AB049569.1|betalactams|Class_A_betalactamases|TEM	BAB16308.1 AB049569.1:1-861
NCBI	gi|10641069|dbj|AB049569.1|betalactams|Class_A_betalactamases|TEM	gi|10641069|dbj|AB049569.1|1-861
Resfinder	gi|10641069|dbj|AB049569.1|betalactams|Class_A_betalactamases|TEM	blaTEM-91_1_AB049569
ARG-ANNOT	Bla|DHA-5|JF273491|745-1885|1140|betalactams|Class_C_betalactamases|DHA	(Bla)DHA-5:JF273491:745-1885:1140
CARD	Bla|DHA-5|JF273491|745-1885|1140|betalactams|Class_C_betalactamases|DHA	@phgb|JF273491|745-1885|ARO:3002138|DHA-5 [Morganella morganii]
Lahey	Bla|DHA-5|JF273491|745-1885|1140|betalactams|Class_C_betalactamases|DHA	AEL22919.1 JF273491.1:746-1885
NCBI	Bla|DHA-5|JF273491|745-1885|1140|betalactams|Class_C_betalactamases|DHA	gi|342325649|gb|JF273491.1|746-1885
Resfinder	Bla|DHA-5|JF273491|745-1885|1140|betalactams|Class_C_betalactamases|DHA	blaDHA-5_1_JF273491
CARD	CARD|phgb|JF802084|1592-2165|ARO:3002969|vanXYN|Glycopeptides|VanN-type_resistance_protein|VANXYN	@phgb|JF802084|1592-2165|ARO:3002969|vanXYN [Enterococcus faecium]
NCBI	CARD|phgb|JF802084|1592-2165|ARO:3002969|vanXYN|Glycopeptides|VanN-type_resistance_protein|VANXYN	gi|507722025|gb|JF802084.2|1593-2166 gi|425702999|dbj|AB701345.1|4442-5015
CARD	Bla|KF057032.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KF057032|0-825|ARO:3001686|OXA-315 [Acinetobacter baumannii]
Lahey	Bla|KF057032.1|gene1|betalactams|Class_D_betalactamases|OXA	AGU69253.1 KF057032.1:1-825
NCBI	Bla|KF057032.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|537430804|gb|KF057032.1|1-825
ARG-ANNOT	Bla|OXA-173|HM113559|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-173:HM113559:1-825:825
CARD	Bla|OXA-173|HM113559|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HM113559|0-825|ARO:3001657|OXA-173 [Acinetobacter baumannii]
Lahey	Bla|OXA-173|HM113559|1-825|825|betalactams|Class_D_betalactamases|OXA	ADI58617.1 HM113559.1:1-825
NCBI	Bla|OXA-173|HM113559|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|298113021|gb|HM113559.1|1-825
Resfinder	Bla|OXA-173|HM113559|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-173_1_HM113559
NCBI	AGly|AF047556.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|184216053|gb|EU622037.1|203-764 gi|695198413|ref|NG_034972.1|117-678
ARG-ANNOT	gi|76008227|gb|AY780674.2|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-18:AB587676:1366-2106:741
Lahey	gi|76008227|gb|AY780674.2|betalactams|Class_B_betalactamases|IMP	AAV49162.2 AY780674.2:1-741
NCBI	gi|76008227|gb|AY780674.2|betalactams|Class_B_betalactamases|IMP	gi|308026240|emb|FN556190.1|1601-2341 gi|307219171|dbj|AB587676.1|1366-2106 gi|299780310|gb|HM138673.1|413-1153 gi|134035513|gb|EF184215.1|483-1223 gi|76008227|gb|AY780674.2|1-741
Resfinder	gi|76008227|gb|AY780674.2|betalactams|Class_B_betalactamases|IMP	blaIMP-18_1_EF184215
CARD	CARD|phgb|AF427129|208-1069|ARO:3000950|TEM-83|betalactams|Class_A_betalactamases|TEM	@phgb|AF427129|208-1069|ARO:3000950|TEM-83 [Escherichia coli]
NCBI	CARD|phgb|AF427129|208-1069|ARO:3000950|TEM-83|betalactams|Class_A_betalactamases|TEM	gi|16798373|gb|AF427129.1|AF427129|209-1070
ARG-ANNOT	Bla|SHV-46|AY210887|112-972|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-46:AY210887:112-972:861
CARD	Bla|SHV-46|AY210887|112-972|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY210887|111-972|ARO:3001104|SHV-46 [Klebsiella oxytoca]
Lahey	Bla|SHV-46|AY210887|112-972|861|betalactams|Class_A_betalactamases|SHV	AAO53445.1 AY210887.1:112-972
NCBI	Bla|SHV-46|AY210887|112-972|861|betalactams|Class_A_betalactamases|SHV	gi|28912444|gb|AY210887.1|112-972
Resfinder	Bla|SHV-46|AY210887|112-972|861|betalactams|Class_A_betalactamases|SHV	blaSHV-46_1_AY210887
ARG-ANNOT	Bla|CEPA-85|U05887|556-1458|903|betalactams|Class_A_betalactamases|CEPA	(Bla)CEPA-85:U05887:556-1458:903;(Bla)CEPA-29:FR688019:1-903:903
NCBI	Bla|CEPA-85|U05887|556-1458|903|betalactams|Class_A_betalactamases|CEPA	gi|307075850|emb|FR688019.1|1-903 gi|60491031|emb|CR626927.1|1462026-1461124 gi|10048473|gb|U05888.2|BFU05888|5984-6886 gi|458309|gb|U05887.1|BFU05887|556-1458
Resfinder	Bla|CEPA-85|U05887|556-1458|903|betalactams|Class_A_betalactamases|CEPA	cepA_1_U05887
ARG-ANNOT	317|AF155139.2|AF155139|Glycopeptides|VanF-type_accessory_protein|VANZF	(Gly)VanZF-Pp:AF155139:4339-4959:621
CARD	317|AF155139.2|AF155139|Glycopeptides|VanF-type_accessory_protein|VANZF	@phgb|AF155139|4338-4959|ARO:3002963|vanZF [Paenibacillus popilliae ATCC 14706]
NCBI	317|AF155139.2|AF155139|Glycopeptides|VanF-type_accessory_protein|VANZF	gi|40363824|gb|AF155139.2|4339-4959
Resfinder	317|AF155139.2|AF155139|Glycopeptides|VanF-type_accessory_protein|VANZF	VanZ-F_1_AF155139
CARD	CARD|phgb|AB219523.1|21-1179|ARO:3003704|mexM|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXM	@phgb|AB219523.1|21-1179|ARO:3003704|mexM [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AB219523.1|21-1179|ARO:3003704|mexM|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXM	gi|68533162|dbj|AB219523.1|22-1179
CARD	CARD|phgb|NC_012469|1800927-1802391|ARO:3000616|mel|MLS|Macrolide_resistance_efflux_pumps|MEL	@phgb|NC_012469|1800927-1802391|ARO:3000616|mel [Streptococcus pneumoniae Taiwan19F-14]
NCBI	CARD|phgb|NC_012469|1800927-1802391|ARO:3000616|mel|MLS|Macrolide_resistance_efflux_pumps|MEL	gi|959991280|gb|CP013216.1|630998-629534 gi|909837468|gb|CP003357.2|1839117-1840581 gi|698841295|emb|LK020698.1|10506-9042 gi|697869830|gb|KJ545575.2|5373-6837 gi|649571968|emb|HG799503.1|18424-19888 gi|556027507|gb|CP006844.1|1761928-1763392 gi|321157379|emb|FR671415.1|18281-19745 gi|321157336|emb|FR671413.1|15433-16897 gi|298237097|gb|CP001993.1|2023615-2025079 gi|283440973|gb|CP001849.1|990104-988640
ARG-ANNOT	Phe|Cat-pC194|NC_002013|1260-1910|651|Phenicol|Chloramphenicol_acetyltransferases|CAT	(Phe)Cat-pC194:NC_002013:1260-1910:651;(Phe)CatA9:K01998:288-938:651
CARD	Phe|Cat-pC194|NC_002013|1260-1910|651|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|NC_002013|1259-1910|ARO:3002670|cat [Staphylococcus aureus]
NCBI	Phe|Cat-pC194|NC_002013|1260-1910|651|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|984658875|dbj|LC121520.1|1260-1910 gi|974161309|gb|CP012017.1|2485-1835 gi|974158393|gb|CP012016.1|2472-1822 gi|974155536|gb|CP012014.1|1273-623 gi|937564001|gb|KT362977.1|3510-4160 gi|937563996|gb|KT362976.1|2594-3244 gi|928241138|gb|KR072508.1|1980-2630 gi|922305614|gb|KP864661.1|9423-10073 gi|757399491|gb|KP245915.1|2691-3341 gi|757399481|gb|KP636798.1|3192-3842
Resfinder	Phe|Cat-pC194|NC_002013|1260-1910|651|Phenicol|Chloramphenicol_acetyltransferases|CAT	cat(pC194)_1_NC_002013
CARD	CARD|phgb|KP109679|2260-2974|ARO:3003715|PEDO-3|betalactams|Class_B_betalactamases|PEDO	@phgb|KP109679|2260-2974|ARO:3003715|PEDO-3 [Pedobacter sp. Stok-3]
NCBI	CARD|phgb|KP109679|2260-2974|ARO:3003715|PEDO-3|betalactams|Class_B_betalactamases|PEDO	gi|762020439|gb|KP109679.1|2261-2974
NCBI	gi|4557165|gb|AF104441.1|betalactams|Class_A_betalactamases|TEM	gi|4557165|gb|AF104441.1|1-1054
NCBI	gi|16798369|gb|AF427127.1|betalactams|Class_A_betalactamases|TEM	gi|16798369|gb|AF427127.1|AF427127|1-1103
CARD	CARD|pvgb|110645304|5576027-5577917|ARO:3003685|Pseudomonas|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|parE|RequiresSNPConfirmation	@pvgb|110645304|5576027-5577917|ARO:3003685|Pseudomonas aeruginosa parE conferring resistance to fluoroquinolones [Pseudomonas aeruginosa PAO1]
NCBI	CARD|pvgb|110645304|5576027-5577917|ARO:3003685|Pseudomonas|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|parE|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|5588090-5589979 gi|553895034|gb|CP006832.1|5576023-5577912 gi|553886202|gb|CP006831.1|5577108-5578997 gi|543879514|gb|CP006705.1|5355609-5357498 gi|110227054|gb|AE004091.2|5576028-5577917
ARG-ANNOT	Bla|CMY-69|JX049132|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-69:JX049132:1-1146:1146
CARD	Bla|CMY-69|JX049132|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JX049132|0-1146|ARO:3002082|CMY-69 [Escherichia coli]
Lahey	Bla|CMY-69|JX049132|1-1146|1146|betalactams|Class_C_betalactamases|CMY	AGE45504.1 JX049132.1:1-1146
NCBI	Bla|CMY-69|JX049132|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|448819159|gb|JX049132.1|1-1146
Resfinder	Bla|CMY-69|JX049132|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-69_1_JX049132
NCBI	1572|LC031883.1|LC031883|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|765098769|dbj|LC031883.1|6608-7162 gi|599206606|gb|KJ138219.1|999-1553
ARG-ANNOT	Bla|GOB-8|AY348327|1-873|873|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-8:AY348327:1-873:873
NCBI	Bla|GOB-8|AY348327|1-873|873|betalactams|Class_B_betalactamases|GOB	gi|33772773|gb|AY348327.1|1-873
Resfinder	Bla|GOB-8|AY348327|1-873|873|betalactams|Class_B_betalactamases|GOB	blaGOB-8_1_AY348327
ARG-ANNOT	Gly|VanC4|EU151752|29-1081|1053|Glycopeptides|VanC-type_resistance_protein|VANC	(Gly)VanC4:EU151752:29-1081:1053
NCBI	Gly|VanC4|EU151752|29-1081|1053|Glycopeptides|VanC-type_resistance_protein|VANC	gi|161779845|gb|EU151752.1|29-1081
Resfinder	Gly|VanC4|EU151752|29-1081|1053|Glycopeptides|VanC-type_resistance_protein|VANC	VanC_3_EU151752
CARD	CARD|phgb|X03615|231-1230|ARO:3002661|APH7-DPRIME-Ia|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH7-DPRIME	@phgb|X03615|231-1230|ARO:3002661|APH(7'')-Ia [Streptomyces hygroscopicus]
NCBI	CARD|phgb|X03615|231-1230|ARO:3002661|APH7-DPRIME-Ia|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH7-DPRIME	gi|551485344|gb|KF582041.1|1836-2835 gi|302749838|gb|GU459080.1|1514-2513 gi|302749834|gb|GU459079.1|4008-5007 gi|302749817|gb|GU459074.1|1011-12 gi|312306062|gb|HQ259114.1|1761-2760 gi|312306059|gb|HQ259113.1|2369-1370 gi|312306055|gb|HQ259112.1|3383-2384 gi|312306052|gb|HQ213785.1|2561-1562 gi|295986902|gb|HM002748.1|6764-5765 gi|124579467|gb|EF216316.1|5194-4195
ARG-ANNOT	Bla|TEM-114|AY589495|182-1042|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-114:AY589495:182-1042:861
CARD	Bla|TEM-114|AY589495|182-1042|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY589495|181-1042|ARO:3000977|TEM-114 [Enterobacter aerogenes]
Lahey	Bla|TEM-114|AY589495|182-1042|861|betalactams|Class_A_betalactamases|TEM	AAS89984.1 AY589495.1:182-1042
NCBI	Bla|TEM-114|AY589495|182-1042|861|betalactams|Class_A_betalactamases|TEM	gi|46370396|gb|AY589495.1|182-1042
Resfinder	Bla|TEM-114|AY589495|182-1042|861|betalactams|Class_A_betalactamases|TEM	blaTEM-114_1_AY589495
NCBI	gi|20198332|gb|AF347054.1|betalactams|Class_A_betalactamases|TEM	gi|20198332|gb|AF347054.1|1-1082
NCBI	gi|124365351|gb|EF219142.1|betalactams|Class_A_betalactamases|CTX	gi|124365351|gb|EF219142.1|1-889
ARG-ANNOT	gi|18652315|gb|AF468003.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-111:AF468003:1-861:861
CARD	gi|18652315|gb|AF468003.1|betalactams|Class_A_betalactamases|TEM	@phgb|AF468003|0-861|ARO:3000974|TEM-111 [Escherichia coli]
Lahey	gi|18652315|gb|AF468003.1|betalactams|Class_A_betalactamases|TEM	AAL77062.1 AF468003.1:1-861
NCBI	gi|18652315|gb|AF468003.1|betalactams|Class_A_betalactamases|TEM	gi|18652315|gb|AF468003.1|1-861
Resfinder	gi|18652315|gb|AF468003.1|betalactams|Class_A_betalactamases|TEM	blaTEM-111_1_AF468003
ARG-ANNOT	Bla|OXA-24|AJ239129|1-828|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-24:AJ239129:1-828:828;(Bla)OXA-33:AY082394:1-828:828;(Bla)OXA-40:AY228470:1266-2093:828
CARD	Bla|OXA-24|AJ239129|1-828|828|betalactams|Class_D_betalactamases|OXA	@phgb|AF509241|0-828|ARO:3001419|OXA-24 [Acinetobacter baumannii]
Lahey	Bla|OXA-24|AJ239129|1-828|828|betalactams|Class_D_betalactamases|OXA	AAM34291.1 AF509241.1:1-828
NCBI	Bla|OXA-24|AJ239129|1-828|828|betalactams|Class_D_betalactamases|OXA	gi|970567967|dbj|LC107422.1|2263-3090 gi|944549893|gb|KR922888.1|1-828 gi|641454190|gb|KJ534569.1|4366-5193 gi|641454179|gb|KJ534568.1|4364-5191 gi|695226512|ref|NG_041527.1|1827-2654 gi|695226504|ref|NG_041526.1|1793-2620 gi|357942638|gb|JN207494.1|4135-4962 gi|307128760|gb|GU199040.2|1196-2023 gi|283484487|gb|GQ904227.1|4425-5252 gi|283484478|gb|GQ904226.1|4167-4994
Resfinder	Bla|OXA-24|AJ239129|1-828|828|betalactams|Class_D_betalactamases|OXA	blaOXA-24_1_AJ239129
ARG-ANNOT	CARD|phgb|X63451|0-1653|ARO:3002828|srmB|MLS|Spiramycin_efflux_pumps|SRMB	(MLS)SrmB:X63451:558-2210:1653
CARD	CARD|phgb|X63451|0-1653|ARO:3002828|srmB|MLS|Spiramycin_efflux_pumps|SRMB	@phgb|X63451|0-1653|ARO:3002828|srmB [Streptomyces ambofaciens]
NCBI	CARD|phgb|X63451|0-1653|ARO:3002828|srmB|MLS|Spiramycin_efflux_pumps|SRMB	gi|917646380|gb|CP012382.1|5995360-5997012 gi|159232394|emb|AM709784.1|14386-12734 gi|46699|emb|X63451.1|558-2210
Resfinder	CARD|phgb|X63451|0-1653|ARO:3002828|srmB|MLS|Spiramycin_efflux_pumps|SRMB	srm(B)_1_X63451
CARD	95|GQ205627.2|GQ205627|MLS|Streptogramin_A_O-acetyltransferase|VATA	@phgb|GQ205627|3036-3687|ARO:3002845|vatH [Enterococcus faecium]
NCBI	95|GQ205627.2|GQ205627|MLS|Streptogramin_A_O-acetyltransferase|VATA	gi|262340498|gb|GQ205627.2|3037-3687
ARG-ANNOT	Bla|GES-13|GU169702|609-1472|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-13:GU169702:609-1472:864
CARD	Bla|GES-13|GU169702|609-1472|864|betalactams|Class_A_betalactamases|GES	@phgb|GU169702|608-1472|ARO:3002342|GES-13 [Pseudomonas aeruginosa]
Lahey	Bla|GES-13|GU169702|609-1472|864|betalactams|Class_A_betalactamases|GES	ACZ54536.1 GU169702.1:609-1472
NCBI	Bla|GES-13|GU169702|609-1472|864|betalactams|Class_A_betalactamases|GES	gi|269932038|gb|GU169702.1|609-1472
Resfinder	Bla|GES-13|GU169702|609-1472|864|betalactams|Class_A_betalactamases|GES	blaGES-13_1_GU169702
ARG-ANNOT	Bla|CTX-M-101|HQ398214|250-1125|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-101:HQ398214:250-1125:876
CARD	Bla|CTX-M-101|HQ398214|250-1125|876|betalactams|Class_A_betalactamases|CTX	@phgb|HQ398214|249-1125|ARO:3001960|CTX-M-101 [Escherichia coli]
Lahey	Bla|CTX-M-101|HQ398214|250-1125|876|betalactams|Class_A_betalactamases|CTX	ADY02545.1 HQ398214.1:250-1125
NCBI	Bla|CTX-M-101|HQ398214|250-1125|876|betalactams|Class_A_betalactamases|CTX	gi|588483402|gb|KJ125527.1|1-876 gi|323709060|gb|HQ398214.1|250-1125
Resfinder	Bla|CTX-M-101|HQ398214|250-1125|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-101_1_HQ398214
NCBI	Flq|QnrB27_2_HM439642|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224415|ref|NG_041069.1|1-645
Resfinder	Flq|QnrB27_2_HM439642|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB27_2_HM439642
NCBI	143|unknown_id|unknown_name|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|817922503|gb|CP011374.1|2161239-2160616 gi|817922503|gb|CP011374.1|2173104-2173055 gi|785798809|gb|CP011099.1|1616219-1615596 gi|785795794|gb|CP011098.1|1616196-1615573 gi|678222343|gb|KJ909292.1|5025-4402 gi|575453416|gb|CP006956.1|241452-242075 gi|575450852|gb|CP006955.1|2348060-2348683 gi|575450852|gb|CP006955.1|2371899-2372522 gi|575439963|gb|CP006942.1|974821-975444 gi|511255433|gb|KC734562.1|4226-3603 gi|511255399|gb|KC734561.1|3704-4327 gi|511255369|gb|KC734560.1|4326-3703
NCBI	Bla|NC_010558.1.6276043|betalactams|Class_A_betalactamases|TEM	gi|981191958|emb|LN999997.1|2513296-2512427 gi|975048878|gb|CP013962.1|4121694-4120825 gi|973715451|gb|CP013836.1|137754-138623 gi|973705327|gb|CP013832.1|76055-76924 gi|971339514|gb|CP006662.2|50816-51685 gi|943457735|gb|KT818627.1|33060-33929 gi|970338578|gb|KT725789.1|75453-76322 gi|970338460|gb|KT725788.1|80713-81582 gi|962148759|gb|KT002541.1|3901-4770 gi|961666360|gb|KT185451.1|17744-16875
CARD	AGly|AB114632.1|gene2|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AB114632|655-1453|ARO:3002607|aadA7 [Vibrio fluvialis]
NCBI	AGly|AB114632.1|gene2|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|38141871|dbj|AB114632.1|656-1453
NCBI	Bla|AY077485.2|gene1|betalactams|Class_A_betalactamases|OXY	gi|32130554|gb|AY077485.2|122-1056
CARD	Bla|cphA1_7_X57102|betalactams|Class_B_betalactamases|CPHA	@phgb|X57102|147-912|ARO:3003103|cphA7 [Aeromonas hydrophila]
NCBI	Bla|cphA1_7_X57102|betalactams|Class_B_betalactamases|CPHA	gi|38823|emb|X57102.1|148-912
Resfinder	Bla|cphA1_7_X57102|betalactams|Class_B_betalactamases|CPHA	cphA1_7_X57102
NCBI	Flq|CP003275.1|gene5239|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|451789617|gb|CP003720.1|5647670-5650264 gi|374096398|gb|CP003275.1|5953965-5956559
ARG-ANNOT	gi|147744336|gb|EF561644.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-28:EF561644:1-1146:1146
CARD	gi|147744336|gb|EF561644.1|betalactams|Class_C_betalactamases|CMY	@phgb|EF561644|0-1146|ARO:3002039|CMY-28 [Escherichia coli]
Lahey	gi|147744336|gb|EF561644.1|betalactams|Class_C_betalactamases|CMY	ABQ51091.1 EF561644.1:1-1146
NCBI	gi|147744336|gb|EF561644.1|betalactams|Class_C_betalactamases|CMY	gi|147744336|gb|EF561644.1|1-1146
Resfinder	gi|147744336|gb|EF561644.1|betalactams|Class_C_betalactamases|CMY	blaCMY-28_1_EF561644
ARG-ANNOT	gi|24415594|gb|AY144612.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-5:DQ023222:1316-2116:801
CARD	gi|24415594|gb|AY144612.1|betalactams|Class_B_betalactamases|VIM	@phgb|AY144612|0-801|ARO:3002275|VIM-5 [Klebsiella pneumoniae]
Lahey	gi|24415594|gb|AY144612.1|betalactams|Class_B_betalactamases|VIM	AAN52134.1 AY144612.1:1-801
NCBI	gi|24415594|gb|AY144612.1|betalactams|Class_B_betalactamases|VIM	gi|762041888|gb|KM589496.1|1268-2068 gi|459936647|gb|KC709652.1|123-923 gi|66277416|gb|DQ023222.1|1316-2116 gi|695211604|ref|NG_036092.1|1-801
Resfinder	gi|24415594|gb|AY144612.1|betalactams|Class_B_betalactamases|VIM	blaVIM-5_1_DQ023222
ARG-ANNOT	Bla|OKP-B-14|DQ149136|47-907|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-14:DQ149136::47-907:861
NCBI	Bla|OKP-B-14|DQ149136|47-907|861|betalactams|Class_A_betalactamases|OKP	gi|73665391|gb|DQ149136.1|47-907
ARG-ANNOT	Bla|FOX-7|AJ703796|1-1149|1149|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-7:AJ703796:1-1149:1149
CARD	Bla|FOX-7|AJ703796|1-1149|1149|betalactams|Class_C_betalactamases|FOX	@phgb|AJ703795|0-1149|ARO:3002160|FOX-7 [Klebsiella pneumoniae]
Lahey	Bla|FOX-7|AJ703796|1-1149|1149|betalactams|Class_C_betalactamases|FOX	CAG28256.1 AJ703795.1:1-1149
NCBI	Bla|FOX-7|AJ703796|1-1149|1149|betalactams|Class_C_betalactamases|FOX	gi|658132529|emb|HG934082.1|63364-64512 gi|62989704|emb|AJ703795.1|1-1149
Resfinder	Bla|FOX-7|AJ703796|1-1149|1149|betalactams|Class_C_betalactamases|FOX	blaFOX-7_1_AJ703796
ARG-ANNOT	CARD|phgb|AF462611|0-846|ARO:3000605|Erm36|MLS|23S_rRNA_methyltransferases|ERM	(MLS)Erm36:AF462611:186-1031:846
CARD	CARD|phgb|AF462611|0-846|ARO:3000605|Erm36|MLS|23S_rRNA_methyltransferases|ERM	@phgb|AF462611|0-846|ARO:3000605|Erm(36) [Micrococcus luteus]
NCBI	CARD|phgb|AF462611|0-846|ARO:3000605|Erm36|MLS|23S_rRNA_methyltransferases|ERM	gi|439915847|gb|KC005723.1|836-1681 gi|695208371|ref|NG_035538.1|186-1031 gi|699964714|dbj|AP014655.1|4543869-4543896
Resfinder	CARD|phgb|AF462611|0-846|ARO:3000605|Erm36|MLS|23S_rRNA_methyltransferases|ERM	erm(36)_1_AF462611
ARG-ANNOT	Bla|CMY-7|AJ011291|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-7:AJ011291:1-1146:1146
CARD	Bla|CMY-7|AJ011291|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AJ011291|0-1146|ARO:3002018|CMY-7 [Escherichia coli]
Lahey	Bla|CMY-7|AJ011291|1-1146|1146|betalactams|Class_C_betalactamases|CMY	CAB36900.1 AJ011291.1:1-1146
NCBI	Bla|CMY-7|AJ011291|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|695209802|ref|NG_035887.1|525-1670 gi|74099850|gb|DQ173300.1|1041-2186 gi|4456084|emb|AJ011291.1|1-1146
Resfinder	Bla|CMY-7|AJ011291|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-7_1_AY324388
NCBI	Flq|NC_007622.3794239|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|82655308|emb|AJ938182.1|7005-9665
ARG-ANNOT	Tmt|DfrK|FM207105|2788-3279|492|Trimethoprim|Dihydrofolate_reductase|DFRK	(Tmt)DfrK:FM207105:2788-3279:492
NCBI	Tmt|DfrK|FM207105|2788-3279|492|Trimethoprim|Dihydrofolate_reductase|DFRK	gi|961575543|gb|CP013629.1|3632-3141 gi|961575535|gb|CP013628.1|3363-2872 gi|555289332|emb|HG380319.1|8233-8724 gi|695224142|ref|NG_041022.1|9372-9863 gi|695226458|ref|NG_041521.1|10113-10604 gi|324604841|emb|FN677368.1|1864-2355 gi|295980134|emb|FN377602.2|7508-7999 gi|295807781|emb|FN390948.1|2919-3410 gi|695220792|ref|NG_039567.1|3622-3131 gi|228479243|emb|FM207105.1|2788-3279
Resfinder	Tmt|DfrK|FM207105|2788-3279|492|Trimethoprim|Dihydrofolate_reductase|DFRK	dfrK_1_FN377602
ARG-ANNOT	Bla|IMP-19|AB201265|1-741|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-19:AB201265:1-741:741
CARD	Bla|IMP-19|AB201265|1-741|741|betalactams|Class_B_betalactamases|IMP	@phgb|EF118171|3181-3922|ARO:3002210|IMP-19 [Aeromonas caviae]
Lahey	Bla|IMP-19|AB201265|1-741|741|betalactams|Class_B_betalactamases|IMP	ABM67078.1 EF118171.1:3182-3922
NCBI	Bla|IMP-19|AB201265|1-741|741|betalactams|Class_B_betalactamases|IMP	gi|667671722|gb|KF468750.1|729-1469 gi|667671718|gb|KF468749.1|72-812 gi|667671714|gb|KF468748.1|60-800 gi|667671711|gb|KF468747.1|729-1469 gi|667671708|gb|KF468746.1|729-1469 gi|667671704|gb|KF468745.1|1449-2189 gi|667671702|gb|KF468744.1|99-839 gi|667671697|gb|KF468743.1|99-839 gi|667671693|gb|KF468742.1|85-825 gi|451913584|gb|JX421697.1|2204-2944
Resfinder	Bla|IMP-19|AB201265|1-741|741|betalactams|Class_B_betalactamases|IMP	blaIMP-19_1_EF118171
NCBI	ACou|CP002695.1|gene1273|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|973420427|gb|CP010966.1|1312888-1314849 gi|973416827|gb|CP010965.1|2744756-2742795 gi|937412521|gb|CP011401.1|2736998-2735037 gi|937409066|gb|CP011400.1|1028271-1030232 gi|937404317|gb|CP011448.1|1312887-1314848 gi|937400854|gb|CP011447.1|1312897-1314858 gi|937393878|gb|CP011446.1|1311841-1313802 gi|937390412|gb|CP011445.1|1310789-1312750 gi|937386949|gb|CP011444.1|1311824-1313785 gi|937383491|gb|CP011443.1|2743721-2741760
CARD	Bla|OXA-257_1_KC567681|betalactams|Class_D_betalactamases|OXA	@phgb|KC567681|1210-2041|ARO:3001694|OXA-257 [Acinetobacter bereziniae]
Lahey	Bla|OXA-257_1_KC567681|betalactams|Class_D_betalactamases|OXA	AGK07370.1 KC567681.1:1211-2041
NCBI	Bla|OXA-257_1_KC567681|betalactams|Class_D_betalactamases|OXA	gi|482513939|gb|KC567681.1|1211-2041
Resfinder	Bla|OXA-257_1_KC567681|betalactams|Class_D_betalactamases|OXA	blaOXA-257_1_KC567681
NCBI	Rif|CP002695.1|gene18|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|973420427|gb|CP010966.1|11662-15774 gi|973416827|gb|CP010965.1|11662-15774 gi|937412521|gb|CP011401.1|11662-15774 gi|937409066|gb|CP011400.1|11662-15774 gi|937404317|gb|CP011448.1|11662-15774 gi|937400854|gb|CP011447.1|11662-15774 gi|937393878|gb|CP011446.1|11662-15774 gi|937390412|gb|CP011445.1|11662-15774 gi|937386949|gb|CP011444.1|11662-15774 gi|937383491|gb|CP011443.1|11662-15774
NCBI	Sul|CP002695.1|gene1085|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|973420427|gb|CP010966.1|1110748-1109906 gi|973416827|gb|CP010965.1|2947944-2948786 gi|937412521|gb|CP011401.1|2941237-2942079 gi|937409066|gb|CP011400.1|826129-825287 gi|937404317|gb|CP011448.1|1109694-1108852 gi|937400854|gb|CP011447.1|1109703-1108861 gi|937393878|gb|CP011446.1|1108655-1107813 gi|937390412|gb|CP011445.1|1108651-1107809 gi|937386949|gb|CP011444.1|1108637-1107795 gi|937383491|gb|CP011443.1|2945859-2946701
CARD	CARD|pvgb|CP003583|913745-914813|ARO:3003079|Enterococcus|Lipopeptides|Daptomycin-resistant_liaFSR|LIAFSR|RequiresSNPConfirmation	@pvgb|CP003583|913745-914813|ARO:3003079|Enterococcus faecium liaS mutant conferring daptomycin resistance [Enterococcus faecium DO]
NCBI	CARD|pvgb|CP003583|913745-914813|ARO:3003079|Enterococcus|Lipopeptides|Daptomycin-resistant_liaFSR|LIAFSR|RequiresSNPConfirmation	gi|974999704|gb|CP013994.1|1819560-1818492 gi|529202214|gb|CP006620.1|967588-968656 gi|388532432|gb|CP003583.1|913746-914814 gi|378937014|gb|CP003351.1|1402334-1401266
NCBI	Rif|NC_002516.2.881699|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|735219-739292 gi|553895034|gb|CP006832.1|4780612-4776539 gi|553886202|gb|CP006831.1|4781697-4777624 gi|543879514|gb|CP006705.1|4560200-4556127 gi|110227054|gb|AE004091.2|4780617-4776544
ARG-ANNOT	Bla|TEM-108|AF506748|39-899|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-108:AF506748:39-899:861
CARD	Bla|TEM-108|AF506748|39-899|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF506748|38-899|ARO:3000971|TEM-108 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	Bla|TEM-108|AF506748|39-899|861|betalactams|Class_A_betalactamases|TEM	AAM28884.1 AF506748.1:39-899
NCBI	Bla|TEM-108|AF506748|39-899|861|betalactams|Class_A_betalactamases|TEM	gi|20805893|gb|AF506748.1|39-899 gi|45332239|gb|AY524415.2|39-899
Resfinder	Bla|TEM-108|AF506748|39-899|861|betalactams|Class_A_betalactamases|TEM	blaTEM-108_1_AF506748
NCBI	Sul|sul1_19_DQ125241|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|87295500|gb|DQ125241.2|3549-4388 gi|974751547|gb|KU130294.1|233473-234001 gi|982189197|gb|CP013993.1|5430539-5431065
Resfinder	Sul|sul1_19_DQ125241|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_19_DQ125241
NCBI	gi|60359799|dbj|AB205197.1|betalactams|Class_A_betalactamases|CTX	gi|189304726|gb|EU660216.1|46-921 gi|60359799|dbj|AB205197.1|1-876
NCBI	523|AM709783.1|AM709783|Multi-drug_resistance|Multi-drug_efflux_pumps|DRRA	gi|917646380|gb|CP012382.1|6061034-6060153 gi|159232381|emb|AM709783.1|1007-1888
ARG-ANNOT	826|U72743.1|MSU72743|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	(AGly)Aac2-Id):U72743:386-1018:533
CARD	826|U72743.1|MSU72743|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	@phgb|U72743|385-1018|ARO:3002526|AAC(2')-Id [Mycobacterium smegmatis str. MC2 155]
NCBI	826|U72743.1|MSU72743|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	gi|698956000|gb|CP009496.1|510850-510218 gi|698947717|gb|CP009495.1|510844-510212 gi|698938524|gb|CP009494.1|510844-510212 gi|399228992|gb|CP001663.1|512453-511821 gi|118168627|gb|CP000480.1|510841-510209 gi|1813570|gb|U72743.1|MSU72743|386-1018
Resfinder	826|U72743.1|MSU72743|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	aac(2')-Id_1_U72743
NCBI	Tet|tetS_3_X92946|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETS	gi|90811349|gb|DQ377340.1|2421-481 gi|2467210|emb|X92946.1|26034-27974 gi|388785684|gb|JQ762256.1|3410-3381
Resfinder	Tet|tetS_3_X92946|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETS	tet(S)_3_X92946
ARG-ANNOT	Bla|TEM-122|AY307100|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-122:AY307100:1-861:861
CARD	Bla|TEM-122|AY307100|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY307100|0-861|ARO:3000984|TEM-122 [Escherichia coli]
Lahey	Bla|TEM-122|AY307100|1-861|861|betalactams|Class_A_betalactamases|TEM	AAQ98890.1 AY307100.1:1-861
NCBI	Bla|TEM-122|AY307100|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|37693754|gb|AY307100.1|1-861
Resfinder	Bla|TEM-122|AY307100|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-122_1_AY307100
NCBI	gi|56554770|gb|AY847147.1|betalactams|Class_A_betalactamases|CTX	gi|56554770|gb|AY847147.1|82-962
ARG-ANNOT	Bla|HERA-6|AJ536090|1-873|873|betalactams|Class_A_betalactamases|HERA	(Bla)HERA-6:AJ536090:1-873:873
NCBI	Bla|HERA-6|AJ536090|1-873|873|betalactams|Class_A_betalactamases|HERA	gi|27805135|emb|AJ536090.1|1-873
Resfinder	Bla|HERA-6|AJ536090|1-873|873|betalactams|Class_A_betalactamases|HERA	blaHERA-6_1_AJ536090
NCBI	Rif|NC_008702.1.4609796|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|119668705|emb|AM406670.1|3755815-3751682
NCBI	Mdr|U46859.1|gene22|Fosmidomycin|Multi-drug_resistance|Multi-drug_efflux_pumps|ROSB	gi|1197638|gb|U46859.1|YEU46859|24057-22366
ARG-ANNOT	Bla|TEM-134|AY574271|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-134:AY574271:1-861:861
CARD	Bla|TEM-134|AY574271|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY574271|0-861|ARO:3000998|TEM-134 [Citrobacter koseri]
Lahey	Bla|TEM-134|AY574271|1-861|861|betalactams|Class_A_betalactamases|TEM	AAS79107.1 AY574271.1:1-861
NCBI	Bla|TEM-134|AY574271|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|45925921|gb|AY574271.1|1-861
Resfinder	Bla|TEM-134|AY574271|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-134_1_AY574271
CARD	CARD|phgb|FJ872411|40765-41347|ARO:3002967|vanXYE|Glycopeptides|VanE-type_resistance_protein|VANXYE	@phgb|FJ872411|40765-41347|ARO:3002967|vanXYE [Enterococcus faecalis]
NCBI	CARD|phgb|FJ872411|40765-41347|ARO:3002967|vanXYE|Glycopeptides|VanE-type_resistance_protein|VANXYE	gi|229892433|gb|FJ872411.1|40766-41348
ARG-ANNOT	gi|90992729|gb|DQ445683.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-89:DQ445683:1-825:825
CARD	gi|90992729|gb|DQ445683.1|betalactams|Class_D_betalactamases|OXA	@phgb|DQ445683|0-825|ARO:3001625|OXA-89 [Acinetobacter baumannii]
Lahey	gi|90992729|gb|DQ445683.1|betalactams|Class_D_betalactamases|OXA	ABE03012.1 DQ445683.1:1-825
NCBI	gi|90992729|gb|DQ445683.1|betalactams|Class_D_betalactamases|OXA	gi|90992729|gb|DQ445683.1|1-825
Resfinder	gi|90992729|gb|DQ445683.1|betalactams|Class_D_betalactamases|OXA	blaOXA-89_2_DQ445683
NCBI	Bla|SHV-1_6_GU083599|betalactams|Class_A_betalactamases|SHV	gi|262212666|gb|GU083599.1|1-861
Resfinder	Bla|SHV-1_6_GU083599|betalactams|Class_A_betalactamases|SHV	blaSHV-1_6_GU083599
CARD	CARD|phgb|HQ833652|235-1111|ARO:3001963|CTX-M-104|betalactams|Class_A_betalactamases|CTX	@phgb|HQ833652|235-1111|ARO:3001963|CTX-M-104 [Escherichia coli]
NCBI	CARD|phgb|HQ833652|235-1111|ARO:3001963|CTX-M-104|betalactams|Class_A_betalactamases|CTX	gi|323709076|gb|HQ833652.1|236-1112 gi|282192945|gb|GU226840.1|1-876
NCBI	gi|494595013|gb|KC865667.1|betalactams|Class_A_betalactamases|TEM	gi|494595013|gb|KC865667.1|1-1111
NCBI	Rif|NC_009085.4918494|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|126385999|gb|CP000521.1|305681-309691
CARD	CARD|phgb|LC012596|4401-4767|ARO:3001205|bleomycin|Glycopeptides|Bleomycin_resistance_protein|BRP	@phgb|LC012596|4401-4767|ARO:3001205|bleomycin resistance protein (BRP) [Escherichia coli]
NCBI	CARD|phgb|LC012596|4401-4767|ARO:3001205|bleomycin|Glycopeptides|Bleomycin_resistance_protein|BRP	gi|974752094|gb|KT164809.1|2127-2493 gi|974752068|gb|KT164808.1|9150-9516 gi|975900971|gb|CP014006.1|11532-11898 gi|974570295|emb|LN997846.1|3255162-3254796 gi|971497742|gb|CP012903.1|22990-23356 gi|971497538|gb|CP012902.1|63197-63563 gi|970338578|gb|KT725789.1|80562-80928 gi|970338460|gb|KT725788.1|85822-86188 gi|959148293|gb|CP012990.1|16420-16054 gi|954665559|gb|KT879914.1|1875-2241
NCBI	1379|AF175293.1|AF175293|Glycopeptides|VanD-type_resistance_protein|VAND	gi|5759260|gb|AF175293.1|AF175293|4079-5110
Resfinder	1379|AF175293.1|AF175293|Glycopeptides|VanD-type_resistance_protein|VAND	VanD_2_AF175293
ARG-ANNOT	1345|GU045307.1|GU045307|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-26:GU045307:101-841:741
CARD	1345|GU045307.1|GU045307|betalactams|Class_B_betalactamases|IMP	@phgb|GU045307|100-841|ARO:3002217|IMP-26 [Pseudomonas aeruginosa]
Lahey	1345|GU045307.1|GU045307|betalactams|Class_B_betalactamases|IMP	ACY01749.1 GU045307.1:101-841
NCBI	1345|GU045307.1|GU045307|betalactams|Class_B_betalactamases|IMP	gi|921325527|dbj|LC075717.1|1273-2013 gi|410066874|gb|JX517203.1|1768-2508 gi|385277375|gb|JQ629930.1|489-1229 gi|315318901|gb|HQ685900.1|1-741 gi|261864919|gb|GU045307.1|101-841
Resfinder	1345|GU045307.1|GU045307|betalactams|Class_B_betalactamases|IMP	blaIMP-26_1_GU045307
CARD	CARD|phgb|FN543093|2365648-2366056|ARO:3000149|FosA|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	@phgb|FN543093|2365648-2366056|ARO:3000149|FosA [Cronobacter turicensis z3032]
NCBI	CARD|phgb|FN543093|2365648-2366056|ARO:3000149|FosA|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|323575285|emb|FN543093.2|2365649-2366057
CARD	gi|482869242|gb|KC818234.1|betalactams|Class_A_betalactamases|TEM	@phgb|KC818234|0-861|ARO:3001384|TEM-207 [Escherichia coli]
NCBI	gi|482869242|gb|KC818234.1|betalactams|Class_A_betalactamases|TEM	gi|482869242|gb|KC818234.1|1-862 gi|12018136|gb|AF308742.1|1-861
NCBI	1500|AY339625.2|AY339625|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|297787483|gb|GU585907.1|44348-43875 gi|695210321|ref|NG_035929.1|10420-10893 gi|695211797|ref|NG_036253.1|2384-2856 gi|6970049|gb|AF203818.1|85-557
NCBI	1070|AB777501.1|AB777501|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|459978576|dbj|AB777501.1|2292-2846 gi|974751547|gb|KU130294.1|207921-207368 gi|762041897|gb|KM589497.1|3859-4412 gi|723217933|gb|KM382183.1|734-1287 gi|697287983|dbj|AB715422.2|26596-27149 gi|672858205|gb|KF998105.1|4296-4849 gi|648296171|dbj|AB917040.2|102-655 gi|636632020|gb|KJ623741.1|734-1287 gi|636631997|gb|KJ575542.1|682-1235 gi|636631830|gb|KJ543560.1|681-1234
ARG-ANNOT	Bla|KPC-4|FJ473382|364-1245|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-4:FJ473382:364-1245:882
Lahey	Bla|KPC-4|FJ473382|364-1245|882|betalactams|Class_A_betalactamases|KPC	ACA34343.1 EU447304.1:15-896
NCBI	Bla|KPC-4|FJ473382|364-1245|882|betalactams|Class_A_betalactamases|KPC	gi|909893998|gb|CP012168.1|175557-174676 gi|902717325|gb|KR091915.1|29964-30845 gi|429201046|gb|JX193301.1|54274-55155 gi|392356698|gb|JQ837276.1|28044-28925 gi|218685693|gb|FJ473382.1|364-1245 gi|168830102|gb|EU447304.1|15-896 gi|51557251|gb|AY700571.1|1-881
Resfinder	Bla|KPC-4|FJ473382|364-1245|882|betalactams|Class_A_betalactamases|KPC	blaKPC-4_1_FJ473382
ARG-ANNOT	Bla|PER-5|FJ627180|1-927|927|betalactams|Class_A_betalactamases|PER	(Bla)PER-5:FJ627180:1-927:927
CARD	Bla|PER-5|FJ627180|1-927|927|betalactams|Class_A_betalactamases|PER	@phgb|FJ627180|0-926|ARO:3002367|PER-5 [Providencia rettgeri]
Lahey	Bla|PER-5|FJ627180|1-927|927|betalactams|Class_A_betalactamases|PER	ACN22483.1 FJ627180.1:1-926
NCBI	Bla|PER-5|FJ627180|1-927|927|betalactams|Class_A_betalactamases|PER	gi|223868932|gb|FJ627180.1|1-926
Resfinder	Bla|PER-5|FJ627180|1-927|927|betalactams|Class_A_betalactamases|PER	blaPER-5_1_FJ627180
NCBI	Phe|AF458080.1|gene3|Phenicol|Phenicol_efflux_pumps|CML	gi|765098769|dbj|LC031883.1|7518-8790 gi|364524682|gb|JN108884.1|915-2187 gi|335335057|gb|HQ634775.2|4055-5327 gi|330885969|gb|HQ880268.1|917-2189 gi|330885964|gb|HQ880266.1|923-2195 gi|330885950|gb|HQ880261.1|922-2194 gi|308826678|emb|FQ482074.1|78423-77151 gi|225217195|gb|FJ716798.1|889-2161 gi|27462652|gb|AF458080.1|1492-2764 gi|63147351|dbj|AB212941.1|949-2221
ARG-ANNOT	Bla|MAL-1|AJ277209|12-914|903|betalactams|Class_A_betalactamases|MAL	(Bla)MAL-1:AJ277209:12-914:903
NCBI	Bla|MAL-1|AJ277209|12-914|903|betalactams|Class_A_betalactamases|MAL	gi|13186083|emb|AJ277209.1|12-914
Resfinder	Bla|MAL-1|AJ277209|12-914|903|betalactams|Class_A_betalactamases|MAL	blaMAL-1_1_AJ277209
ARG-ANNOT	Bla|TEM-155|DQ679961|115-975|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-155:DQ679961:115-975:861
CARD	Bla|TEM-155|DQ679961|115-975|861|betalactams|Class_A_betalactamases|TEM	@phgb|DQ679961|114-975|ARO:3001021|TEM-155 [Proteus mirabilis]
Lahey	Bla|TEM-155|DQ679961|115-975|861|betalactams|Class_A_betalactamases|TEM	ABG77582.1 DQ679961.1:115-975
NCBI	Bla|TEM-155|DQ679961|115-975|861|betalactams|Class_A_betalactamases|TEM	gi|110610032|gb|DQ679961.1|115-975
Resfinder	Bla|TEM-155|DQ679961|115-975|861|betalactams|Class_A_betalactamases|TEM	blaTEM-155_1_DQ679961
CARD	gi|659497530|gb|KJ657570.1|betalactams|Class_D_betalactamases|OXA	@phgb|KJ657570|0-801|ARO:3001495|OXA-233 [Citrobacter freundii]
Lahey	gi|659497530|gb|KJ657570.1|betalactams|Class_D_betalactamases|OXA	AID67109.1 KJ657570.1:1-801
NCBI	gi|659497530|gb|KJ657570.1|betalactams|Class_D_betalactamases|OXA	gi|659497530|gb|KJ657570.1|1-801
NCBI	Mdr|NC_002951.3238285|Multi-drug_resistance|MDR_regulator|ARLS	gi|974161314|gb|CP012018.1|1532780-1531425 gi|974158397|gb|CP012015.1|1533516-1532161 gi|974155539|gb|CP012013.1|1534429-1533074 gi|974152716|gb|CP012012.1|1526310-1524955 gi|974149849|gb|CP012011.1|1582264-1580909 gi|941146344|gb|CP007676.1|1425660-1424305 gi|941142962|gb|CP007672.1|1424049-1422694 gi|941139768|gb|CP007657.1|1437761-1436406 gi|899750970|gb|CP012120.1|2366476-2367831 gi|828461663|gb|CP007674.1|1420915-1419560
CARD	CARD|phgb|NC_009725|543798-544848|ARO:3002814|clbA|Phenicol|Phenicol_23S_rRNA_methyltransferases|CLBA	@phgb|NC_009725|543798-544848|ARO:3002814|clbA [Bacillus amyloliquefaciens subsp. plantarum str. FZB42]
NCBI	CARD|phgb|NC_009725|543798-544848|ARO:3002814|clbA|Phenicol|Phenicol_23S_rRNA_methyltransferases|CLBA	gi|556017688|gb|CP006845.1|539696-540746 gi|154350369|gb|CP000560.1|543799-544849
NCBI	Bla|cphA1_2_AY261377|betalactams|Class_B_betalactamases|CPHA	gi|33150465|gb|AY261377.1|1-765
Resfinder	Bla|cphA1_2_AY261377|betalactams|Class_B_betalactamases|CPHA	cphA1_2_AY261377
ARG-ANNOT	319|AF155139.2|AF155139|Glycopeptides|VanA-type_resistance_protein|VANA	(Gly)VanAE-Pp:AF155139:5940-6971:1032
CARD	319|AF155139.2|AF155139|Glycopeptides|VanA-type_resistance_protein|VANA	@phgb|AF155139|5939-6971|ARO:3002908|vanF [Paenibacillus popilliae ATCC 14706]
NCBI	319|AF155139.2|AF155139|Glycopeptides|VanA-type_resistance_protein|VANA	gi|40363824|gb|AF155139.2|5940-6971 gi|284517203|gb|GU299525.1|1-199
Resfinder	319|AF155139.2|AF155139|Glycopeptides|VanA-type_resistance_protein|VANA	VanE_1_AF155139
NCBI	Tmt|tetQ_2_X58717|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	gi|686511930|gb|CP006828.1|2131472-2133397 gi|807867|emb|X58717.1|586-2511
Resfinder	Tmt|tetQ_2_X58717|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	tet(Q)_2_X58717
ARG-ANNOT	944|X74948.1|X74948|Phenicol|Chloramphenicol_acetyltransferases|CATP	(Phe)CatS:X74948:1-492:492
CARD	944|X74948.1|X74948|Phenicol|Chloramphenicol_acetyltransferases|CATP	@phgb|X74948|0-492|ARO:3002688|catS [Streptococcus pyogenes]
NCBI	944|X74948.1|X74948|Phenicol|Chloramphenicol_acetyltransferases|CATP	gi|402659|emb|X74948.1|1-492
Resfinder	944|X74948.1|X74948|Phenicol|Chloramphenicol_acetyltransferases|CATP	catS_1_X74948
NCBI	Bla|SHV-11_14_DQ219474|betalactams|Class_A_betalactamases|SHV	gi|77702547|gb|DQ219474.1|1-861
Resfinder	Bla|SHV-11_14_DQ219474|betalactams|Class_A_betalactamases|SHV	blaSHV-11_14_DQ219474
ARG-ANNOT	Tet|TetX|M37699|586-1752|1167|Tetracyclines|Tetracycline_inactivation_enzymes|TETX	(Tet)TetX:M37699:586-1752:1167
CARD	Tet|TetX|M37699|586-1752|1167|Tetracyclines|Tetracycline_inactivation_enzymes|TETX	@phgb|M37699|585-1752|ARO:3000205|tetX [Bacteroides fragilis]
NCBI	Tet|TetX|M37699|586-1752|1167|Tetracyclines|Tetracycline_inactivation_enzymes|TETX	gi|194716529|gb|EU864422.1|9542-8376 gi|155021|gb|M37699.1|TRNTETX|586-1752 gi|874268592|gb|CP007503.1|1983106-1983179 gi|859808409|gb|KP265722.1|27459-27386
Resfinder	Tet|TetX|M37699|586-1752|1167|Tetracyclines|Tetracycline_inactivation_enzymes|TETX	tet(X)_2_M37699
CARD	Phe|EF660562.1|gene3|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	@phgb|EF660562|949-1582|ARO:3002676|catB3 [Pseudomonas aeruginosa]
NCBI	Phe|EF660562.1|gene3|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|157272127|gb|EF660562.1|950-1582
ARG-ANNOT	MLS|ErmV|U59450|397-1176|780|MLS|23S_rRNA_methyltransferases|ERMV	(MLS)ErmV:U59450:397-1176:780
CARD	MLS|ErmV|U59450|397-1176|780|MLS|23S_rRNA_methyltransferases|ERMV	@phgb|U59450|396-1176|ARO:3002824|ErmV [Streptomyces viridochromogenes]
NCBI	MLS|ErmV|U59450|397-1176|780|MLS|23S_rRNA_methyltransferases|ERMV	gi|1927193|gb|U59450.1|SVU59450|397-1176
CARD	CARD|phgb|AJ884726|539-1325|ARO:3002614|aadA14|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AJ884726|539-1325|ARO:3002614|aadA14 [Pasteurella multocida]
NCBI	CARD|phgb|AJ884726|539-1325|ARO:3002614|aadA14|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|60219174|emb|AJ884726.1|540-1326
ARG-ANNOT	gi|10566736|dbj|AB040994.1|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-6:AB616660:1813-2553:741
CARD	gi|10566736|dbj|AB040994.1|betalactams|Class_B_betalactamases|IMP	@phgb|AB040994|0-741|ARO:3002197|IMP-6 [Serratia marcescens]
Lahey	gi|10566736|dbj|AB040994.1|betalactams|Class_B_betalactamases|IMP	BAB15941.1 AB040994.1:1-741
NCBI	gi|10566736|dbj|AB040994.1|betalactams|Class_B_betalactamases|IMP	gi|575771395|dbj|AB901041.1|55-795 gi|549442311|gb|KF512018.1|471-1211 gi|549442305|gb|KF512017.1|471-1211 gi|528746505|gb|KC960557.1|471-1211 gi|695214733|ref|NG_036899.1|5191-5931 gi|384873003|gb|JQ764729.1|98-838 gi|695212924|ref|NG_036518.1|657-1397 gi|51555859|dbj|AB188812.1|580-1320 gi|10566736|dbj|AB040994.1|1-741
Resfinder	gi|10566736|dbj|AB040994.1|betalactams|Class_B_betalactamases|IMP	blaIMP-6_1_AB188812
CARD	Flq|QnrB59_1_JX259320|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JX259320|0-681|ARO:3002772|QnrB59 [Citrobacter freundii]
NCBI	Flq|QnrB59_1_JX259320|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|404386040|gb|JX259320.1|1-681
Resfinder	Flq|QnrB59_1_JX259320|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB59_1_JX259320
NCBI	Bla|SHV-5_4_AY386369|betalactams|Class_A_betalactamases|SHV	gi|695210230|ref|NG_035916.1|1-861 gi|2113856|emb|X98103.1|74-934
Resfinder	Bla|SHV-5_4_AY386369|betalactams|Class_A_betalactamases|SHV	blaSHV-5_4_AY386369
ARG-ANNOT	gi|14276852|gb|AF326355.1|betalactams|Class_A_betalactamases|GES	(Bla)GES-2:AF326355:1-864:864
CARD	gi|14276852|gb|AF326355.1|betalactams|Class_A_betalactamases|GES	@phgb|AF326355|0-864|ARO:3002331|GES-2 [Pseudomonas aeruginosa]
Lahey	gi|14276852|gb|AF326355.1|betalactams|Class_A_betalactamases|GES	AAK58421.1 AF326355.1:1-864
NCBI	gi|14276852|gb|AF326355.1|betalactams|Class_A_betalactamases|GES	gi|14276852|gb|AF326355.1|AF326355|1-864 gi|19919175|gb|AF347074.1|667-1530
Resfinder	gi|14276852|gb|AF326355.1|betalactams|Class_A_betalactamases|GES	blaGES-2_1_AF326355
CARD	CARD|pvgb|NC_017174|109609-110803|ARO:3003357|Clostridium|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|NC_017174|109609-110803|ARO:3003357|Clostridium difficile EF-Tu mutants conferring resistance to elfamycin [Clostridium difficile]
NCBI	CARD|pvgb|NC_017174|109609-110803|ARO:3003357|Clostridium|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|291482100|emb|FN665653.1|109610-110803 gi|291482254|emb|FN668944.1|77074-77287 gi|291482254|emb|FN668944.1|77388-77537
NCBI	Flq|CP000768.1|gene728|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|152938384|gb|CP000768.1|685775-688363
ARG-ANNOT	Bla|HERA-1|AF311385|1-873|873|betalactams|Class_A_betalactamases|HERA	(Bla)HERA-1:AF311385:1-873:873;(Bla)HERA-7:AJ536091:1-873:873
NCBI	Bla|HERA-1|AF311385|1-873|873|betalactams|Class_A_betalactamases|HERA	gi|16588421|gb|AF311385.1|1-873 gi|222143568|dbj|AB479111.1|1-863
Resfinder	Bla|HERA-1|AF311385|1-873|873|betalactams|Class_A_betalactamases|HERA	blaHERA-1_1_AF311385
ARG-ANNOT	Bla|SHV-78|FJ685658|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-78:FJ685658:1-861:861
CARD	Bla|SHV-78|FJ685658|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176553|30-891|ARO:3001132|SHV-78 [Klebsiella pneumoniae]
Lahey	Bla|SHV-78|FJ685658|1-861|861|betalactams|Class_A_betalactamases|SHV	CAJ47133.2 AM176553.2:31-891
NCBI	Bla|SHV-78|FJ685658|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|225697594|gb|FJ685658.1|1-861 gi|160948450|emb|AM176553.2|31-891
Resfinder	Bla|SHV-78|FJ685658|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-78_1_AM176553
CARD	CARD|phgb|FJ872411|41336-43445|ARO:3002971|vanTE|Glycopeptides|VanE-type_resistance_protein|VANTE	@phgb|FJ872411|41336-43445|ARO:3002971|vanTE [Enterococcus faecalis]
NCBI	CARD|phgb|FJ872411|41336-43445|ARO:3002971|vanTE|Glycopeptides|VanE-type_resistance_protein|VANTE	gi|229892433|gb|FJ872411.1|41337-43446
CARD	CARD|phgb|NC_002516.2|4904646-4907703|ARO:3003031|mexW|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXW	@phgb|NC_002516.2|4904646-4907703|ARO:3003031|mexW [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516.2|4904646-4907703|ARO:3003031|mexW|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXW	gi|926451317|emb|LN871187.1|4904641-4907697 gi|553895034|gb|CP006832.1|4904642-4907698 gi|553886202|gb|CP006831.1|4905727-4908783 gi|543879514|gb|CP006705.1|4684231-4687287 gi|110227054|gb|AE004091.2|4904647-4907703
ARG-ANNOT	Bla|OKP-B-11|AM051161|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-11:AM051161:1-861:861
CARD	Bla|OKP-B-11|AM051161|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051161|0-861|ARO:3002444|OKP-B-11 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-11|AM051161|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655101|emb|AM051161.1|1-861
Resfinder	Bla|OKP-B-11|AM051161|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-11_1_AM051161
NCBI	gi|407731526|gb|JX440353.1|betalactams|Class_C_betalactamases|CMY	gi|407731526|gb|JX440353.1|1027-2255
ARG-ANNOT	gi|160369827|gb|EU188842.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-114:EU188842:1-828:828
CARD	gi|160369827|gb|EU188842.1|betalactams|Class_D_betalactamases|OXA	@phgb|EU188842|0-828|ARO:3001609|OXA-114a [Achromobacter xylosoxidans]
Lahey	gi|160369827|gb|EU188842.1|betalactams|Class_D_betalactamases|OXA	ABX38721.1 EU188842.1:1-828
NCBI	gi|160369827|gb|EU188842.1|betalactams|Class_D_betalactamases|OXA	gi|160369827|gb|EU188842.1|1-828
ARG-ANNOT	gi|121485910|gb|EF136376.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-159:EF136376:1-861:861
CARD	gi|121485910|gb|EF136376.1|betalactams|Class_A_betalactamases|TEM	@phgb|EF136376|0-861|ARO:3001025|TEM-159 [Proteus mirabilis]
Lahey	gi|121485910|gb|EF136376.1|betalactams|Class_A_betalactamases|TEM	ABM54869.1 EF136376.1:1-861
NCBI	gi|121485910|gb|EF136376.1|betalactams|Class_A_betalactamases|TEM	gi|121485910|gb|EF136376.1|1-861
Resfinder	gi|121485910|gb|EF136376.1|betalactams|Class_A_betalactamases|TEM	blaTEM-159_1_EF136376
ARG-ANNOT	Tmt|DfrA19|AJ310778|7004-7573|570|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	(Tmt)DfrA19:AJ310778:7004-7573:570
CARD	Tmt|DfrA19|AJ310778|7004-7573|570|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	@phgb|AJ310778|7003-7573|ARO:3003015|dfrA19 [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	Tmt|DfrA19|AJ310778|7004-7573|570|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695211993|ref|NG_036308.1|13328-13897 gi|695208285|ref|NG_035514.1|7004-7573 gi|89330179|emb|AM234698.1|11860-12429
Resfinder	Tmt|DfrA19|AJ310778|7004-7573|570|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	dfrA18_1_AJ310778
ARG-ANNOT	Bla|TEM-60|AF047171|136-996|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-60:AF047171:136-996:861
CARD	Bla|TEM-60|AF047171|136-996|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF047171|135-996|ARO:3000929|TEM-60 [Providencia stuartii]
Lahey	Bla|TEM-60|AF047171|136-996|861|betalactams|Class_A_betalactamases|TEM	AAC05975.1 AF047171.1:136-996
NCBI	Bla|TEM-60|AF047171|136-996|861|betalactams|Class_A_betalactamases|TEM	gi|695198329|ref|NG_034953.1|136-996
Resfinder	Bla|TEM-60|AF047171|136-996|861|betalactams|Class_A_betalactamases|TEM	blaTEM-60_1_AF047171
CARD	CARD|phgb|Z50108|238-1768|ARO:3003026|fusH|Fusidic_acid|Fusidic_acid_esterases|FUSH	@phgb|Z50108|238-1768|ARO:3003026|fusH [Streptomyces lividans]
NCBI	CARD|phgb|Z50108|238-1768|ARO:3003026|fusH|Fusidic_acid|Fusidic_acid_esterases|FUSH	gi|908886|emb|Z50108.1|239-1769
CARD	CARD|phgb|AY847148|8-884|ARO:3001933|CTX-M-72|betalactams|Class_A_betalactamases|CTX	@phgb|AY847148|8-884|ARO:3001933|CTX-M-72 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AY847148|8-884|ARO:3001933|CTX-M-72|betalactams|Class_A_betalactamases|CTX	gi|695211160|ref|NG_036029.1|9-885
CARD	Tet|tetB_3_AP000342|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	@phgb|NC_020418|458865-460071|ARO:3000165|tetA [Morganella morganii subsp. morganii KT]
NCBI	Tet|tetB_3_AP000342|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	gi|951285167|emb|LN869922.1|886080-884875 gi|884906146|gb|CP012007.1|122591-123796 gi|800908368|gb|KM406488.1|73577-72372 gi|751378954|gb|CP009166.1|1193333-1192128 gi|736028433|gb|CP009056.1|2506024-2504819 gi|731469900|gb|CP009789.1|2025471-2024266 gi|730582171|gb|CP009644.1|2025470-2024265 gi|651033488|emb|HG963476.1|20507-21712 gi|564742695|gb|CP006769.1|65056-63851 gi|522368383|gb|CP003847.1|2994338-2993133
Resfinder	Tet|tetB_3_AP000342|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	tet(B)_3_AP000342
ARG-ANNOT	gi|401871160|gb|JX121118.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-151:JX121118:1-858:858
CARD	gi|401871160|gb|JX121118.1|betalactams|Class_A_betalactamases|SHV	@phgb|JX121118|0-858|ARO:3001190|SHV-151 [Klebsiella pneumoniae]
Lahey	gi|401871160|gb|JX121118.1|betalactams|Class_A_betalactamases|SHV	AFQ23957.1 JX121118.1:1-858
NCBI	gi|401871160|gb|JX121118.1|betalactams|Class_A_betalactamases|SHV	gi|401871160|gb|JX121118.1|1-858
Resfinder	gi|401871160|gb|JX121118.1|betalactams|Class_A_betalactamases|SHV	blaSHV-151_1_JX121118
ARG-ANNOT	Bla|OXA-60|AY664505|1-816|816|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-60:AY664505:1-816:816
NCBI	Bla|OXA-60|AY664505|1-816|816|betalactams|Class_D_betalactamases|OXA	gi|50236432|gb|AY664505.1|1-816
Resfinder	Bla|OXA-60|AY664505|1-816|816|betalactams|Class_D_betalactamases|OXA	blaOXA-60_2_AY664505
NCBI	Rif|NC_010400.5987325|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|169150821|emb|CU468230.2|3000208-2996120
ARG-ANNOT	930|X57730.1|X57730|Trimethoprim|Dihydrofolate_reductase|DHFRIX|RequiresSNPConfirmation	(Tmt)DfrA9:X57730:726-1259:534
NCBI	930|X57730.1|X57730|Trimethoprim|Dihydrofolate_reductase|DHFRIX|RequiresSNPConfirmation	gi|41270|emb|X57730.1|726-1259
Resfinder	930|X57730.1|X57730|Trimethoprim|Dihydrofolate_reductase|DHFRIX|RequiresSNPConfirmation	dfrA9_1_X57730
Lahey	gi|591542809|gb|KJ207201.1|betalactams|Class_C_betalactamases|DHA	AHL39320.1 KJ207201.1:952-2091
NCBI	gi|591542809|gb|KJ207201.1|betalactams|Class_C_betalactamases|DHA	gi|591542809|gb|KJ207201.1|952-2091
NCBI	MLS|ermT_4_AJ488494|MLS|23S_rRNA_methyltransferases|ERMT	gi|28273038|emb|AJ488494.2|10767-11504
Resfinder	MLS|ermT_4_AJ488494|MLS|23S_rRNA_methyltransferases|ERMT	erm(T)_4_AJ488494
ARG-ANNOT	Bla|OKP-A-9|AM051148|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-9:AM051148:1-861:861
CARD	Bla|OKP-A-9|AM051148|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051148|0-861|ARO:3002426|OKP-A-9 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-9|AM051148|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655077|emb|AM051148.1|1-861
Resfinder	Bla|OKP-A-9|AM051148|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-9_1_AM051148
NCBI	AGly|AY00784.1|gene2|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|11345443|gb|AY007784.1|20-574
ARG-ANNOT	Bla|TEM-138|AY853593|215-1075|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-138:AY853593:215-1075:861
CARD	Bla|TEM-138|AY853593|215-1075|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY853593|214-1075|ARO:3001002|TEM-138 [Salmonella enterica]
Lahey	Bla|TEM-138|AY853593|215-1075|861|betalactams|Class_A_betalactamases|TEM	AAW47922.1 AY853593.1:215-1075
NCBI	Bla|TEM-138|AY853593|215-1075|861|betalactams|Class_A_betalactamases|TEM	gi|695211221|ref|NG_036036.1|215-1075
Resfinder	Bla|TEM-138|AY853593|215-1075|861|betalactams|Class_A_betalactamases|TEM	blaTEM-138_1_AY853593
NCBI	gi|388564851|gb|JQ733577.1|betalactams|Class_C_betalactamases|CMY	gi|388564851|gb|JQ733577.1|1027-2255
NCBI	AGly|strA_2_M28829|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|846281253|gb|KP272131.1|3856-3053 gi|846281244|gb|KP272130.1|3858-3055 gi|402294554|gb|JX181780.1|5336-6139 gi|402294540|gb|JX181779.1|8456-9259 gi|402294528|gb|JX181778.1|253-1056 gi|380863171|gb|JQ282797.1|381-1184 gi|145315385|gb|EF467360.1|63-866 gi|145315375|gb|EF467359.1|63-866 gi|145315364|gb|EF467358.1|63-866 gi|120573441|gb|EF189157.1|63-866
Resfinder	AGly|strA_2_M28829|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	strA_2_M28829
ARG-ANNOT	Flq|QnrD|FJ228229|554-1198|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRD	(Flq)QnrD:FJ228229:554-1198:645
CARD	Flq|QnrD|FJ228229|554-1198|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRD	@phgb|FJ228229|553-1198|ARO:3002788|QnrD1 [Salmonella enterica subsp. enterica serovar Bovismorbificans]
NCBI	Flq|QnrD|FJ228229|554-1198|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRD	gi|661568859|gb|KJ685894.1|3410-2766 gi|661568855|gb|KJ685893.1|3410-2766 gi|661568852|gb|KJ685892.1|2884-2240 gi|661568848|gb|KJ685891.1|3410-2766 gi|846324488|gb|KP313759.1|1-645 gi|760459637|gb|KP330456.1|1081-1725 gi|730049049|gb|KM577619.1|38-682 gi|669205879|gb|KF498971.1|947-1591 gi|669205874|gb|KF498970.1|961-1605 gi|597591779|gb|KJ190020.1|1094-1738
Resfinder	Flq|QnrD|FJ228229|554-1198|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRD	QnrD_1_FJ228229
ARG-ANNOT	Bla|CTX-M-117|JN227085|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-117:JN227085:1-876:876
CARD	Bla|CTX-M-117|JN227085|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|JN227085|351-1227|ARO:3001977|CTX-M-117 [Escherichia coli]
Lahey	Bla|CTX-M-117|JN227085|1-876|876|betalactams|Class_A_betalactamases|CTX	AET99223.1 JN227085.1:352-1227
NCBI	Bla|CTX-M-117|JN227085|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|695225979|ref|NG_041449.1|352-1227
Resfinder	Bla|CTX-M-117|JN227085|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-117_1_JN227085
NCBI	Sul|sul1_23_AJ621187|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695210449|ref|NG_035943.1|3369-4208
Resfinder	Sul|sul1_23_AJ621187|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_23_AJ621187
NCBI	Gly|VanS-C_3_EU151752|Glycopeptides|VanC-type_regulator|VANSC	gi|161779845|gb|EU151752.1|4600-5664
Resfinder	Gly|VanS-C_3_EU151752|Glycopeptides|VanC-type_regulator|VANSC	VanS-C_3_EU151752
CARD	Bla|OXA-215_1_JN861783|betalactams|Class_D_betalactamases|OXA	@phgb|JN861783|0-828|ARO:3001714|OXA-215 [Acinetobacter haemolyticus]
Lahey	Bla|OXA-215_1_JN861783|betalactams|Class_D_betalactamases|OXA	AEV91554.1 JN861783.1:1-828
NCBI	Bla|OXA-215_1_JN861783|betalactams|Class_D_betalactamases|OXA	gi|360040239|gb|JN861783.1|1-828
Resfinder	Bla|OXA-215_1_JN861783|betalactams|Class_D_betalactamases|OXA	blaOXA-215_1_JN861783
NCBI	Tet|tetW_1_DQ060146|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	gi|602249396|gb|KJ512988.1|1-1920 gi|602249394|gb|KJ512987.1|7446-9365 gi|166362177|gb|DQ060146.3|2244-4163
Resfinder	Tet|tetW_1_DQ060146|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	tet(W)_1_DQ060146
CARD	Bla|KJ135344.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KJ135344|14-839|ARO:3001567|OXA-381 [Acinetobacter baumannii]
Lahey	Bla|KJ135344.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30285.1 KJ135344.1:15-839
NCBI	Bla|KJ135344.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389167|gb|KJ135344.1|15-839
ARG-ANNOT	Bla|CTX-M-111|JF274243|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-111:JF274243:1-876:876
CARD	Bla|CTX-M-111|JF274243|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|JF274243|0-876|ARO:3001971|CTX-M-111 [Shigella sp. SH202]
Lahey	Bla|CTX-M-111|JF274243|1-876|876|betalactams|Class_A_betalactamases|CTX	AEM44649.1 JF274243.1:1-876
NCBI	Bla|CTX-M-111|JF274243|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|343480065|gb|JF274243.1|1-876
Resfinder	Bla|CTX-M-111|JF274243|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-111_1_JF274243
CARD	Bla|PAO_3_FJ666073|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666073|0-1194|ARO:3002509|PDC-10 [Pseudomonas aeruginosa]
Lahey	Bla|PAO_3_FJ666073|betalactams|Class_C_betalactamases|PDC	ACQ82815.1 FJ666073.1:1-1194
NCBI	Bla|PAO_3_FJ666073|betalactams|Class_C_betalactamases|PDC	gi|229597535|gb|FJ666073.1|1-1194
Resfinder	Bla|PAO_3_FJ666073|betalactams|Class_C_betalactamases|PDC	blaPAO_3_FJ666073
NCBI	Flq|NC_007795.3919179|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|827440804|gb|CP011526.1|7032-9695 gi|777226173|emb|LN831049.1|692495-689832 gi|374362062|gb|CP003033.1|7005-9668 gi|87201381|gb|CP000253.1|7005-9668 gi|540540|dbj|D10489.1|STAGYRABA|2152-4815
CARD	CARD|pvgb|AL450380|5228-7265|ARO:3003304|Mycobacterium|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	@pvgb|AL450380|5228-7265|ARO:3003304|Mycobacterium leprae gyrB conferring resistance to fluoroquinolone [Mycobacterium leprae TN]
NCBI	CARD|pvgb|AL450380|5228-7265|ARO:3003304|Mycobacterium|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	gi|219932450|emb|FM211192.1|5229-7266 gi|13092412|emb|AL583917.1|5229-7266 gi|2344819|emb|Z70722.1|4260-6297
ARG-ANNOT	Flq|QnrB37|JN173059|36-680|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB37:JN173059:36-680:645
CARD	Flq|QnrB37|JN173059|36-680|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JN173059|35-680|ARO:3002752|QnrB37 [Citrobacter freundii]
NCBI	Flq|QnrB37|JN173059|36-680|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|341873930|gb|JN173059.1|36-680
Resfinder	Flq|QnrB37|JN173059|36-680|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB37_1_JN173059
CARD	CARD|phgb|DQ212986|7787-9926|ARO:3002972|vanTG|Glycopeptides|VanG-type_resistance_protein|VANTG	@phgb|DQ212986|7787-9926|ARO:3002972|vanTG [Enterococcus faecalis]
NCBI	CARD|phgb|DQ212986|7787-9926|ARO:3002972|vanTG|Glycopeptides|VanG-type_resistance_protein|VANTG	gi|762041216|gb|KF697366.1|40498-42637 gi|672937785|gb|KF686317.1|40498-42637 gi|674114364|gb|CP007573.1|766352-768491 gi|674107077|gb|CP007570.1|644608-646747 gi|77380191|gb|DQ212986.1|7788-9927 gi|33355827|gb|AY271782.1|22852-24991
ARG-ANNOT	gi|280983556|gb|GU208678.1|betalactams|Class_A_betalactamases|GES	(Bla)GES-15:GU208678:1-864:864
CARD	gi|280983556|gb|GU208678.1|betalactams|Class_A_betalactamases|GES	@phgb|GU208678|0-864|ARO:3002344|GES-15 [Pseudomonas aeruginosa]
Lahey	gi|280983556|gb|GU208678.1|betalactams|Class_A_betalactamases|GES	ACZ98826.1 GU208678.1:1-864
NCBI	gi|280983556|gb|GU208678.1|betalactams|Class_A_betalactamases|GES	gi|280983556|gb|GU208678.1|1-864
Resfinder	gi|280983556|gb|GU208678.1|betalactams|Class_A_betalactamases|GES	blaGES-15_1_GU208678
NCBI	Sul|CP000647.1|gene3624|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|723234405|gb|CP009863.1|4713480-4712632 gi|499527875|emb|FO203501.1|4893434-4892586 gi|150953431|gb|CP000647.1|3948486-3947638
ARG-ANNOT	Tmt|DfrA31|AB200915|1832-2305|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA31:AB200915:1832-2305:474
NCBI	Tmt|DfrA31|AB200915|1832-2305|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|507137590|gb|KC540630.1|1010-537 gi|298399408|gb|HM015627.1|1792-2265 gi|238815133|gb|FJ968160.1|7404-6931 gi|193200836|gb|EU574928.1|4579-4106 gi|58219327|dbj|AB200915.1|2305-1832
Resfinder	Tmt|DfrA31|AB200915|1832-2305|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA31_1_AB200915
ARG-ANNOT	MLS|ErmD|M29832|430-1293|864|MLS|23S_rRNA_methyltransferases|ERMD	(MLS)ErmD:M29832:430-1293:864
CARD	MLS|ErmD|M29832|430-1293|864|MLS|23S_rRNA_methyltransferases|ERMD	@phgb|M29832|0-864|ARO:3000495|ErmD [Bacillus licheniformis]
NCBI	MLS|ErmD|M29832|430-1293|864|MLS|23S_rRNA_methyltransferases|ERMD	gi|143199|gb|M29832.1|BACMLSERMD|430-1293
Resfinder	MLS|ErmD|M29832|430-1293|864|MLS|23S_rRNA_methyltransferases|ERMD	erm(D)_1_M29832
ARG-ANNOT	Bla|CMY-42|HM146927|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-42:HM146927:1-1146:1146
CARD	Bla|CMY-42|HM146927|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|HM146927|0-1146|ARO:3002053|CMY-42 [Escherichia coli]
Lahey	Bla|CMY-42|HM146927|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ADM21467.1 HM146927.1:1-1146
NCBI	Bla|CMY-42|HM146927|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|825091815|gb|KP789019.1|28860-30005 gi|304304322|gb|HM146927.1|1-1146
Resfinder	Bla|CMY-42|HM146927|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-42_1_HM146927
ARG-ANNOT	Bla|LEN-16|AY743416|68-928|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-16:AY743416:68-928:861
CARD	Bla|LEN-16|AY743416|68-928|861|betalactams|Class_A_betalactamases|LEN	@phgb|AY743416|67-928|ARO:3002464|LEN-16 [Klebsiella pneumoniae]
NCBI	Bla|LEN-16|AY743416|68-928|861|betalactams|Class_A_betalactamases|LEN	gi|53681040|gb|AY743416.1|68-928
Resfinder	Bla|LEN-16|AY743416|68-928|861|betalactams|Class_A_betalactamases|LEN	blaLEN16_1_AY743416
ARG-ANNOT	1230|JX023441.1|JX023441|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)dhfr7:X58425:594-1067:474
CARD	1230|JX023441.1|JX023441|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|FJ854362|2338-2812|ARO:3002862|dfrA7 [Acinetobacter baumannii]
NCBI	1230|JX023441.1|JX023441|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|952556149|emb|LN879484.1|83355-82882 gi|943496806|gb|KR952342.1|112-585 gi|943496800|gb|KR952339.1|642-169 gi|910270283|gb|KP789951.1|80-553 gi|816208797|gb|CP011331.1|4668406-4667933 gi|787862679|gb|CP008707.1|30049-29576 gi|751372777|gb|KM823525.1|110-583 gi|745369752|emb|HF572917.2|4367307-4367780 gi|742954016|gb|CP010372.1|113303-113776 gi|701224700|gb|KF914307.1|102-575
CARD	CARD|phgb|U00096|3415032-3418137|ARO:3000502|acrF|Aminoglycosides|Aminoglycoside_efflux_pumps|ACRF	@phgb|U00096|3415032-3418137|ARO:3000502|acrF [Escherichia coli str. K-12 substr. MG1655]
NCBI	CARD|phgb|U00096|3415032-3418137|ARO:3000502|acrF|Aminoglycosides|Aminoglycoside_efflux_pumps|ACRF	gi|985000614|gb|CP014225.1|1612233-1615338 gi|958627747|gb|CP013253.1|8628-5523 gi|939732440|gb|CP011343.2|3390767-3393872 gi|939731527|gb|CP011342.2|3391421-3394526 gi|937526251|gb|CP012870.1|1226623-1223518 gi|937521852|gb|CP012869.1|1226623-1223518 gi|937517453|gb|CP012868.1|1226623-1223518 gi|932857508|emb|LN877770.1|4239529-4242634 gi|923416119|gb|CP011113.1|3371750-3374855 gi|899729770|gb|CP012127.1|3389478-3392583
CARD	CARD|phgb|KP109677|4318-5179|ARO:3003670|PEDO-1|betalactams|Class_B_betalactamases|PEDO	@phgb|KP109677|4318-5179|ARO:3003670|PEDO-1 [Pedobacter sp. SI-33]
NCBI	CARD|phgb|KP109677|4318-5179|ARO:3003670|PEDO-1|betalactams|Class_B_betalactamases|PEDO	gi|762020412|gb|KP109677.1|4319-5179
NCBI	Bla|LEN-26_1_JQ067123|betalactams|Class_A_betalactamases|LEN	gi|372995327|gb|JQ067123.1|1-861
Resfinder	Bla|LEN-26_1_JQ067123|betalactams|Class_A_betalactamases|LEN	blaLEN26_1_JQ067123
ARG-ANNOT	Bla|B-14|JN635697|973-1719|747|betalactams|Class_B_betalactamases|BLAB	(Bla)B-14:JN635697:973-1719:747
NCBI	Bla|B-14|JN635697|973-1719|747|betalactams|Class_B_betalactamases|BLAB	gi|373346550|gb|JN635697.1|973-1719
Resfinder	Bla|B-14|JN635697|973-1719|747|betalactams|Class_B_betalactamases|BLAB	blaB-14_1_JN635697
CARD	CARD|phgb|JQ340367|19-685|ARO:3003582|PmrA|Cationic_antimicrobial_peptides|Polymyxin_B_resistance_regulator|pmrA	@phgb|JQ340367|19-685|ARO:3003582|PmrA [Pseudomonas aeruginosa]
NCBI	CARD|phgb|JQ340367|19-685|ARO:3003582|PmrA|Cationic_antimicrobial_peptides|Polymyxin_B_resistance_regulator|pmrA	gi|982189197|gb|CP013993.1|6107609-6108274 gi|974359204|gb|CP008871.1|136214-135549 gi|974282928|gb|CP008861.1|4790858-4790193 gi|371574706|gb|JQ340367.1|20-685
ARG-ANNOT	Flq|QnrB1|DQ351241|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB1:DQ351241:37-681:645
CARD	Flq|QnrB1|DQ351241|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|DQ351241|0-681|ARO:3002714|QnrB1 [Klebsiella pneumoniae]
NCBI	Flq|QnrB1|DQ351241|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|927043620|gb|CP012554.1|227718-227038 gi|695212762|ref|NG_036487.1|5270-5950 gi|695212758|ref|NG_036486.1|3773-4453 gi|695200887|ref|NG_036203.1|1-681
Resfinder	Flq|QnrB1|DQ351241|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB1_1_EF682133
ARG-ANNOT	414|AF279904.1|AF279904|betalactams|Class_A_betalactamases|CTX	(Bla)AST-1:AF279904:160-1092:933
NCBI	414|AF279904.1|AF279904|betalactams|Class_A_betalactamases|CTX	gi|12006347|gb|AF279904.1|AF279904|160-1092
Resfinder	414|AF279904.1|AF279904|betalactams|Class_A_betalactamases|CTX	blaAST-1_1_AF279904
NCBI	Gly|VanX-B_1_AF192329|Glycopeptides|VanB-type_resistance_protein|VANXB	gi|695199646|ref|NG_035288.1|29869-30477
Resfinder	Gly|VanX-B_1_AF192329|Glycopeptides|VanB-type_resistance_protein|VANXB	VanX-B_1_AF192329
CARD	CARD|phgb|NC_002695|4904931-4905630|ARO:3000831|cpxR|Multi-drug_resistance|MDR_regulator|CPXA	@phgb|NC_002695|4904931-4905630|ARO:3000831|cpxR [Escherichia coli O157:H7 str. Sakai]
NCBI	CARD|phgb|NC_002695|4904931-4905630|ARO:3000831|cpxR|Multi-drug_resistance|MDR_regulator|CPXA	gi|937297913|gb|CP012802.1|4777308-4778007 gi|734586714|gb|CP010304.1|4924585-4925284 gi|667689599|gb|CP008957.1|4992558-4993257 gi|666001753|gb|CP008805.1|4959839-4960538 gi|386794017|gb|CP001925.1|4831684-4832383 gi|374356928|gb|CP003109.1|4700903-4701602 gi|290760697|gb|CP001846.1|4792574-4793273 gi|254590536|gb|CP001368.1|4964105-4964804 gi|209157093|gb|CP001164.1|5008045-5008744 gi|47118301|dbj|BA000007.2|4904932-4905631
ARG-ANNOT	AGly|Aac6-It|AF031328|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-It:AF031328:1-441:441
CARD	AGly|Aac6-It|AF031328|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF031328|0-441|ARO:3002564|AAC(6')-It [Acinetobacter genomosp. 16BJ]
NCBI	AGly|Aac6-It|AF031328|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|2909808|gb|AF031328.1|1-441
Resfinder	AGly|Aac6-It|AF031328|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-It_1_AF031328
NCBI	Gly|VanW-B_1_AF192329|Glycopeptides|VanB-type_accessory_protein|VANWB	gi|695199646|ref|NG_035288.1|27047-27874
Resfinder	Gly|VanW-B_1_AF192329|Glycopeptides|VanB-type_accessory_protein|VANWB	VanW-B_1_AF192329
CARD	gi|607346569|gb|KJ155695.1|betalactams|Class_C_betalactamases|CMY	@phgb|KJ155695|0-1146|ARO:3002122|CMY-111 [Serratia marcescens]
Lahey	gi|607346569|gb|KJ155695.1|betalactams|Class_C_betalactamases|CMY	AHW47897.1 KJ155695.1:1-1146
NCBI	gi|607346569|gb|KJ155695.1|betalactams|Class_C_betalactamases|CMY	gi|607346569|gb|KJ155695.1|1-1146
ARG-ANNOT	gi|526260845|gb|KF150216.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-104:KF150216:1-1146:1146
CARD	gi|526260845|gb|KF150216.1|betalactams|Class_C_betalactamases|CMY	@phgb|KF150216|0-1146|ARO:3002116|CMY-104 [Citrobacter sp. OTESBL0707]
Lahey	gi|526260845|gb|KF150216.1|betalactams|Class_C_betalactamases|CMY	AGR82311.1 KF150216.1:1-1146
NCBI	gi|526260845|gb|KF150216.1|betalactams|Class_C_betalactamases|CMY	gi|526260845|gb|KF150216.1|1-1146
Resfinder	gi|526260845|gb|KF150216.1|betalactams|Class_C_betalactamases|CMY	blaCMY-104_1_KF150216
CARD	AGly|AM283490.1|gene4|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AM283490|2414-2969|ARO:3002585|AAC(6')-31 [Acinetobacter baumannii]
NCBI	AGly|AM283490.1|gene4|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|772402180|gb|KP177455.1|1332-1886 gi|575771391|dbj|AB901040.1|525-1079 gi|346644633|dbj|AB625453.1|936-1490 gi|110350566|emb|AM283490.1|2415-2969 gi|110350560|emb|AM283489.1|2620-3174 gi|47155068|emb|AJ640197.1|2438-2992
ARG-ANNOT	Bla|OXA-165|HM488986|1-822|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-165:HM488986:1-822:822
CARD	Bla|OXA-165|HM488986|1-822|822|betalactams|Class_D_betalactamases|OXA	@phgb|HM488986|0-822|ARO:3001465|OXA-165 [Acinetobacter baumannii]
Lahey	Bla|OXA-165|HM488986|1-822|822|betalactams|Class_D_betalactamases|OXA	ADK35869.1 HM488986.1:1-822
NCBI	Bla|OXA-165|HM488986|1-822|822|betalactams|Class_D_betalactamases|OXA	gi|300825669|gb|HM488986.1|1-822
Resfinder	Bla|OXA-165|HM488986|1-822|822|betalactams|Class_D_betalactamases|OXA	blaOXA-165_1_HM488986
NCBI	Bla|blaZ_34_AP003139|betalactams|Class_A_betalactamases|BLAZ	gi|90960963|dbj|AB255366.1|7716-8561 gi|13774139|dbj|AP003139.1|7945-8790
Resfinder	Bla|blaZ_34_AP003139|betalactams|Class_A_betalactamases|BLAZ	blaZ_34_AP003139
CARD	gi|757399519|gb|KP050492.1|betalactams|Class_A_betalactamases|TEM	@phgb|KP050492|0-861|ARO:3001392|TEM-215 [Escherichia coli]
Lahey	gi|757399519|gb|KP050492.1|betalactams|Class_A_betalactamases|TEM	AJO16045.1 KP050492.1:1-861
NCBI	gi|757399519|gb|KP050492.1|betalactams|Class_A_betalactamases|TEM	gi|757399519|gb|KP050492.1|1-861
NCBI	Bla|AJ420864.1|gene1|betalactams|Class_B_betalactamases|IMP	gi|25278055|emb|AJ420864.1|1-1110
NCBI	Bla|CTX-M-9_7AJ416345|betalactams|Class_A_betalactamases|CTX	gi|16304825|emb|AJ416345.1|132-1007 gi|825088700|gb|KP975077.1|39408-38535 gi|516560780|gb|JX515588.1|200604-199731 gi|299483205|gb|HM569735.1|1115-1988 gi|130918109|gb|EF441350.1|132-1005 gi|695200454|ref|NG_036140.1|5317-6190 gi|695208190|ref|NG_035493.1|6336-7209 gi|695200140|ref|NG_035386.1|1-874 gi|71273537|emb|AM040708.1|5582-6455
Resfinder	Bla|CTX-M-9_7AJ416345|betalactams|Class_A_betalactamases|CTX	blaCTX-M-9_7_AJ416345
ARG-ANNOT	gi|42406214|gb|AY524988.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-9:AY524988:1-801:801
CARD	gi|42406214|gb|AY524988.1|betalactams|Class_B_betalactamases|VIM	@phgb|AY524988|0-801|ARO:3002279|VIM-9 [Pseudomonas aeruginosa]
Lahey	gi|42406214|gb|AY524988.1|betalactams|Class_B_betalactamases|VIM	AAS13760.1 AY524988.1:1-801
NCBI	gi|42406214|gb|AY524988.1|betalactams|Class_B_betalactamases|VIM	gi|42406214|gb|AY524988.1|1-801
Resfinder	gi|42406214|gb|AY524988.1|betalactams|Class_B_betalactamases|VIM	blaVIM-9_1_AY524988
ARG-ANNOT	Bla|OXA-216|FR865168|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-216:FR865168:1-825:825
CARD	Bla|OXA-216|FR865168|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|FR865168|0-825|ARO:3001488|OXA-216 [Acinetobacter baumannii]
Lahey	Bla|OXA-216|FR865168|1-825|825|betalactams|Class_D_betalactamases|OXA	CCA94649.1 FR865168.1:1-825
NCBI	Bla|OXA-216|FR865168|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|340343128|emb|FR865168.1|1-825
Resfinder	Bla|OXA-216|FR865168|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-216_1_FR865168
ARG-ANNOT	Flq|QnrB47|JQ349155|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB47:JQ349155:1-680:680
NCBI	Flq|QnrB47|JQ349155|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|375332214|gb|JQ349155.1|1-680
Resfinder	Flq|QnrB47|JQ349155|1-680|680|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB47_1_JQ349155
ARG-ANNOT	CARD|phgb|M57437|0-1647|ARO:3002827|tlrC|MLS|ABC_transporter|TLRC	(MLS)TlrC:M57437:277-1923:1647
CARD	CARD|phgb|M57437|0-1647|ARO:3002827|tlrC|MLS|ABC_transporter|TLRC	@phgb|M57437|0-1647|ARO:3002827|tlrC [Streptomyces fradiae]
NCBI	CARD|phgb|M57437|0-1647|ARO:3002827|tlrC|MLS|ABC_transporter|TLRC	gi|153507|gb|M57437.1|STMTLRC|277-1923
Resfinder	CARD|phgb|M57437|0-1647|ARO:3002827|tlrC|MLS|ABC_transporter|TLRC	tlr(C)_1_M57437
ARG-ANNOT	gi|404432494|emb|HE963770.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-249:HE963770:1-825:825
CARD	gi|404432494|emb|HE963770.1|betalactams|Class_D_betalactamases|OXA	@phgb|HE963770|0-825|ARO:3001674|OXA-249 [Acinetobacter baumannii]
Lahey	gi|404432494|emb|HE963770.1|betalactams|Class_D_betalactamases|OXA	CCJ32597.1 HE963770.1:1-825
NCBI	gi|404432494|emb|HE963770.1|betalactams|Class_D_betalactamases|OXA	gi|404432494|emb|HE963770.1|1-825
Resfinder	gi|404432494|emb|HE963770.1|betalactams|Class_D_betalactamases|OXA	blaOXA-249_1_HE963770
ARG-ANNOT	576|M20305.1|RP43APHA|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-Ib:M20305:779-1594:816
CARD	576|M20305.1|RP43APHA|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|M20305|778-1594|ARO:3002642|APH(3')-Ib [Plasmid RP4]
NCBI	576|M20305.1|RP43APHA|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|674252391|gb|CP008739.2|6811143-6811958 gi|157277474|tpe|BN000925.1|38716-39531 gi|508311|gb|L27758.1|BIACOMGEN|38716-39531 gi|152537|gb|M20305.1|RP43APHA|779-1594 gi|262117804|dbj|AB526840.1|21777-22338 gi|262117761|dbj|AB526839.1|20971-21532 gi|359500352|gb|JN243350.1|1820-1973 gi|359500352|gb|JN243350.1|1-110 gi|359500350|gb|JN243349.1|823-976 gi|359500348|gb|JN243348.1|989-1142 gi|359500348|gb|JN243348.1|1-111 gi|359500346|gb|JN243346.1|195-348 gi|359500346|gb|JN243346.1|1-111
Resfinder	576|M20305.1|RP43APHA|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-Ib_1_M20305
NCBI	gi|751813261|gb|KM979379.1|betalactams|Class_D_betalactamases|OXA	gi|751813261|gb|KM979379.1|1-867
ARG-ANNOT	Bla|OXA-3|L07945|61-888|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-3:L07945:61-888:828
CARD	Bla|OXA-3|L07945|61-888|828|betalactams|Class_D_betalactamases|OXA	@phgb|L07945|60-888|ARO:3001398|OXA-3 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-3|L07945|61-888|828|betalactams|Class_D_betalactamases|OXA	AAC41449.1 L07945.1:61-888
NCBI	Bla|OXA-3|L07945|61-888|828|betalactams|Class_D_betalactamases|OXA	gi|784887|gb|L07945.1|PSEBLAOXA3|61-888
Resfinder	Bla|OXA-3|L07945|61-888|828|betalactams|Class_D_betalactamases|OXA	blaOXA-3_1_L07945
ARG-ANNOT	Bla|TEM-169|FJ873740|1-858|858|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-169:FJ873740:1-858:858
CARD	Bla|TEM-169|FJ873740|1-858|858|betalactams|Class_A_betalactamases|TEM	@phgb|FJ873740|0-858|ARO:3001035|TEM-169 [Salmonella enterica subsp. enterica serovar Infantis]
Lahey	Bla|TEM-169|FJ873740|1-858|858|betalactams|Class_A_betalactamases|TEM	ACP18864.1 FJ873740.1:1-858
NCBI	Bla|TEM-169|FJ873740|1-858|858|betalactams|Class_A_betalactamases|TEM	gi|744393338|gb|KP012538.1|1-858 gi|227462935|gb|FJ873740.1|1-858
Resfinder	Bla|TEM-169|FJ873740|1-858|858|betalactams|Class_A_betalactamases|TEM	blaTEM-169_1_FJ873740
CARD	AGly|AY712687.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	@phgb|AY712687|0-831|ARO:3002628|aad(6) [Streptococcus oralis]
NCBI	AGly|AY712687.1|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|974161314|gb|CP012018.1|406383-407213 gi|974158397|gb|CP012015.1|406390-407220 gi|974155539|gb|CP012013.1|407432-408262 gi|974152716|gb|CP012012.1|406593-407423 gi|974149849|gb|CP012011.1|452433-453263 gi|827342679|gb|KR066794.1|11870-11040 gi|938507137|gb|KP842560.1|1696-2526 gi|929858715|gb|CP010402.1|54007-54837 gi|777211012|emb|LN831036.1|53491-54321 gi|749389159|gb|KJ645709.1|44011-44841
ARG-ANNOT	gi|215398944|gb|FJ437066.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-44:FJ437066:1-1134:1134
CARD	gi|215398944|gb|FJ437066.1|betalactams|Class_C_betalactamases|CMY	@phgb|FJ437066|0-1134|ARO:3002055|CMY-44 [Escherichia coli]
Lahey	gi|215398944|gb|FJ437066.1|betalactams|Class_C_betalactamases|CMY	ACJ65711.1 FJ437066.1:1-1134
NCBI	gi|215398944|gb|FJ437066.1|betalactams|Class_C_betalactamases|CMY	gi|215398944|gb|FJ437066.1|1-1134
Resfinder	gi|215398944|gb|FJ437066.1|betalactams|Class_C_betalactamases|CMY	blaCMY-44_1_FJ437066
ARG-ANNOT	Bla|OXA-131|EU547446|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-131:EU547446:1-825:825
CARD	Bla|OXA-131|EU547446|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|EU547446|0-825|ARO:3001652|OXA-131 [Acinetobacter baumannii]
Lahey	Bla|OXA-131|EU547446|1-825|825|betalactams|Class_D_betalactamases|OXA	ACD84989.1 EU547446.1:1-825
NCBI	Bla|OXA-131|EU547446|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|189214265|gb|EU547446.1|1-825
Resfinder	Bla|OXA-131|EU547446|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-131_1_EU547446
CARD	gi|675599151|gb|KJ934265.1|betalactams|Class_A_betalactamases|CARB	@phgb|KJ934265|0-852|ARO:3002254|CARB-17 [Vibrio parahaemolyticus]
Lahey	gi|675599151|gb|KJ934265.1|betalactams|Class_A_betalactamases|CARB	AIL92326.1 KJ934265.1:1-852
NCBI	gi|675599151|gb|KJ934265.1|betalactams|Class_A_betalactamases|CARB	gi|675599151|gb|KJ934265.1|1-852
NCBI	gi|259120753|gb|FJ815436.1|betalactams|Class_A_betalactamases|CTX	gi|695214521|ref|NG_036820.1|1-1174
NCBI	gi|121495528|emb|AM411407.1|betalactams|Class_A_betalactamases|CTX	gi|121495528|emb|AM411407.1|1-941
CARD	CARD|phgb|AJ746361|6742-7303|ARO:3003019|dfrA23|Trimethoprim|Dihydrofolate_reductase|DFRA	@phgb|AJ746361|6742-7303|ARO:3003019|dfrA23 [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	CARD|phgb|AJ746361|6742-7303|ARO:3003019|dfrA23|Trimethoprim|Dihydrofolate_reductase|DFRA	gi|933685907|gb|KR827392.1|7580-8141 gi|695211084|ref|NG_036020.1|6743-7304
ARG-ANNOT	Bla|OXA-72|AY739646|1-828|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-72:AY739646:1-828:828
NCBI	Bla|OXA-72|AY739646|1-828|828|betalactams|Class_D_betalactamases|OXA	gi|950835349|gb|KR535993.1|2833-2006 gi|908777896|gb|KT022421.1|7838-7011 gi|908777896|gb|KT022421.1|33-1 gi|551843602|dbj|AB857844.1|288-1115 gi|695214926|ref|NG_036915.1|5334-6161 gi|511349898|dbj|AB823544.1|5268-6095 gi|441494715|gb|JX968505.1|870-43 gi|398359511|gb|JX069966.1|3012-2185 gi|398359511|gb|JX069966.1|9003-9830 gi|312064060|gb|HQ219688.1|6-833 gi|307128755|gb|GU199039.2|1206-2033 gi|204304419|gb|FJ157355.1|23-850
Resfinder	Bla|OXA-72|AY739646|1-828|828|betalactams|Class_D_betalactamases|OXA	blaOXA-72_1_GU199039
CARD	Sul|EF118171.1|gene7|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	@phgb|JF969163|1053-1893|ARO:3000410|sul1 [Vibrio fluvialis]
NCBI	Sul|EF118171.1|gene7|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|984881271|gb|CP014215.1|2292203-2291363 gi|984881271|gb|CP014215.1|2304967-2304127 gi|970698242|gb|KT988020.1|22635-23475 gi|970698221|gb|KT988019.1|7447-8287 gi|970698093|gb|KT988018.1|115121-115961 gi|982189197|gb|CP013993.1|5424788-5425628 gi|982189197|gb|CP013993.1|5430539-5431065 gi|974752094|gb|KT164809.1|5954-5114 gi|974751547|gb|KU130294.1|238652-237812 gi|974751547|gb|KU130294.1|233473-234001 gi|974751143|gb|KU238092.1|13028-12188 gi|975048878|gb|CP013962.1|2821897-2822737 gi|974255378|gb|CP008857.1|6671283-6672123
ARG-ANNOT	Bla|TEM-7|AF527798|1-785|785|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-7:AF527798:1-785:785
CARD	Bla|TEM-7|AF527798|1-785|785|betalactams|Class_A_betalactamases|TEM	@phgb|AF527798|0-785|ARO:3000879|TEM-7 [Escherichia coli]
NCBI	Bla|TEM-7|AF527798|1-785|785|betalactams|Class_A_betalactamases|TEM	gi|28195098|gb|AF527798.1|1-785
NCBI	Bla|AM849805.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|695212971|ref|NG_036530.1|183-1123
ARG-ANNOT	gi|77021907|gb|DQ193536.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-89:DQ193536:1-861:861
CARD	gi|77021907|gb|DQ193536.1|betalactams|Class_A_betalactamases|SHV	@phgb|DQ193536|0-861|ARO:3001141|SHV-89 [Klebsiella pneumoniae]
Lahey	gi|77021907|gb|DQ193536.1|betalactams|Class_A_betalactamases|SHV	ABA60809.1 DQ193536.1:1-861
NCBI	gi|77021907|gb|DQ193536.1|betalactams|Class_A_betalactamases|SHV	gi|695200700|ref|NG_036160.1|1-861
Resfinder	gi|77021907|gb|DQ193536.1|betalactams|Class_A_betalactamases|SHV	blaSHV-89_1_DQ193536
CARD	gi|597441558|gb|KF048909.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF048909|0-825|ARO:3001526|OXA-338 [Acinetobacter baumannii]
Lahey	gi|597441558|gb|KF048909.1|betalactams|Class_D_betalactamases|OXA	AHN07454.1 KF048909.1:1-825
NCBI	gi|597441558|gb|KF048909.1|betalactams|Class_D_betalactamases|OXA	gi|597441558|gb|KF048909.1|1-825
ARG-ANNOT	Bla|IND-5|AY504627|1-720|720|betalactams|Class_B_betalactamases|IND	(Bla)IND-5:AY504627:1-720:720
CARD	Bla|IND-5|AY504627|1-720|720|betalactams|Class_B_betalactamases|IND	@phgb|AY504627|0-720|ARO:3002261|IND-5 [Chryseobacterium indologenes]
Lahey	Bla|IND-5|AY504627|1-720|720|betalactams|Class_B_betalactamases|IND	AAS78754.1 AY504627.1:1-720
NCBI	Bla|IND-5|AY504627|1-720|720|betalactams|Class_B_betalactamases|IND	gi|45861942|gb|AY504627.1|1-720
Resfinder	Bla|IND-5|AY504627|1-720|720|betalactams|Class_B_betalactamases|IND	blaIND-5_1_AY504627
ARG-ANNOT	Bla|CTX-M-93|HQ637575|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-98:HQ637575:1-876:876
CARD	Bla|CTX-M-93|HQ637575|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|HM755448|244-1120|ARO:3001957|CTX-M-98 [Escherichia coli]
Lahey	Bla|CTX-M-93|HQ637575|1-876|876|betalactams|Class_A_betalactamases|CTX	ADO17948.1 HM755448.1:245-1120
NCBI	Bla|CTX-M-93|HQ637575|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|512134475|gb|KF022000.1|23-898 gi|313510881|gb|HQ637575.1|1-876 gi|308198798|gb|HM755448.1|245-1120
Resfinder	Bla|CTX-M-93|HQ637575|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-98_1_HM755448
NCBI	Mdr|NC_002163.1.904691|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	gi|938159898|gb|CP012696.1|338960-338328 gi|826025910|gb|KP856934.1|1-633 gi|780862670|gb|CP003871.3|337347-336715 gi|756014142|gb|CP010307.1|339704-339072 gi|736041472|gb|CP010058.1|337846-337214 gi|690551456|gb|CP006729.2|376449-375817 gi|690545238|gb|CP006709.2|376450-375818 gi|690532631|gb|CP006708.2|337895-337263 gi|690532129|gb|CP006707.2|376449-375817 gi|589078008|gb|CP006689.1|337545-336913
NCBI	gi|591542868|gb|KJ207204.1|betalactams|Class_C_betalactamases|CMY	gi|591542868|gb|KJ207204.1|580-1808
NCBI	Bla|mecA_14_AB505630|betalactams|Penicillin_binding_protein|MECA	gi|961586173|gb|CP013621.1|39642-41651 gi|908234448|gb|CP010309.1|43020-45029 gi|817181192|gb|KP777553.1|8027-6018 gi|403411202|emb|HE980450.1|5886-3877 gi|340545416|dbj|AB505630.1|5948-7957
Resfinder	Bla|mecA_14_AB505630|betalactams|Penicillin_binding_protein|MECA	mecA_14_AB505630
ARG-ANNOT	gi|208503046|gb|FJ214367.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-84:FJ214367:1-876:876
CARD	gi|208503046|gb|FJ214367.1|betalactams|Class_A_betalactamases|CTX	@phgb|FJ214367|0-876|ARO:3001945|CTX-M-84 [Salmonella enterica subsp. enterica serovar Derby]
Lahey	gi|208503046|gb|FJ214367.1|betalactams|Class_A_betalactamases|CTX	ACI29346.1 FJ214367.1:1-876
NCBI	gi|208503046|gb|FJ214367.1|betalactams|Class_A_betalactamases|CTX	gi|208503046|gb|FJ214367.1|1-876
Resfinder	gi|208503046|gb|FJ214367.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-84_1_FJ214367
NCBI	Sul|NC_002952.2860679|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|703576232|gb|CP009554.1|497697-498500 gi|701162461|emb|LN626917.1|2115506-2114703 gi|685631213|gb|CP009361.1|503794-504597 gi|312436391|gb|CP002110.1|10309-9506 gi|49240382|emb|BX571856.1|554802-555605 gi|2058355|emb|Z84573.1|133-936
CARD	Mdr|AF535087.1|gene1|Multi-drug_resistance|Multi-drug_efflux_pumps|QACAB	@phgb|AF535087|28-1573|ARO:3003047|qacB [Staphylococcus aureus]
NCBI	Mdr|AF535087.1|gene1|Multi-drug_resistance|Multi-drug_efflux_pumps|QACAB	gi|33330900|gb|AF535087.1|29-1573
ARG-ANNOT	Gly|VanR-Pt2|AY926880|718-1413|696|Glycopeptides|VanA-type_regulator|VANRA	(Gly)VanR-Pt2:AY926880:718-1413:696
NCBI	Gly|VanR-Pt2|AY926880|718-1413|696|Glycopeptides|VanA-type_regulator|VANRA	gi|257412320|gb|AY926880.2|718-1413
Resfinder	Gly|VanR-Pt2|AY926880|718-1413|696|Glycopeptides|VanA-type_regulator|VANRA	VanR-Pt2_4_AY926880
CARD	Mdr|NC_003112.2.904054|Multi-drug_resistance|MDR_mutant_porin_proteins|PORB|RequiresSNPConfirmation	@pvgb|NC_003112|2157528-2158524|ARO:3000464|Neisseria gonorrhoeae mutant porin PIB (por) with reduced permeability to antibiotic [Neisseria meningitidis MC58]
NCBI	Mdr|NC_003112.2.904054|Multi-drug_resistance|MDR_mutant_porin_proteins|PORB|RequiresSNPConfirmation	gi|325199235|gb|CP002420.1|2126066-2127061 gi|66731897|gb|AE002098.2|2157529-2158524 gi|45212|emb|X65532.1|13-1008 gi|270728226|gb|GQ173977.1|1-862
ARG-ANNOT	gi|239909270|gb|GQ149244.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-75:GQ149244:1-873:873
CARD	gi|239909270|gb|GQ149244.1|betalactams|Class_A_betalactamases|CTX	@phgb|GQ149244|0-873|ARO:3001936|CTX-M-75 [Providencia stuartii]
Lahey	gi|239909270|gb|GQ149244.1|betalactams|Class_A_betalactamases|CTX	ACS32294.1 GQ149244.1:1-873
NCBI	gi|239909270|gb|GQ149244.1|betalactams|Class_A_betalactamases|CTX	gi|239909270|gb|GQ149244.1|1-873
Resfinder	gi|239909270|gb|GQ149244.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-75_1_GQ149244
ARG-ANNOT	Bla|LEN-13|AJ635403|1-789|789|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-13:AJ635403:1-789:789
CARD	Bla|LEN-13|AJ635403|1-789|789|betalactams|Class_A_betalactamases|LEN	@phgb|AJ635403|0-789|ARO:3002463|LEN-13 [Klebsiella pneumoniae]
NCBI	Bla|LEN-13|AJ635403|1-789|789|betalactams|Class_A_betalactamases|LEN	gi|288887617|gb|CP001891.1|2842033-2842821 gi|46309181|emb|AJ635403.1|1-789
Resfinder	Bla|LEN-13|AJ635403|1-789|789|betalactams|Class_A_betalactamases|LEN	blaLEN13_1_AJ635403
NCBI	Tet|tetA_3_AY196695|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|984658883|dbj|LC121523.1|5455-4256 gi|961494512|gb|KT950741.1|13358-14557 gi|961494501|gb|KT950740.1|12725-13924 gi|788321380|gb|KM116512.1|8110-9309 gi|788321347|gb|KM116511.1|7931-9130 gi|788321324|gb|KM116510.1|7982-9181 gi|788321306|gb|KM116509.1|7890-9089 gi|788321290|gb|KM116508.1|7888-9087 gi|788321263|gb|KM116507.1|8082-9281 gi|788321242|gb|KM116506.1|7917-9116
Resfinder	Tet|tetA_3_AY196695|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tet(A)_3_AY196695
NCBI	Tet|tet32_1_EU722333|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET32	gi|674114364|gb|CP007573.1|787337-789256 gi|198387258|gb|EU722333.1|1933-3852 gi|194268336|gb|EF626941.1|2128-4047
Resfinder	Tet|tet32_1_EU722333|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TET32	tet(32)_1_EU722333
ARG-ANNOT	Bla|TEM-43|U95363|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-43:U95363:1-861:861
CARD	Bla|TEM-43|U95363|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|U95363|0-861|ARO:3000912|TEM-43 [Klebsiella pneumoniae]
Lahey	Bla|TEM-43|U95363|1-861|861|betalactams|Class_A_betalactamases|TEM	AAC32889.2 U95363.2:1-861
NCBI	Bla|TEM-43|U95363|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|11364577|gb|U95363.2|KPU95363|1-861
Resfinder	Bla|TEM-43|U95363|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-43_1_KPU95363
NCBI	Flq|NC_010410.6003186|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|169147133|emb|CU459141.1|924612-927326 gi|88758889|emb|CT025946.2|1-2715
ARG-ANNOT	817|AF036933.1|AF036933|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	(Phe)CatB7:AF036933:177-815:639
NCBI	817|AF036933.1|AF036933|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|974347073|gb|CP008869.1|1013035-1012397 gi|926451317|emb|LN871187.1|4735719-4736357 gi|675286744|emb|HG974234.1|647624-646986 gi|553895034|gb|CP006832.1|780101-779463 gi|553886202|gb|CP006831.1|780101-779463 gi|543879514|gb|CP006705.1|779979-779341 gi|110227054|gb|AE004091.2|780101-779463 gi|4104538|gb|AF036933.1|AF036933|177-815
Resfinder	817|AF036933.1|AF036933|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	catB7_1_AF036933
NCBI	Sul|NC_008702.1.4608834|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|119668705|emb|AM406670.1|1517394-1518215 gi|862570604|emb|HG917972.2|4917158-4917131 gi|442581001|gb|CP003899.1|4811703-4811676 gi|183173361|gb|CP000854.1|5210475-5210448 gi|118568029|gb|CP000325.1|1006418-1006445
ARG-ANNOT	Bla|TEM-42|X98047|1-844|844|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-42:X98047:1-844:844
CARD	Bla|TEM-42|X98047|1-844|844|betalactams|Class_A_betalactamases|TEM	@phgb|X98047|0-844|ARO:3000911|TEM-42 [Pseudomonas aeruginosa]
NCBI	Bla|TEM-42|X98047|1-844|844|betalactams|Class_A_betalactamases|TEM	gi|695209101|ref|NG_035725.1|1-844
NCBI	1058|unknown_id|unknown_name|betalactams|Penicillin_binding_protein|PBP2	gi|478686599|gb|KC601653.1|258-1
CARD	1307|AM412777.1|AM412777|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF445082|2788-3343|ARO:3002577|AAC(6')-Ib4 [Acinetobacter baumannii]
NCBI	1307|AM412777.1|AM412777|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|971493847|gb|CP010351.1|169723-170277 gi|962148162|gb|KT345947.1|21599-22153 gi|953357758|gb|KT290957.1|1183-1737 gi|953357751|gb|KT290956.1|1667-2221 gi|953357745|gb|KT290955.1|1183-1737 gi|953357739|gb|KT290954.1|1183-1737 gi|953357733|gb|KT290953.1|1183-1737 gi|953357725|gb|KT290952.1|1183-1737 gi|953357719|gb|KT290951.1|1183-1737 gi|953357712|gb|KT290950.1|1183-1737
ARG-ANNOT	Bla|SHV-38|GQ407124|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-38:GQ407124:1-861:861
CARD	Bla|SHV-38|GQ407124|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY079099|148-1009|ARO:3001096|SHV-38 [Klebsiella pneumoniae]
Lahey	Bla|SHV-38|GQ407124|1-861|861|betalactams|Class_A_betalactamases|SHV	AAL79576.1 AY079099.1:149-1009
NCBI	Bla|SHV-38|GQ407124|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|257043765|gb|GQ407124.1|1-861 gi|195954365|gb|EU979559.1|57-917 gi|25989459|gb|AY079099.1|149-1009
Resfinder	Bla|SHV-38|GQ407124|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-38_1_EU979559
NCBI	gi|158634575|gb|EU086830.1|betalactams|Class_D_betalactamases|OXA	gi|300687338|gb|CP002025.1|1473197-1472284 gi|158634575|gb|EU086830.1|1-914
NCBI	Gly|VanS-B_1_AF192329|Glycopeptides|VanB-type_regulator|VANSB	gi|695199646|ref|NG_035288.1|24709-26052
Resfinder	Gly|VanS-B_1_AF192329|Glycopeptides|VanB-type_regulator|VANSB	VanS-B_1_AF192329
ARG-ANNOT	Bla|KPC-13|HQ342890|1-882|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-13:HQ342890:1-882:882
Resfinder	Bla|KPC-13|HQ342890|1-882|882|betalactams|Class_A_betalactamases|KPC	blaKPC-13_1_HQ342890
NCBI	Bla|OXA-60_3_AY664504|betalactams|Class_D_betalactamases|OXA	gi|636668380|gb|KJ692398.1|1938-1123 gi|50236430|gb|AY664504.1|1-816
Resfinder	Bla|OXA-60_3_AY664504|betalactams|Class_D_betalactamases|OXA	blaOXA-60_3_AY664504
ARG-ANNOT	Bla|VIM-20|GQ414736|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-20:GQ414736:1-801:801
CARD	Bla|VIM-20|GQ414736|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|GQ414736|0-801|ARO:3002290|VIM-20 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-20|GQ414736|1-801|801|betalactams|Class_B_betalactamases|VIM	ACV13198.1 GQ414736.1:1-801
NCBI	Bla|VIM-20|GQ414736|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|256692864|gb|GQ414736.1|1-801
Resfinder	Bla|VIM-20|GQ414736|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-20_1_GQ414736
ARG-ANNOT	AGly|AadA6|AF140629|61-906|846|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA6:AF140629:61-906:846
CARD	AGly|AadA6|AF140629|61-906|846|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AM087411|1611-2457|ARO:3002606|aadA6 [Pseudomonas aeruginosa]
NCBI	AGly|AadA6|AF140629|61-906|846|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|896690105|gb|KP713392.1|75-920 gi|685837395|dbj|AP014646.1|2548052-2548897 gi|670351331|dbj|AP014622.1|3833043-3833888 gi|659224606|gb|KJ679405.1|2265-3110 gi|470266717|gb|KC170992.1|3456-4301 gi|443417927|emb|HF546976.1|3560-4405 gi|403398199|gb|JX469826.1|29454-30299 gi|402748688|gb|JX195555.1|91-936 gi|388837259|gb|JQ837991.1|597-1442 gi|385277380|gb|JQ629931.1|1995-2840
Resfinder	AGly|AadA6|AF140629|61-906|846|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA6_1_AF140629
ARG-ANNOT	Tet|TetM|U08812|1981-3900|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	(Tet)TetM:U08812:1981-3900:1920
NCBI	Tet|TetM|U08812|1981-3900|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|475983|gb|U08812.1|UUU08812|1981-3900
Resfinder	Tet|TetM|U08812|1981-3900|1920|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_3_U08812
CARD	CARD|phgb|M28303|242-1187|ARO:3003564|EXO|betalactams|Class_A_betalactamases|EXO	@phgb|M28303|242-1187|ARO:3003564|EXO beta-lactamase [Streptomyces albus]
NCBI	CARD|phgb|M28303|242-1187|ARO:3003564|EXO|betalactams|Class_A_betalactamases|EXO	gi|153338|gb|M28303.1|STMLACBG|243-1187
ARG-ANNOT	MLS|ErmE|M11200|284-1396|1146|MLS|23S_rRNA_methyltransferases|ERME	(MLS)ErmE:M11200:284-1396:1146
NCBI	MLS|ErmE|M11200|284-1396|1146|MLS|23S_rRNA_methyltransferases|ERME	gi|152688|gb|M11200.1|SERERME2|284-1396
Resfinder	MLS|ErmE|M11200|284-1396|1146|MLS|23S_rRNA_methyltransferases|ERME	erm(E)_2_M11200
CARD	AGly|U59183.2|gene2|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|U59183|247-859|ARO:3002581|AAC(6')-Ib10 [Pseudomonas aeruginosa]
NCBI	AGly|U59183.2|gene2|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|2393719|gb|U59183.1|PAU59183|248-859
NCBI	Tet|tetH_2_AJ245947|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	gi|695211671|ref|NG_036104.1|1215-2393 gi|695199890|ref|NG_035330.1|986-2164 gi|38224931|gb|AY362554.1|3455-4633 gi|785798809|gb|CP011099.1|1616310-1617480 gi|785795794|gb|CP011098.1|1616287-1617457 gi|678222343|gb|KJ909292.1|5117-6287 gi|575439963|gb|CP006942.1|974729-973559 gi|511255433|gb|KC734562.1|4318-5488 gi|511255399|gb|KC734561.1|3612-2442 gi|511255369|gb|KC734560.1|4418-5588
Resfinder	Tet|tetH_2_AJ245947|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETH	tet(H)_2_AJ245947
ARG-ANNOT	Bla|OCH-4|AJ295342|1-1173|1173|betalactams|Class_C_betalactamases|OCH	(Bla)OCH-4:AJ295342:1-1173:1173
CARD	Bla|OCH-4|AJ295342|1-1173|1173|betalactams|Class_C_betalactamases|OCH	@phgb|AJ295342|0-1173|ARO:3002517|OCH-4 [Ochrobactrum anthropi]
NCBI	Bla|OCH-4|AJ295342|1-1173|1173|betalactams|Class_C_betalactamases|OCH	gi|11544702|emb|AJ295342.1|1-1173
Resfinder	Bla|OCH-4|AJ295342|1-1173|1173|betalactams|Class_C_betalactamases|OCH	blaOCH-4_1_AJ295342
CARD	gi|698174201|gb|KM087855.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087855|0-1140|ARO:3002144|DHA-13 [Morganella morganii]
Lahey	gi|698174201|gb|KM087855.1|betalactams|Class_C_betalactamases|DHA	AIT76108.1 KM087855.1:1-1140
NCBI	gi|698174201|gb|KM087855.1|betalactams|Class_C_betalactamases|DHA	gi|698174201|gb|KM087855.1|1-1140
ARG-ANNOT	AGly|Aph2-dprime-Id|AF016483|131-1036|906|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	(AGly)Aph2''Id:AF016483:131-1036:906
CARD	AGly|Aph2-dprime-Id|AF016483|131-1036|906|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	@phgb|AF016483|0-906|ARO:3002637|APH(2'')-IVa [Enterococcus casseliflavus]
NCBI	AGly|Aph2-dprime-Id|AF016483|131-1036|906|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	gi|3080754|gb|AF016483.1|AF016483|131-1036
Resfinder	AGly|Aph2-dprime-Id|AF016483|131-1036|906|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	aph(2'')-Id_1_AF016483
CARD	Mdr|AB566411.1|gene1|Multi-drug_resistance|Multi-drug_efflux_pumps|QACAB	@phgb|AB566411|0-1545|ARO:3003046|qacA [Staphylococcus aureus]
NCBI	Mdr|AB566411.1|gene1|Multi-drug_resistance|Multi-drug_efflux_pumps|QACAB	gi|695214684|ref|NG_036878.1|1-1545
CARD	Bla|OXA-352_1_KF297581|betalactams|Class_D_betalactamases|OXA	@phgb|KF297581|0-822|ARO:3001539|OXA-352 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-352_1_KF297581|betalactams|Class_D_betalactamases|OXA	AGW83450.1 KF297581.1:1-822
NCBI	Bla|OXA-352_1_KF297581|betalactams|Class_D_betalactamases|OXA	gi|546237215|gb|KF297581.1|1-822
Resfinder	Bla|OXA-352_1_KF297581|betalactams|Class_D_betalactamases|OXA	blaOXA-352_1_KF297581
ARG-ANNOT	Bla|CKO-1|AF477396|1-903|903|betalactams|Class_A_betalactamases|CKO	(Bla)CKO-1:AF477396:1-903:903
NCBI	Bla|CKO-1|AF477396|1-903|903|betalactams|Class_A_betalactamases|CKO	gi|19110886|gb|AF477396.1|1-903
Resfinder	Bla|CKO-1|AF477396|1-903|903|betalactams|Class_A_betalactamases|CKO	blaCKO-1_1_AF477396
ARG-ANNOT	Bla|OXY1-3|AY077482|162-1037|876|betalactams|Class_A_betalactamases|OXY	(Bla)OXY1-3:AY077482:162-1037:876
CARD	Bla|OXY1-3|AY077482|162-1037|876|betalactams|Class_A_betalactamases|OXY	@phgb|AY077482|161-1037|ARO:3002391|OXY-1-3 [Klebsiella oxytoca]
NCBI	Bla|OXY1-3|AY077482|162-1037|876|betalactams|Class_A_betalactamases|OXY	gi|18844705|gb|AY077482.1|162-1037
Resfinder	Bla|OXY1-3|AY077482|162-1037|876|betalactams|Class_A_betalactamases|OXY	blaOXY-1-3_3_AY077482
CARD	gi|757399523|gb|KP050494.1|betalactams|Class_A_betalactamases|SHV	@phgb|KP050494|0-861|ARO:3003156|SHV-189 [Klebsiella pneumoniae]
Lahey	gi|757399523|gb|KP050494.1|betalactams|Class_A_betalactamases|SHV	AJO16047.1 KP050494.1:1-861
NCBI	gi|757399523|gb|KP050494.1|betalactams|Class_A_betalactamases|SHV	gi|757399523|gb|KP050494.1|1-861 gi|14532426|gb|AY036620.1|53-88
ARG-ANNOT	CARD|phgb|M11276|0-1023|ARO:3000594|ErmR|MLS|23S_rRNA_methyltransferases|ERMR	(MLS)ErmR:M11276:333-1355:1023
CARD	CARD|phgb|M11276|0-1023|ARO:3000594|ErmR|MLS|23S_rRNA_methyltransferases|ERMR	@phgb|M11276|0-1023|ARO:3000594|ErmR [Arthrobacter sp.]
NCBI	CARD|phgb|M11276|0-1023|ARO:3000594|ErmR|MLS|23S_rRNA_methyltransferases|ERMR	gi|973193275|gb|CP011502.1|3324541-3325563 gi|59723038|gb|AY623658.2|12450-13472 gi|142203|gb|M11276.1|ARGERMA|333-1355
Resfinder	CARD|phgb|M11276|0-1023|ARO:3000594|ErmR|MLS|23S_rRNA_methyltransferases|ERMR	erm(R)_2_AY623658
ARG-ANNOT	Bla|OKP-A-6|AM051144|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-6:AM051144:1-861:861
CARD	Bla|OKP-A-6|AM051144|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051144|0-861|ARO:3002423|OKP-A-6 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-6|AM051144|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655069|emb|AM051144.1|1-861
Resfinder	Bla|OKP-A-6|AM051144|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-6_1_AM051144
NCBI	Flq|AE016830.1|gene6|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|29350190|gb|AE016830.1|6674-9175 gi|15982566|dbj|AB059405.1|2836-5337
CARD	1457|M16482.1|STMSMK|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	@phgb|X53527|0-819|ARO:3002638|APH(3'')-Ia [Streptomyces griseus]
NCBI	1457|M16482.1|STMSMK|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|47077|emb|X53527.1|1-819 gi|153457|gb|M16482.1|STMSMK|501-1319
Resfinder	1457|M16482.1|STMSMK|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	aph(3'')-Ia_1_M16482
CARD	gi|159160000|gb|EU220745.1|betalactams|Class_D_betalactamases|OXA	@phgb|EU220745|0-786|ARO:3001442|OXA-117 [Acinetobacter baumannii]
NCBI	gi|159160000|gb|EU220745.1|betalactams|Class_D_betalactamases|OXA	gi|159160000|gb|EU220745.1|1-786
Resfinder	gi|159160000|gb|EU220745.1|betalactams|Class_D_betalactamases|OXA	blaOXA-117_2_EU220745
ARG-ANNOT	Bla|OKP-B-10|AM051160|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-10:AM051160:1-861:861
CARD	Bla|OKP-B-10|AM051160|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051160|0-861|ARO:3002443|OKP-B-10 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-10|AM051160|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655099|emb|AM051160.1|1-861
Resfinder	Bla|OKP-B-10|AM051160|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-10_1_AM051160
ARG-ANNOT	gi|329745040|gb|HQ425494.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-196:HQ425494:1-822:822
CARD	gi|329745040|gb|HQ425494.1|betalactams|Class_D_betalactamases|OXA	@phgb|HQ425494|0-822|ARO:3001481|OXA-196 [Acinetobacter nosocomialis]
Lahey	gi|329745040|gb|HQ425494.1|betalactams|Class_D_betalactamases|OXA	AEB98922.1 HQ425494.1:1-822
NCBI	gi|329745040|gb|HQ425494.1|betalactams|Class_D_betalactamases|OXA	gi|329745040|gb|HQ425494.1|1-822
Resfinder	gi|329745040|gb|HQ425494.1|betalactams|Class_D_betalactamases|OXA	blaOXA-196_1_HQ425494
NCBI	gi|50347098|gb|AY661885.1|betalactams|Class_A_betalactamases|SHV	gi|695210936|ref|NG_035980.1|1-946
ARG-ANNOT	Bla|SHV-133|AB551737|15-875|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-133:AB551737:15-875:861
CARD	Bla|SHV-133|AB551737|15-875|861|betalactams|Class_A_betalactamases|SHV	@phgb|AB551737|14-875|ARO:3001177|SHV-133 [Klebsiella pneumoniae]
Lahey	Bla|SHV-133|AB551737|15-875|861|betalactams|Class_A_betalactamases|SHV	BAI94487.1 AB551737.1:15-875
NCBI	Bla|SHV-133|AB551737|15-875|861|betalactams|Class_A_betalactamases|SHV	gi|291621298|dbj|AB551737.1|15-875
Resfinder	Bla|SHV-133|AB551737|15-875|861|betalactams|Class_A_betalactamases|SHV	blaSHV-133_1_AB551737
CARD	Phe|catP_1_U15027|Phenicol|Chloramphenicol_acetyltransferases|CATP	@phgb|U15027|0-624|ARO:3002686|catP [Clostridium perfringens]
NCBI	Phe|catP_1_U15027|Phenicol|Chloramphenicol_acetyltransferases|CATP	gi|349590010|gb|JN689219.1|72683-73306 gi|312386795|dbj|AB562893.1|2915-2292 gi|3132859|gb|U90554.1|SVU90554|5119-4496 gi|669664104|ref|NG_034212.1|3584-4207 gi|3068600|gb|AF031037.1|AF031037|489-1112 gi|551135|gb|U15027.1|CPU15027|2953-3576 gi|208130|gb|M77169.1|SYNCLOSHP|4830-4207 gi|144778|gb|L02937.1|CLOCLSA|4830-4207 gi|144740|gb|M74769.1|CLOCATP|145-768
Resfinder	Phe|catP_1_U15027|Phenicol|Chloramphenicol_acetyltransferases|CATP	catP_1_U15027
ARG-ANNOT	Gly|VanX-Pt2|AY926880|4769-5377|609|Glycopeptides|VanA-type_resistance_protein|VANXA	(Gly)VanX-Pt2:AY926880:4769-5377:609
NCBI	Gly|VanX-Pt2|AY926880|4769-5377|609|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|257412320|gb|AY926880.2|4769-5377
Resfinder	Gly|VanX-Pt2|AY926880|4769-5377|609|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-Pt2_4_AY926880
ARG-ANNOT	Bla|B-12|EF595958|1-750|750|betalactams|Class_B_betalactamases|BLAB	(Bla)B-12:EF595958:1-750:750
NCBI	Bla|B-12|EF595958|1-750|750|betalactams|Class_B_betalactamases|BLAB	gi|148533498|gb|EF595958.1|1-750
Resfinder	Bla|B-12|EF595958|1-750|750|betalactams|Class_B_betalactamases|BLAB	blaB-12_1_EF595958
NCBI	Bac|NC_002695.1.916234|Bacitracin|Undecaprenyl_pyrophosphate_phosphatase|BACA	gi|937297913|gb|CP012802.1|3816149-3815328 gi|734586714|gb|CP010304.1|3963288-3962467 gi|667689599|gb|CP008957.1|4031286-4030465 gi|666001753|gb|CP008805.1|3998549-3997728 gi|386794017|gb|CP001925.1|3871019-3870198 gi|374356928|gb|CP003109.1|3741896-3741075 gi|290760697|gb|CP001846.1|3833413-3832592 gi|254590536|gb|CP001368.1|4002783-4001962 gi|209759327|gb|EU895415.1|1-822 gi|209157093|gb|CP001164.1|4046742-4045921
ARG-ANNOT	1659|JN596280.1|JN596280|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-33:GQ337064:1203-1757:555
CARD	1659|JN596280.1|JN596280|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|JN596280|1202-1757|ARO:3002587|AAC(6')-33 [Escherichia coli]
NCBI	1659|JN596280.1|JN596280|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|374282203|gb|JN596280.1|1203-1757 gi|255039693|gb|GQ337064.1|1203-1757
Resfinder	1659|JN596280.1|JN596280|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-33_1_GQ337064
ARG-ANNOT	Gly|VanX-Ao2|HQ679900|2070-2678|609|Glycopeptides|VanA-type_resistance_protein|VANXA	(Gly)VanX-Ao2:HQ679900:2070-2678:609
NCBI	Gly|VanX-Ao2|HQ679900|2070-2678|609|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|505812666|gb|CP003410.1|1535187-1535795 gi|336445587|gb|HQ679900.1|2070-2678
Resfinder	Gly|VanX-Ao2|HQ679900|2070-2678|609|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-Ao2_9_HQ679900
ARG-ANNOT	AGly|AadA5|AF137361|64-852|789|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA5:AF137361:64-852:789
CARD	AGly|AadA5|AF137361|64-852|789|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AF137361|63-852|ARO:3002605|aadA5 [Escherichia coli]
NCBI	AGly|AadA5|AF137361|64-852|789|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|970698242|gb|KT988020.1|21300-22088 gi|970698221|gb|KT988019.1|6112-6900 gi|970698093|gb|KT988018.1|113786-114574 gi|973715451|gb|CP013836.1|117095-117883 gi|973705327|gb|CP013832.1|15534-14746 gi|971520763|gb|CP008715.1|80776-81564 gi|966344247|gb|KT305945.1|683-1471 gi|966344244|gb|KT305944.1|683-1471 gi|966344241|gb|KT305943.1|675-1463 gi|963329632|gb|KT316805.1|682-1470
Resfinder	AGly|AadA5|AF137361|64-852|789|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA5_1_AF137361
NCBI	gi|591389151|gb|KF986258.1|betalactams|Class_D_betalactamases|OXA	gi|591389151|gb|KF986258.1|1-907
CARD	CARD|phgb|AB028210|2710-3565|ARO:3002544|AAC3-Xa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|AB028210|2710-3565|ARO:3002544|AAC(3)-Xa [Streptomyces griseus]
NCBI	CARD|phgb|AB028210|2710-3565|ARO:3002544|AAC3-Xa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|5002503|dbj|AB028210.1|2711-3566
NCBI	1238|JX131372.1|JX131372|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|401668653|gb|JX131372.1|840-1397
ARG-ANNOT	Bla|CTX-M-22|AY080894|4-879|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-22:AY080894:4-879:876
CARD	Bla|CTX-M-22|AY080894|4-879|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY080894|3-879|ARO:3001884|CTX-M-22 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-22|AY080894|4-879|876|betalactams|Class_A_betalactamases|CTX	AAL86924.1 AY080894.1:4-879
NCBI	Bla|CTX-M-22|AY080894|4-879|876|betalactams|Class_A_betalactamases|CTX	gi|300392842|gb|HM470254.1|1605-2480 gi|695211428|ref|NG_036076.1|1-876 gi|19526203|gb|AY080894.1|4-879
Resfinder	Bla|CTX-M-22|AY080894|4-879|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-22_1_HM470254
CARD	Bla|CMY-65_1_JF780936|betalactams|Class_C_betalactamases|CMY	@phgb|JF780936|63-1209|ARO:3002078|CMY-65 [Citrobacter sp. 913]
Lahey	Bla|CMY-65_1_JF780936|betalactams|Class_C_betalactamases|CMY	AEI52842.1 JF780936.1:64-1209
NCBI	Bla|CMY-65_1_JF780936|betalactams|Class_C_betalactamases|CMY	gi|336318752|gb|JF780936.1|64-1209
Resfinder	Bla|CMY-65_1_JF780936|betalactams|Class_C_betalactamases|CMY	blaCMY-65_1_JF780936
ARG-ANNOT	Bla|CTX-M-40|AY750914|207-1079|873|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-40:AY750914:207-1079:873
CARD	Bla|CTX-M-40|AY750914|207-1079|873|betalactams|Class_A_betalactamases|CTX	@phgb|AY750914|0-873|ARO:3001902|CTX-M-40 [Escherichia coli]
Lahey	Bla|CTX-M-40|AY750914|207-1079|873|betalactams|Class_A_betalactamases|CTX	AAV28215.2 AY750914.2:207-1079
NCBI	Bla|CTX-M-40|AY750914|207-1079|873|betalactams|Class_A_betalactamases|CTX	gi|67462182|gb|AY750914.2|207-1079
Resfinder	Bla|CTX-M-40|AY750914|207-1079|873|betalactams|Class_A_betalactamases|CTX	blaCTX-M-40_1_AY750914
ARG-ANNOT	Gly|VanY-D|AB242319|1958-3025|1068|Glycopeptides|VanD-type_accessory_protein|VANYD	(Gly)VanY-D:AB242319:1958-3025:1068
NCBI	Gly|VanY-D|AB242319|1958-3025|1068|Glycopeptides|VanD-type_accessory_protein|VANYD	gi|109240378|dbj|AB242319.1|1958-3025
Resfinder	Gly|VanY-D|AB242319|1958-3025|1068|Glycopeptides|VanD-type_accessory_protein|VANYD	VanY-D_1_AB242319
ARG-ANNOT	Bla|LEN-12|AJ635406|1-789|789|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-12:AJ635406:1-789:789
CARD	Bla|LEN-12|AJ635406|1-789|789|betalactams|Class_A_betalactamases|LEN	@phgb|AJ635406|0-789|ARO:3002462|LEN-12 [Klebsiella pneumoniae]
NCBI	Bla|LEN-12|AJ635406|1-789|789|betalactams|Class_A_betalactamases|LEN	gi|46309187|emb|AJ635406.1|1-789
Resfinder	Bla|LEN-12|AJ635406|1-789|789|betalactams|Class_A_betalactamases|LEN	blaLEN12_1_AJ635406
ARG-ANNOT	Bla|MOR|Y10283|546-1685|1140|betalactams|Class_C_betalactamases|DHA	(Bla)MOR:Y10283:546-1685:1140
NCBI	Bla|MOR|Y10283|546-1685|1140|betalactams|Class_C_betalactamases|DHA	gi|1781032|emb|Y10283.1|546-1685
Resfinder	Bla|MOR|Y10283|546-1685|1140|betalactams|Class_C_betalactamases|DHA	blaMOR_1_Y10283
ARG-ANNOT	Bla|TEM-178|X97254|154-1011|858|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-178:X97254:154-1011:858
CARD	Bla|TEM-178|X97254|154-1011|858|betalactams|Class_A_betalactamases|TEM	@phgb|X97254|153-1011|ARO:3001043|TEM-178 [Serratia marcescens]
Lahey	Bla|TEM-178|X97254|154-1011|858|betalactams|Class_A_betalactamases|TEM	CAA65888.1 X97254.1:154-1011
NCBI	Bla|TEM-178|X97254|154-1011|858|betalactams|Class_A_betalactamases|TEM	gi|2648042|emb|X97254.1|154-1011
Resfinder	Bla|TEM-178|X97254|154-1011|858|betalactams|Class_A_betalactamases|TEM	blaTEM-178_1_X97254
ARG-ANNOT	Bla|OXA-209|JF268688|5408-6232|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-209:JF268688:5408-6232:825
Lahey	Bla|OXA-209|JF268688|5408-6232|825|betalactams|Class_D_betalactamases|OXA	AEM66528.1 JF268688.1:6232-5408
NCBI	Bla|OXA-209|JF268688|5408-6232|825|betalactams|Class_D_betalactamases|OXA	gi|343916452|gb|JF268688.1|6232-5408
Resfinder	Bla|OXA-209|JF268688|5408-6232|825|betalactams|Class_D_betalactamases|OXA	blaOXA-209_1_JF268688
ARG-ANNOT	Bla|IND-15|AB563173|33-764|732|betalactams|Class_B_betalactamases|IND	(Bla)IND-15:AB563173:33-764:732
CARD	Bla|IND-15|AB563173|33-764|732|betalactams|Class_B_betalactamases|IND	@phgb|AB563173|32-764|ARO:3002270|IND-15 [Chryseobacterium indologenes]
Lahey	Bla|IND-15|AB563173|33-764|732|betalactams|Class_B_betalactamases|IND	BAJ14288.1 AB563173.1:33-764
NCBI	Bla|IND-15|AB563173|33-764|732|betalactams|Class_B_betalactamases|IND	gi|302357573|dbj|AB563173.1|33-764
Resfinder	Bla|IND-15|AB563173|33-764|732|betalactams|Class_B_betalactamases|IND	blaIND-15_1_AB563173
NCBI	707|X04555.1|X04555|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	gi|973585379|gb|KP054476.2|32591-33271 gi|973585379|gb|KP054476.2|28124-28265 gi|973585379|gb|KP054476.2|51695-51836 gi|959190351|gb|CP013324.1|126758-126078 gi|957647579|dbj|AP017302.1|414271-413591 gi|957647579|dbj|AP017302.1|2607581-2607722 gi|828952302|gb|CP011622.1|98143-98823 gi|821346305|dbj|LC054840.1|1119-1799 gi|787862679|gb|CP008707.1|37652-36972 gi|723217920|gb|KM382179.1|3-683 gi|662716992|gb|CP008825.1|138416-139096 gi|662716651|gb|CP008824.1|204619-205299 gi|662716651|gb|CP008824.1|269504-269647 gi|662716651|gb|CP008824.1|54725-54865 gi|662716651|gb|CP008824.1|212958-213076 gi|659224586|gb|KJ668712.1|10-690
CARD	CARD|phgb|D78168|536-1592|ARO:3000206|emrK|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRK	@phgb|D78168|536-1592|ARO:3000206|emrK [Escherichia coli]
NCBI	CARD|phgb|D78168|536-1592|ARO:3000206|emrK|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRK	gi|985000614|gb|CP014225.1|680431-679375 gi|958627747|gb|CP013253.1|932315-933371 gi|939732440|gb|CP011343.2|2464950-2463894 gi|939731527|gb|CP011342.2|2465875-2464819 gi|937526251|gb|CP012870.1|2158425-2159481 gi|937521852|gb|CP012869.1|2158425-2159481 gi|937517453|gb|CP012868.1|2158425-2159481 gi|932857508|emb|LN877770.1|3306961-3305905 gi|923416119|gb|CP011113.1|2446868-2445812 gi|899729770|gb|CP012127.1|2464649-2463593
ARG-ANNOT	Gly|VanSc3|AY033764|1604-5662|1059|Glycopeptides|VanC-type_regulator|VANSC	(Gly)VanSc3:AY033764:4604-5662:1059
NCBI	Gly|VanSc3|AY033764|1604-5662|1059|Glycopeptides|VanC-type_regulator|VANSC	gi|18476137|gb|AY033764.1|4604-5662
CARD	CARD|phgb|AF482691.2|2796-3996|ARO:3003688|PvrR|Multi-drug_resistance|MDR_regulator|PVRR	@phgb|AF482691.2|2796-3996|ARO:3003688|PvrR [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AF482691.2|2796-3996|ARO:3003688|PvrR|Multi-drug_resistance|MDR_regulator|PVRR	gi|974311447|gb|CP008863.1|4794058-4795257 gi|974290783|gb|CP008862.1|3156837-3155638 gi|237651844|gb|AF482691.2|2797-3996 gi|115583796|gb|CP000438.1|5324829-5323630 gi|32481613|gb|AY273869.1|35364-36563
CARD	CARD|phgb|L20573|2064-2676|ARO:3003250|bcrC|Bacitracin|Bacitracin_ABC_transporter|BCRC	@phgb|L20573|2064-2676|ARO:3003250|bcrC [Bacillus licheniformis]
NCBI	CARD|phgb|L20573|2064-2676|ARO:3003250|bcrC|Bacitracin|Bacitracin_ABC_transporter|BCRC	gi|510140713|gb|CP005965.1|2575292-2574680 gi|4464275|gb|AF007865.2|AF007865|48081-48693 gi|466477|gb|L20573.1|BACBCRABC|2065-2677 gi|387912614|gb|JQ315404.1|271-1
ARG-ANNOT	Flq|Qnr-A2|AY675584|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	(Flq)Qnr-A2:AY675584:1-657:657
CARD	Flq|Qnr-A2|AY675584|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	@phgb|HQ449669|0-657|ARO:3002708|QnrA2 [Shewanella algae]
NCBI	Flq|Qnr-A2|AY675584|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	gi|315507134|gb|HQ449669.1|2604-3260 gi|50593098|gb|AY675584.1|1-657
Resfinder	Flq|Qnr-A2|AY675584|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	QnrA2_1_HQ449669
NCBI	Flq|NC_002951.3236187|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|941146344|gb|CP007676.1|7032-9695 gi|941142962|gb|CP007672.1|7032-9695 gi|941139768|gb|CP007657.1|7032-9695 gi|899756207|gb|CP012119.1|1918651-1915988 gi|828461663|gb|CP007674.1|7032-9695 gi|828444881|gb|CP007670.1|7032-9695 gi|640834542|gb|CP007690.1|7032-9695 gi|610395799|gb|CP007539.1|6489-9152 gi|160367075|gb|CP000730.1|7032-9695 gi|150373012|dbj|AP009351.1|7012-9675
CARD	CARD|phgb|AL009126|1376516-1376855|ARO:3003063|ykkC|Multi-drug_resistance|Multi-drug_efflux_pumps|YKKC	@phgb|AL009126|1376516-1376855|ARO:3003063|ykkC [Bacillus subtilis subsp. subtilis str. 168]
NCBI	CARD|phgb|AL009126|1376516-1376855|ARO:3003063|ykkC|Multi-drug_resistance|Multi-drug_efflux_pumps|YKKC	gi|983204966|gb|CP014166.1|1355784-1356123 gi|846133629|gb|CP011882.1|2285923-2286262 gi|811154183|gb|CP011101.1|1353539-1353878 gi|807072327|gb|CP011115.1|1376520-1376859 gi|749183975|gb|CP010314.1|1356009-1356348 gi|728887195|gb|CP010053.1|1376279-1376618 gi|728882887|gb|CP010052.1|1376529-1376868 gi|724425628|emb|LN680001.1|1376494-1376833 gi|723796434|emb|LN649259.1|1376491-1376830 gi|670919138|gb|CP005997.1|1317025-1317364
ARG-ANNOT	Bla|OXA-16|AF043100|1-775|775|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-16:AF043100:1-775:775
CARD	Bla|OXA-16|AF043100|1-775|775|betalactams|Class_D_betalactamases|OXA	@phgb|AF043100|0-774|ARO:3001411|OXA-16 [Pseudomonas aeruginosa]
NCBI	Bla|OXA-16|AF043100|1-775|775|betalactams|Class_D_betalactamases|OXA	gi|2815889|gb|AF043100.1|AF043100|1-775
Resfinder	Bla|OXA-16|AF043100|1-775|775|betalactams|Class_D_betalactamases|OXA	blaOXA-16_1_AF043100
NCBI	gi|3851587|gb|AF093512.1|betalactams|Class_A_betalactamases|TEM	gi|3851587|gb|AF093512.1|AF093512|1-1167
NCBI	1066|unknown_id|unknown_name|MLS|23S_rRNA_methyltransferases|ERMB	gi|695197022|ref|NG_034603.1|8746-8009 gi|1532093|gb|U35228.1|SLU35228|798-1535
Resfinder	1066|unknown_id|unknown_name|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_21_U35228
CARD	CARD|phgb|HQ661362|71-932|ARO:3001168|SHV-121|betalactams|Class_A_betalactamases|SHV	@phgb|HQ661362|71-932|ARO:3001168|SHV-121 [Klebsiella pneumoniae]
NCBI	CARD|phgb|HQ661362|71-932|ARO:3001168|SHV-121|betalactams|Class_A_betalactamases|SHV	gi|338173764|gb|HQ661362.1|72-933 gi|257359514|gb|GQ428198.1|48-909 gi|283135093|dbj|AB538449.1|1-861
ARG-ANNOT	577|M97172.1|SMAAAC3VB|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	(AGly)Aac3-Vb:M97172:656-1465:810
CARD	577|M97172.1|SMAAAC3VB|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|M97172|655-1465|ARO:3002534|AAC(3)-IIb [Serratia marcescens]
NCBI	577|M97172.1|SMAAAC3VB|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|152811|gb|M97172.1|SMAAAC3VB|656-1465
Resfinder	577|M97172.1|SMAAAC3VB|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	aac(3)-IIb_1_M97172
ARG-ANNOT	565|Z48231.1|Z48231|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	(AGly)Sat3:Z48231:221-763:543
CARD	565|Z48231.1|Z48231|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	@phgb|Z48231|220-763|ARO:3002898|sat-3 [Escherichia coli]
NCBI	565|Z48231.1|Z48231|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	gi|1435085|emb|Z74787.1|7509-6967 gi|695197271|ref|NG_034680.1|221-763
CARD	CARD|phgb|NC_002516|2211321-2212512|ARO:3002982|amrA|Multi-drug_resistance|Multi-drug_efflux_pumps|AMRA	@phgb|NC_002516|2211321-2212512|ARO:3002982|amrA [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516|2211321-2212512|ARO:3002982|amrA|Multi-drug_resistance|Multi-drug_efflux_pumps|AMRA	gi|926451317|emb|LN871187.1|3304517-3303326 gi|553895034|gb|CP006832.1|2211317-2212508 gi|553886202|gb|CP006831.1|2211317-2212508 gi|110227054|gb|AE004091.2|2211322-2212513 gi|6502949|gb|AF147719.1|AF147719|2210-1019
ARG-ANNOT	872|DQ022190.1|DQ022190|Glycopeptides|VanC-type_regulator|VANSC	(Gly)VanS-C:DQ022190:4672-5757:1086
NCBI	872|DQ022190.1|DQ022190|Glycopeptides|VanC-type_regulator|VANSC	gi|67479934|gb|DQ022190.1|4672-5757 gi|67479914|gb|DQ015971.1|1-39
Resfinder	872|DQ022190.1|DQ022190|Glycopeptides|VanC-type_regulator|VANSC	VanS-C_2_DQ022190
CARD	CARD|phgb|NC_007779|2586250-2589364|ARO:3000491|acrD|Aminoglycosides|Aminoglycoside_efflux_pumps|ACRD	@phgb|NC_007779|2586250-2589364|ARO:3000491|acrD [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|NC_007779|2586250-2589364|ARO:3000491|acrD|Aminoglycosides|Aminoglycoside_efflux_pumps|ACRD	gi|985000614|gb|CP014225.1|784795-787909 gi|958627747|gb|CP013253.1|834867-831753 gi|939732440|gb|CP011343.2|2562524-2565638 gi|939731527|gb|CP011342.2|2563449-2566563 gi|937526251|gb|CP012870.1|2054061-2050947 gi|937521852|gb|CP012869.1|2054061-2050947 gi|937517453|gb|CP012868.1|2054061-2050947 gi|932857508|emb|LN877770.1|3411403-3414517 gi|923416119|gb|CP011113.1|2544442-2547556 gi|899729770|gb|CP012127.1|2562223-2565337
NCBI	Sul|sul1_16_EF667294|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695212668|ref|NG_036469.1|7392-6553
Lahey	Bla|OXA-51_9_EU255290|betalactams|Class_D_betalactamases|OXA	ABX45060.1 EU255290.1:1-825
NCBI	Bla|OXA-51_9_EU255290|betalactams|Class_D_betalactamases|OXA	gi|160623385|gb|EU255290.1|1-825
Resfinder	Bla|OXA-51_9_EU255290|betalactams|Class_D_betalactamases|OXA	blaOXA-51_9_EU255290
NCBI	gi|595583489|gb|KF992029.1|betalactams|Class_C_betalactamases|ACT	gi|595583489|gb|KF992029.1|647-1894
NCBI	AGly|AF313472.2|gene16|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|676254456|dbj|AP014637.1|1891020-1891856 gi|674651201|dbj|AB852526.1|52495-53331 gi|695212119|ref|NG_036333.1|16397-17233
ARG-ANNOT	MLS|MsrA|AY591760|274-1740|1467|MLS|Macrolide_resistance_efflux_pumps|MSRA	(MLS)MsrA:AY591760:274-1740:1467
NCBI	MLS|MsrA|AY591760|274-1740|1467|MLS|Macrolide_resistance_efflux_pumps|MSRA	gi|549130066|dbj|AP012467.1|14792-16258 gi|74315443|gb|DQ131177.1|291-1757 gi|71534841|gb|DQ068449.1|333-1799 gi|51235131|gb|AY591760.1|274-1740 gi|695199344|ref|NG_035207.1|1962-3428 gi|695199340|ref|NG_035206.1|2005-3471
ARG-ANNOT	Tmt|DfrD|Z50141|94-582|489|Trimethoprim|Dihydrofolate_reductase|DFRD	(Tmt)DfrD:Z50141:94-582:489
NCBI	Tmt|DfrD|Z50141|94-582|489|Trimethoprim|Dihydrofolate_reductase|DFRD	gi|508787714|gb|KC456362.1|6490-6990 gi|1150986|gb|U43152.1|LMU43152|82-582 gi|971588|emb|Z50141.1|82-582 gi|1244654|gb|U40997.1|LMU40997|2177-2677
Resfinder	Tmt|DfrD|Z50141|94-582|489|Trimethoprim|Dihydrofolate_reductase|DFRD	dfrD_1_Z50141
ARG-ANNOT	1260|DQ519086.1|DQ519086|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-91:DQ519086:1199-2023:825
CARD	1260|DQ519086.1|DQ519086|betalactams|Class_D_betalactamases|OXA	@phgb|DQ519086|1198-2023|ARO:3001627|OXA-91 [Acinetobacter baumannii]
Lahey	1260|DQ519086.1|DQ519086|betalactams|Class_D_betalactamases|OXA	ABF47914.1 DQ519086.1:1199-2023
NCBI	1260|DQ519086.1|DQ519086|betalactams|Class_D_betalactamases|OXA	gi|94960145|gb|DQ519086.1|1199-2023
Resfinder	1260|DQ519086.1|DQ519086|betalactams|Class_D_betalactamases|OXA	blaOXA-91_1_DQ519086
NCBI	gi|21541784|gb|AF516720.1|betalactams|Class_A_betalactamases|TEM	gi|21541784|gb|AF516720.1|1-1080 gi|961666360|gb|KT185451.1|87740-87690
NCBI	Gly|VanH-Sc_1_AL939117|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|24427162|emb|AL939117.1|53343-54356
Resfinder	Gly|VanH-Sc_1_AL939117|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-Sc_1_AL939117
CARD	CARD|phgb|JN868721|8-686|ARO:3000834|phoP|Multi-drug_resistance|Multi-drug_efflux_pumps|PHOP|RequiresSNPConfirmation	@phgb|JN868721|8-686|ARO:3000834|phoP [Pseudomonas aeruginosa]
NCBI	CARD|phgb|JN868721|8-686|ARO:3000834|phoP|Multi-drug_resistance|Multi-drug_efflux_pumps|PHOP|RequiresSNPConfirmation	gi|984355403|gb|CP008872.1|4553332-4552655 gi|974353108|gb|CP008870.1|3920078-3919401 gi|974335511|gb|CP008867.1|455015-454338 gi|954630252|gb|CP013245.1|4359664-4360341 gi|946706141|emb|LN870292.1|4195341-4194664 gi|936627386|gb|KT716117.1|1-678 gi|927993303|gb|CP012679.1|4303753-4303076 gi|927226644|gb|CP004054.2|4303753-4303076 gi|881079720|gb|CP012066.1|1615698-1616375 gi|610413304|gb|CP007224.1|4289247-4288570
CARD	CARD|phgb|M55427|273-1119|ARO:3002543|AAC3-IXa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|M55427|273-1119|ARO:3002543|AAC(3)-IXa [Micromonospora chalcea]
NCBI	CARD|phgb|M55427|273-1119|ARO:3002543|AAC3-IXa|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|149874|gb|M55427.1|MPUAACC9|274-1120
CARD	gi|573461058|emb|HG798963.1|betalactams|Class_C_betalactamases|DHA	@phgb|HG798963|0-1140|ARO:3002143|DHA-12 [Proteus mirabilis]
Lahey	gi|573461058|emb|HG798963.1|betalactams|Class_C_betalactamases|DHA	CDL68900.1 HG798963.1:1-1140
NCBI	gi|573461058|emb|HG798963.1|betalactams|Class_C_betalactamases|DHA	gi|573461058|emb|HG798963.1|1-1140
ARG-ANNOT	Gly|VanX-Sc|AL939117|55404-56012|609|Glycopeptides|VanA-type_resistance_protein|VANXA	(Gly)VanX-Sc:AL939117:55404-56012:609
NCBI	Gly|VanX-Sc|AL939117|55404-56012|609|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|14030574|gb|AF367376.1|1-609 gi|24427162|emb|AL939117.1|55404-56012
Resfinder	Gly|VanX-Sc|AL939117|55404-56012|609|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-Sc_1_AL939117
ARG-ANNOT	Gly|VanC1|EU151769|31-1062|1032|Glycopeptides|VanC-type_resistance_protein|VANC	(Gly)VanC1:EU151769:31-1062:1032
NCBI	Gly|VanC1|EU151769|31-1062|1032|Glycopeptides|VanC-type_resistance_protein|VANC	gi|161779892|gb|EU151769.1|31-1062 gi|577156305|gb|KF849246.1|1-495 gi|58045581|gb|AY870596.1|4-430 gi|58045583|gb|AY870597.1|1-402 gi|58045587|gb|AY870599.1|1-387
CARD	CARD|phgb|DQ256091|98-974|ARO:3001943|CTX-M-82|betalactams|Class_A_betalactamases|CTX	@phgb|DQ256091|98-974|ARO:3001943|CTX-M-82 [Escherichia coli]
NCBI	CARD|phgb|DQ256091|98-974|ARO:3001943|CTX-M-82|betalactams|Class_A_betalactamases|CTX	gi|291061254|gb|GU477621.1|243-1119 gi|81238144|gb|DQ256091.1|99-975
CARD	gi|558605698|gb|KF526118.1|betalactams|Class_C_betalactamases|ACT	@phgb|KF526118|0-1146|ARO:3001842|ACT-21 [Enterobacter hormaechei]
Lahey	gi|558605698|gb|KF526118.1|betalactams|Class_C_betalactamases|ACT	AHA80106.1 KF526118.1:1-1146
NCBI	gi|558605698|gb|KF526118.1|betalactams|Class_C_betalactamases|ACT	gi|558605698|gb|KF526118.1|1-1146
CARD	AGly|AY136758.1|gene3|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AY136758|377-947|ARO:3002582|AAC(6')-Ib11 [Salmonella enterica subsp. enterica serovar Typhimurium]
NCBI	AGly|AY136758.1|gene3|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|350995745|gb|JN222799.1|1-570 gi|261347682|gb|GQ924771.1|168-737 gi|695208932|ref|NG_035690.1|378-947 gi|628945896|gb|KJ488983.1|601-1150 gi|358424803|gb|JN412067.1|125-674
CARD	CARD|pvgb|AL123456|2101650-2103042|ARO:3003461|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Isoniazid-resistant_ndh|NDH|RequiresSNPConfirmation	@pvgb|AL123456|2101650-2103042|ARO:3003461|Mycobacterium tuberculosis ndh mutant conferring resistance to isoniazid [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|2101650-2103042|ARO:3003461|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Isoniazid-resistant_ndh|NDH|RequiresSNPConfirmation	gi|984989958|gb|CP010339.1|2099546-2100938 gi|984985728|gb|CP010338.1|2096663-2098055 gi|984981517|gb|CP010337.1|2104391-2105783 gi|984976917|gb|CP010336.1|2084969-2086361 gi|984972452|gb|CP010335.1|2815820-2814428 gi|984967653|gb|CP010334.1|2099540-2100932 gi|984963331|gb|CP010333.1|2105570-2106962 gi|984959134|gb|CP010332.1|2096537-2097929 gi|984950177|gb|CP010330.1|2108610-2110002 gi|984945858|gb|CP010329.1|2101646-2103038
CARD	CARD|phgb|CP006005|1728735-1729668|ARO:3003176|CARB-21|betalactams|Class_A_betalactamases|CARB	@phgb|CP006005|1728735-1729668|ARO:3003176|CARB-21 [Vibrio parahaemolyticus O1:Kuk str. FDA_R31]
NCBI	CARD|phgb|CP006005|1728735-1729668|ARO:3003176|CARB-21|betalactams|Class_A_betalactamases|CARB	gi|523828628|gb|CP006005.1|1728736-1729669
NCBI	Tmt|dfrK_4_FN677369|Trimethoprim|Dihydrofolate_reductase|DFRK	gi|383081523|emb|FR849910.1|3794-4285 gi|302064329|emb|FN677369.2|3839-4330
Resfinder	Tmt|dfrK_4_FN677369|Trimethoprim|Dihydrofolate_reductase|DFRK	dfrK_4_FN677369
CARD	gi|734704269|gb|KM588353.1|betalactams|Class_D_betalactamases|OXA	@phgb|KM588353|0-825|ARO:3003148|OXA-425 [Acinetobacter baumannii]
Lahey	gi|734704269|gb|KM588353.1|betalactams|Class_D_betalactamases|OXA	AJA32743.1 KM588353.1:1-825
NCBI	gi|734704269|gb|KM588353.1|betalactams|Class_D_betalactamases|OXA	gi|734704269|gb|KM588353.1|1-825
ARG-ANNOT	Bla|CMY-12|FR716828|847-1992|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-12:FR716828:847-1992:1146
NCBI	Bla|CMY-12|FR716828|847-1992|1146|betalactams|Class_C_betalactamases|CMY	gi|317449042|emb|FR716828.1|847-1992 gi|2959389|emb|Y16785.1|1-1143
CARD	gi|544207401|gb|KF203101.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF203101|0-822|ARO:3001515|OXA-327 [Acinetobacter calcoaceticus]
Lahey	gi|544207401|gb|KF203101.1|betalactams|Class_D_betalactamases|OXA	AGW16409.1 KF203101.1:1-822
NCBI	gi|544207401|gb|KF203101.1|betalactams|Class_D_betalactamases|OXA	gi|544207401|gb|KF203101.1|1-822
Resfinder	gi|544207401|gb|KF203101.1|betalactams|Class_D_betalactamases|OXA	blaOXA-327_1_KF203101
NCBI	gi|46452173|gb|AY528718.1|betalactams|Class_A_betalactamases|SHV	gi|46452173|gb|AY528718.1|414-1389
CARD	7|AF173226.1|AF173226|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	@phgb|AF173226|3767-6917|ARO:3003052|smeB [Stenotrophomonas maltophilia]
NCBI	7|AF173226.1|AF173226|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	gi|5764623|gb|AF173226.1|3768-6917
CARD	MLS|DQ185434.2|gene1|MLS|Macrolide_glycosyltransferases|MGT	@phgb|DQ185434|0-1257|ARO:3000462|mgt [Streptomyces lividans]
NCBI	MLS|DQ185434.2|gene1|MLS|Macrolide_glycosyltransferases|MGT	gi|672367150|gb|CP009124.1|1767189-1765933 gi|98991151|gb|DQ185434.2|1-1257 gi|24413894|emb|AL939126.1|104605-105861
NCBI	Tet|tetM_7_FN433596|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|985632614|gb|CP012480.1|997947-996028 gi|974161314|gb|CP012018.1|455470-457389 gi|974158397|gb|CP012015.1|455557-457476 gi|974152716|gb|CP012012.1|455763-457682 gi|827385634|gb|CP007686.1|1140317-1142236 gi|675299197|gb|KM015350.1|2229-310 gi|606215985|emb|HG939456.1|932467-930548 gi|554590848|gb|CP006838.1|441732-443651 gi|488461440|emb|HF930766.1|4147-6066 gi|329312723|gb|CP002643.1|427033-428952
Resfinder	Tet|tetM_7_FN433596|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_7_FN433596
CARD	15|AJ252200.1|AJ252200|Multi-drug_resistance|Multi-drug_efflux_pumps|HLYD	@phgb|AJ252200|81-1266|ARO:3003055|smeD [Stenotrophomonas maltophilia]
NCBI	15|AJ252200.1|AJ252200|Multi-drug_resistance|Multi-drug_efflux_pumps|HLYD	gi|384076029|emb|HE798556.1|4098920-4097736 gi|11071582|emb|AJ252200.1|82-1266
CARD	CARD|pvgb|AE000516|1908741-1909548|ARO:3003445|Mycobacterium|Aminoglycosides|Aminoglycoside-resistant_16S-23S_rRNA_O-methyltransferases|TLYA|RequiresSNPConfirmation	@pvgb|AE000516|1908741-1909548|ARO:3003445|Mycobacterium tuberculosis tlyA mutations conferring resistance to aminoglycosides [Mycobacterium tuberculosis CDC1551]
NCBI	CARD|pvgb|AE000516|1908741-1909548|ARO:3003445|Mycobacterium|Aminoglycosides|Aminoglycoside-resistant_16S-23S_rRNA_O-methyltransferases|TLYA|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|1927484-1928291 gi|984989958|gb|CP010339.1|1910716-1911523 gi|984985728|gb|CP010338.1|1914930-1915737 gi|984981517|gb|CP010337.1|1923619-1924426 gi|984976917|gb|CP010336.1|1908651-1909458 gi|984972452|gb|CP010335.1|2989413-2988606 gi|984967653|gb|CP010334.1|1908833-1909640 gi|984963331|gb|CP010333.1|1920823-1921630 gi|984959134|gb|CP010332.1|1907774-1908581 gi|984954355|gb|CP010331.1|1893866-1894673
NCBI	185|KF823969.1|KF823969|Glycopeptides|VanB-type_regulator|VANSB	gi|577698901|gb|KF823969.1|976-2340
ARG-ANNOT	Bla|VEB-3|AY536519|38-937|900|betalactams|Class_A_betalactamases|VEB	(Bla)VEB-3:AY536519:38-937:900
CARD	Bla|VEB-3|AY536519|38-937|900|betalactams|Class_A_betalactamases|VEB	@phgb|AY536519|37-937|ARO:3002372|VEB-3 [Enterobacter cloacae]
Lahey	Bla|VEB-3|AY536519|38-937|900|betalactams|Class_A_betalactamases|VEB	AAS48620.1 AY536519.1:38-937
NCBI	Bla|VEB-3|AY536519|38-937|900|betalactams|Class_A_betalactamases|VEB	gi|530347473|gb|CP006657.1|152735-153634 gi|695214579|ref|NG_036847.1|6010-5111 gi|44894130|gb|AY536519.1|38-937
Resfinder	Bla|VEB-3|AY536519|38-937|900|betalactams|Class_A_betalactamases|VEB	blaVEB-3_1_AY536519
CARD	CARD|phgb|GQ205627|1393-2971|ARO:3002832|vgaD|MLS|Streptogramin_A_efflux_pumps|VGAD	@phgb|GQ205627|1393-2971|ARO:3002832|vgaD [Enterococcus faecium]
NCBI	CARD|phgb|GQ205627|1393-2971|ARO:3002832|vgaD|MLS|Streptogramin_A_efflux_pumps|VGAD	gi|262340498|gb|GQ205627.2|1394-2972 gi|262340498|gb|GQ205627.2|5651-5695
NCBI	gi|817490722|gb|KP264125.1|betalactams|Class_D_betalactamases|OXA	gi|817490722|gb|KP264125.1|1-1048
NCBI	Tet|tet38_2_FN433596|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET38	gi|657154530|gb|CP007447.1|133410-134762 gi|554590848|gb|CP006838.1|160631-161983 gi|532126991|gb|CP002388.1|99787-101139 gi|329312723|gb|CP002643.1|127481-128833 gi|302749911|gb|CP002120.1|130541-131893 gi|269939526|emb|FN433596.1|162179-163531
NCBI	ACou|CP000034.1|gene3210|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|81239530|gb|CP000034.1|2972143-2974035
ARG-ANNOT	Phe|CatB3|AJ009818|883-1515|633|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	(Phe)CatB3:AJ009818:883-1515:633
NCBI	Phe|CatB3|AJ009818|883-1515|633|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|695211932|ref|NG_036293.1|985-1617 gi|89213668|gb|DQ402097.1|700-1332 gi|51036216|dbj|AB186118.1|703-1335 gi|695208285|ref|NG_035514.1|2329-2961 gi|695198655|ref|NG_035052.1|883-1515
Resfinder	Phe|CatB3|AJ009818|883-1515|633|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	catB3_1_AJ009818
ARG-ANNOT	Bla|CEPA-49|U05886|404-1306|903|betalactams|Class_A_betalactamases|CEPA	(Bla)CEPA-49:U05886:404-1306:903
NCBI	Bla|CEPA-49|U05886|404-1306|903|betalactams|Class_A_betalactamases|CEPA	gi|307075846|emb|FR688017.1|1-903 gi|458306|gb|U05886.1|BFU05886|404-1306
Resfinder	Bla|CEPA-49|U05886|404-1306|903|betalactams|Class_A_betalactamases|CEPA	cepA-49_1_U05886
NCBI	Bla|NC_008702.1.4607594|betalactams|Mutant_porin_proteins|OMPR	gi|119668705|emb|AM406670.1|3025977-3026735
ARG-ANNOT	gi|148913114|gb|EF622224.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-31:EF622224:1-1146:1146
CARD	gi|148913114|gb|EF622224.1|betalactams|Class_C_betalactamases|CMY	@phgb|EF622224|0-1146|ARO:3002042|CMY-31 [Klebsiella pneumoniae];@phgb|NC_010259|2374-3520|ARO:3003721|ampC [Salmonella enterica subsp. enterica serovar Newport]
Lahey	gi|148913114|gb|EF622224.1|betalactams|Class_C_betalactamases|CMY	ABR18736.1 EF622224.1:1-1146
NCBI	gi|148913114|gb|EF622224.1|betalactams|Class_C_betalactamases|CMY	gi|164470418|gb|EU331425.1|2375-3520 gi|148913114|gb|EF622224.1|1-1146
Resfinder	gi|148913114|gb|EF622224.1|betalactams|Class_C_betalactamases|CMY	blaCMY-31_1_EU331425
CARD	CARD|phgb|FJ349556|1672-2785|ARO:3002939|vanSM|Glycopeptides|VanM-type_regulator|VANSM	@phgb|FJ349556|1672-2785|ARO:3002939|vanSM [Enterococcus faecium]
NCBI	CARD|phgb|FJ349556|1672-2785|ARO:3002939|vanSM|Glycopeptides|VanM-type_regulator|VANSM	gi|220901852|gb|FJ349556.1|1673-2786
NCBI	gi|16798371|gb|AF427128.1|betalactams|Class_A_betalactamases|TEM	gi|16798371|gb|AF427128.1|AF427128|1-1103
NCBI	AGly|sph_1_HQ424461|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|312191072|gb|HQ424461.1|18-830
Resfinder	AGly|sph_1_HQ424461|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	sph_1_HQ424461
NCBI	Bla|L07945.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|784887|gb|L07945.1|PSEBLAOXA3|18-888
ARG-ANNOT	Tmt|Dfr32|GU067642|535-1008|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)Dfr32:GU067642:535-1008:474
NCBI	Tmt|Dfr32|GU067642|535-1008|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|828958486|gb|CP011628.1|8157-8630 gi|636631824|gb|KJ543558.1|163-636 gi|556826137|gb|KF386161.1|46-519 gi|429138632|gb|JX867129.1|579-1052 gi|297578519|gb|GU726907.1|86-559 gi|269927222|gb|GU067642.1|535-1008
Resfinder	Tmt|Dfr32|GU067642|535-1008|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA32_1_GU067642
CARD	CARD|phgb|D78168|1591-3130|ARO:3000254|emrY|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRY	@phgb|D78168|1591-3130|ARO:3000254|emrY [Escherichia coli]
NCBI	CARD|phgb|D78168|1591-3130|ARO:3000254|emrY|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRY	gi|1060875|dbj|D78168.1|ECOEMRK|1592-3131
NCBI	Flq|NC_011595.7058445|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|939559781|gb|CP012952.1|1020345-1023059 gi|787858845|gb|CP008706.1|968423-971137 gi|213985689|gb|CP001172.1|926712-929426
NCBI	gi|6137225|gb|AF189721.1|betalactams|Class_A_betalactamases|CTX	gi|970697631|gb|KT935446.1|131552-132735 gi|695199311|ref|NG_035199.1|1-1184 gi|288872162|dbj|AB543595.1|1019-2157 gi|958572031|gb|KT001474.1|1591-2696 gi|958571981|gb|KT001472.1|1575-2680 gi|958571965|gb|KT001471.1|1571-2676 gi|958572015|gb|KT001473.1|1574-2663 gi|573008382|emb|HG798900.1|1-876
NCBI	Elf|CP001485.1|gene264|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|939204655|gb|CP006947.1|2789549-2788365 gi|861210305|gb|CP007653.1|259163-260347 gi|785752771|gb|CP009042.1|380504-381688 gi|695931389|gb|CP007634.1|2806446-2807630 gi|378793418|gb|CP003330.1|381772-382956 gi|229368777|gb|CP001485.1|258480-257296 gi|227011820|gb|CP001235.1|431194-432378 gi|227008125|gb|CP001233.1|366487-367671 gi|146314918|gb|CP000627.1|2923846-2925030 gi|12057212|gb|AE003852.1|381760-382944
ARG-ANNOT	Bla|TEM-81|AF427127|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-81:AF427127:209-1069:861
CARD	Bla|TEM-81|AF427127|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF427127|208-1069|ARO:3000948|TEM-81 [Escherichia coli]
Lahey	Bla|TEM-81|AF427127|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAL29433.1 AF427127.1:209-1069
NCBI	Bla|TEM-81|AF427127|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|16798369|gb|AF427127.1|AF427127|209-1069
Resfinder	Bla|TEM-81|AF427127|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-81_1_AF427127
ARG-ANNOT	Bla|SHV-149|JX121116|1-858|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-149:JX121116:1-858:858
CARD	Bla|SHV-149|JX121116|1-858|858|betalactams|Class_A_betalactamases|SHV	@phgb|JX121116|0-858|ARO:3001188|SHV-149 [Klebsiella pneumoniae]
Lahey	Bla|SHV-149|JX121116|1-858|858|betalactams|Class_A_betalactamases|SHV	AFQ23955.1 JX121116.1:1-858
NCBI	Bla|SHV-149|JX121116|1-858|858|betalactams|Class_A_betalactamases|SHV	gi|401871156|gb|JX121116.1|1-858
Resfinder	Bla|SHV-149|JX121116|1-858|858|betalactams|Class_A_betalactamases|SHV	blaSHV-149_1_JX121116
ARG-ANNOT	gi|61741614|gb|AY954516.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-39:AY954516:1-876:876
CARD	gi|61741614|gb|AY954516.1|betalactams|Class_A_betalactamases|CTX	@phgb|AY954516|0-876|ARO:3001901|CTX-M-39 [Escherichia coli]
Lahey	gi|61741614|gb|AY954516.1|betalactams|Class_A_betalactamases|CTX	AAX54694.1 AY954516.1:1-876
NCBI	gi|61741614|gb|AY954516.1|betalactams|Class_A_betalactamases|CTX	gi|825088250|gb|KP975074.1|92708-91833 gi|61741614|gb|AY954516.1|1-876
Resfinder	gi|61741614|gb|AY954516.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-39_1_AY954516
NCBI	gi|19526203|gb|AY080894.1|betalactams|Class_A_betalactamases|CTX	gi|300392842|gb|HM470254.1|1602-2492 gi|19526203|gb|AY080894.1|1-891
ARG-ANNOT	Bla|OXA-7|X75562|135-935|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-7:X75562:135-935:801
CARD	Bla|OXA-7|X75562|135-935|801|betalactams|Class_D_betalactamases|OXA	@phgb|X75562|134-935|ARO:3001402|OXA-7 [Escherichia coli]
Lahey	Bla|OXA-7|X75562|135-935|801|betalactams|Class_D_betalactamases|OXA	CAA53242.1 X75562.1:135-935
NCBI	Bla|OXA-7|X75562|135-935|801|betalactams|Class_D_betalactamases|OXA	gi|516188|emb|X75562.1|135-935
Resfinder	Bla|OXA-7|X75562|135-935|801|betalactams|Class_D_betalactamases|OXA	blaOXA-7_1_X75562
NCBI	Tet|tetM_13_AM990992|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|974999704|gb|CP013994.1|1048959-1050878 gi|961586173|gb|CP013621.1|983024-984943 gi|961572904|gb|CP013619.1|966863-968782 gi|961570270|gb|CP013616.1|939354-941273 gi|955670971|gb|CP013202.1|619120-621039 gi|827409863|gb|CP010867.1|595588-597507 gi|507581572|emb|HF952104.1|595380-597299 gi|442768434|gb|JX120102.1|17332-15413 gi|404438823|gb|CP003808.1|980074-981993 gi|283469229|emb|AM990992.1|1001761-1003680
Resfinder	Tet|tetM_13_AM990992|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_13_AM990992
ARG-ANNOT	749|AY618461.1|AY618461|Glycopeptides|VanA-type_resistance_protein|VANHA	(Gly)VanH-Ac2:AY618461:1-714:714
NCBI	749|AY618461.1|AY618461|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|47834366|gb|AY618461.1|1-714
Resfinder	749|AY618461.1|AY618461|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-Ac2_7_AY618461
ARG-ANNOT	AGly|Aph9-Ia|U94857|151-1146|996|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	(AGly)Aph9-Ia:U94857:151-1146:996
CARD	AGly|Aph9-Ia|U94857|151-1146|996|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	@phgb|U94857|0-996|ARO:3002662|APH(9)-Ia [Legionella pneumophila 130b]
NCBI	AGly|Aph9-Ia|U94857|151-1146|996|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	gi|2145189|gb|U94857.1|LPU94857|151-1146
Resfinder	AGly|Aph9-Ia|U94857|151-1146|996|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH9	aph(9)-Ia_1_U94857
CARD	Bla|TEM-209_1_KF240808|betalactams|Class_A_betalactamases|TEM	@phgb|KF240808|0-861|ARO:3001386|TEM-209 [Klebsiella pneumoniae]
Lahey	Bla|TEM-209_1_KF240808|betalactams|Class_A_betalactamases|TEM	AGW25367.1 KF240808.1:1-861
NCBI	Bla|TEM-209_1_KF240808|betalactams|Class_A_betalactamases|TEM	gi|544598943|gb|KF240808.1|1-861
Resfinder	Bla|TEM-209_1_KF240808|betalactams|Class_A_betalactamases|TEM	blaTEM-209_1_KF240808
CARD	Bla|CTX-M-58_1_EF210159|betalactams|Class_A_betalactamases|CTX	@phgb|EF210159|0-876|ARO:3001919|CTX-M-58 [Escherichia coli]
Lahey	Bla|CTX-M-58_1_EF210159|betalactams|Class_A_betalactamases|CTX	ABM97538.1 EF210159.1:1-876
NCBI	Bla|CTX-M-58_1_EF210159|betalactams|Class_A_betalactamases|CTX	gi|124263631|gb|EF210159.1|1-876
Resfinder	Bla|CTX-M-58_1_EF210159|betalactams|Class_A_betalactamases|CTX	blaCTX-M-58_1_EF210159
ARG-ANNOT	Bla|KPC-15|KC433553|1-882|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-15:KC433553:1-882:882
CARD	Bla|KPC-15|KC433553|1-882|882|betalactams|Class_A_betalactamases|KPC	@phgb|KC433553|0-882|ARO:3002325|KPC-15 [Klebsiella pneumoniae]
Lahey	Bla|KPC-15|KC433553|1-882|882|betalactams|Class_A_betalactamases|KPC	AGF70638.1 KC433553.1:1-882
NCBI	Bla|KPC-15|KC433553|1-882|882|betalactams|Class_A_betalactamases|KPC	gi|451824560|gb|KC433553.1|1-882
Resfinder	Bla|KPC-15|KC433553|1-882|882|betalactams|Class_A_betalactamases|KPC	blaKPC-15_1_KC433553
NCBI	Gly|VanH-Pt_5_DQ018711|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|66731642|gb|DQ018711.1|3168-4136
Resfinder	Gly|VanH-Pt_5_DQ018711|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-Pt_5_DQ018711
NCBI	gi|358009202|gb|JN227085.1|betalactams|Class_A_betalactamases|CTX	gi|695225979|ref|NG_041449.1|1-1414
ARG-ANNOT	gi|26278934|gb|AY150585.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-39:AY150585:1=285:285
CARD	gi|26278934|gb|AY150585.1|betalactams|Class_A_betalactamases|SHV	@phgb|AY150585|0-285|ARO:3001097|SHV-39 [Klebsiella pneumoniae]
NCBI	gi|26278934|gb|AY150585.1|betalactams|Class_A_betalactamases|SHV	gi|26278934|gb|AY150585.1|1-285 gi|675218243|emb|FO818745.1|21620-21339 gi|401871164|gb|JX121120.1|502-783 gi|401871162|gb|JX121119.1|502-783 gi|396076799|gb|JX268630.1|502-783 gi|295917911|gb|GU732836.1|514-795 gi|262477942|gb|GU064394.1|502-783 gi|257043749|gb|GQ407116.1|502-783 gi|191174841|emb|AM988779.1|1164-1445 gi|94502808|gb|DQ478685.1|423-704
NCBI	Flq|NC_002745.1122777|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|984671414|emb|LT009690.1|6489-9158 gi|927048389|gb|CP010890.1|7005-9674 gi|925190036|gb|CP012593.1|7005-9674 gi|595636499|gb|CP007454.1|1109826-1107157 gi|262073980|gb|CP001781.1|7005-9674 gi|47118324|dbj|BA000018.3|7005-9674
ARG-ANNOT	AGly|Aac6-Iu|AF031329|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iu:AF031329:1-441:441
CARD	AGly|Aac6-Iu|AF031329|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF031329|0-441|ARO:3002565|AAC(6')-Iu [Acinetobacter genomosp. 17BJ]
NCBI	AGly|Aac6-Iu|AF031329|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|2909810|gb|AF031329.1|1-441
Resfinder	AGly|Aac6-Iu|AF031329|1-441|441|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iu_1_AF031329
CARD	CARD|phgb|CP000034|2662758-2663289|ARO:3000516|emrR|Multi-drug_resistance|MDR_regulator|EMRR	@phgb|CP000034|2662758-2663289|ARO:3000516|emrR [Shigella dysenteriae Sd197]
NCBI	CARD|phgb|CP000034|2662758-2663289|ARO:3000516|emrR|Multi-drug_resistance|MDR_regulator|EMRR	gi|558570689|gb|CP006736.1|2615540-2616071 gi|81239530|gb|CP000034.1|2662759-2663290
NCBI	Bla|blahRAHN-1_1_GU645205|betalactams|Class_A_betalactamases|RAHN	gi|308390286|gb|GU645205.1|966-1853 gi|295822230|gb|GU584924.1|1-655 gi|557668350|gb|KF484007.1|1-477
Resfinder	Bla|blahRAHN-1_1_GU645205|betalactams|Class_A_betalactamases|RAHN	blaRAHN-1_1_GU645205
NCBI	gi|61967135|gb|AY956335.1|betalactams|Class_A_betalactamases|TEM	gi|695211426|ref|NG_036075.1|1-941
ARG-ANNOT	674|AF181950.1|AF181950|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	(AGly)AadD:AF181950:3176-3946:771
NCBI	674|AF181950.1|AF181950|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	gi|695199814|ref|NG_035309.1|3176-3946
Resfinder	674|AF181950.1|AF181950|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT4-PRIME	aadD_1_AF181950
NCBI	Rif|CP001918.1|gene250|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|295054830|gb|CP001918.1|240347-244375
ARG-ANNOT	Bla|TEM-77|AF190695|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-77:AF190695:209-1069:861
CARD	Bla|TEM-77|AF190695|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF190695|208-1069|ARO:3000939|TEM-73 [Escherichia coli]
Lahey	Bla|TEM-77|AF190695|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAF05614.1 AF190695.1:209-1069
NCBI	Bla|TEM-77|AF190695|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|6176547|gb|AF190695.1|AF190695|209-1069
Resfinder	Bla|TEM-77|AF190695|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-77_1_AF190695
ARG-ANNOT	Bla|SHV-1_18_FJ668818|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-1:AF148850:6-866:861
Lahey	Bla|SHV-1_18_FJ668818|betalactams|Class_A_betalactamases|SHV	AAD37412.1 AF148850.1:6-866
NCBI	Bla|SHV-1_18_FJ668818|betalactams|Class_A_betalactamases|SHV	gi|562889800|gb|KF585134.1|48-908 gi|695220752|ref|NG_039547.1|77-937 gi|133905277|gb|CP000603.1|142440-141580 gi|94502885|gb|DQ478720.1|1-861 gi|5002311|gb|AF148850.1|AF148850|6-866 gi|4337047|gb|AF124984.1|AF124984|199-1059
Resfinder	Bla|SHV-1_18_FJ668818|betalactams|Class_A_betalactamases|SHV	blaSHV-1_18_FJ668818
NCBI	Flq|CP001485.1|gene2164|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|657184927|dbj|AP014524.1|1179549-1182233 gi|378793418|gb|CP003330.1|1327232-1329916 gi|229368777|gb|CP001485.1|2333593-2330909 gi|227011820|gb|CP001235.1|1420096-1422780 gi|227008125|gb|CP001233.1|1287646-1290330 gi|146314918|gb|CP000627.1|888677-891361 gi|12057212|gb|AE003852.1|1330207-1332891 gi|109704606|gb|DQ774257.1|1-2683
NCBI	Tet|tetA_2_X00006|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|2343035|gb|U75324.1|CVU75324|610-1809 gi|2576384|gb|U82001.1|EVU82001|3792-4991 gi|42508|emb|X00006.1|1328-2527
Resfinder	Tet|tetA_2_X00006|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tet(A)_2_X00006
ARG-ANNOT	1317|JF800667.1|JF800667|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-205:JF800667:658-1458:801
CARD	1317|JF800667.1|JF800667|betalactams|Class_D_betalactamases|OXA	@phgb|JF800667|657-1458|ARO:3001483|OXA-205 [Pseudomonas aeruginosa]
Lahey	1317|JF800667.1|JF800667|betalactams|Class_D_betalactamases|OXA	AEO92079.1 JF800667.1:658-1458
NCBI	1317|JF800667.1|JF800667|betalactams|Class_D_betalactamases|OXA	gi|347438904|gb|JF800667.1|658-1458
Resfinder	1317|JF800667.1|JF800667|betalactams|Class_D_betalactamases|OXA	blaOXA-205_1_JF800667
ARG-ANNOT	Bla|IMP-37|JX131372|97-843|747|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-37:JX131372:97-843:747
CARD	Bla|IMP-37|JX131372|97-843|747|betalactams|Class_B_betalactamases|IMP	@phgb|JX131372|96-843|ARO:3002228|IMP-37 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-37|JX131372|97-843|747|betalactams|Class_B_betalactamases|IMP	AFP97028.1 JX131372.1:97-843
NCBI	Bla|IMP-37|JX131372|97-843|747|betalactams|Class_B_betalactamases|IMP	gi|401668653|gb|JX131372.1|97-843
Resfinder	Bla|IMP-37|JX131372|97-843|747|betalactams|Class_B_betalactamases|IMP	blaIMP-37_1_JX131372
ARG-ANNOT	Phe|CatA8|NC_009751|21916-22563|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	(Phe)CatA8:NC_009751:21916-22563:648
NCBI	Phe|CatA8|NC_009751|21916-22563|648|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|395628547|gb|JQ922409.1|93-740 gi|2467210|emb|X92946.1|22563-21916
NCBI	Mdr|NC_003112.2.903386|Multi-drug_resistance|Multi-drug_efflux_pumps|MTRC	gi|325199235|gb|CP002420.1|534833-536071 gi|66731897|gb|AE002098.2|1796420-1795182
CARD	CARD|phgb|AF117746|0-780|ARO:3001080|SHV-22|betalactams|Class_A_betalactamases|SHV	@phgb|AF117746|0-780|ARO:3001080|SHV-22 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF117746|0-780|ARO:3001080|SHV-22|betalactams|Class_A_betalactamases|SHV	gi|6979153|gb|AF117746.1|AF117746|1-780
ARG-ANNOT	Bla|OXA-192|JF273470|1-810|810|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-192:JF273470:1-810:810
CARD	Bla|OXA-192|JF273470|1-810|810|betalactams|Class_D_betalactamases|OXA	@phgb|JF273470|0-810|ARO:3001766|OXA-192 [Brachyspira pilosicoli]
Lahey	Bla|OXA-192|JF273470|1-810|810|betalactams|Class_D_betalactamases|OXA	ADZ54048.1 JF273470.1:1-810
NCBI	Bla|OXA-192|JF273470|1-810|810|betalactams|Class_D_betalactamases|OXA	gi|326322103|gb|JF273470.1|1-810
Resfinder	Bla|OXA-192|JF273470|1-810|810|betalactams|Class_D_betalactamases|OXA	blaOXA-192_1_JF273470
NCBI	Met|nimD_1_X76949|Metronidazole|nim_nitroimidazole_reductase|NIMD	gi|440383|emb|X76949.1|1549-2043
Resfinder	Met|nimD_1_X76949|Metronidazole|nim_nitroimidazole_reductase|NIMD	nimD_1_X76949
ARG-ANNOT	Bla|ACT-14|JX440354|757-1902|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-14:JX440354:757-1902:1146
CARD	Bla|ACT-14|JX440354|757-1902|1146|betalactams|Class_C_betalactamases|ACT	@phgb|JX440354|756-1902|ARO:3001836|ACT-14 [Enterobacter cloacae]
Lahey	Bla|ACT-14|JX440354|757-1902|1146|betalactams|Class_C_betalactamases|ACT	AFU25647.1 JX440354.1:757-1902
NCBI	Bla|ACT-14|JX440354|757-1902|1146|betalactams|Class_C_betalactamases|ACT	gi|407731530|gb|JX440354.1|757-1902
Resfinder	Bla|ACT-14|JX440354|757-1902|1146|betalactams|Class_C_betalactamases|ACT	blaACT-14_1_JX440354
ARG-ANNOT	Bla|TEM-79|AF190692|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-79:AF190692:209-1069:861
CARD	Bla|TEM-79|AF190692|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF190692|208-1069|ARO:3000946|TEM-79 [Escherichia coli]
Lahey	Bla|TEM-79|AF190692|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAF05611.1 AF190692.1:209-1069
NCBI	Bla|TEM-79|AF190692|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|6176541|gb|AF190692.1|AF190692|209-1069
Resfinder	Bla|TEM-79|AF190692|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-79_1_AF190692
CARD	CARD|phgb|JN790863|232-1108|ARO:3001981|CTX-M-122|betalactams|Class_A_betalactamases|CTX	@phgb|JN790863|232-1108|ARO:3001981|CTX-M-122 [Escherichia coli]
NCBI	CARD|phgb|JN790863|232-1108|ARO:3001981|CTX-M-122|betalactams|Class_A_betalactamases|CTX	gi|375313994|gb|JN790863.1|233-1109
CARD	1120|M55547.1|TRNTAAB|betalactams|Class_D_betalactamases|OXA	@phgb|M55547|0-825|ARO:3001404|OXA-9 [Klebsiella pneumoniae]
Lahey	1120|M55547.1|TRNTAAB|betalactams|Class_D_betalactamases|OXA	AAA98406.2 M55547.1:2314-3138
NCBI	1120|M55547.1|TRNTAAB|betalactams|Class_D_betalactamases|OXA	gi|943457735|gb|KT818627.1|73384-72560 gi|943457735|gb|KT818627.1|134975-134151 gi|959195734|gb|CP013326.1|59267-58443 gi|959190351|gb|CP013324.1|108721-107897 gi|902611595|gb|CP011978.1|72460-73284 gi|828971542|gb|CP011645.1|72498-73322 gi|828965729|gb|CP011639.1|7561-6737 gi|828952302|gb|CP011622.1|126191-127015 gi|828952208|gb|CP011621.1|59267-58443 gi|800908878|gb|KP345882.1|49088-49912 gi|758961176|gb|CP010881.1|23965-23141
ARG-ANNOT	Flq|QnrB10|DQ631414|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB10:DQ631414:37-681:645
CARD	Flq|QnrB10|DQ631414|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|DQ631414|0-681|ARO:3002724|QnrB10 [Citrobacter freundii]
NCBI	Flq|QnrB10|DQ631414|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|157168020|gb|EF636461.1|12267-11587 gi|156788182|gb|EU052800.1|10102-9422 gi|156621295|gb|EU091084.1|10094-9414 gi|695211896|ref|NG_036286.1|1-681
Resfinder	Flq|QnrB10|DQ631414|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB10_1_DQ631414
ARG-ANNOT	903|AJ972619.1|AJ972619|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)Dfr24:AJ972619:83-640:558
CARD	903|AJ972619.1|AJ972619|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|AJ972619|82-640|ARO:3002856|dfrA24 [Escherichia coli]
NCBI	903|AJ972619.1|AJ972619|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|74268792|emb|AJ972619.1|83-640
Resfinder	903|AJ972619.1|AJ972619|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA24_1_AJ972619
CARD	CARD|pvgb|NC_003923|1278585-1279164|ARO:3003323|Staphylococcus|Lipopeptides|Daptomycin-resistant_pgsA|PGSA|RequiresSNPConfirmation	@pvgb|NC_003923|1278585-1279164|ARO:3003323|Staphylococcus aureus pgsA mutations conferring resistance to daptomycin [Staphylococcus aureus subsp. aureus MW2]
NCBI	CARD|pvgb|NC_003923|1278585-1279164|ARO:3003323|Staphylococcus|Lipopeptides|Daptomycin-resistant_pgsA|PGSA|RequiresSNPConfirmation	gi|974161314|gb|CP012018.1|1380511-1381090 gi|974158397|gb|CP012015.1|1381246-1381825 gi|974155539|gb|CP012013.1|1382156-1382735 gi|974152716|gb|CP012012.1|1383373-1383952 gi|974149849|gb|CP012011.1|1429988-1430567 gi|961586173|gb|CP013621.1|1343756-1344335 gi|961572904|gb|CP013619.1|1312288-1312867 gi|961570270|gb|CP013616.1|1287104-1287683 gi|959165045|gb|CP009828.1|1291165-1291744 gi|941146344|gb|CP007676.1|1278294-1278873
ARG-ANNOT	Bla|TEM-124|AY327540|1-858|858|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-124:AY327540:1-858:858
CARD	Bla|TEM-124|AY327540|1-858|858|betalactams|Class_A_betalactamases|TEM	@phgb|AY327540|0-858|ARO:3000986|TEM-124 [Morganella morganii]
Lahey	Bla|TEM-124|AY327540|1-858|858|betalactams|Class_A_betalactamases|TEM	AAQ93491.1 AY327540.1:1-858
NCBI	Bla|TEM-124|AY327540|1-858|858|betalactams|Class_A_betalactamases|TEM	gi|37575116|gb|AY327540.1|1-858
Resfinder	Bla|TEM-124|AY327540|1-858|858|betalactams|Class_A_betalactamases|TEM	blaTEM-124_1_AY327540
ARG-ANNOT	Bla|OXY6-3|AJ871876|1-876|876|betalactams|Class_A_betalactamases|OXY	(Bla)OXY6-3:AJ871876:1-876:876
CARD	Bla|OXY6-3|AJ871876|1-876|876|betalactams|Class_A_betalactamases|OXY	@phgb|AJ871876|0-876|ARO:3002415|OXY-6-3 [Klebsiella oxytoca]
NCBI	Bla|OXY6-3|AJ871876|1-876|876|betalactams|Class_A_betalactamases|OXY	gi|60416718|emb|AJ871876.1|1-876
Resfinder	Bla|OXY6-3|AJ871876|1-876|876|betalactams|Class_A_betalactamases|OXY	blaOXY-6-3_3_AJ871876
NCBI	gi|160948434|emb|AM176547.2|betalactams|Class_A_betalactamases|SHV	gi|160948434|emb|AM176547.2|1-891
NCBI	Bla|SHV-5_2_AF462394|betalactams|Class_A_betalactamases|SHV	gi|18656791|gb|AF462394.1|1-861
Resfinder	Bla|SHV-5_2_AF462394|betalactams|Class_A_betalactamases|SHV	blaSHV-5_2_AF462394
CARD	1034|JQ364968.1|JQ364968|betalactams|Class_A_betalactamases|CARB	@phgb|JQ364968|3332-4229|ARO:3002252|CARB-14 [Acinetobacter baumannii]
Lahey	1034|JQ364968.1|JQ364968|betalactams|Class_A_betalactamases|CARB	AFI72872.1 JQ364968.1:3333-4229
NCBI	1034|JQ364968.1|JQ364968|betalactams|Class_A_betalactamases|CARB	gi|385721363|gb|JQ364968.1|3333-4229
ARG-ANNOT	Bla|SHV-59|AY790341|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-59:AY790341:1-861:861
CARD	Bla|SHV-59|AY790341|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY790341|0-861|ARO:3001114|SHV-59 [Klebsiella pneumoniae]
Lahey	Bla|SHV-59|AY790341|1-861|861|betalactams|Class_A_betalactamases|SHV	AAV66328.1 AY790341.1:1-861
NCBI	Bla|SHV-59|AY790341|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|55824372|gb|AY790341.1|1-861
Resfinder	Bla|SHV-59|AY790341|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-59_1_AY790341
NCBI	Sul|NC_002745.1123263|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|984671414|emb|LT009690.1|532298-533101 gi|974697948|dbj|AP017320.1|540410-541213 gi|927048389|gb|CP010890.1|493776-494579 gi|925190036|gb|CP012593.1|546908-547711 gi|803444476|gb|CP011147.1|537166-537969 gi|595636499|gb|CP007454.1|625737-624934 gi|312828563|emb|FR714927.1|510941-511744 gi|311222926|gb|CP001844.2|543018-543821 gi|262073980|gb|CP001781.1|506426-507229 gi|156720466|dbj|AP009324.1|571107-571910
CARD	Bla|EU477409.1|gene1|betalactams|Class_A_betalactamases|SHV	@phgb|EU477409|0-308|ARO:3001161|SHV-112 [Klebsiella pneumoniae]
NCBI	Bla|EU477409.1|gene1|betalactams|Class_A_betalactamases|SHV	gi|186970216|gb|EU477409.1|1-309
NCBI	gi|160948436|emb|AM176548.2|betalactams|Class_A_betalactamases|SHV	gi|160948436|emb|AM176548.2|1-874
ARG-ANNOT	Bla|CfiA1|AB087225|1-750|750|betalactams|Class_B_betalactamases|CFIA	(Bla)CfiA1:AB087225:1-750:750
NCBI	Bla|CfiA1|AB087225|1-750|750|betalactams|Class_B_betalactamases|CFIA	gi|22091055|dbj|AB087225.1|1-750
Resfinder	Bla|CfiA1|AB087225|1-750|750|betalactams|Class_B_betalactamases|CFIA	cfiA1_1_AB087225
ARG-ANNOT	gi|348019511|gb|JN638887.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-225:JN638887:1-822:822
CARD	gi|348019511|gb|JN638887.1|betalactams|Class_D_betalactamases|OXA	@phgb|JN638887|0-822|ARO:3001493|OXA-225 [Acinetobacter baumannii]
Lahey	gi|348019511|gb|JN638887.1|betalactams|Class_D_betalactamases|OXA	AEP43731.1 JN638887.1:1-822
NCBI	gi|348019511|gb|JN638887.1|betalactams|Class_D_betalactamases|OXA	gi|500829709|gb|JN968483.3|46228-47049 gi|348019511|gb|JN638887.1|1-822
Resfinder	gi|348019511|gb|JN638887.1|betalactams|Class_D_betalactamases|OXA	blaOXA-225_1_JN638887
CARD	gi|734704271|gb|KM588354.1|betalactams|Class_D_betalactamases|OXA	@phgb|KM588354|0-825|ARO:3003149|OXA-426 [Acinetobacter baumannii]
Lahey	gi|734704271|gb|KM588354.1|betalactams|Class_D_betalactamases|OXA	AJA32744.1 KM588354.1:1-825
NCBI	gi|734704271|gb|KM588354.1|betalactams|Class_D_betalactamases|OXA	gi|734704271|gb|KM588354.1|1-825
CARD	Flq|QnrB62_1_JX987101|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JX987101|0-681|ARO:3002775|QnrB62 [Citrobacter freundii]
NCBI	Flq|QnrB62_1_JX987101|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|961377543|gb|KT326691.1|8339-9019 gi|426263598|gb|JX987101.1|1-681
Resfinder	Flq|QnrB62_1_JX987101|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB62_1_JX987101
ARG-ANNOT	Bla|SHV-108|AM941849|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-108:AM941849:1-861:861
CARD	Bla|SHV-108|AM941849|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|HM751100|0-861|ARO:3001157|SHV-108 [Klebsiella pneumoniae]
Lahey	Bla|SHV-108|AM941849|1-861|861|betalactams|Class_A_betalactamases|SHV	CAP58292.1 AM922309.1:1-861
NCBI	Bla|SHV-108|AM941849|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|218091991|emb|AM922309.1|1-861
Resfinder	Bla|SHV-108|AM941849|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-108_1_AM922309
CARD	gi|694179375|gb|KM233165.1|betalactams|Class_A_betalactamases|SHV	@phgb|KM233165|0-861|ARO:3003153|SHV-186 [Klebsiella pneumoniae]
Lahey	gi|694179375|gb|KM233165.1|betalactams|Class_A_betalactamases|SHV	AIS67769.1 KM233165.1:1-861
NCBI	gi|694179375|gb|KM233165.1|betalactams|Class_A_betalactamases|SHV	gi|694179375|gb|KM233165.1|1-861
CARD	gi|693581978|dbj|LC004922.1|betalactams|Class_C_betalactamases|ACT	@phgb|LC004922|0-1146|ARO:3001855|ACT-35 [Enterobacter cloacae]
Lahey	gi|693581978|dbj|LC004922.1|betalactams|Class_C_betalactamases|ACT	BAP68758.1 LC004922.1:1-1146
NCBI	gi|693581978|dbj|LC004922.1|betalactams|Class_C_betalactamases|ACT	gi|693581978|dbj|LC004922.1|1-1146
NCBI	Bla|ROB-1_1_DQ840517|betalactams|Class_A_betalactamases|ROB	gi|300507134|gb|HM236408.1|2666-3583 gi|695214239|ref|NG_036782.1|2666-3583 gi|399920115|gb|JN202624.1|15522-15672 gi|399920115|gb|JN202624.1|1-101
Resfinder	Bla|ROB-1_1_DQ840517|betalactams|Class_A_betalactamases|ROB	blaROB-1_1_DQ840517
ARG-ANNOT	Bla|CMG|AY265892|1-1054|1054|putative|betalactams|Class_C_betalactamases|ACT	(Bla)CMG:AY265892:1-1054:1054
NCBI	Bla|CMG|AY265892|1-1054|1054|putative|betalactams|Class_C_betalactamases|ACT	gi|33089939|gb|AY265892.1|1-1054
Resfinder	Bla|CMG|AY265892|1-1054|1054|putative|betalactams|Class_C_betalactamases|ACT	blaCMG_1_AY265892
CARD	CARD|pvgb|AL513383|179218-179845|ARO:3003479|tetR|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	@pvgb|AL513383|179218-179845|ARO:3003479|tetR [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
NCBI	CARD|pvgb|AL513383|179218-179845|ARO:3003479|tetR|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|984686374|gb|HQ700358.2|15375-16002 gi|981191958|emb|LN999997.1|2497306-2496679 gi|971520763|gb|CP008715.1|91959-91332 gi|949881887|gb|CP012931.1|24951-24324 gi|944397758|gb|CP013027.1|131722-132349 gi|917657445|gb|KR827684.1|38531-39158 gi|909636483|emb|LN850163.1|118410-119037 gi|909010439|gb|JN247441.4|40845-41472 gi|884906146|gb|CP012007.1|122512-121885 gi|857118485|gb|CP011223.1|1682959-1682332
CARD	CARD|phgb|NC_002695|1737553-1737967|ARO:3000676|H-NS|Multi-drug_resistance|MDR_regulator|HNS	@phgb|NC_002695|1737553-1737967|ARO:3000676|H-NS [Escherichia coli O157:H7 str. Sakai]
NCBI	CARD|phgb|NC_002695|1737553-1737967|ARO:3000676|H-NS|Multi-drug_resistance|MDR_regulator|HNS	gi|937297913|gb|CP012802.1|2088998-2088584 gi|749204400|gb|CP007592.1|1659741-1660155 gi|734586714|gb|CP010304.1|1658031-1658445 gi|675820611|emb|LM997173.1|513161-513575 gi|675819660|emb|LM996223.1|46536-46950 gi|667689599|gb|CP008957.1|1822740-1823154 gi|666001753|gb|CP008805.1|1657239-1657653 gi|386794017|gb|CP001925.1|1739493-1739907 gi|254590536|gb|CP001368.1|1658024-1658438 gi|209157093|gb|CP001164.1|1659050-1659464
CARD	415|AF367983.2|AF367983|betalactams|Class_A_betalactamases|BLA1	@phgb|AY453161|500-1430|ARO:3000090|BLA1 [Bacillus anthracis]
NCBI	415|AF367983.2|AF367983|betalactams|Class_A_betalactamases|BLA1	gi|984728683|gb|CP014179.1|2328598-2329527 gi|924547193|gb|CP012519.1|2328116-2329045 gi|821571517|dbj|AP014833.1|3141261-3140332 gi|756780057|gb|CP010852.1|2582936-2583865 gi|753757473|gb|CP010322.1|45192-46121 gi|753736311|gb|CP009981.1|2162971-2162042 gi|753718837|gb|CP009902.1|4764228-4763299 gi|753541995|gb|CP009598.1|2535686-2534757 gi|753490707|gb|CP009700.1|48587-47658 gi|753470659|gb|CP009544.1|2546525-2545596
ARG-ANNOT	Bla|OXA-55|AY343493|77-946|870|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-55:AY343493:77-946:870
CARD	Bla|OXA-55|AY343493|77-946|870|betalactams|Class_D_betalactamases|OXA	@phgb|AY343493|76-946|ARO:3001813|OXA-55 [Shewanella algae]
Lahey	Bla|OXA-55|AY343493|77-946|870|betalactams|Class_D_betalactamases|OXA	AAR03105.1 AY343493.1:77-946
NCBI	Bla|OXA-55|AY343493|77-946|870|betalactams|Class_D_betalactamases|OXA	gi|37789888|gb|AY343493.1|77-946
Resfinder	Bla|OXA-55|AY343493|77-946|870|betalactams|Class_D_betalactamases|OXA	blaOXA-55_1_AY343493
CARD	MLS|msrC_2_AF313494|MLS|Macrolide_resistance_efflux_pumps|MSRC	@phgb|AF313494|0-1479|ARO:3002819|msrC [Enterococcus faecium]
NCBI	MLS|msrC_2_AF313494|MLS|Macrolide_resistance_efflux_pumps|MSRC	gi|12659043|gb|AF313494.1|AF313494|1-1479
Resfinder	MLS|msrC_2_AF313494|MLS|Macrolide_resistance_efflux_pumps|MSRC	msr(C)_2_AF313494
NCBI	gi|94960152|gb|DQ519089.1|betalactams|Class_D_betalactamases|OXA	gi|94960152|gb|DQ519089.1|1-865
CARD	gi|558607389|gb|KF513177.1|betalactams|Class_A_betalactamases|SHV	@phgb|KF513177|0-861|ARO:3001356|SHV-172 [Klebsiella pneumoniae]
Lahey	gi|558607389|gb|KF513177.1|betalactams|Class_A_betalactamases|SHV	AHA80958.1 KF513177.1:1-861
NCBI	gi|558607389|gb|KF513177.1|betalactams|Class_A_betalactamases|SHV	gi|558607389|gb|KF513177.1|1-861
Resfinder	gi|558607389|gb|KF513177.1|betalactams|Class_A_betalactamases|SHV	blaSHV-172_1_KF513177
ARG-ANNOT	Gly|VanH|DQ246438|124-1179|1056|Glycopeptides|VanA-type_resistance_protein|VANHA	(Gly)VanH:DQ246438:124-1179:1056;(Gly)VanH-Ac1:DQ246438:124-1179:1056
NCBI	Gly|VanH|DQ246438|124-1179|1056|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|82658572|gb|DQ246438.1|124-1179
Resfinder	Gly|VanH|DQ246438|124-1179|1056|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-Ac1_6_DQ246438
CARD	CARD|phgb|AY590119|0-735|ARO:3003557|SFB-1|betalactams|Class_B_betalactamases|SFB	@phgb|AY590119|0-735|ARO:3003557|SFB-1 [Shewanella frigidimarina]
NCBI	CARD|phgb|AY590119|0-735|ARO:3003557|SFB-1|betalactams|Class_B_betalactamases|SFB	gi|50956655|gb|AY590119.1|1-735
ARG-ANNOT	Bla|OXA-66|EF051061|485-1309|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-66:EF051061:485-1309:825
Lahey	Bla|OXA-66|EF051061|485-1309|825|betalactams|Class_D_betalactamases|OXA	AAW81338.1 AY750909.1:1-825
NCBI	Bla|OXA-66|EF051061|485-1309|825|betalactams|Class_D_betalactamases|OXA	gi|984881271|gb|CP014215.1|1411243-1410419 gi|974022331|gb|CP013924.1|2342017-2342841 gi|827403829|gb|CP010779.1|2268563-2269387 gi|803657307|gb|CP007535.2|3678718-3679542 gi|615556143|gb|CP007577.1|3207503-3208327 gi|586958174|gb|CP006963.1|1761988-1761164 gi|546200742|dbj|AP013357.1|2325341-2326165 gi|522344435|gb|CP003849.1|1767645-1766821 gi|522324570|gb|CP003846.1|2268795-2269619 gi|407899266|gb|CP003856.1|2028601-2027777
Resfinder	Bla|OXA-66|EF051061|485-1309|825|betalactams|Class_D_betalactamases|OXA	blaOXA-66_4_FJ360530
CARD	CARD|phgb|FJ196385|8531-9323|ARO:3000413|sul3|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULIII	@phgb|FJ196385|8531-9323|ARO:3000413|sul3 [Escherichia coli]
NCBI	CARD|phgb|FJ196385|8531-9323|ARO:3000413|sul3|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULIII	gi|937637492|gb|KT334335.1|91885-91093 gi|928083869|gb|CP012682.1|71196-70404 gi|917657445|gb|KR827684.1|47826-48618 gi|909636816|emb|LN850165.1|101747-102539 gi|909636430|emb|LN850162.1|6434-7226 gi|820773184|gb|KM877269.1|91895-91103 gi|828971497|gb|CP011644.1|31552-32344 gi|754341646|gb|CP010575.1|15845-16637 gi|665822573|gb|KJ484634.1|7591-8383 gi|660582175|gb|CP008798.1|16469-17261
NCBI	MLS|lnuF_2_DQ836009|MLS|Lincosamide_nucleotidyltransferases|LNUF	gi|112950028|gb|DQ836009.1|1310-2131
Resfinder	MLS|lnuF_2_DQ836009|MLS|Lincosamide_nucleotidyltransferases|LNUF	lnu(F)_2_DQ836009
NCBI	Sul|sul1_24_EU117158|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|270267857|gb|GU187357.1|6-845 gi|157139467|gb|EU117158.1|2360-3199 gi|118511772|emb|AJ311891.3|4927-5766 gi|71273546|emb|AM040709.1|2463-3302
Resfinder	Sul|sul1_24_EU117158|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_24_EU117158
ARG-ANNOT	Bla|TEM-54|AF104442|194-1054|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-54:AF104442:194-1054:861
CARD	Bla|TEM-54|AF104442|194-1054|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF104442|193-1054|ARO:3000923|TEM-54 [Escherichia coli]
Lahey	Bla|TEM-54|AF104442|194-1054|861|betalactams|Class_A_betalactamases|TEM	AAD22539.1 AF104442.1:194-1054
NCBI	Bla|TEM-54|AF104442|194-1054|861|betalactams|Class_A_betalactamases|TEM	gi|4557167|gb|AF104442.1|194-1054
Resfinder	Bla|TEM-54|AF104442|194-1054|861|betalactams|Class_A_betalactamases|TEM	blaTEM-54_1_AF104442
NCBI	Bla|LEN-3_1_AY130286|betalactams|Class_A_betalactamases|LEN	gi|28192517|gb|AY130286.1|2-823
Resfinder	Bla|LEN-3_1_AY130286|betalactams|Class_A_betalactamases|LEN	blaLEN3_1_AY130286
ARG-ANNOT	Bla|cphA5|AY227051|1-765|765|betalactams|Class_B_betalactamases|CPHA	(Bla)cphA5:AY227051:1-765:765
CARD	Bla|cphA5|AY227051|1-765|765|betalactams|Class_B_betalactamases|CPHA	@phgb|AY227051|0-765|ARO:3003101|cphA5 [Aeromonas salmonicida]
NCBI	Bla|cphA5|AY227051|1-765|765|betalactams|Class_B_betalactamases|CPHA	gi|37359433|gb|AY227051.1|1-765
Resfinder	Bla|cphA5|AY227051|1-765|765|betalactams|Class_B_betalactamases|CPHA	cphA5_1_AY227051
ARG-ANNOT	Bla|SHV-94|EF373970|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-94:EF373970:1-861:861
CARD	Bla|SHV-94|EF373970|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|EF373970|0-861|ARO:3001146|SHV-94 [Klebsiella pneumoniae]
Lahey	Bla|SHV-94|EF373970|1-861|861|betalactams|Class_A_betalactamases|SHV	ABN49111.1 EF373970.1:1-861
NCBI	Bla|SHV-94|EF373970|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|125658583|gb|EF373970.1|1-861
Resfinder	Bla|SHV-94|EF373970|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-94_1_EF373970
ARG-ANNOT	Bla|CMY-30|EF685372|1-1143|1143|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-30:EF685372:1-1143:1143
CARD	Bla|CMY-30|EF685372|1-1143|1143|betalactams|Class_C_betalactamases|CMY	@phgb|EF685372|0-1143|ARO:3002041|CMY-30 [Escherichia coli]
Lahey	Bla|CMY-30|EF685372|1-1143|1143|betalactams|Class_C_betalactamases|CMY	ABS12249.1 EF685372.2:1-1143
NCBI	Bla|CMY-30|EF685372|1-1143|1143|betalactams|Class_C_betalactamases|CMY	gi|332867558|gb|EF685372.2|1-1143
Resfinder	Bla|CMY-30|EF685372|1-1143|1143|betalactams|Class_C_betalactamases|CMY	blaCMY-30_1_EF685372
Lahey	Bla|OCA-114_4_HM104633|betalactams|Class_D_betalactamases|OXA	ADI25068.1 HM104633.1:1-828
NCBI	Bla|OCA-114_4_HM104633|betalactams|Class_D_betalactamases|OXA	gi|297251582|gb|HM104633.1|1-828
Resfinder	Bla|OCA-114_4_HM104633|betalactams|Class_D_betalactamases|OXA	blaOXA-114_4_HM104633
ARG-ANNOT	Bla|SHV-48|AY263404|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-48:AY263404:1-861:861
CARD	Bla|SHV-48|AY263404|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AY263404|0-861|ARO:3001105|SHV-48 [Klebsiella pneumoniae]
Lahey	Bla|SHV-48|AY263404|1-861|861|betalactams|Class_A_betalactamases|SHV	AAP03063.1 AY263404.1:1-861
NCBI	Bla|SHV-48|AY263404|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|29893407|gb|AY263404.1|1-861
Resfinder	Bla|SHV-48|AY263404|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-48_1_AY263404
CARD	gi|698174203|gb|KM087856.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087856|0-1140|ARO:3002153|DHA-22 [Escherichia coli]
Lahey	gi|698174203|gb|KM087856.1|betalactams|Class_C_betalactamases|DHA	AIT76109.1 KM087856.1:1-1140
NCBI	gi|698174203|gb|KM087856.1|betalactams|Class_C_betalactamases|DHA	gi|698174203|gb|KM087856.1|1-1140
ARG-ANNOT	1718|JN205800.1|JN205800|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-181:HM992946:1-798:798
CARD	1718|JN205800.1|JN205800|betalactams|Class_D_betalactamases|OXA	@phgb|JN205800|4140-4938|ARO:3001784|OXA-181 [Klebsiella pneumoniae]
Lahey	1718|JN205800.1|JN205800|betalactams|Class_D_betalactamases|OXA	AEP16366.1 JN205800.1:4141-4938
NCBI	1718|JN205800.1|JN205800|betalactams|Class_D_betalactamases|OXA	gi|971497878|gb|CP012904.1|8475-9272 gi|958102843|emb|LN824133.1|127892-128689 gi|958102843|emb|LN824133.1|1154212-1155009 gi|958102843|emb|LN824133.1|3346911-3346114 gi|908778063|gb|KT005457.1|34556-33759 gi|820773739|gb|KP400525.1|40939-41736 gi|762041406|gb|KM660724.1|31113-30316 gi|731174251|dbj|AB972272.1|4788-5585 gi|440685600|gb|JQ996150.1|14587-15384 gi|347602110|gb|JN205800.1|4141-4938 gi|304368222|gb|HM992946.1|1-798
Resfinder	1718|JN205800.1|JN205800|betalactams|Class_D_betalactamases|OXA	blaOXA-181_1_HM992946
CARD	CARD|phgb|GU060319|624-861|ARO:3003023|dfrB6|Trimethoprim|Dihydrofolate_reductase|DFRB	@phgb|GU060319|624-861|ARO:3003023|dfrB6 [uncultured bacterium]
NCBI	CARD|phgb|GU060319|624-861|ARO:3003023|dfrB6|Trimethoprim|Dihydrofolate_reductase|DFRB	gi|308052966|gb|GU060319.1|625-862 gi|88604773|gb|DQ274503.1|394-631
CARD	Bla|OXA-351_1_JF297580|betalactams|Class_D_betalactamases|OXA	@phgb|KF297580|0-822|ARO:3001538|OXA-351 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-351_1_JF297580|betalactams|Class_D_betalactamases|OXA	AGW83449.1 KF297580.1:1-822
NCBI	Bla|OXA-351_1_JF297580|betalactams|Class_D_betalactamases|OXA	gi|546237213|gb|KF297580.1|1-822
Resfinder	Bla|OXA-351_1_JF297580|betalactams|Class_D_betalactamases|OXA	blaOXA-351_1_KF297580
NCBI	gi|62736339|gb|AY553332.1|betalactams|Class_B_betalactamases|IMP	gi|62736339|gb|AY553332.1|1-1505 gi|226426103|gb|EU855788.1|275470-275370 gi|226426103|gb|EU855788.1|139851-139925 gi|226426103|gb|EU855788.1|269337-269280 gi|226426103|gb|EU855788.1|139920-139967 gi|226425792|gb|EU855787.1|253232-253332 gi|226425792|gb|EU855787.1|139851-139925 gi|226425792|gb|EU855787.1|259365-259422 gi|226425792|gb|EU855787.1|139920-139967 gi|365269063|gb|JN624388.2|3938-3995 gi|239702135|emb|FN397627.1|1662-1718
CARD	gi|10443723|gb|AF226622.1|betalactams|Class_A_betalactamases|SHV	@phgb|AF226622|54-915|ARO:3001073|SHV-14 [Klebsiella pneumoniae]
NCBI	gi|10443723|gb|AF226622.1|betalactams|Class_A_betalactamases|SHV	gi|10443723|gb|AF226622.1|AF226622|55-916 gi|14532426|gb|AY036620.1|53-88
ARG-ANNOT	1019|JQ343850.1|JQ343850|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	(Fcyn)FosA:JQ343850:4619-5035:417
CARD	1019|JQ343850.1|JQ343850|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	@phgb|JF411006|951-1368|ARO:3002872|FosA3 [Escherichia coli]
NCBI	1019|JQ343850.1|JQ343850|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|974145082|gb|KT734860.1|725-1141 gi|961666360|gb|KT185451.1|20502-20918 gi|961494526|gb|KT282968.1|39996-40412 gi|954665559|gb|KT879914.1|8222-7806 gi|922846457|gb|KT199757.1|2204-2620 gi|918462945|gb|KP987215.1|26528-26944 gi|817046807|gb|KP893385.1|79961-79545 gi|846280687|gb|KR091911.1|182019-181603 gi|831358676|emb|LN864416.1|5072-4656 gi|831358012|emb|LN735561.1|21969-21553
Resfinder	1019|JQ343850.1|JQ343850|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_14_AB522970
NCBI	MLS|ermA_2_AF002716|MLS|23S_rRNA_methyltransferases|ERMA	gi|955670971|gb|CP013202.1|604327-605058 gi|917641723|gb|CP010449.1|1136723-1135992 gi|338795737|emb|FR691054.1|34898-35629 gi|326650014|gb|CP002512.1|171645-172376 gi|306408173|gb|CP002121.1|856174-856905 gi|215263197|emb|FM162351.1|5220-5951 gi|94546904|gb|CP000262.1|1652896-1653627 gi|2190969|gb|AF002716.1|AF002716|211-942 gi|674653132|gb|KM194593.1|1-677 gi|67974730|gb|DQ082900.1|1-530
Resfinder	MLS|ermA_2_AF002716|MLS|23S_rRNA_methyltransferases|ERMA	erm(A)_2_AF002716
ARG-ANNOT	Bla|IMP-33|JN848782|1-741|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-33:JN848782:1-741:741
CARD	Bla|IMP-33|JN848782|1-741|741|betalactams|Class_B_betalactamases|IMP	@phgb|JN848782|0-741|ARO:3002224|IMP-33 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-33|JN848782|1-741|741|betalactams|Class_B_betalactamases|IMP	AEU17778.1 JN848782.2:1828-2568
NCBI	Bla|IMP-33|JN848782|1-741|741|betalactams|Class_B_betalactamases|IMP	gi|536749749|gb|JN848782.2|1828-2568
Resfinder	Bla|IMP-33|JN848782|1-741|741|betalactams|Class_B_betalactamases|IMP	blaIMP-33_1_JN848782
CARD	CARD|phgb|AY956335|38-899|ARO:3001004|TEM-141|betalactams|Class_A_betalactamases|TEM	@phgb|AY956335|38-899|ARO:3001004|TEM-141 [Enterobacter cloacae]
NCBI	CARD|phgb|AY956335|38-899|ARO:3001004|TEM-141|betalactams|Class_A_betalactamases|TEM	gi|695211426|ref|NG_036075.1|39-900
ARG-ANNOT	AGly|AphA6|JF949760|695-1474|771|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)AphA6:JF949760:695-1474:771
NCBI	AGly|AphA6|JF949760|695-1474|771|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|787862679|gb|CP008707.1|53507-54286 gi|553308086|gb|KF669606.1|39997-40776 gi|339960689|gb|JF949760.1|695-1474
ARG-ANNOT	gi|327397924|gb|HQ342889.1|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-12:HQ342889:1-882:882
CARD	gi|327397924|gb|HQ342889.1|betalactams|Class_A_betalactamases|KPC	@phgb|HQ342889|0-882|ARO:3002323|KPC-13 [Enterobacter cloacae]
Lahey	gi|327397924|gb|HQ342889.1|betalactams|Class_A_betalactamases|KPC	AEA73284.1 HQ342889.1:1-882
NCBI	gi|327397924|gb|HQ342889.1|betalactams|Class_A_betalactamases|KPC	gi|327397924|gb|HQ342889.1|1-882
Resfinder	gi|327397924|gb|HQ342889.1|betalactams|Class_A_betalactamases|KPC	blaKPC-12_1_HQ342889
ARG-ANNOT	100|FR772051.1|FR772051|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)Spc:X02588:331-1113:783
NCBI	100|FR772051.1|FR772051|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|985566378|dbj|LC068959.1|36366-35584 gi|985563902|dbj|AB721404.1|49542-48760 gi|974697948|dbj|AP017320.1|56641-55859 gi|974697948|dbj|AP017320.1|1765077-1764295 gi|961586173|gb|CP013621.1|1797036-1796254 gi|803444476|gb|CP011147.1|51083-50301 gi|803444476|gb|CP011147.1|1669144-1668362 gi|703576232|gb|CP009554.1|862656-861874 gi|703576232|gb|CP009554.1|1770233-1769451 gi|657154530|gb|CP007447.1|1749261-1748479 gi|632122717|gb|KF245454.1|2859-2077 gi|574959948|gb|KF933412.1|4797-5579 gi|574959940|gb|KF933411.1|4720-5502
Resfinder	100|FR772051.1|FR772051|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	spc_1_X02588
NCBI	gi|442540410|gb|JX514369.1|betalactams|Class_C_betalactamases|CMY	gi|442540410|gb|JX514369.1|297-1483
ARG-ANNOT	604|AJ400619.1|AJ400619|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-29:AJ400619:34-834:801
CARD	604|AJ400619.1|AJ400619|betalactams|Class_D_betalactamases|OXA	@phgb|AJ400619|33-834|ARO:3001424|OXA-29 [Fluoribacter gormanii]
Lahey	604|AJ400619.1|AJ400619|betalactams|Class_D_betalactamases|OXA	CAC35728.1 AJ400619.1:34-834
NCBI	604|AJ400619.1|AJ400619|betalactams|Class_D_betalactamases|OXA	gi|395132097|emb|FQ958212.1|50858-50058 gi|13539600|emb|AJ400619.1|34-834
Resfinder	604|AJ400619.1|AJ400619|betalactams|Class_D_betalactamases|OXA	blaOXA-29_1_AJ400619
ARG-ANNOT	gi|401713038|gb|JX258134.1|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-33:JX258134:1-801:801
CARD	gi|401713038|gb|JX258134.1|betalactams|Class_B_betalactamases|VIM	@phgb|JX258134|0-801|ARO:3002303|VIM-33 [Klebsiella pneumoniae]
Lahey	gi|401713038|gb|JX258134.1|betalactams|Class_B_betalactamases|VIM	AFP99175.1 JX258134.1:1-801
NCBI	gi|401713038|gb|JX258134.1|betalactams|Class_B_betalactamases|VIM	gi|468397575|gb|KC597709.1|74-874 gi|404312149|dbj|AB703468.1|111-911 gi|401713038|gb|JX258134.1|1-801
Resfinder	gi|401713038|gb|JX258134.1|betalactams|Class_B_betalactamases|VIM	blaVIM-33_1_JX258134
NCBI	672|AF181950.1|AF181950|betalactams|Penicillin_binding_protein|MECA	gi|695199814|ref|NG_035309.1|1-729 gi|938149449|gb|KR936061.1|2008-2267
ARG-ANNOT	Rif|Arr6|JF922883|1-453|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	(Rif)Arr6:JF922883:1-453:453
NCBI	Rif|Arr6|JF922883|1-453|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	gi|695225782|ref|NG_041409.1|1-453
Resfinder	Rif|Arr6|JF922883|1-453|453|Rifampin|Rifampin_ADP-ribosyltransferase_Arr|ARR	ARR-6_3_JF922883
NCBI	1493|AY339625.2|AY339625|betalactams|Class_C_betalactamases|CMY	gi|695210321|ref|NG_035929.1|4918-5793
NCBI	gi|48734423|gb|AY628176.1|betalactams|Class_A_betalactamases|TEM	gi|48734423|gb|AY628176.1|1-936
CARD	CARD|pvgb|AE009949|878481-879282|ARO:3003387|Streptococcus|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	@pvgb|AE009949|878481-879282|ARO:3003387|Streptococcus pyogenes sulfonamide resistant folP mutants [Streptococcus pyogenes MGAS8232]
NCBI	CARD|pvgb|AE009949|878481-879282|ARO:3003387|Streptococcus|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|19913450|gb|AE009949.1|878482-879283
NCBI	gi|591542958|gb|KJ207209.1|betalactams|Class_C_betalactamases|ACT	gi|591542958|gb|KJ207209.1|353-1599
CARD	CARD|phgb|FJ196385|11083-12313|ARO:3003107|mefB|MLS|Macrolide_resistance_efflux_pumps|MEFB	@phgb|FJ196385|11083-12313|ARO:3003107|mefB [Escherichia coli]
NCBI	CARD|phgb|FJ196385|11083-12313|ARO:3003107|mefB|MLS|Macrolide_resistance_efflux_pumps|MEFB	gi|695225407|ref|NG_041272.1|9948-11178 gi|695213813|ref|NG_036690.1|11084-12314 gi|917657445|gb|KR827684.1|50378-51267 gi|214027202|gb|FJ196387.1|5027-5790 gi|695213807|ref|NG_036689.1|4518-5281 gi|928083869|gb|CP012682.1|68645-68386 gi|828971497|gb|CP011644.1|34104-34363 gi|754341646|gb|CP010575.1|18397-18656 gi|743008998|gb|CP010362.1|57633-57374 gi|665822573|gb|KJ484634.1|10143-10402
NCBI	gi|347364914|gb|HM046998.2|betalactams|Class_C_betalactamases|CMY	gi|347364914|gb|HM046998.2|1040-2267
ARG-ANNOT	Bla|OXA-194|HQ425492|1-822|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-194:HQ425492:1-822:822
CARD	Bla|OXA-194|HQ425492|1-822|822|betalactams|Class_D_betalactamases|OXA	@phgb|HQ425492|0-822|ARO:3001479|OXA-194 [Acinetobacter nosocomialis]
Lahey	Bla|OXA-194|HQ425492|1-822|822|betalactams|Class_D_betalactamases|OXA	AEB98920.1 HQ425492.1:1-822
NCBI	Bla|OXA-194|HQ425492|1-822|822|betalactams|Class_D_betalactamases|OXA	gi|329745036|gb|HQ425492.1|1-822
Resfinder	Bla|OXA-194|HQ425492|1-822|822|betalactams|Class_D_betalactamases|OXA	blaOXA-194_1_HQ425492
NCBI	1888|AF322577.2|AF322577|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|974751547|gb|KU130294.1|207273-206641 gi|953007081|gb|CP013119.1|4210038-4209406 gi|937637492|gb|KT334335.1|116698-117330 gi|930425904|gb|KR067584.1|516-1148 gi|930425900|gb|KR067583.1|2087-2719 gi|930425896|gb|KR067582.1|516-1148 gi|929916870|gb|KR822247.1|12225-12857 gi|923091306|gb|KP942844.1|144-776 gi|923091301|gb|KP942842.1|150-782 gi|921325527|dbj|LC075717.1|5239-5871
CARD	CARD|phgb|KT283240.1|0-627|ARO:3002370|VEB-1|betalactams|Class_A_betalactamases|VEB	@phgb|KT283240.1|0-627|ARO:3002370|VEB-1 [Pseudomonas aeruginosa]
NCBI	CARD|phgb|KT283240.1|0-627|ARO:3002370|VEB-1|betalactams|Class_A_betalactamases|VEB	gi|924899571|gb|KT283240.1|1-627
ARG-ANNOT	Bla|CMY-19|AB194410|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-19:AB194410:1-1146:1146
CARD	Bla|CMY-19|AB194410|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AB194410|0-1149|ARO:3002030|CMY-19 [Klebsiella pneumoniae]
Lahey	Bla|CMY-19|AB194410|1-1146|1146|betalactams|Class_C_betalactamases|CMY	BAE48233.1 AB194410.1:1-1149
NCBI	Bla|CMY-19|AB194410|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|81157965|dbj|AB194410.1|1-1149
Resfinder	Bla|CMY-19|AB194410|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-19_1_AB194410
ARG-ANNOT	gi|56541833|emb|AJ309734.2|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-51:DQ385606:669-1493:825
CARD	gi|56541833|emb|AJ309734.2|betalactams|Class_D_betalactamases|OXA	@phgb|AJ309734|0-825|ARO:3001612|OXA-51 [Acinetobacter baumannii]
Lahey	gi|56541833|emb|AJ309734.2|betalactams|Class_D_betalactamases|OXA	CAC83905.2 AJ309734.2:1-825
NCBI	gi|56541833|emb|AJ309734.2|betalactams|Class_D_betalactamases|OXA	gi|88659519|gb|DQ385606.1|669-1493 gi|56541833|emb|AJ309734.2|1-825 gi|944549895|gb|KR922889.1|1-823 gi|944549897|gb|KR922890.1|1-822
Resfinder	gi|56541833|emb|AJ309734.2|betalactams|Class_D_betalactamases|OXA	blaOXA-51_1_AJ309734
ARG-ANNOT	671|AY587956.1|AY587956|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-61:AY587956:123-896:774
CARD	671|AY587956.1|AY587956|betalactams|Class_D_betalactamases|OXA	@phgb|AY587956|0-774|ARO:3001773|OXA-61 [Campylobacter jejuni]
Lahey	671|AY587956.1|AY587956|betalactams|Class_D_betalactamases|OXA	AAT01092.1 AY587956.1:123-896
NCBI	671|AY587956.1|AY587956|betalactams|Class_D_betalactamases|OXA	gi|823267688|gb|KR061506.1|1-774 gi|46561719|gb|AY587956.1|123-896
Resfinder	671|AY587956.1|AY587956|betalactams|Class_D_betalactamases|OXA	blaOXA-61_1_AY587956
CARD	Phe|U75299|gene|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|U75299|0-717|ARO:3002671|cat-TC [Lactobacillus reuteri]
NCBI	Phe|U75299|gene|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|695197731|ref|NG_034792.1|657-1373
CARD	CARD|pvgb|CP004022|3579497-3580682|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP004022|3579497-3580682|ARO:3001312|elfamycin resistant EF-Tu [Proteus mirabilis BB2000]
NCBI	CARD|pvgb|CP004022|3579497-3580682|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|529186758|gb|CP004022.1|3579498-3580683
NCBI	gi|397174612|dbj|AB737978.1|betalactams|Class_C_betalactamases|ACT	gi|397174612|dbj|AB737978.1|1-1142
ARG-ANNOT	Bla|JN714480|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-68:JN714480:1040-2185:1146
CARD	Bla|JN714480|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JN714480|1039-2185|ARO:3002081|CMY-68 [Citrobacter freundii]
Lahey	Bla|JN714480|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	AEZ49855.1 JN714480.1:1040-2185
NCBI	Bla|JN714480|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	gi|374414421|gb|JN714480.1|1040-2185
Resfinder	Bla|JN714480|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-68_1_JN714480
ARG-ANNOT	Bla|SHV-102|EU024485|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-102:EU024485:1-861:861
CARD	Bla|SHV-102|EU024485|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|EU024485|0-861|ARO:3001151|SHV-102 [Escherichia coli]
Lahey	Bla|SHV-102|EU024485|1-861|861|betalactams|Class_A_betalactamases|SHV	ABS72342.1 EU024485.1:1-861
NCBI	Bla|SHV-102|EU024485|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|154269429|gb|EU024485.1|1-861
Resfinder	Bla|SHV-102|EU024485|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-102_2_EU024485
Lahey	Bla|OXA-50_3_AY306132|betalactams|Class_D_betalactamases|OXA	AAQ76279.1 AY306132.1:1-789
NCBI	Bla|OXA-50_3_AY306132|betalactams|Class_D_betalactamases|OXA	gi|974311447|gb|CP008863.1|3494781-3495569 gi|974290783|gb|CP008862.1|4456108-4455320 gi|961421427|gb|CP013144.1|3781977-3782765 gi|957647579|dbj|AP017302.1|6817510-6818298 gi|674252391|gb|CP008739.2|6754624-6755412 gi|563408818|gb|CP006853.1|6522877-6523665 gi|115583796|gb|CP000438.1|6480480-6481268 gi|34591713|gb|AY306131.1|1-789
Resfinder	Bla|OXA-50_3_AY306132|betalactams|Class_D_betalactamases|OXA	blaOXA-50_3_AY306132
ARG-ANNOT	424|D85892.1|D85892|MLS|Macrolide_phosphotransferases|MPHB	(MLS)MphB:D85892:1159-2067:909
CARD	424|D85892.1|D85892|MLS|Macrolide_phosphotransferases|MPHB	@phgb|D85892|1158-2067|ARO:3000318|mphB [Escherichia coli]
NCBI	424|D85892.1|D85892|MLS|Macrolide_phosphotransferases|MPHB	gi|665821556|gb|KJ484626.1|150538-149630 gi|312949035|gb|CP001856.1|64407-65315 gi|215252832|gb|CP001232.1|93165-94073 gi|190411126|gb|EU727204.1|1751-2659 gi|9909131|dbj|AB038654.1|3971-4879 gi|4218049|dbj|AB020531.1|4167-5075 gi|1864008|dbj|D85892.1|1159-2067 gi|514442112|gb|KC669391.1|1-869
Resfinder	424|D85892.1|D85892|MLS|Macrolide_phosphotransferases|MPHB	mph(B)_1_D85892
ARG-ANNOT	gi|452084994|emb|HE614014.2|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-258:HE614014:1-825:825
CARD	gi|452084994|emb|HE614014.2|betalactams|Class_D_betalactamases|OXA	@phgb|HE614014|0-825|ARO:3001503|OXA-258 [Achromobacter ruhlandii]
Lahey	gi|452084994|emb|HE614014.2|betalactams|Class_D_betalactamases|OXA	CCE73593.2 HE614014.2:1-825
NCBI	gi|452084994|emb|HE614014.2|betalactams|Class_D_betalactamases|OXA	gi|452084994|emb|HE614014.2|1-825 gi|452085007|emb|HF562853.2|1-823
Resfinder	gi|452084994|emb|HE614014.2|betalactams|Class_D_betalactamases|OXA	blaOXA-258_1_HE614014
ARG-ANNOT	Flq|Qnr-A1|AY070235|303-959|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	(Flq)Qnr-A1:AY070235:303-959:657
CARD	Flq|Qnr-A1|AY070235|303-959|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	@phgb|DQ831141|8921-9578|ARO:3002707|QnrA1 [Klebsiella pneumoniae]
NCBI	Flq|Qnr-A1|AY070235|303-959|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	gi|959190351|gb|CP013324.1|122462-121806 gi|926460200|gb|KR780673.1|13216-13872 gi|828952302|gb|CP011622.1|102439-103095 gi|723258375|gb|CP009883.1|252963-252307 gi|723243622|gb|CP009869.1|141853-142509 gi|662716651|gb|CP008824.1|274425-275081 gi|660573358|gb|CP008790.1|148792-149448 gi|619739382|gb|CP007558.1|226746-227402 gi|549442275|gb|KF501390.1|12926-13582 gi|371721881|gb|JN566044.1|9931-10587 gi|371721881|gb|JN566044.1|16245-16901
Resfinder	Flq|Qnr-A1|AY070235|303-959|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	QnrA1_1_AY070235
CARD	MLS|ermC_3_M17990|MLS|23S_rRNA_methyltransferases|ERMC	@phgb|M17990|1679-2414|ARO:3000250|ErmC [Plasmid pE5]
NCBI	MLS|ermC_3_M17990|MLS|23S_rRNA_methyltransferases|ERMC	gi|8927566|gb|AF276982.1|AF276982|1605-2339 gi|153063|gb|M17990.1|PE5PE5A|1680-2414 gi|353127779|gb|JF968533.1|150-197
Resfinder	MLS|ermC_3_M17990|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_3_M17990
ARG-ANNOT	gi|117570984|emb|AJ854182.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-74:AJ854182:1-801:801
CARD	gi|117570984|emb|AJ854182.1|betalactams|Class_D_betalactamases|OXA	@phgb|AJ854182|0-801|ARO:3001798|OXA-74 [Pseudomonas aeruginosa]
Lahey	gi|117570984|emb|AJ854182.1|betalactams|Class_D_betalactamases|OXA	CAH69530.1 AJ854182.1:1-801
NCBI	gi|117570984|emb|AJ854182.1|betalactams|Class_D_betalactamases|OXA	gi|160334144|gb|EU161636.1|190-990 gi|117570984|emb|AJ854182.1|1-801
Resfinder	gi|117570984|emb|AJ854182.1|betalactams|Class_D_betalactamases|OXA	blaOXA-74_1_EU161636
NCBI	Fos|FN543093.2|gene2318|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|323575285|emb|FN543093.2|2366056-2365649
NCBI	gi|56684452|gb|AY762325.1|betalactams|Class_D_betalactamases|OXA	gi|56684452|gb|AY762325.1|1-1062 gi|939559781|gb|CP012952.1|1232386-1232467 gi|939559781|gb|CP012952.1|2561141-2561222 gi|939559781|gb|CP012952.1|2743155-2743074 gi|939559781|gb|CP012952.1|1035980-1036060 gi|939559781|gb|CP012952.1|1312277-1312197 gi|939559781|gb|CP012952.1|1549317-1549237 gi|939559781|gb|CP012952.1|1673965-1673885 gi|939559781|gb|CP012952.1|1976686-1976766 gi|939559781|gb|CP012952.1|2359896-2359816 gi|939559781|gb|CP012952.1|3581430-3581510 gi|939559781|gb|CP012952.1|3705318-3705238 gi|939559781|gb|CP012952.1|3838592-3838512 gi|939559781|gb|CP012952.1|3855125-3855045 gi|693578048|dbj|AP014649.1|718278-718359 gi|693578048|dbj|AP014649.1|477947-477867 gi|693578048|dbj|AP014649.1|2686880-2686960 gi|693578048|dbj|AP014649.1|2905183-2905103 gi|693578048|dbj|AP014649.1|3755940-3755860 gi|984881271|gb|CP014215.1|432616-432696 gi|984881271|gb|CP014215.1|2332338-2332258 gi|984881271|gb|CP014215.1|2825934-2826014 gi|984881271|gb|CP014215.1|3326705-3326785 gi|984686374|gb|HQ700358.2|8155-8235 gi|974022331|gb|CP013924.1|914680-914600 gi|974022331|gb|CP013924.1|1418214-1418294 gi|974022331|gb|CP013924.1|3335874-3335794 gi|884906331|gb|CP012008.1|45430-45350 gi|884902522|gb|CP012006.1|3691827-3691747 gi|827403829|gb|CP010779.1|3022167-3022087 gi|730910803|gb|KM977710.1|29944-30024
CARD	CARD|phgb|AB917040|736-1135|ARO:3003207|FosK|Fosfomycin|Fosfomycin_thiol_transferases|FOSK	@phgb|AB917040|736-1135|ARO:3003207|FosK [Acinetobacter soli]
NCBI	CARD|phgb|AB917040|736-1135|ARO:3003207|FosK|Fosfomycin|Fosfomycin_thiol_transferases|FOSK	gi|648296171|dbj|AB917040.2|737-1135
ARG-ANNOT	Flq|QnrB15|EU302865|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB15:EU302865:37-681:645
CARD	Flq|QnrB15|EU302865|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EU302865|0-681|ARO:3002730|QnrB15 [Citrobacter freundii]
NCBI	Flq|QnrB15|EU302865|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|161579407|gb|EU302865.1|1-681
Resfinder	Flq|QnrB15|EU302865|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB15_1_EU302865
CARD	gi|698174219|gb|KM087864.1|betalactams|Class_C_betalactamases|MIR	@phgb|KM087864|0-1146|ARO:3002179|MIR-14 [Enterobacter asburiae]
Lahey	gi|698174219|gb|KM087864.1|betalactams|Class_C_betalactamases|MIR	AIT76117.1 KM087864.1:1-1146
NCBI	gi|698174219|gb|KM087864.1|betalactams|Class_C_betalactamases|MIR	gi|698174219|gb|KM087864.1|1-1146
ARG-ANNOT	Bla|VIM-13|DQ365886|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-13:DQ365886:1-801:801
CARD	Bla|VIM-13|DQ365886|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|DQ365886|0-801|ARO:3002283|VIM-13 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-13|DQ365886|1-801|801|betalactams|Class_B_betalactamases|VIM	ABC94518.1 DQ365886.1:1-801
NCBI	Bla|VIM-13|DQ365886|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|257123760|gb|GQ396666.1|5077-5877 gi|148455767|gb|EF577407.1|1181-1981 gi|86279732|gb|DQ365886.1|1-801
Resfinder	Bla|VIM-13|DQ365886|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-13_1_DQ365886
ARG-ANNOT	926|AF337947.1|AF337947|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6-PRIME	(AGly)Aac6-Im:AF337947:1215-1751:537
CARD	926|AF337947.1|AF337947|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6-PRIME	@phgb|AF337947|1214-1751|ARO:3002559|AAC(6')-Ip [Escherichia coli]
NCBI	926|AF337947.1|AF337947|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6-PRIME	gi|14485641|gb|AF337947.1|1215-1751
Resfinder	926|AF337947.1|AF337947|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6-PRIME	aac(6')-Im_1_AF337947
ARG-ANNOT	Bla|OXY2-8|AY055205|182-1054|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-8:AY055205:182-1054:873
CARD	Bla|OXY2-8|AY055205|182-1054|873|betalactams|Class_A_betalactamases|OXY	@phgb|AY055205|181-1054|ARO:3002403|OXY-2-8 [Klebsiella oxytoca]
NCBI	Bla|OXY2-8|AY055205|182-1054|873|betalactams|Class_A_betalactamases|OXY	gi|16506935|gb|AY055205.1|182-1054
Resfinder	Bla|OXY2-8|AY055205|182-1054|873|betalactams|Class_A_betalactamases|OXY	blaOXY-2-8_8_AY055205
NCBI	Tet|tetM_11_JN846696|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|377684503|gb|JN846696.1|237-2156
Resfinder	Tet|tetM_11_JN846696|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_11_JN846696
ARG-ANNOT	Bla|CMY-35|EF394371|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-35:EF394371:1-1146:1146
CARD	Bla|CMY-35|EF394371|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|EF394371|0-1146|ARO:3002046|CMY-35 [Citrobacter freundii]
Lahey	Bla|CMY-35|EF394371|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ABN51007.1 EF394371.1:1-1146
NCBI	Bla|CMY-35|EF394371|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|125664047|gb|EF394371.1|1-1146
Resfinder	Bla|CMY-35|EF394371|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-35_1_EF394371
ARG-ANNOT	gi|695198991|ref|NG_035137.1|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-6:AF030945:1-867:867
NCBI	gi|695198991|ref|NG_035137.1|betalactams|Class_A_betalactamases|CARB	gi|695198991|ref|NG_035137.1|1-967 gi|766547679|gb|KP116299.1|20762-20795 gi|660573358|gb|CP008790.1|155495-155524 gi|800908878|gb|KP345882.1|65833-65805 gi|481190437|gb|JX121641.1|52215-52243
NCBI	gi|56069564|gb|AY822595.1|betalactams|Class_A_betalactamases|CTX	gi|56069564|gb|AY822595.1|1-904 gi|548319340|gb|KF308562.1|1-903
ARG-ANNOT	gi|57491217|gb|AY859529.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-75:AY859529:1-825:825
CARD	gi|57491217|gb|AY859529.1|betalactams|Class_D_betalactamases|OXA	@phgb|NC_010400|1959577-1960402|ARO:3001620|OXA-75 [Acinetobacter baumannii SDF]
Lahey	gi|57491217|gb|AY859529.1|betalactams|Class_D_betalactamases|OXA	AAW51373.1 AY859529.1:1-825
NCBI	gi|57491217|gb|AY859529.1|betalactams|Class_D_betalactamases|OXA	gi|169150821|emb|CU468230.2|1959578-1960402 gi|57491217|gb|AY859529.1|1-825 gi|115252906|emb|AM086637.1|31-852
Resfinder	gi|57491217|gb|AY859529.1|betalactams|Class_D_betalactamases|OXA	blaOXA-75_1_AY859529
NCBI	Bla|AY077486.1|gene1|betalactams|Class_A_betalactamases|OXY	gi|18844713|gb|AY077486.1|120-1056 gi|219920928|emb|FM178426.1|1-825
NCBI	Gly|VanY-D_2_AF175293|Glycopeptides|VanD-type_accessory_protein|VANYD	gi|5759260|gb|AF175293.1|AF175293|2025-3095
Resfinder	Gly|VanY-D_2_AF175293|Glycopeptides|VanD-type_accessory_protein|VANYD	VanY-D_2_AF175293
NCBI	474|unknown_id|unknown_name|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|169647622|gb|EU408346.1|4730-4119
CARD	Flq|QnrB51_1_JX440358|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JX440358|130-775|ARO:3002762|QnrB47 [Citrobacter freundii]
NCBI	Flq|QnrB51_1_JX440358|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|407731545|gb|JX440358.1|131-775
Resfinder	Flq|QnrB51_1_JX440358|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB51_1_JX440358
ARG-ANNOT	Bla|TEM-101|AF495873|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-101:AF495873:1-861:861
CARD	Bla|TEM-101|AF495873|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF495873|0-861|ARO:3000964|TEM-101 [Escherichia coli]
Lahey	Bla|TEM-101|AF495873|1-861|861|betalactams|Class_A_betalactamases|TEM	AAM18924.1 AF495873.1:1-861
NCBI	Bla|TEM-101|AF495873|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|20302878|gb|AF495873.1|1-861
Resfinder	Bla|TEM-101|AF495873|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-101_1_AF495873
NCBI	Sul|NC_010400.5986775|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|169150821|emb|CU468230.2|742749-743600
CARD	Mdr|CP000768.1|gene156|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	@phgb|CP000768|1405391-1406495|ARO:3000783|cmeA [Campylobacter jejuni subsp. doylei 269.97]
NCBI	Mdr|CP000768.1|gene156|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	gi|152938384|gb|CP000768.1|1405392-1406495
ARG-ANNOT	299|FJ349556.1|FJ349556|Glycopeptides|VanM-type_accessory_protein|VANYM	(Gly)VanY-M:FJ349556:3057-3758:702
CARD	299|FJ349556.1|FJ349556|Glycopeptides|VanM-type_accessory_protein|VANYM	@phgb|FJ349556|3056-3758|ARO:3002961|vanYM [Enterococcus faecium]
NCBI	299|FJ349556.1|FJ349556|Glycopeptides|VanM-type_accessory_protein|VANYM	gi|220901852|gb|FJ349556.1|3057-3758
Resfinder	299|FJ349556.1|FJ349556|Glycopeptides|VanM-type_accessory_protein|VANYM	VanY-M_1_FJ349556
ARG-ANNOT	297|FJ349556.1|FJ349556|Glycopeptides|VanM-type_regulator|VANRM	(Gly)VanR-M:FJ349556:982-1680:699
CARD	297|FJ349556.1|FJ349556|Glycopeptides|VanM-type_regulator|VANRM	@phgb|FJ349556|981-1680|ARO:3002928|vanRM [Enterococcus faecium]
NCBI	297|FJ349556.1|FJ349556|Glycopeptides|VanM-type_regulator|VANRM	gi|220901852|gb|FJ349556.1|982-1680
Resfinder	297|FJ349556.1|FJ349556|Glycopeptides|VanM-type_regulator|VANRM	VanR-M_1_FJ349556
ARG-ANNOT	gi|168824138|gb|EU515248.1|betalactams|Class_C_betalactamases|MOX	(Bla)MOX-3:EU515248:1-1149:1149
CARD	gi|168824138|gb|EU515248.1|betalactams|Class_C_betalactamases|MOX	@phgb|EU515248|0-1149|ARO:3002186|MOX-3 [Aeromonas sp. HCUZ 2422275]
Lahey	gi|168824138|gb|EU515248.1|betalactams|Class_C_betalactamases|MOX	ACA30419.1 EU515248.1:1-1149
NCBI	gi|168824138|gb|EU515248.1|betalactams|Class_C_betalactamases|MOX	gi|168824138|gb|EU515248.1|1-1149
Resfinder	gi|168824138|gb|EU515248.1|betalactams|Class_C_betalactamases|MOX	blaMOX-3_1_EU515248
NCBI	gi|1524365|emb|X92507.1|betalactams|Class_A_betalactamases|CTX	gi|697655994|dbj|AB976587.2|4452-5361 gi|695934953|gb|CP007636.1|141150-142059 gi|668347677|dbj|AB976589.1|97-1006 gi|668347674|dbj|AB976588.1|1244-2153 gi|668347663|dbj|AB976586.1|1755-2664 gi|569555425|gb|CP004000.1|131642-132551 gi|695224103|ref|NG_041018.1|570-1479 gi|526482529|gb|KC879156.1|6091-7000 gi|695214733|ref|NG_036899.1|43228-42319 gi|288872174|dbj|AB543701.1|1813-2722
CARD	gi|761662703|gb|KP096412.1|betalactams|Class_B_betalactamases|VIM	@phgb|KP096412|0-801|ARO:3003179|VIM-43 [Pseudomonas aeruginosa]
Lahey	gi|761662703|gb|KP096412.1|betalactams|Class_B_betalactamases|VIM	AJP67511.1 KP096412.1:1-801
NCBI	gi|761662703|gb|KP096412.1|betalactams|Class_B_betalactamases|VIM	gi|761662703|gb|KP096412.1|1-801 gi|825088496|gb|KP975075.1|7975-7820 gi|584292460|gb|KF850517.1|1484-1639 gi|346720643|gb|JF915437.1|900-1055 gi|346720640|gb|JF905459.1|1522-1677 gi|283580179|gb|GU250441.1|953-1108 gi|283580176|gb|GU250440.1|932-1087 gi|270210847|gb|GU181269.1|1564-1719 gi|269978383|gb|GU181265.1|1983-2138 gi|194032844|emb|FM179467.1|1088-1243
ARG-ANNOT	Bla|CTX-M-48|AY847144|82-957|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-48:AY847144:82-957:876
CARD	Bla|CTX-M-48|AY847144|82-957|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY847144|81-957|ARO:3001910|CTX-M-48 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-48|AY847144|82-957|876|betalactams|Class_A_betalactamases|CTX	AAV97953.1 AY847144.1:82-957
NCBI	Bla|CTX-M-48|AY847144|82-957|876|betalactams|Class_A_betalactamases|CTX	gi|56554764|gb|AY847144.1|82-957
Resfinder	Bla|CTX-M-48|AY847144|82-957|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-48_1_AY847144
CARD	CARD|phgb|AY028464|442-1189|ARO:3000840|JOHN-1|betalactams|Class_B_betalactamases|JOHN	@phgb|AY028464|442-1189|ARO:3000840|JOHN-1 beta-lactamase [Flavobacterium johnsoniae UW101]
NCBI	CARD|phgb|AY028464|442-1189|ARO:3000840|JOHN-1|betalactams|Class_B_betalactamases|JOHN	gi|146152184|gb|CP000685.1|4163958-4163211 gi|19879249|gb|AY028464.1|443-1190
ARG-ANNOT	574|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANZA	(Gly)VanZ-Pa:DQ018711:7169-7648:480
NCBI	574|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANZA	gi|66731642|gb|DQ018711.1|7169-7648
Resfinder	574|DQ018711.1|DQ018711|Glycopeptides|VanA-type_accessory_protein|VANZA	VanZ-Pt_4_DQ018711
ARG-ANNOT	Bla|CTX-M-81|EU136031|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-81:EU136031:1-876:876
CARD	Bla|CTX-M-81|EU136031|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|EU136031|0-876|ARO:3001942|CTX-M-81 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-81|EU136031|1-876|876|betalactams|Class_A_betalactamases|CTX	ABV57756.3 EU136031.3:1-876
NCBI	Bla|CTX-M-81|EU136031|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|211774525|gb|EU136031.3|1-876
Resfinder	Bla|CTX-M-81|EU136031|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-81_1_EU136031
CARD	MLS|M74717.1|gene2|MLS|Macrolide_glycosyltransferases|MGT	@phgb|M74717|818-2075|ARO:3000462|mgt [Streptomyces lividans]
NCBI	MLS|M74717.1|gene2|MLS|Macrolide_glycosyltransferases|MGT	gi|153345|gb|M74717.1|STMLRMMGT|819-2075
CARD	CARD|pvgb|CP000647|622039-622621|ARO:3003380|Klebsiella|Multi-drug_resistance|MDR_regulator|RAMR|RequiresSNPConfirmation	@pvgb|CP000647|622039-622621|ARO:3003380|Klebsiella pneumoniae ramR mutants [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
NCBI	CARD|pvgb|CP000647|622039-622621|ARO:3003380|Klebsiella|Multi-drug_resistance|MDR_regulator|RAMR|RequiresSNPConfirmation	gi|979528538|gb|CP014010.1|1434502-1435084 gi|959148571|gb|CP012992.1|1328417-1327835 gi|959142797|gb|CP012987.1|1336812-1336230 gi|742679781|gb|CP006738.1|3837857-3837275 gi|723234405|gb|CP009863.1|1445808-1446390 gi|569550235|gb|CP003999.1|3896869-3896287 gi|549815675|gb|CP006648.1|617592-618174 gi|402539130|gb|CP003785.1|3922020-3921438 gi|297660249|gb|HM036716.1|772-190 gi|297660247|gb|HM036715.1|768-186
CARD	CARD|phgb|GU550123|144-1005|ARO:3001041|TEM-176|betalactams|Class_A_betalactamases|TEM	@phgb|GU550123|144-1005|ARO:3001041|TEM-176 [Escherichia coli]
NCBI	CARD|phgb|GU550123|144-1005|ARO:3001041|TEM-176|betalactams|Class_A_betalactamases|TEM	gi|284468331|gb|GU550123.1|145-1006
CARD	AGly|Aph3_prime-VIa_1_X07753|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|X07753|102-882|ARO:3002652|APH(3')-VIa [Acinetobacter baumannii]
NCBI	AGly|Aph3_prime-VIa_1_X07753|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|827342761|gb|KR055667.1|6912-7691 gi|937077494|gb|KR105777.1|1-780 gi|674252391|gb|CP008739.2|6814509-6815288 gi|668729071|gb|KM051846.1|23300-22521 gi|522376232|gb|CP003848.1|1892-1113 gi|695226605|ref|NG_041543.1|7731-6952 gi|329184518|gb|JF343537.1|999-1778 gi|197725590|gb|EU977572.1|1-780 gi|85376207|gb|DQ315788.1|8248-7469 gi|38662|emb|X07753.1|103-882
Resfinder	AGly|Aph3_prime-VIa_1_X07753|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-VIa_1_X07753
NCBI	gi|134154076|gb|EF468463.1|betalactams|Class_A_betalactamases|TEM	gi|134154076|gb|EF468463.1|1-943
NCBI	gi|591542910|gb|KJ207206.1|betalactams|Class_C_betalactamases|ACT	gi|591542910|gb|KJ207206.1|650-1897
NCBI	Flq|NC_003112.2.903806|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|738778022|gb|KJ415226.1|1-2751 gi|744797373|gb|CP006869.1|9404-6654 gi|325199235|gb|CP002420.1|921641-918891 gi|66731897|gb|AE002098.2|1409972-1412722
ARG-ANNOT	1342|JN104597.1|JN104597|betalactams|Class_B_betalactamases|NDM	(Bla)NDM-5:JN104597:1-813:813
CARD	1342|JN104597.1|JN104597|betalactams|Class_B_betalactamases|NDM	@phgb|JN104597|114-927|ARO:3000467|NDM-5 [Escherichia coli]
Lahey	1342|JN104597.1|JN104597|betalactams|Class_B_betalactamases|NDM	AEN03071.1 JN104597.1:115-927
NCBI	1342|JN104597.1|JN104597|betalactams|Class_B_betalactamases|NDM	gi|975900971|gb|CP014006.1|10716-11528 gi|970338578|gb|KT725789.1|79746-80558 gi|970338460|gb|KT725788.1|85006-85818 gi|951216548|dbj|LC095558.1|1-813 gi|951216540|dbj|LC095554.1|1-813 gi|951216448|dbj|LC095508.1|1-813 gi|951216420|dbj|LC095494.1|1-813 gi|951216412|dbj|LC095490.1|1-813 gi|951216396|dbj|LC095482.1|1-813 gi|951216390|dbj|LC095479.1|1-813
Resfinder	1342|JN104597.1|JN104597|betalactams|Class_B_betalactamases|NDM	blaNDM-5_1_JN104597
CARD	CARD|phgb|AB037671|24420-26427|ARO:3001209|mecC|betalactams|Penicillin_binding_protein|MECC	@phgb|AB037671|24420-26427|ARO:3001209|mecC [Staphylococcus aureus]
NCBI	CARD|phgb|AB037671|24420-26427|ARO:3001209|mecC|betalactams|Penicillin_binding_protein|MECC	gi|14020964|dbj|AB037671.1|24421-26428
NCBI	Bla|SHV-1_13_AF462396|betalactams|Class_A_betalactamases|SHV	gi|18656795|gb|AF462396.1|1-861
Resfinder	Bla|SHV-1_13_AF462396|betalactams|Class_A_betalactamases|SHV	blaSHV-1_13_AF462396
NCBI	Bla|AY077488.2|gene1|betalactams|Class_A_betalactamases|OXY	gi|32130558|gb|AY077488.2|100-1031
ARG-ANNOT	Bla|VEB-5|EF420108|38-937|900|betalactams|Class_A_betalactamases|VEB	(Bla)VEB-5:EF420108:38-937:900
CARD	Bla|VEB-5|EF420108|38-937|900|betalactams|Class_A_betalactamases|VEB	@phgb|EF420108|37-937|ARO:3002375|VEB-5 [Escherichia coli]
Lahey	Bla|VEB-5|EF420108|38-937|900|betalactams|Class_A_betalactamases|VEB	ABN80430.1 EF420108.1:38-937
NCBI	Bla|VEB-5|EF420108|38-937|900|betalactams|Class_A_betalactamases|VEB	gi|126202236|gb|EF420108.1|38-937
Resfinder	Bla|VEB-5|EF420108|38-937|900|betalactams|Class_A_betalactamases|VEB	blaVEB-5_1_EF420108
ARG-ANNOT	Bla|IMP-4|DQ307573|3-743|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-4:DQ307573:3-743:741
NCBI	Bla|IMP-4|DQ307573|3-743|741|betalactams|Class_B_betalactamases|IMP	gi|83583500|gb|DQ307573.1|3-743
Resfinder	Bla|IMP-4|DQ307573|3-743|741|betalactams|Class_B_betalactamases|IMP	blaIMP-4_1_DQ307573
CARD	Mdr|CP000768.1|gene1537|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	@phgb|CP000768|1406494-1409617|ARO:3000784|cmeB [Campylobacter jejuni subsp. doylei 269.97]
NCBI	Mdr|CP000768.1|gene1537|Multi-drug_resistance|Multi-drug_efflux_pumps|cme	gi|152938384|gb|CP000768.1|1406495-1409617
CARD	CARD|phgb|AF173226|1037-2441|ARO:3003067|smeS|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	@phgb|AF173226|1037-2441|ARO:3003067|smeS [Stenotrophomonas maltophilia]
NCBI	CARD|phgb|AF173226|1037-2441|ARO:3003067|smeS|Multi-drug_resistance|Multi-drug_efflux_pumps|sme	gi|5764623|gb|AF173226.1|1038-2442 gi|848254014|gb|CP011854.1|1398804-1398834 gi|338799449|gb|CP002881.1|1421993-1422023 gi|327478612|gb|CP002622.1|1524797-1524827
CARD	CARD|phgb|KC292503|4334-5195|ARO:3000904|TEM-34|betalactams|Class_A_betalactamases|TEM	@phgb|KC292503|4334-5195|ARO:3000904|TEM-34 [Haemophilus parainfluenzae]
NCBI	CARD|phgb|KC292503|4334-5195|ARO:3000904|TEM-34|betalactams|Class_A_betalactamases|TEM	gi|444746817|gb|KC292503.1|4335-5196 gi|523582587|gb|KC844056.1|1-861
CARD	Bla|GES-23_1_KF179354|betalactams|Class_A_betalactamases|GES	@phgb|KF179354|0-861|ARO:3002352|GES-23 [Pseudomonas aeruginosa]
Lahey	Bla|GES-23_1_KF179354|betalactams|Class_A_betalactamases|GES	AGT20529.1 KF179354.1:1-861
NCBI	Bla|GES-23_1_KF179354|betalactams|Class_A_betalactamases|GES	gi|530339846|gb|KF179354.1|1-861
Resfinder	Bla|GES-23_1_KF179354|betalactams|Class_A_betalactamases|GES	blaGES-23_1_KF179354
CARD	CARD|phgb|AF034958|0-1230|ARO:3002698|cmlB|Phenicol|Phenicol_efflux_pumps|CMLB	@phgb|AF034958|0-1230|ARO:3002698|cmlB [Enterobacter aerogenes]
NCBI	CARD|phgb|AF034958|0-1230|ARO:3002698|cmlB|Phenicol|Phenicol_efflux_pumps|CMLB	gi|695213725|ref|NG_036654.1|2642-3871
ARG-ANNOT	Tmt|DfrA28|FM877476|116-589|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA28:FM877476:116-589:474
NCBI	Tmt|DfrA28|FM877476|116-589|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|215262418|emb|FM877476.1|116-589
Resfinder	Tmt|DfrA28|FM877476|116-589|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA28_2_FM877476
Lahey	Bla|KF986262.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30281.1 KF986262.1:852-28
NCBI	Bla|KF986262.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389159|gb|KF986262.1|852-28
CARD	CARD|phgb|AJ584700|33-582|ARO:3002589|AAC6-PRIME-Iid|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AJ584700|33-582|ARO:3002589|AAC(6')-Iid [Enterococcus hirae]
NCBI	CARD|phgb|AJ584700|33-582|ARO:3002589|AAC6-PRIME-Iid|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|46559083|emb|AJ584700.2|34-583
ARG-ANNOT	gi|83628251|gb|DQ309276.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-84:DQ309276:1-825:825
CARD	gi|83628251|gb|DQ309276.1|betalactams|Class_D_betalactamases|OXA	@phgb|DQ309276|0-825|ARO:3001624|OXA-84 [Acinetobacter baumannii]
Lahey	gi|83628251|gb|DQ309276.1|betalactams|Class_D_betalactamases|OXA	ABC26006.1 DQ309276.1:1-825
NCBI	gi|83628251|gb|DQ309276.1|betalactams|Class_D_betalactamases|OXA	gi|83628251|gb|DQ309276.1|1-825
Resfinder	gi|83628251|gb|DQ309276.1|betalactams|Class_D_betalactamases|OXA	blaOXA-84_1_DQ309276
ARG-ANNOT	Bla|CMY-25|EU515249|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-25:EU515249:1-1146:1146
CARD	Bla|CMY-25|EU515249|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|EU515249|0-1146|ARO:3002036|CMY-25 [Klebsiella pneumoniae]
Lahey	Bla|CMY-25|EU515249|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ACA30420.1 EU515249.1:1-1146
NCBI	Bla|CMY-25|EU515249|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|168824140|gb|EU515249.1|1-1146
Resfinder	Bla|CMY-25|EU515249|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-25_1_EU515249
ARG-ANNOT	Bla|GOB-18|DQ004496|1-873|873|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-18:DQ004496:1-873:873
NCBI	Bla|GOB-18|DQ004496|1-873|873|betalactams|Class_B_betalactamases|GOB	gi|66732966|gb|DQ004496.1|1-873
Resfinder	Bla|GOB-18|DQ004496|1-873|873|betalactams|Class_B_betalactamases|GOB	blaGOB-18_1_DQ004496
ARG-ANNOT	700|M29953.1|CAJAPHA7A|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-VIIa:M29953:131-1036:753
CARD	700|M29953.1|CAJAPHA7A|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|M29953|295-1048|ARO:3002654|APH(3')-VIIa [Campylobacter jejuni]
NCBI	700|M29953.1|CAJAPHA7A|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|144186|gb|M29953.1|CAJAPHA7A|296-1048
Resfinder	700|M29953.1|CAJAPHA7A|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-VIIa_1_M29953
ARG-ANNOT	CARD|phgb|AY265889|0-458|ARO:3002477|LEN-14|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-14:AY265889:1-861:861
CARD	CARD|phgb|AY265889|0-458|ARO:3002477|LEN-14|betalactams|Class_A_betalactamases|LEN	@phgb|AY265889|0-458|ARO:3002477|LEN-14 [Enterobacter cloacae]
NCBI	CARD|phgb|AY265889|0-458|ARO:3002477|LEN-14|betalactams|Class_A_betalactamases|LEN	gi|46244165|gb|AY265889.1|1-459
NCBI	Bla|TEM-116_4_GU188444|betalactams|Class_A_betalactamases|TEM	gi|270311271|gb|GU188444.1|1-861
Resfinder	Bla|TEM-116_4_GU188444|betalactams|Class_A_betalactamases|TEM	blaTEM-116_4_GU188444
CARD	CARD|phgb|U37195|75-936|ARO:3000898|TEM-28|betalactams|Class_A_betalactamases|TEM	@phgb|U37195|75-936|ARO:3000898|TEM-28 [Escherichia coli]
NCBI	CARD|phgb|U37195|75-936|ARO:3000898|TEM-28|betalactams|Class_A_betalactamases|TEM	gi|1045658|gb|U37195.1|ECU37195|76-937
NCBI	Rif|CR628337.1|gene378|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|53752796|emb|CR628337.1|419111-423217
NCBI	Rif|AM180355.1|gene120|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|777206699|emb|LN831033.1|81290-85006 gi|733567460|emb|LN614756.1|95455-99171 gi|662237792|emb|LK932983.1|5244-8960 gi|662031635|emb|LK932443.1|5341-9057 gi|662031585|emb|LK932431.1|5329-9045 gi|115249003|emb|AM180355.1|90160-93876
NCBI	Bla|cfxA2_1_AF504914|betalactams|Class_A_betalactamases|CFX	gi|21327012|gb|AF504914.1|1-966
Resfinder	Bla|cfxA2_1_AF504914|betalactams|Class_A_betalactamases|CFX	cfxA2_1_AF504914
CARD	Flq|NC_002952.2859941|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	@pvgb|NC_002952|1419759-1422162|ARO:3003312|Staphylococcus aureus parC conferring resistance to fluoroquinolone [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	Flq|NC_002952.2859941|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|49240382|emb|BX571856.1|1419760-1422162
Lahey	Bla|OXA-114_3_HM104634|betalactams|Class_D_betalactamases|OXA	ADI25069.1 HM104634.1:1-828
NCBI	Bla|OXA-114_3_HM104634|betalactams|Class_D_betalactamases|OXA	gi|297251584|gb|HM104634.1|1-828
Resfinder	Bla|OXA-114_3_HM104634|betalactams|Class_D_betalactamases|OXA	blaOXA-114_3_HM104634
ARG-ANNOT	1247|AY289608.1|AY289608|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-53:AY289608:617-1444:828
CARD	1247|AY289608.1|AY289608|betalactams|Class_D_betalactamases|OXA	@phgb|AY289608|616-1444|ARO:3001810|OXA-53 [Salmonella enterica subsp. enterica serovar Agona]
Lahey	1247|AY289608.1|AY289608|betalactams|Class_D_betalactamases|OXA	AAP43641.1 AY289608.1:617-1444
NCBI	1247|AY289608.1|AY289608|betalactams|Class_D_betalactamases|OXA	gi|31096285|gb|AY289608.1|617-1444
Resfinder	1247|AY289608.1|AY289608|betalactams|Class_D_betalactamases|OXA	blaOXA-53_1_AY289608
ARG-ANNOT	Bla|ACC-4|EF504260|1995-3155|1161|betalactams|Class_C_betalactamases|ACC	(Bla)ACC-4:EF504260:1995-3155:1161
NCBI	Bla|ACC-4|EF504260|1995-3155|1161|betalactams|Class_C_betalactamases|ACC	gi|698174153|gb|KM087831.1|13-1173 gi|284433120|gb|GU256641.1|82963-84123 gi|695216823|ref|NG_037702.1|3155-1995
Resfinder	Bla|ACC-4|EF504260|1995-3155|1161|betalactams|Class_C_betalactamases|ACC	blaACC-4_1_GU256641
Lahey	gi|819332664|gb|KP281294.1|betalactams|Class_C_betalactamases|CMY	AKG51729.1 KP281294.1:1-1146
NCBI	gi|819332664|gb|KP281294.1|betalactams|Class_C_betalactamases|CMY	gi|819332664|gb|KP281294.1|1-1146
NCBI	Bla|JX042489.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|393718030|gb|JX042489.1|1-1002
NCBI	Bla|SHV-11_3_EF035563|betalactams|Class_A_betalactamases|SHV	gi|124053914|gb|EF035563.1|1-861
Resfinder	Bla|SHV-11_3_EF035563|betalactams|Class_A_betalactamases|SHV	blaSHV-11_3_EF035563
ARG-ANNOT	Bla|OXA-62|AY423074|1-858|858|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-62:AY423074:1-858:858
CARD	Bla|OXA-62|AY423074|1-858|858|betalactams|Class_D_betalactamases|OXA	@phgb|AY423074|0-858|ARO:3001792|OXA-62 [Pandoraea pnomenusa]
Lahey	Bla|OXA-62|AY423074|1-858|858|betalactams|Class_D_betalactamases|OXA	AAR32134.1 AY423074.1:1-858
NCBI	Bla|OXA-62|AY423074|1-858|858|betalactams|Class_D_betalactamases|OXA	gi|39843362|gb|AY423074.1|1-858
Resfinder	Bla|OXA-62|AY423074|1-858|858|betalactams|Class_D_betalactamases|OXA	blaOXA-62_1_AY423074
ARG-ANNOT	gi|408535170|dbj|AB753458.1|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-41:AB753458:1-738:738
CARD	gi|408535170|dbj|AB753458.1|betalactams|Class_B_betalactamases|IMP	@phgb|AB753458|0-738|ARO:3002232|IMP-41 [Pseudomonas aeruginosa]
Lahey	gi|408535170|dbj|AB753458.1|betalactams|Class_B_betalactamases|IMP	BAM62795.1 AB753458.1:1-738
NCBI	gi|408535170|dbj|AB753458.1|betalactams|Class_B_betalactamases|IMP	gi|575771362|dbj|AB901034.1|1110-1847 gi|408535170|dbj|AB753458.1|1-738
Resfinder	gi|408535170|dbj|AB753458.1|betalactams|Class_B_betalactamases|IMP	blaIMP-41_1_AB753458
ARG-ANNOT	748|AB364006.1|AB364006|betalactams|Class_B_betalactamases|IMP	(Bla)KHM-1:AB364006:62-787:726
CARD	748|AB364006.1|AB364006|betalactams|Class_B_betalactamases|IMP	@phgb|AB364006|61-787|ARO:3000847|KHM-1 beta-lactamase [Citrobacter freundii]
Lahey	748|AB364006.1|AB364006|betalactams|Class_B_betalactamases|IMP	BAF91108.1 AB364006.1:62-787
NCBI	748|AB364006.1|AB364006|betalactams|Class_B_betalactamases|IMP	gi|918400318|dbj|AP014939.1|135213-135938 gi|695214000|ref|NG_036719.1|775-1500 gi|158392669|dbj|AB364006.1|62-787
Resfinder	748|AB364006.1|AB364006|betalactams|Class_B_betalactamases|IMP	blaKHM-1_1_AB364006
NCBI	gi|81238144|gb|DQ256091.1|betalactams|Class_A_betalactamases|CTX	gi|81238144|gb|DQ256091.1|1-993 gi|291061254|gb|GU477621.1|145-1136 gi|378406451|gb|JN420336.1|243635-243690
ARG-ANNOT	Bla|IND-14|HM367709|8-728|728|betalactams|Class_B_betalactamases|IND	(Bla)IND-14:HM367709:8-728:728
CARD	Bla|IND-14|HM367709|8-728|728|betalactams|Class_B_betalactamases|IND	@phgb|HM367709|7-727|ARO:3002269|IND-14 [Chryseobacterium indologenes]
Lahey	Bla|IND-14|HM367709|8-728|728|betalactams|Class_B_betalactamases|IND	ADK38716.1 HM367709.1:8-727
NCBI	Bla|IND-14|HM367709|8-728|728|betalactams|Class_B_betalactamases|IND	gi|300863226|gb|HM367709.1|8-727
Resfinder	Bla|IND-14|HM367709|8-728|728|betalactams|Class_B_betalactamases|IND	blaIND-14_1_HM367709
NCBI	gi|751813259|gb|KM979378.1|betalactams|Class_D_betalactamases|OXA	gi|751813259|gb|KM979378.1|1-912
NCBI	Sul|sul3_3_AY047357|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|15983740|gb|AY047357.1|63-914
Resfinder	Sul|sul3_3_AY047357|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul3_3_AY047357
ARG-ANNOT	Bla|CMY-20|AY960293|1-1143|1143|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-20:AY960293:1-1143:1143
CARD	Bla|CMY-20|AY960293|1-1143|1143|betalactams|Class_C_betalactamases|CMY	@phgb|AY960293|0-1143|ARO:3002031|CMY-20 [Escherichia coli]
Lahey	Bla|CMY-20|AY960293|1-1143|1143|betalactams|Class_C_betalactamases|CMY	AAX58682.2 AY960293.2:1-1143
NCBI	Bla|CMY-20|AY960293|1-1143|1143|betalactams|Class_C_betalactamases|CMY	gi|108884839|gb|AY960293.2|1-1143
Resfinder	Bla|CMY-20|AY960293|1-1143|1143|betalactams|Class_C_betalactamases|CMY	blaCMY-20_1_AY960293
NCBI	gi|338173764|gb|HQ661362.1|betalactams|Class_A_betalactamases|SHV	gi|338173764|gb|HQ661362.1|72-1011
ARG-ANNOT	Bla|CMY-87|AB699171|1-1143|1143|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-87:AB699171:1-1143:1143
CARD	Bla|CMY-87|AB699171|1-1143|1143|betalactams|Class_C_betalactamases|CMY	@phgb|AB699171|0-1143|ARO:3002100|CMY-87 [Klebsiella pneumoniae]
Lahey	Bla|CMY-87|AB699171|1-1143|1143|betalactams|Class_C_betalactamases|CMY	BAL63057.1 AB699171.1:1-1143
NCBI	Bla|CMY-87|AB699171|1-1143|1143|betalactams|Class_C_betalactamases|CMY	gi|377652326|dbj|AB699171.1|1-1143
Resfinder	Bla|CMY-87|AB699171|1-1143|1143|betalactams|Class_C_betalactamases|CMY	blaCMY-87_1_AB699171
CARD	CARD|phgb|M58472|147-777|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|M58472|147-777|ARO:3002670|cat [Agrobacterium tumefaciens str. C58]
NCBI	CARD|phgb|M58472|147-777|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|159140696|gb|AE007870.2|1905632-1906262 gi|142219|gb|M58472.1|ATUCAT|148-778
NCBI	gi|17887486|gb|AY065991.1|betalactams|Class_A_betalactamases|SHV	gi|695208304|ref|NG_035517.1|1-870
CARD	Mdr|NC_002951.3236526|Multi-drug_resistance|Multi-drug_efflux_pumps|MEPA	@phgb|NC_007795|329363-330719|ARO:3000026|mepA [Staphylococcus aureus subsp. aureus NCTC 8325]
NCBI	Mdr|NC_002951.3236526|Multi-drug_resistance|Multi-drug_efflux_pumps|MEPA	gi|974161314|gb|CP012018.1|382677-384032 gi|974158397|gb|CP012015.1|382684-384039 gi|974155539|gb|CP012013.1|383726-385081 gi|974152716|gb|CP012012.1|382890-384245 gi|974149849|gb|CP012011.1|428721-430076 gi|941146344|gb|CP007676.1|353189-354544 gi|941142962|gb|CP007672.1|377105-378460 gi|941139768|gb|CP007657.1|377582-378937 gi|899756207|gb|CP012119.1|1538686-1537331 gi|899750970|gb|CP012120.1|560915-559560
NCBI	gi|291621298|dbj|AB551737.1|betalactams|Class_A_betalactamases|SHV	gi|291621298|dbj|AB551737.1|1-972
NCBI	962|AY661734.1|AY661734|Multi-drug_resistance|Multi-drug_efflux_pumps|MEPB	gi|974161314|gb|CP012018.1|384136-384576 gi|974158397|gb|CP012015.1|384143-384583 gi|974155539|gb|CP012013.1|385185-385625 gi|974152716|gb|CP012012.1|384349-384789 gi|974149849|gb|CP012011.1|430180-430620 gi|941146344|gb|CP007676.1|354648-355088 gi|941142962|gb|CP007672.1|378564-379004 gi|941139768|gb|CP007657.1|379041-379481 gi|929858715|gb|CP010402.1|362201-362641 gi|899756207|gb|CP012119.1|1537227-1536787
CARD	CARD|pvgb|CP000675|419342-420533|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP000675|419342-420533|ARO:3001312|elfamycin resistant EF-Tu [Legionella pneumophila str. Corby]
NCBI	CARD|pvgb|CP000675|419342-420533|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|225791049|gb|CP000675.2|419343-420534
ARG-ANNOT	Bla|OXA-210|JF795487|1-828|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-210:JF795487:1-828:828
CARD	Bla|OXA-210|JF795487|1-828|828|betalactams|Class_D_betalactamases|OXA	@phgb|JF795487|0-828|ARO:3001487|OXA-210 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-210|JF795487|1-828|828|betalactams|Class_D_betalactamases|OXA	AEE61368.1 JF795487.1:1-828
NCBI	Bla|OXA-210|JF795487|1-828|828|betalactams|Class_D_betalactamases|OXA	gi|332368585|gb|JF795487.1|1-828
Resfinder	Bla|OXA-210|JF795487|1-828|828|betalactams|Class_D_betalactamases|OXA	blaOXA-210_1_JF795487
ARG-ANNOT	gi|340523197|gb|HQ877606.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-197:HQ877606:1-861:861
CARD	gi|340523197|gb|HQ877606.1|betalactams|Class_A_betalactamases|TEM	@phgb|HQ877606|0-861|ARO:3001056|TEM-197 [Klebsiella pneumoniae]
Lahey	gi|340523197|gb|HQ877606.1|betalactams|Class_A_betalactamases|TEM	AEK48085.1 HQ877606.1:1-861
NCBI	gi|340523197|gb|HQ877606.1|betalactams|Class_A_betalactamases|TEM	gi|340523197|gb|HQ877606.1|1-861
Resfinder	gi|340523197|gb|HQ877606.1|betalactams|Class_A_betalactamases|TEM	blaTEM-197_1_HQ877606
NCBI	AGly|GU060319.1|gene3|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|308052966|gb|GU060319.1|975-1766
ARG-ANNOT	gi|351720143|emb|FN556186.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-46:FN556186:1-1146:1146
CARD	gi|351720143|emb|FN556186.1|betalactams|Class_C_betalactamases|CMY	@phgb|FN556186|0-1146|ARO:3002057|CMY-46 [Escherichia coli]
Lahey	gi|351720143|emb|FN556186.1|betalactams|Class_C_betalactamases|CMY	CBH19182.1 FN556186.1:1-1146
NCBI	gi|351720143|emb|FN556186.1|betalactams|Class_C_betalactamases|CMY	gi|351720143|emb|FN556186.1|1-1146
Resfinder	gi|351720143|emb|FN556186.1|betalactams|Class_C_betalactamases|CMY	blaCMY-46_1_FN556186
ARG-ANNOT	gi|448819157|gb|JX049131.1|betalactams|Class_C_betalactamases|FOX	(Bla)FOX-10:JX049131:1-1149:1149
CARD	gi|448819157|gb|JX049131.1|betalactams|Class_C_betalactamases|FOX	@phgb|JX049131|0-1149|ARO:3002162|FOX-10 [Klebsiella pneumoniae]
Lahey	gi|448819157|gb|JX049131.1|betalactams|Class_C_betalactamases|FOX	AGE45503.1 JX049131.1:1-1149
NCBI	gi|448819157|gb|JX049131.1|betalactams|Class_C_betalactamases|FOX	gi|695226827|ref|NG_041572.1|1-1149
Resfinder	gi|448819157|gb|JX049131.1|betalactams|Class_C_betalactamases|FOX	blaFOX-10_1_JX049131
CARD	CARD|phgb|DQ303459|2174-3050|ARO:3001916|CTX-M-54|betalactams|Class_A_betalactamases|CTX	@phgb|DQ303459|2174-3050|ARO:3001916|CTX-M-54 [Klebsiella pneumoniae]
NCBI	CARD|phgb|DQ303459|2174-3050|ARO:3001916|CTX-M-54|betalactams|Class_A_betalactamases|CTX	gi|90019040|gb|DQ303459.3|2175-3051
CARD	CARD|phgb|NC_023287|60996-61860|ARO:3002626|ANT6-Ia|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	@phgb|NC_023287|60996-61860|ARO:3002626|ANT(6)-Ia [Exiguobacterium sp. S3-2]
NCBI	CARD|phgb|NC_023287|60996-61860|ARO:3002626|ANT6-Ia|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|927930179|gb|KP998101.1|8790-7927 gi|927820524|gb|KT448822.1|7397-8260 gi|927820498|gb|KT448821.1|18878-19741 gi|927820473|gb|KT448820.1|18879-19742 gi|927820447|gb|KT448819.1|18880-19743 gi|927820421|gb|KT448818.1|18880-19743 gi|927820398|gb|KT448817.1|18878-19741 gi|927440299|emb|LN879430.1|1566014-1566877 gi|908777994|gb|KR936172.1|18878-19741 gi|818439301|gb|CP007497.1|928946-928083
NCBI	AGly|aadA1_2_FJ591054|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|937354980|gb|KR296704.1|90-881 gi|619497957|gb|KJ170699.1|35929-35138 gi|221047985|gb|FJ591054.1|68-859
Resfinder	AGly|aadA1_2_FJ591054|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA1_2_FJ591054
ARG-ANNOT	1711|unknown_id|unknown_name|betalactams|Class_A_betalactamases|VEB	(Bla)VEB-6:EU259884:6412-7311:900
Lahey	1711|unknown_id|unknown_name|betalactams|Class_A_betalactamases|VEB	ACA34904.1 EU259884.2:7311-6412
NCBI	1711|unknown_id|unknown_name|betalactams|Class_A_betalactamases|VEB	gi|746616518|gb|KF856624.1|33694-32795 gi|549442275|gb|KF501390.1|9200-8301 gi|332000475|gb|HQ888851.1|34047-33148 gi|219814656|gb|EU259884.2|7311-6412
Resfinder	1711|unknown_id|unknown_name|betalactams|Class_A_betalactamases|VEB	blaVEB-6_1_EU259884
NCBI	Sul|AJ310778.1|gene13|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695211993|ref|NG_036308.1|13265-13897 gi|695208285|ref|NG_035514.1|6941-7573 gi|89330179|emb|AM234698.1|11797-12429
ARG-ANNOT	gi|239925270|gb|GQ140348.1|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-10:GQ140348:1-882:882
CARD	gi|239925270|gb|GQ140348.1|betalactams|Class_A_betalactamases|KPC	@phgb|GQ140348|0-882|ARO:3002320|KPC-10 [Acinetobacter baumannii]
Lahey	gi|239925270|gb|GQ140348.1|betalactams|Class_A_betalactamases|KPC	ACS35345.1 GQ140348.1:1-882
NCBI	gi|239925270|gb|GQ140348.1|betalactams|Class_A_betalactamases|KPC	gi|239925270|gb|GQ140348.1|1-882
Resfinder	gi|239925270|gb|GQ140348.1|betalactams|Class_A_betalactamases|KPC	blaKPC-10_1_GQ140348
ARG-ANNOT	1492|unknown_id|unknown_name|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-13:AY339625:3641-4786:1146
Lahey	1492|unknown_id|unknown_name|betalactams|Class_C_betalactamases|CMY	AAQ16660.2 AY339625.2:4786-3641
NCBI	1492|unknown_id|unknown_name|betalactams|Class_C_betalactamases|CMY	gi|695210321|ref|NG_035929.1|4786-3641
Resfinder	1492|unknown_id|unknown_name|betalactams|Class_C_betalactamases|CMY	blaCMY-13_1_AY339625
Lahey	Bla|OXA-114_1_HM368376|betalactams|Class_D_betalactamases|OXA	ADO14463.1 HM368376.1:1-828
NCBI	Bla|OXA-114_1_HM368376|betalactams|Class_D_betalactamases|OXA	gi|308097804|gb|HM368376.1|1-828
Resfinder	Bla|OXA-114_1_HM368376|betalactams|Class_D_betalactamases|OXA	blaOXA-114_1_HM368376
NCBI	Bla|SHV-5_8_AY502004|betalactams|Class_A_betalactamases|SHV	gi|41584435|gb|AY502004.1|1-861 gi|40950643|gb|AY509128.1|1-859
Resfinder	Bla|SHV-5_8_AY502004|betalactams|Class_A_betalactamases|SHV	blaSHV-5_8_AY502004
ARG-ANNOT	Bla|IMP-11|AB074436|17-754|738|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-11:AB074436:17-754:738
CARD	Bla|IMP-11|AB074436|17-754|738|betalactams|Class_B_betalactamases|IMP	@phgb|AB074436|16-754|ARO:3002202|IMP-11 [Acinetobacter baumannii]
Lahey	Bla|IMP-11|AB074436|17-754|738|betalactams|Class_B_betalactamases|IMP	BAB72072.1 AB074436.1:17-754
NCBI	Bla|IMP-11|AB074436|17-754|738|betalactams|Class_B_betalactamases|IMP	gi|575771398|dbj|AB901042.1|653-1390 gi|346644638|dbj|AB625454.1|97-834 gi|17026025|dbj|AB074436.1|17-754
Resfinder	Bla|IMP-11|AB074436|17-754|738|betalactams|Class_B_betalactamases|IMP	blaIMP-11_1_AB074436
NCBI	Bla|CTX-M-65_11_FJ907380|betalactams|Class_A_betalactamases|CTX	gi|237511596|gb|FJ907380.1|1-876
Resfinder	Bla|CTX-M-65_11_FJ907380|betalactams|Class_A_betalactamases|CTX	blaCTX-M-65_11_FJ907380
ARG-ANNOT	gi|166012597|gb|EU375515.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-128:EU375515:1-825:825
CARD	gi|166012597|gb|EU375515.1|betalactams|Class_D_betalactamases|OXA	@phgb|EU375515|0-825|ARO:3001648|OXA-128 [Acinetobacter baumannii]
Lahey	gi|166012597|gb|EU375515.1|betalactams|Class_D_betalactamases|OXA	ABY77907.1 EU375515.1:1-825
NCBI	gi|166012597|gb|EU375515.1|betalactams|Class_D_betalactamases|OXA	gi|166012597|gb|EU375515.1|1-825
Resfinder	gi|166012597|gb|EU375515.1|betalactams|Class_D_betalactamases|OXA	blaOXA-128_1_EU375515
CARD	CARD|phgb|NC_003197|397056-398262|ARO:3000789|mdsA|Multi-drug_resistance|Multi-drug_efflux_pumps|MDSA	@phgb|NC_003197|397056-398262|ARO:3000789|mdsA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	CARD|phgb|NC_003197|397056-398262|ARO:3000789|mdsA|Multi-drug_resistance|Multi-drug_efflux_pumps|MDSA	gi|981191958|emb|LN999997.1|4976212-4975006 gi|973795115|gb|AE006468.2|397058-398264 gi|928084184|gb|CP012681.1|439488-440694 gi|821161554|gb|CP011428.1|437482-438688 gi|808186398|gb|CP007523.1|1171392-1172598 gi|777177758|emb|LN829401.1|2518094-2516888 gi|764057510|gb|CP007235.1|1170012-1171218 gi|674281104|gb|CP009102.1|365450-366656 gi|669110799|gb|CP007804.2|397750-398956 gi|661245796|dbj|AP014565.1|437728-438934
ARG-ANNOT	Bla|OXA-94|DQ519088|9-833|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-94:DQ519088:9-833:825
CARD	Bla|OXA-94|DQ519088|9-833|825|betalactams|Class_D_betalactamases|OXA	@phgb|DQ519088|8-833|ARO:3001629|OXA-94 [Acinetobacter baumannii]
Lahey	Bla|OXA-94|DQ519088|9-833|825|betalactams|Class_D_betalactamases|OXA	ABF47917.1 DQ519088.1:9-833
NCBI	Bla|OXA-94|DQ519088|9-833|825|betalactams|Class_D_betalactamases|OXA	gi|742999896|gb|CP010397.1|2075056-2075880 gi|94960150|gb|DQ519088.1|9-833
Resfinder	Bla|OXA-94|DQ519088|9-833|825|betalactams|Class_D_betalactamases|OXA	blaOXA-94_1_DQ519088
ARG-ANNOT	Bla|CTX-M-42|DQ061159|347-1222|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-42:DQ061159:347-1222:876
CARD	Bla|CTX-M-42|DQ061159|347-1222|876|betalactams|Class_A_betalactamases|CTX	@phgb|DQ061159|346-1222|ARO:3001904|CTX-M-42 [Escherichia coli]
Lahey	Bla|CTX-M-42|DQ061159|347-1222|876|betalactams|Class_A_betalactamases|CTX	AAY84742.1 DQ061159.1:347-1222
NCBI	Bla|CTX-M-42|DQ061159|347-1222|876|betalactams|Class_A_betalactamases|CTX	gi|68012687|gb|DQ061159.1|347-1222
Resfinder	Bla|CTX-M-42|DQ061159|347-1222|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-42_1_DQ061159
NCBI	Tet|tetY_5_AB089606|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETY	gi|29467414|dbj|AB089604.1|1-1176 gi|239829526|gb|FJ950717.1|1-134 gi|239829524|gb|FJ950715.1|115-1
Resfinder	Tet|tetY_5_AB089606|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETY	tet(Y)_5_AB089606
NCBI	gi|751813255|gb|KM979376.1|betalactams|Class_D_betalactamases|OXA	gi|751813255|gb|KM979376.1|1-879
ARG-ANNOT	Bla|OXA-23|EF120522|1499-2320|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-23:EF120622:1499-2320:822
CARD	Bla|OXA-23|EF120522|1499-2320|822|betalactams|Class_D_betalactamases|OXA	@phgb|AY795964|0-822|ARO:3001418|OXA-23 [Acinetobacter baumannii]
Lahey	Bla|OXA-23|EF120522|1499-2320|822|betalactams|Class_D_betalactamases|OXA	CAB69042.1 AJ132105.1:972-1793
NCBI	Bla|OXA-23|EF120522|1499-2320|822|betalactams|Class_D_betalactamases|OXA	gi|984881271|gb|CP014215.1|418243-419064 gi|984881271|gb|CP014215.1|425487-426308 gi|984686374|gb|HQ700358.2|10646-9825 gi|974022331|gb|CP013924.1|1411085-1411906 gi|974022331|gb|CP013924.1|3343003-3342182 gi|972294625|gb|KU168371.1|57-878 gi|958114342|dbj|LC100116.1|1320-2141 gi|939559781|gb|CP012952.1|3836101-3836922 gi|927028356|emb|LN877214.1|1264-2085 gi|884906331|gb|CP012008.1|42939-43760 gi|884902522|gb|CP012006.1|3689336-3690157 gi|830873390|gb|KP888560.1|13460-12639
Resfinder	Bla|OXA-23|EF120522|1499-2320|822|betalactams|Class_D_betalactamases|OXA	blaOXA-23_1_HQ700358
ARG-ANNOT	gi|304368191|gb|HM570036.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-180:HM570036:1-825:825
CARD	gi|304368191|gb|HM570036.1|betalactams|Class_D_betalactamases|OXA	@phgb|HM570036|0-825|ARO:3001474|OXA-180 [Acinetobacter baumannii]
Lahey	gi|304368191|gb|HM570036.1|betalactams|Class_D_betalactamases|OXA	ADM26745.1 HM570036.1:1-825
NCBI	gi|304368191|gb|HM570036.1|betalactams|Class_D_betalactamases|OXA	gi|692145893|gb|CP003967.2|1633266-1632442 gi|304368191|gb|HM570036.1|1-825
Resfinder	gi|304368191|gb|HM570036.1|betalactams|Class_D_betalactamases|OXA	blaOXA-180_1_HM570036
NCBI	Fos|fosB_2_X89875|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	gi|902818782|gb|KP795112.1|915-1334 gi|68448404|dbj|AP006717.1|122-541 gi|927563|emb|X89875.1|38-457
Resfinder	Fos|fosB_2_X89875|Fosfomycin|Fosfomycin_thiol_transferases|FOSB	fosB_2_X89875
NCBI	gi|7595230|gb|AF132290.1|betalactams|Class_A_betalactamases|SHV	gi|7595230|gb|AF132290.1|AF132290|88-983 gi|14532426|gb|AY036620.1|53-88
NCBI	Flq|M58408|gene|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|1363107-1360915 gi|958627747|gb|CP013253.1|257424-259616 gi|939732440|gb|CP011343.2|3140979-3138787 gi|939731527|gb|CP011342.2|3141724-3139532 gi|937526251|gb|CP012870.1|1475749-1477941 gi|937521852|gb|CP012869.1|1475749-1477941 gi|937517453|gb|CP012868.1|1475749-1477941 gi|932857508|emb|LN877770.1|3990239-3988047 gi|923416119|gb|CP011113.1|3122625-3120433 gi|899729770|gb|CP012127.1|3140353-3138161
NCBI	gi|296953|emb|X65253.1|betalactams|Class_A_betalactamases|TEM	gi|296953|emb|X65253.1|175-1044
ARG-ANNOT	gi|155049568|gb|EF581888.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-67:EF581888:1-876:876
CARD	gi|155049568|gb|EF581888.1|betalactams|Class_A_betalactamases|CTX	@phgb|EF581888|0-876|ARO:3001928|CTX-M-67 [Escherichia coli]
Lahey	gi|155049568|gb|EF581888.1|betalactams|Class_A_betalactamases|CTX	ABS90365.1 EF581888.1:1-876
NCBI	gi|155049568|gb|EF581888.1|betalactams|Class_A_betalactamases|CTX	gi|695212744|ref|NG_036484.1|1-876
Resfinder	gi|155049568|gb|EF581888.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-67_1_EF581888
NCBI	Tet|tetC_6_Y19114|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	gi|961454907|gb|KT991389.1|1310-173 gi|961454907|gb|KT991389.1|3654-3683 gi|627769342|gb|KF195927.1|6870-5733 gi|669174522|dbj|AB775653.1|67-1204 gi|507466429|dbj|AB777650.1|505-1642 gi|507466429|dbj|AB777650.1|2190-2283 gi|507466429|dbj|AB777650.1|2337-2280 gi|507466420|dbj|AB777647.1|2247-1110 gi|507466420|dbj|AB777647.1|562-469 gi|507466420|dbj|AB777647.1|415-472 gi|496543269|gb|KC820641.1|3911-5048 gi|496543253|gb|KC820640.1|3910-5047 gi|448967488|gb|KC562906.1|5372-6509 gi|358444205|gb|JN381160.1|95-1232 gi|346421642|gb|JN204911.1|1285-2422
CARD	CARD|phgb|GQ343019|132-1023|ARO:3002999|CblA-1|betalactams|Class_A_betalactamases|CBLA	@phgb|GQ343019|132-1023|ARO:3002999|CblA-1 [mixed culture bacterium AX_gF3SD01_15]
NCBI	CARD|phgb|GQ343019|132-1023|ARO:3002999|CblA-1|betalactams|Class_A_betalactamases|CBLA	gi|254966955|gb|GQ343070.1|91-982 gi|254966950|gb|GQ343068.1|985-1876 gi|254966947|gb|GQ343067.1|2137-3028 gi|254966812|gb|GQ343019.1|133-1024 gi|383842798|gb|JN625767.1|1-891
ARG-ANNOT	184|KF823969.1|KF823969|Glycopeptides|VanB-type_regulator|VANRB	(Gly)VanR-B:AY655721:69-728:660
NCBI	184|KF823969.1|KF823969|Glycopeptides|VanB-type_regulator|VANRB	gi|577698901|gb|KF823969.1|314-973 gi|577698893|gb|KF823968.1|314-973 gi|452996210|gb|KC489787.1|1-660 gi|529202214|gb|CP006620.1|770130-770789 gi|403219365|emb|HE963029.1|46349-47008 gi|378937014|gb|CP003351.1|2845193-2844534 gi|229463101|gb|FJ767776.1|314-973 gi|216409875|dbj|AB374546.1|32627-33286 gi|80973263|gb|AY655721.2|69-728 gi|80973252|gb|AY655720.2|69-728
NCBI	gi|94960154|gb|DQ519090.1|betalactams|Class_D_betalactamases|OXA	gi|94960154|gb|DQ519090.1|1-911 gi|300244960|gb|GU911349.1|6390-6476 gi|300244960|gb|GU911349.1|2423-2379 gi|971493847|gb|CP010351.1|395920-395964 gi|827342761|gb|KR055667.1|3539-3495 gi|442769248|gb|JX101647.1|56497-56541 gi|544205277|gb|KF208466.1|2584-2540 gi|522376232|gb|CP003848.1|48892-48848 gi|441494717|gb|JX968506.1|589-633 gi|695226605|ref|NG_041543.1|2470-2426 gi|695226596|ref|NG_041542.1|4614-4570
ARG-ANNOT	Bla|SHV-99|AM922305|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-99:AM922305:1-861:861
CARD	Bla|SHV-99|AM922305|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM941845|0-861|ARO:3001337|SHV-99 [Klebsiella pneumoniae]
Lahey	Bla|SHV-99|AM922305|1-861|861|betalactams|Class_A_betalactamases|SHV	CAQ03504.1 AM941845.1:1-861
NCBI	Bla|SHV-99|AM922305|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|218091982|emb|AM922305.1|1-861
Resfinder	Bla|SHV-99|AM922305|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-99_1_AM941845
NCBI	Tet|tetA_6_AJ313332|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|14547129|emb|AJ313332.1|990-2189
Resfinder	Tet|tetA_6_AJ313332|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tet(A)_6_AJ313332
NCBI	gi|158713821|gb|EF417572.2|betalactams|Class_C_betalactamases|MIR	gi|695212938|ref|NG_036521.1|30-1188
ARG-ANNOT	Bla|CMY-54|HM544039|1-1152|1152|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-54:HM544039:1-1152:1152
CARD	Bla|CMY-54|HM544039|1-1152|1152|betalactams|Class_C_betalactamases|CMY	@phgb|HM544039|0-1152|ARO:3002065|CMY-54 [Escherichia coli]
Lahey	Bla|CMY-54|HM544039|1-1152|1152|betalactams|Class_C_betalactamases|CMY	ADK55604.1 HM544039.1:1-1152
NCBI	Bla|CMY-54|HM544039|1-1152|1152|betalactams|Class_C_betalactamases|CMY	gi|301071043|gb|HM544039.1|1-1152
Resfinder	Bla|CMY-54|HM544039|1-1152|1152|betalactams|Class_C_betalactamases|CMY	blaCMY-54_1_HM544039
ARG-ANNOT	AGly|Ant6-Ia|AF330699|22-930|909|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	(AGly)Ant6-Ia:AF330699:22-930:909
NCBI	AGly|Ant6-Ia|AF330699|22-930|909|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	gi|974161314|gb|CP012018.1|406305-407213 gi|974158397|gb|CP012015.1|406312-407220 gi|974155539|gb|CP012013.1|407354-408262 gi|974152716|gb|CP012012.1|406515-407423 gi|974149849|gb|CP012011.1|452355-453263 gi|827342679|gb|KR066794.1|11948-11040 gi|938507137|gb|KP842560.1|1618-2526 gi|929858715|gb|CP010402.1|53929-54837 gi|777211012|emb|LN831036.1|53413-54321 gi|749389159|gb|KJ645709.1|43933-44841
Resfinder	AGly|Ant6-Ia|AF330699|22-930|909|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT6	ant(6)-Ia_1_AF330699
ARG-ANNOT	gi|315456453|emb|FN645444.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-50:FN645444:1-1146:1146
CARD	gi|315456453|emb|FN645444.1|betalactams|Class_C_betalactamases|CMY	@phgb|FN645444|0-1146|ARO:3002061|CMY-50 [Escherichia coli]
Lahey	gi|315456453|emb|FN645444.1|betalactams|Class_C_betalactamases|CMY	CBI75447.1 FN645444.1:1-1146
NCBI	gi|315456453|emb|FN645444.1|betalactams|Class_C_betalactamases|CMY	gi|315456453|emb|FN645444.1|1-1146
CARD	gi|668583077|gb|KJ775801.1|betalactams|Class_A_betalactamases|KPC	@phgb|KJ775801|0-882|ARO:3002329|KPC-19 [Klebsiella pneumoniae subsp. pneumoniae]
Lahey	gi|668583077|gb|KJ775801.1|betalactams|Class_A_betalactamases|KPC	AIH07017.1 KJ775801.1:1-882
NCBI	gi|668583077|gb|KJ775801.1|betalactams|Class_A_betalactamases|KPC	gi|668583077|gb|KJ775801.1|1-882
NCBI	Elf|CP000647.1|gene3761|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|958102843|emb|LN824133.1|4926954-4925770 gi|723249485|gb|CP009876.1|4751273-4750089 gi|150953431|gb|CP000647.1|4070920-4069736
ARG-ANNOT	Bla|TEM-152|DQ834728|206-1066|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-152:DQ834728:206-1066:861
CARD	Bla|TEM-152|DQ834728|206-1066|861|betalactams|Class_A_betalactamases|TEM	@phgb|DQ834728|205-1066|ARO:3001019|TEM-152 [Escherichia coli]
Lahey	Bla|TEM-152|DQ834728|206-1066|861|betalactams|Class_A_betalactamases|TEM	ABI74447.1 DQ834728.1:206-1066
NCBI	Bla|TEM-152|DQ834728|206-1066|861|betalactams|Class_A_betalactamases|TEM	gi|114386381|gb|DQ834728.1|206-1066 gi|808157946|gb|KP870110.1|4250-4200
Resfinder	Bla|TEM-152|DQ834728|206-1066|861|betalactams|Class_A_betalactamases|TEM	blaTEM-152_1_DQ834728
ARG-ANNOT	Bla|SHV-105|FJ194944|47-907|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-105:FJ194944:47-907:861
CARD	Bla|SHV-105|FJ194944|47-907|861|betalactams|Class_A_betalactamases|SHV	@phgb|FJ194944|46-907|ARO:3001154|SHV-105 [Klebsiella pneumoniae]
Lahey	Bla|SHV-105|FJ194944|47-907|861|betalactams|Class_A_betalactamases|SHV	ACI22621.1 FJ194944.1:47-907
NCBI	Bla|SHV-105|FJ194944|47-907|861|betalactams|Class_A_betalactamases|SHV	gi|206813968|gb|FJ194944.1|47-907 gi|14532426|gb|AY036620.1|53-88
Resfinder	Bla|SHV-105|FJ194944|47-907|861|betalactams|Class_A_betalactamases|SHV	blaSHV-105_1_FJ194944
Lahey	Bla|SHV-1_1_DQ166783|betalactams|Class_A_betalactamases|SHV	AAZ98828.1 DQ166783.1:1-861
NCBI	Bla|SHV-1_1_DQ166783|betalactams|Class_A_betalactamases|SHV	gi|74058440|gb|DQ166783.1|1-861
Resfinder	Bla|SHV-1_1_DQ166783|betalactams|Class_A_betalactamases|SHV	blaSHV-1_1_DQ166783
ARG-ANNOT	Bla|OXA-115|EU029998|576-1400|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-115:EU029998:576-1400:825
CARD	Bla|OXA-115|EU029998|576-1400|825|betalactams|Class_D_betalactamases|OXA	@phgb|EU029998|575-1400|ARO:3001440|OXA-115 [Acinetobacter baumannii]
Lahey	Bla|OXA-115|EU029998|576-1400|825|betalactams|Class_D_betalactamases|OXA	ABS71123.1 EU029998.1:576-1400
NCBI	Bla|OXA-115|EU029998|576-1400|825|betalactams|Class_D_betalactamases|OXA	gi|154201556|gb|EU029998.1|576-1400
Resfinder	Bla|OXA-115|EU029998|576-1400|825|betalactams|Class_D_betalactamases|OXA	blaOXA-115_1_EU029998
ARG-ANNOT	Bla|LEN-15|AF452105|1-840|840|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-15:AF452105:1-840:840
CARD	Bla|LEN-15|AF452105|1-840|840|betalactams|Class_A_betalactamases|LEN	@phgb|AF452105|0-840|ARO:3002478|LEN-15 [Klebsiella pneumoniae]
NCBI	Bla|LEN-15|AF452105|1-840|840|betalactams|Class_A_betalactamases|LEN	gi|17980761|gb|AF452105.1|AF452105|1-840
Resfinder	Bla|LEN-15|AF452105|1-840|840|betalactams|Class_A_betalactamases|LEN	blaLEN15_1_AF452105
NCBI	gi|379056275|dbj|AB700703.1|betalactams|Class_A_betalactamases|TEM	gi|379056275|dbj|AB700703.1|1-1022
NCBI	253|unknown_id|unknown_name|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|159140696|gb|AE007870.2|1328236-1327589 gi|3860030|gb|AF090987.1|AF090987|1041-394
ARG-ANNOT	Tet|TetJ|AF038993|1084-2280|1197|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETJ	(Tet)TetJ:AF038993:1084-2280:1197
CARD	Tet|TetJ|AF038993|1084-2280|1197|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETJ	@phgb|AF038993|0-1197|ARO:3000177|tetJ [Proteus mirabilis]
NCBI	Tet|TetJ|AF038993|1084-2280|1197|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETJ	gi|4104704|gb|AF038993.1|AF038993|1084-2280
Resfinder	Tet|TetJ|AF038993|1084-2280|1197|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETJ	tet(J)_2_AF038993
CARD	Mdr|NC_011586.7046390|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEB	@phgb|NC_011595|1830078-1833186|ARO:3000775|adeB [Acinetobacter baumannii AB307-0294]
NCBI	Mdr|NC_011586.7046390|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEB	gi|787858845|gb|CP008706.1|1976932-1980039 gi|751410783|gb|CP010781.1|2023835-2020728 gi|213985689|gb|CP001172.1|1830079-1833186 gi|213054530|gb|CP001182.1|2162362-2159255 gi|169147133|emb|CU459141.1|1886524-1889631 gi|88758847|emb|CT025812.2|4-3111
CARD	1137|JN596991.2|JN596991|betalactams|Class_B_betalactamases|IMP	@phgb|JN596991|482-1223|ARO:3002209|IMP-18 [Pseudomonas aeruginosa]
NCBI	1137|JN596991.2|JN596991|betalactams|Class_B_betalactamases|IMP	gi|530452818|gb|KC907377.1|659-1399 gi|365269065|gb|JN596991.2|483-1223
CARD	CARD|phgb|AJ511268|1294-1765|ARO:3002531|AAC3-Ic|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|AJ511268|1294-1765|ARO:3002531|AAC(3)-Ic [Pseudomonas aeruginosa]
NCBI	CARD|phgb|AJ511268|1294-1765|ARO:3002531|AAC3-Ic|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|513139112|gb|KC776907.1|72-543 gi|385282930|gb|JQ414040.1|117-588 gi|265509427|gb|GQ161847.1|7122-7593 gi|113201888|gb|DQ899759.1|117-588 gi|30141364|emb|AJ511268.1|1295-1766
ARG-ANNOT	835|AF155139.2|AF155139|Glycopeptides|VanF-type_resistance_protein|VANXF	(Gly)VanXE-Pp:AF155139:6977-7648:672
CARD	835|AF155139.2|AF155139|Glycopeptides|VanF-type_resistance_protein|VANXF	@phgb|AF155139|6976-7648|ARO:3002952|vanXF [Paenibacillus popilliae ATCC 14706]
NCBI	835|AF155139.2|AF155139|Glycopeptides|VanF-type_resistance_protein|VANXF	gi|284517203|gb|GU299525.1|205-876 gi|40363824|gb|AF155139.2|6977-7648
Resfinder	835|AF155139.2|AF155139|Glycopeptides|VanF-type_resistance_protein|VANXF	VanX-E_1_AF155139
CARD	CARD|pvgb|AL123456|7301-9818|ARO:3003295|Mycobacterium|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	@pvgb|AL123456|7301-9818|ARO:3003295|Mycobacterium tuberculosis gyrA conferring resistance to fluoroquinolones [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|AL123456|7301-9818|ARO:3003295|Mycobacterium|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|984950177|gb|CP010330.1|7302-9819 gi|984945858|gb|CP010329.1|7302-9819 gi|749193065|gb|CP007027.1|7302-9819 gi|690310687|gb|CP009480.1|7302-9819 gi|559794742|gb|CP003248.2|7302-9819 gi|444893469|emb|AL123456.3|7302-9819 gi|148503909|gb|CP000611.1|7302-9819 gi|405113337|gb|JX303241.1|1-2517
NCBI	Sul|CP003248.2|gene3759|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|4064332-4063490 gi|984989958|gb|CP010339.1|4037458-4036616 gi|984985728|gb|CP010338.1|4055038-4054196 gi|984981517|gb|CP010337.1|4039899-4039057 gi|984976917|gb|CP010336.1|4045913-4045071 gi|984972452|gb|CP010335.1|4057600-4056758 gi|984967653|gb|CP010334.1|4028694-4027852 gi|984963331|gb|CP010333.1|4027779-4026937 gi|984959134|gb|CP010332.1|3983974-3983132 gi|984954355|gb|CP010331.1|4006044-4005202
NCBI	353|unknown_id|unknown_name|Glycopeptides|VanO-type_regulator|VANSO	gi|557879499|gb|KF478993.1|5947-4910 gi|675824235|gb|CP009215.1|1899085-1899057
ARG-ANNOT	gi|154425490|dbj|AB284167.2|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-64:GQ300937:269-1114:876
CARD	gi|154425490|dbj|AB284167.2|betalactams|Class_A_betalactamases|CTX	@phgb|AB284167|225-1101|ARO:3001925|CTX-M-64 [Shigella sonnei]
Lahey	gi|154425490|dbj|AB284167.2|betalactams|Class_A_betalactamases|CTX	BAF63422.1 AB284167.2:226-1101
NCBI	gi|154425490|dbj|AB284167.2|betalactams|Class_A_betalactamases|CTX	gi|756420290|gb|KP091735.1|9237-8362 gi|696185197|gb|KJ020576.1|9237-8362 gi|668347723|dbj|AB976601.1|1247-2122 gi|499070017|gb|KC576517.1|239-1114 gi|256576425|gb|GQ456156.1|242-1117 gi|256576421|gb|GQ300937.1|239-1114 gi|695212724|ref|NG_036481.1|226-1101 gi|856991516|gb|KP698227.1|1-768
Resfinder	gi|154425490|dbj|AB284167.2|betalactams|Class_A_betalactamases|CTX	blaCTX-M-64_1_GQ456156
CARD	CARD|phgb|BX664015|204137-204554|ARO:3000168|tetD|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETD	@phgb|BX664015|204137-204554|ARO:3000168|tetD [Serratia marcescens]
NCBI	CARD|phgb|BX664015|204137-204554|ARO:3000168|tetD|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETD	gi|953946047|emb|LN908249.1|1548051-1548468 gi|951285167|emb|LN869922.1|883665-884082 gi|949881887|gb|CP012931.1|27445-27028 gi|917657445|gb|KR827684.1|36037-36454 gi|909636483|emb|LN850163.1|115916-116333 gi|857118485|gb|CP011223.1|1685453-1685036 gi|834763093|gb|CP006636.1|350111-350528 gi|828386350|gb|CP006635.1|152452-152869 gi|825091926|gb|KP789020.1|133462-133879 gi|808208366|gb|CP009232.1|108020-107603
CARD	gi|698174215|gb|KM087862.1|betalactams|Class_C_betalactamases|MIR	@phgb|KM087862|0-1146|ARO:3002178|MIR-13 [Enterobacter asburiae]
Lahey	gi|698174215|gb|KM087862.1|betalactams|Class_C_betalactamases|MIR	AIT76115.1 KM087862.1:1-1146
NCBI	gi|698174215|gb|KM087862.1|betalactams|Class_C_betalactamases|MIR	gi|698174215|gb|KM087862.1|1-1146
Lahey	Bla|OXA-114_6_HM056040|betalactams|Class_D_betalactamases|OXA	ADI23933.1 HM056040.1:1-828
NCBI	Bla|OXA-114_6_HM056040|betalactams|Class_D_betalactamases|OXA	gi|690299662|gb|CP009448.1|4178677-4179504 gi|297179872|gb|HM056040.1|1-828
Resfinder	Bla|OXA-114_6_HM056040|betalactams|Class_D_betalactamases|OXA	blaOXA-114_6_HM056040
CARD	gi|478437784|gb|KC465200.1|betalactams|Class_A_betalactamases|KPC	@phgb|KC465200|0-882|ARO:3002327|KPC-17 [Klebsiella pneumoniae]
Lahey	gi|478437784|gb|KC465200.1|betalactams|Class_A_betalactamases|KPC	AGJ01154.1 KC465200.1:1-882
NCBI	gi|478437784|gb|KC465200.1|betalactams|Class_A_betalactamases|KPC	gi|478437784|gb|KC465200.1|1-882
NCBI	Flq|NC_012469.1.7685406|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|909837468|gb|CP003357.2|1328560-1326080 gi|556027507|gb|CP006844.1|1248487-1246007 gi|298237097|gb|CP001993.1|1511745-1509265 gi|225726369|gb|CP000921.1|1289966-1287486
CARD	CARD|phgb|NC_007907|4208791-4209754|ARO:3003725|VanXI|Glycopeptides|VanI-type_resistance_protein|VANXI	@phgb|NC_007907|4208791-4209754|ARO:3003725|VanXI [Desulfitobacterium hafniense]
NCBI	CARD|phgb|NC_007907|4208791-4209754|ARO:3003725|VanXI|Glycopeptides|VanI-type_resistance_protein|VANXI	gi|698315210|emb|LK996017.1|4149904-4150866 gi|89332194|dbj|AP008230.1|4208792-4209754 gi|339287872|gb|CP002902.1|2175733-2175705
CARD	gi|4581956|emb|Y10693.2|betalactams|Class_D_betalactamases|OXA	@phgb|Y10693|0-828|ARO:3001416|OXA-21 [Acinetobacter baumannii]
Lahey	gi|4581956|emb|Y10693.2|betalactams|Class_D_betalactamases|OXA	CAA71699.2 Y10693.2:1-828
NCBI	gi|4581956|emb|Y10693.2|betalactams|Class_D_betalactamases|OXA	gi|4581956|emb|Y10693.2|1-828
ARG-ANNOT	AGly|AadB|JQ690540|4275-4808|534|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	(AGly)AadB:JQ690540:4275-4808:534;(AGly)Ant''Ia:GQ388247:7505-8038:543
CARD	AGly|AadB|JQ690540|4275-4808|534|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	@phgb|AF078527|3769-4303|ARO:3000230|ANT(2'')-Ia [Pseudomonas aeruginosa]
NCBI	AGly|AadB|JQ690540|4275-4808|534|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	gi|974141864|gb|KT362173.1|1513-2046 gi|974141864|gb|KT362173.1|3013-3546 gi|973585379|gb|KP054476.2|32738-33271 gi|959190351|gb|CP013324.1|126611-126078 gi|957647579|dbj|AP017302.1|414124-413591 gi|806639032|gb|KM972597.1|1179-1712 gi|927928821|gb|KP754010.1|1503-2036 gi|927928813|gb|KP754009.1|1723-2256 gi|922665209|gb|KP892525.1|107-640 gi|847027229|gb|KR827036.1|79-612 gi|828958653|gb|CP011632.1|41987-42520
Resfinder	AGly|AadB|JQ690540|4275-4808|534|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	aadB_1_JN119852
NCBI	Flq|NC_010400.5986734|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|169150821|emb|CU468230.2|799373-802087
CARD	CARD|phgb|DQ212986|7030-7795|ARO:3003069|vanXYG|Glycopeptides|VanG-type_resistance_protein|VANXYG	@phgb|DQ212986|7030-7795|ARO:3003069|vanXYG [Enterococcus faecalis]
NCBI	CARD|phgb|DQ212986|7030-7795|ARO:3003069|vanXYG|Glycopeptides|VanG-type_resistance_protein|VANXYG	gi|762041216|gb|KF697366.1|39741-40506 gi|672937785|gb|KF686317.1|39741-40506 gi|674114364|gb|CP007573.1|765595-766360 gi|674107077|gb|CP007570.1|643851-644616 gi|77380191|gb|DQ212986.1|7031-7796 gi|33355827|gb|AY271782.1|22095-22860 gi|9718996|gb|AF253562.2|AF253562|4761-5526 gi|692189312|gb|KF722997.1|1894-2658
NCBI	Bla|SHV-5_6_EF653399|betalactams|Class_A_betalactamases|SHV	gi|158518994|gb|EF653399.1|353-1213
Resfinder	Bla|SHV-5_6_EF653399|betalactams|Class_A_betalactamases|SHV	blaSHV-5_6_EF653399
ARG-ANNOT	gi|296939581|gb|HM066995.1|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-11:HM066995:1-882:882
CARD	gi|296939581|gb|HM066995.1|betalactams|Class_A_betalactamases|KPC	@phgb|HM066995|0-882|ARO:3002321|KPC-11 [Klebsiella pneumoniae]
Lahey	gi|296939581|gb|HM066995.1|betalactams|Class_A_betalactamases|KPC	ADH95186.1 HM066995.1:1-882
NCBI	gi|296939581|gb|HM066995.1|betalactams|Class_A_betalactamases|KPC	gi|695224200|ref|NG_041039.1|1-882
Resfinder	gi|296939581|gb|HM066995.1|betalactams|Class_A_betalactamases|KPC	blaKPC-11_1_HM066995
NCBI	Flq|NC_007622.3794231|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|82655308|emb|AJ938182.1|1321963-1324365
NCBI	gi|21541782|gb|AF516719.1|betalactams|Class_A_betalactamases|TEM	gi|21541782|gb|AF516719.1|1-1080 gi|961666360|gb|KT185451.1|87740-87690
ARG-ANNOT	Tet|TetB|AB089594|1-1206|1206|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	(Tet)TetB:AB089594:1-1206:1206
NCBI	Tet|TetB|AB089594|1-1206|1206|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	gi|29467394|dbj|AB089594.1|1-1206
NCBI	gi|591389143|gb|KF986254.1|betalactams|Class_D_betalactamases|OXA	gi|591389143|gb|KF986254.1|1-871
NCBI	Tet|tetM_2_X90939|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|909837468|gb|CP003357.2|1835472-1837391 gi|556027507|gb|CP006844.1|1758283-1760202 gi|183217285|gb|EU351020.1|23041-21122 gi|259906609|gb|FJ711160.1|5910-3991 gi|225726369|gb|CP000921.1|1797283-1799202 gi|169636207|dbj|AB426620.1|14972-16891 gi|975709|emb|X90939.1|2098-4017
Resfinder	Tet|tetM_2_X90939|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_2_X90939
CARD	CARD|phgb|M19530|415-1186|ARO:3002878|BcII|betalactams|Class_B_betalactamases|BCII	@phgb|M19530|415-1186|ARO:3002878|BcII [Bacillus cereus]
NCBI	CARD|phgb|M19530|415-1186|ARO:3002878|BcII|betalactams|Class_B_betalactamases|BCII	gi|143127|gb|M19530.1|BACLACB2|416-1187
NCBI	gi|313586334|gb|HQ529916.1|betalactams|Class_A_betalactamases|TEM	gi|313586334|gb|HQ529916.1|1-1020
NCBI	gi|14532426|gb|AY036620.1|betalactams|Class_A_betalactamases|SHV	gi|14532426|gb|AY036620.1|53-978 gi|14532426|gb|AY036620.1|89-124 gi|959190351|gb|CP013324.1|103683-103718 gi|828982914|gb|CP011656.1|56532-56567 gi|828965798|gb|CP011640.1|21109-21144 gi|828958653|gb|CP011632.1|57041-57076 gi|828952302|gb|CP011622.1|131229-131194 gi|828945263|gb|CP011614.1|45611-45646 gi|828939458|gb|CP011609.1|21460-21495 gi|828933472|gb|CP011599.1|56057-56092 gi|562889814|gb|KF585141.1|48-83
CARD	gi|70906549|gb|DQ102702.1|betalactams|Class_A_betalactamases|CTX	@phgb|DQ102702|0-876|ARO:3001905|CTX-M-43 [Acinetobacter baumannii]
Lahey	gi|70906549|gb|DQ102702.1|betalactams|Class_A_betalactamases|CTX	AAZ14955.1 DQ102702.1:1-876
NCBI	gi|70906549|gb|DQ102702.1|betalactams|Class_A_betalactamases|CTX	gi|70906549|gb|DQ102702.1|1-876
Resfinder	gi|70906549|gb|DQ102702.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-43_1_DQ102702
ARG-ANNOT	Bla|CTX-M-110|JF274242|1-877|877|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-110:JF274242:1-877:877
CARD	Bla|CTX-M-110|JF274242|1-877|877|betalactams|Class_A_betalactamases|CTX	@phgb|JF274242|0-877|ARO:3001970|CTX-M-110 [Shigella sp. SH165]
Lahey	Bla|CTX-M-110|JF274242|1-877|877|betalactams|Class_A_betalactamases|CTX	AEM44648.1 JF274242.1:1-877
NCBI	Bla|CTX-M-110|JF274242|1-877|877|betalactams|Class_A_betalactamases|CTX	gi|343480063|gb|JF274242.1|1-877
Resfinder	Bla|CTX-M-110|JF274242|1-877|877|betalactams|Class_A_betalactamases|CTX	blaCTX-M-110_1_JF274242
ARG-ANNOT	Bla|SHV-2|AF148851|6-866|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-2:AF148851:6-866:861
CARD	Bla|SHV-2|AF148851|6-866|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF148851|5-866|ARO:3001060|SHV-2 [Escherichia coli]
NCBI	Bla|SHV-2|AF148851|6-866|861|betalactams|Class_A_betalactamases|SHV	gi|5002313|gb|AF148851.1|AF148851|6-867 gi|675218243|emb|FO818745.1|22121-21261 gi|295917911|gb|GU732836.1|13-873 gi|110264421|gb|DQ449578.1|81847-80987 gi|695210228|ref|NG_035915.1|1-861 gi|695200097|ref|NG_035376.1|1441-2301 gi|43789|emb|X53433.1|931-1791 gi|150488|gb|M95179.1|P60BETALAC|187-1047
CARD	CARD|phgb|AM183304|208-1069|ARO:3001017|TEM-150|betalactams|Class_A_betalactamases|TEM	@phgb|AM183304|208-1069|ARO:3001017|TEM-150 [Escherichia coli]
NCBI	CARD|phgb|AM183304|208-1069|ARO:3001017|TEM-150|betalactams|Class_A_betalactamases|TEM	gi|208970778|gb|FJ349255.1|215-1076 gi|166157193|emb|AM183304.1|209-1070
ARG-ANNOT	1322|HM640278.2|HM640278|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-182:HM640278:1-828:828
CARD	1322|HM640278.2|HM640278|betalactams|Class_D_betalactamases|OXA	@phgb|HM640278|0-828|ARO:3001709|OXA-182 [Acinetobacter baumannii]
Lahey	1322|HM640278.2|HM640278|betalactams|Class_D_betalactamases|OXA	ADK92148.1 HM640278.2:1-828
NCBI	1322|HM640278.2|HM640278|betalactams|Class_D_betalactamases|OXA	gi|390629113|gb|JQ964242.1|21-848 gi|353167147|gb|HM640278.2|1-828
NCBI	AGly|aadA1_2_JN815078|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|982894792|gb|KT368820.1|854-1645 gi|974022331|gb|CP013924.1|2758701-2757910 gi|971533857|gb|KT362048.1|1360-2151 gi|970697631|gb|KT935446.1|95252-94461 gi|949881887|gb|CP012931.1|171790-172581 gi|944398239|gb|CP013025.1|2323437-2324228 gi|939537618|gb|KR610434.1|1600-2391 gi|806639039|gb|KM972598.1|2692-3483 gi|806639024|gb|KM972596.1|2696-3487 gi|806639015|gb|KM972595.1|3231-4022
Resfinder	AGly|aadA1_2_JN815078|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA1_2_JN815078
NCBI	Sul|sul1_21_AJ971344|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695200623|ref|NG_036153.1|6755-7594
Resfinder	Sul|sul1_21_AJ971344|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_21_AJ971344
NCBI	Rif|NC_010410.6003841|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|787858845|gb|CP008706.1|3655363-3651275 gi|751410783|gb|CP010781.1|366873-370961 gi|213985689|gb|CP001172.1|3464497-3460409 gi|213054530|gb|CP001182.1|388660-392748 gi|169147133|emb|CU459141.1|3547925-3543837
NCBI	gi|13272527|gb|AF332513.1|betalactams|Class_A_betalactamases|TEM	gi|13272527|gb|AF332513.1|AF332513|1-964
ARG-ANNOT	547|GU831565.1|GU831565|betalactams|Class_B_betalactamases|SPM	(Bla)SPM-1:GU831565:1-831:831
NCBI	547|GU831565.1|GU831565|betalactams|Class_B_betalactamases|SPM	gi|937559777|gb|KT454971.1|77913-77083 gi|806935701|gb|KP299160.1|24835-24005 gi|294769299|gb|GU831554.1|1-831 gi|38260154|gb|AY341249.1|2291-3121 gi|24528422|emb|AJ492820.1|405-1235 gi|307949947|gb|HM370523.1|1-789 gi|417381510|gb|JX912485.1|1-719 gi|417381484|gb|JX870518.1|1-715 gi|417381488|gb|JX870520.1|1-705 gi|417381490|gb|JX870521.1|1-691
Resfinder	547|GU831565.1|GU831565|betalactams|Class_B_betalactamases|SPM	blaSPM-1_1_AY341249
ARG-ANNOT	gi|2959389|emb|Y16785.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-12:FR716828:847-1992:1146
CARD	gi|2959389|emb|Y16785.1|betalactams|Class_C_betalactamases|CMY	@phgb|Y16785|0-1143|ARO:3002023|CMY-12 [Proteus mirabilis]
Lahey	gi|2959389|emb|Y16785.1|betalactams|Class_C_betalactamases|CMY	CAA76382.1 Y16785.1:1-1143
NCBI	gi|2959389|emb|Y16785.1|betalactams|Class_C_betalactamases|CMY	gi|317449042|emb|FR716828.1|847-1989 gi|2959389|emb|Y16785.1|1-1143
Resfinder	gi|2959389|emb|Y16785.1|betalactams|Class_C_betalactamases|CMY	blaCMY-12_1_Y16785
CARD	CARD|phgb|NC_002516|2208168-2211306|ARO:3002983|amrB|Multi-drug_resistance|Multi-drug_efflux_pumps|AMRB	@phgb|NC_002516|2208168-2211306|ARO:3002983|amrB [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516|2208168-2211306|ARO:3002983|amrB|Multi-drug_resistance|Multi-drug_efflux_pumps|AMRB	gi|926451317|emb|LN871187.1|3307670-3304532 gi|553895034|gb|CP006832.1|2208164-2211302 gi|553886202|gb|CP006831.1|2208164-2211302 gi|543879514|gb|CP006705.1|2208052-2211190 gi|110227054|gb|AE004091.2|2208169-2211307 gi|6502949|gb|AF147719.1|AF147719|5363-2225
NCBI	Bla|TEM-18_1_JF910132|betalactams|Class_A_betalactamases|TEM	gi|981191958|emb|LN999997.1|2513287-2512427 gi|975048878|gb|CP013962.1|4121685-4120825 gi|973715451|gb|CP013836.1|137763-138623 gi|973705327|gb|CP013832.1|76064-76924 gi|971339514|gb|CP006662.2|50825-51685 gi|943457735|gb|KT818627.1|33069-33929 gi|970338578|gb|KT725789.1|75462-76322 gi|970338460|gb|KT725788.1|80722-81582 gi|962148759|gb|KT002541.1|3910-4770 gi|961666360|gb|KT185451.1|17735-16875
Resfinder	Bla|TEM-18_1_JF910132|betalactams|Class_A_betalactamases|TEM	blaTEM-1B_1_JF910132
Lahey	Bla|KF986253.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30272.1 KF986253.1:840-16
NCBI	Bla|KF986253.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389141|gb|KF986253.1|840-16
ARG-ANNOT	Bla|ACT-10|JN848330|1-1146|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-10:JN848330:1-1146:1146
CARD	Bla|ACT-10|JN848330|1-1146|1146|betalactams|Class_C_betalactamases|ACT	@phgb|JN848330|0-1146|ARO:3001832|ACT-10 [Serratia marcescens]
Lahey	Bla|ACT-10|JN848330|1-1146|1146|betalactams|Class_C_betalactamases|ACT	AEV91214.1 JN848330.1:1-1146
NCBI	Bla|ACT-10|JN848330|1-1146|1146|betalactams|Class_C_betalactamases|ACT	gi|359952867|gb|JN848330.1|1-1146
Resfinder	Bla|ACT-10|JN848330|1-1146|1146|betalactams|Class_C_betalactamases|ACT	blaACT-10_1_JN848330
ARG-ANNOT	461|AF024601.1|AF024601|betalactams|Class_A_betalactamases|FAR1	(Bla)FAR-1:AF024601:303-1196:894
NCBI	461|AF024601.1|AF024601|betalactams|Class_A_betalactamases|FAR1	gi|2565294|gb|AF024601.1|AF024601|303-1196
Resfinder	461|AF024601.1|AF024601|betalactams|Class_A_betalactamases|FAR1	blaFAR-1_1_AF024601
ARG-ANNOT	gi|14588992|emb|AJ277415.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-86:AJ277415:1-861:861
CARD	gi|14588992|emb|AJ277415.1|betalactams|Class_A_betalactamases|TEM	@phgb|AJ277415|0-861|ARO:3000953|TEM-86 [Klebsiella pneumoniae]
Lahey	gi|14588992|emb|AJ277415.1|betalactams|Class_A_betalactamases|TEM	CAC43230.1 AJ277415.1:1-861
NCBI	gi|14588992|emb|AJ277415.1|betalactams|Class_A_betalactamases|TEM	gi|695208061|ref|NG_035472.1|1-861
Resfinder	gi|14588992|emb|AJ277415.1|betalactams|Class_A_betalactamases|TEM	blaTEM-86_1_AJ277415
ARG-ANNOT	gi|8118289|gb|AF255921.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-1:JQ682867:1-831:831;(Bla)OXA-30:HM998988:991-1821:831
CARD	gi|8118289|gb|AF255921.1|betalactams|Class_D_betalactamases|OXA	@phgb|AJ746361|13193-14024|ARO:3001396|OXA-1 [Salmonella enterica subsp. enterica serovar Typhimurium]
Lahey	gi|8118289|gb|AF255921.1|betalactams|Class_D_betalactamases|OXA	AAA91586.2 J02967.2:1359-2189
NCBI	gi|8118289|gb|AF255921.1|betalactams|Class_D_betalactamases|OXA	gi|970698242|gb|KT988020.1|12677-11847 gi|970698093|gb|KT988018.1|10565-9735 gi|973710347|gb|CP013833.1|69128-69958 gi|971339514|gb|CP006662.2|38841-39671 gi|966626646|gb|CP013657.1|131483-132313 gi|960865004|gb|CP012043.1|3218446-3217616 gi|937637492|gb|KT334335.1|115730-116560 gi|937292495|gb|CP012753.1|613418-614248 gi|929916870|gb|KR822247.1|11257-12087 gi|918462945|gb|KP987215.1|23253-22423
Resfinder	gi|8118289|gb|AF255921.1|betalactams|Class_D_betalactamases|OXA	blaOXA-1_1_J02967
CARD	CARD|phgb|AB429270|14-1160|ARO:3002052|CMY-41|betalactams|Class_C_betalactamases|CMY	@phgb|AB429270|14-1160|ARO:3002052|CMY-41 [Citrobacter freundii]
NCBI	CARD|phgb|AB429270|14-1160|ARO:3002052|CMY-41|betalactams|Class_C_betalactamases|CMY	gi|171362755|dbj|AB429270.1|15-1161
ARG-ANNOT	Bla|AER-1|U14748|325-1239|915|betalactams|Class_A_betalactamases|AER	(Bla)AER-1:U14748:325-1239:915;(Bla)AER1:U14748:325-1239:915
CARD	Bla|AER-1|U14748|325-1239|915|betalactams|Class_A_betalactamases|AER	@phgb|U14748|324-1239|ARO:3002481|AER-1 [Aeromonas hydrophila]
NCBI	Bla|AER-1|U14748|325-1239|915|betalactams|Class_A_betalactamases|AER	gi|2992468|gb|U14748.1|AHU14748|325-1239
Resfinder	Bla|AER-1|U14748|325-1239|915|betalactams|Class_A_betalactamases|AER	blaAER-1_1_U14748
ARG-ANNOT	Flq|OqxBgb|EU370913|47851-51003|3153|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXB	(Flq)OqxBgb:EU370913:47851-51003:3153
NCBI	Flq|OqxBgb|EU370913|47851-51003|3153|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXB	gi|975048878|gb|CP013962.1|234891-231739 gi|971338783|gb|CP006659.2|4170898-4174050 gi|961494526|gb|KT282968.1|25575-22423 gi|928083869|gb|CP012682.1|122578-125730 gi|902619892|gb|CP011989.1|1230784-1227632 gi|902613520|gb|CP011985.1|1231998-1228846 gi|902606058|gb|CP011976.1|1201200-1198048 gi|902598956|gb|CP011980.1|1211722-1208570 gi|820773184|gb|KM877269.1|76354-73202 gi|834762928|gb|CP006642.1|38041-34889
Resfinder	Flq|OqxBgb|EU370913|47851-51003|3153|Multi-drug_resistance|Multi-drug_efflux_pumps|OQXB	oqxB_1_EU370913
CARD	1434|AB522969.1|AB522969|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	@phgb|AB522969|0-399|ARO:3002874|FosC2 [Escherichia coli]
NCBI	1434|AB522969.1|AB522969|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|787518906|gb|KM877517.1|10044-10442 gi|695214666|ref|NG_036872.1|1-399
Resfinder	1434|AB522969.1|AB522969|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosC_1_AB522969
CARD	13|L11616.1|PSEENVCD|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXB	@phgb|L11616|1569-4710|ARO:3000378|mexB [Pseudomonas aeruginosa]
NCBI	13|L11616.1|PSEENVCD|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXB	gi|438852|gb|L11616.1|PSEENVCD|1570-4710
ARG-ANNOT	AGly|Flqn|Aac6Ib-cr|EF636461|1124-1642|519|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly/Flqn)Aac6Ib-cr:EF636461:1124-1642:519
NCBI	AGly|Flqn|Aac6Ib-cr|EF636461|1124-1642|519|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|933686720|gb|KT315927.1|12169-11651 gi|929916870|gb|KR822247.1|10608-11126 gi|909893998|gb|CP012168.1|196568-196050 gi|825088700|gb|KP975077.1|92967-93485 gi|767032702|gb|KM204147.1|8363-8881 gi|686483930|gb|KM111264.1|289-807 gi|516560672|gb|JX515587.1|4577-5095 gi|516560572|gb|JX469383.1|4577-5095 gi|573041304|gb|KF730245.1|41-559 gi|571430855|gb|KF793937.1|22991-23509
Resfinder	AGly|Flqn|Aac6Ib-cr|EF636461|1124-1642|519|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')Ib-cr_2_EF636461;aac(6')Ib-cr_2_EF636461
ARG-ANNOT	954|M97297.1|TRNVAN|Glycopeptides|VanA-type_regulator|VANSA	(Gly)VanS-A:M97297:4649-5803:1155
CARD	954|M97297.1|TRNVAN|Glycopeptides|VanA-type_regulator|VANSA	@phgb|M97297|4649-5803|ARO:3002931|vanSA [Enterococcus faecium]
NCBI	954|M97297.1|TRNVAN|Glycopeptides|VanA-type_regulator|VANSA	gi|975002886|gb|CP013996.1|674-1828 gi|925192758|gb|CP012594.1|36090-34936 gi|830872341|gb|KR349520.1|4404-5558 gi|695226492|ref|NG_041525.1|4485-5639 gi|359465430|dbj|AB611033.1|15782-14628 gi|319739722|gb|HQ115078.1|22097-20943 gi|695224489|ref|NG_041086.1|9081-7927 gi|304325020|gb|GQ484956.1|26130-27284 gi|304324978|gb|GQ484955.1|25534-26688 gi|304324937|gb|GQ484954.1|20859-22013
Resfinder	954|M97297.1|TRNVAN|Glycopeptides|VanA-type_regulator|VANSA	VanS-A_2_M97297
ARG-ANNOT	1106|AY248038.1|AY248038|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-9:AY248038:2073-2939:867
CARD	1106|AY248038.1|AY248038|betalactams|Class_A_betalactamases|CARB	@phgb|AY248038|2072-2939|ARO:3002248|CARB-9 [Vibrio cholerae non-O1/non-O139]
Lahey	1106|AY248038.1|AY248038|betalactams|Class_A_betalactamases|CARB	AAP22374.1 AY248038.1:2073-2939
NCBI	1106|AY248038.1|AY248038|betalactams|Class_A_betalactamases|CARB	gi|42567123|gb|AY248038.1|2073-2939
Resfinder	1106|AY248038.1|AY248038|betalactams|Class_A_betalactamases|CARB	blaCARB-9_1_AY248038
ARG-ANNOT	Bla|SHV-147|JX121114|1-858|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-147:JX121114:1-858:858
CARD	Bla|SHV-147|JX121114|1-858|858|betalactams|Class_A_betalactamases|SHV	@phgb|JX121114|0-858|ARO:3001186|SHV-147 [Klebsiella pneumoniae]
Lahey	Bla|SHV-147|JX121114|1-858|858|betalactams|Class_A_betalactamases|SHV	AFQ23953.1 JX121114.1:1-858
NCBI	Bla|SHV-147|JX121114|1-858|858|betalactams|Class_A_betalactamases|SHV	gi|401871152|gb|JX121114.1|1-858
Resfinder	Bla|SHV-147|JX121114|1-858|858|betalactams|Class_A_betalactamases|SHV	blaSHV-147_1_JX121114
ARG-ANNOT	Bla|cfiA6|AB087231|1-750|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA6:AB087231:1-750:750;(Bla)CfiA16:FM200792:1845-2594:750;(Bla)cfi6A1:FM200792
NCBI	Bla|cfiA6|AB087231|1-750|750|betalactams|Class_B_betalactamases|CFIA	gi|238908272|emb|FM200792.1|1845-2594 gi|22091067|dbj|AB087231.1|1-750
Resfinder	Bla|cfiA6|AB087231|1-750|750|betalactams|Class_B_betalactamases|CFIA	cfiA6_1_AB087231
NCBI	Flq|NC_003098.1.934295|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|25307955|gb|AE007317.1|752241-754721 gi|116075884|gb|CP000410.1|759772-762252
ARG-ANNOT	1258|HQ693810.1|HQ693810|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-9:HQ693810:1009-2151:1143
CARD	1258|HQ693810.1|HQ693810|betalactams|Class_C_betalactamases|ACT	@phgb|HQ693810|1008-2151|ARO:3001826|ACT-9 [Pantoea agglomerans]
Lahey	1258|HQ693810.1|HQ693810|betalactams|Class_C_betalactamases|ACT	AEI70575.1 HQ693810.1:1009-2151
NCBI	1258|HQ693810.1|HQ693810|betalactams|Class_C_betalactamases|ACT	gi|337730153|gb|HQ693810.1|1009-2151
Resfinder	1258|HQ693810.1|HQ693810|betalactams|Class_C_betalactamases|ACT	blaACT-9_1_HQ693810
NCBI	gi|340937393|gb|JF896803.1|betalactams|Class_C_betalactamases|FOX	gi|340937393|gb|JF896803.1|1-1159
ARG-ANNOT	Bla|OXA-247|JX893517|1-786|786|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-247:JX893517:1-786:786
CARD	Bla|OXA-247|JX893517|1-786|786|betalactams|Class_D_betalactamases|OXA	@phgb|JX893517|0-786|ARO:3001791|OXA-247 [Klebsiella pneumoniae]
Lahey	Bla|OXA-247|JX893517|1-786|786|betalactams|Class_D_betalactamases|OXA	AGC70814.1 JX893517.1:1-786
NCBI	Bla|OXA-247|JX893517|1-786|786|betalactams|Class_D_betalactamases|OXA	gi|695227219|ref|NG_041623.1|1-786
Resfinder	Bla|OXA-247|JX893517|1-786|786|betalactams|Class_D_betalactamases|OXA	blaOXA-247_1_JX893517
ARG-ANNOT	gi|218091987|emb|AM922307.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-106:AM941847:1-861:861
CARD	gi|218091987|emb|AM922307.1|betalactams|Class_A_betalactamases|SHV	@phgb|AM941847|0-861|ARO:3001155|SHV-106 [Klebsiella pneumoniae]
Lahey	gi|218091987|emb|AM922307.1|betalactams|Class_A_betalactamases|SHV	CAP58290.1 AM922307.1:1-861
NCBI	gi|218091987|emb|AM922307.1|betalactams|Class_A_betalactamases|SHV	gi|218091987|emb|AM922307.1|1-861
Resfinder	gi|218091987|emb|AM922307.1|betalactams|Class_A_betalactamases|SHV	blaSHV-106_1_AM922307
ARG-ANNOT	AGly|Aac6-IIb|L06163|532-1074|543|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-IIb:L06163:532-1074:543
CARD	AGly|Aac6-IIb|L06163|532-1074|543|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|L06163|531-1074|ARO:3002595|AAC(6')-IIb [Pseudomonas fluorescens]
NCBI	AGly|Aac6-IIb|L06163|532-1074|543|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|150950|gb|L06163.1|PSEAAC|532-1074
Resfinder	AGly|Aac6-IIb|L06163|532-1074|543|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-IIb_1_L06163
NCBI	Sul|sul1_2_CP002151|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|984881271|gb|CP014215.1|2292290-2291364 gi|984881271|gb|CP014215.1|2305054-2304128 gi|970698242|gb|KT988020.1|22548-23474 gi|970698221|gb|KT988019.1|7360-8286 gi|970698093|gb|KT988018.1|115034-115960 gi|974752094|gb|KT164809.1|6041-5115 gi|974751547|gb|KU130294.1|238739-237813 gi|974751547|gb|KU130294.1|233386-234001 gi|974751143|gb|KU238092.1|13115-12189 gi|975048878|gb|CP013962.1|2821810-2822736 gi|974255378|gb|CP008857.1|6671196-6672122 gi|974022331|gb|CP013924.1|1441443-1442369 gi|974022331|gb|CP013924.1|2757492-2756566
Resfinder	Sul|sul1_2_CP002151|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_2_CP002151
ARG-ANNOT	Bla|OKP-A-2|AJ635404|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-2:AJ635404::1-861:861
CARD	Bla|OKP-A-2|AJ635404|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AJ635404|0-861|ARO:3002419|OKP-A-2 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-2|AJ635404|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|76057846|emb|AJ635404.2|1-861
Resfinder	Bla|OKP-A-2|AJ635404|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-2_1_AM051139
CARD	CARD|phgb|NC_007779|1745170-1746544|ARO:3001327|mdtK|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTK	@phgb|NC_007779|1745170-1746544|ARO:3001327|mdtK [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|NC_007779|1745170-1746544|ARO:3001327|mdtK|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTK	gi|985000614|gb|CP014225.1|4582381-4583755 gi|958627747|gb|CP013253.1|1673213-1671839 gi|939732440|gb|CP011343.2|1724438-1725812 gi|939731527|gb|CP011342.2|1725147-1726521 gi|937526251|gb|CP012870.1|2898215-2896841 gi|937521852|gb|CP012869.1|2898215-2896841 gi|937517453|gb|CP012868.1|2898208-2896834 gi|932857508|emb|LN877770.1|2106918-2108292 gi|923416119|gb|CP011113.1|1707096-1708470 gi|857137982|gb|CP011495.1|2996931-2998305
NCBI	gi|281021928|gb|GU206353.1|betalactams|Class_B_betalactamases|IND	gi|281021928|gb|GU206353.1|1-746
CARD	CARD|pvgb|NC_002952|590830-594382|ARO:3003287|Staphylococcus|Lipopeptides|Daptomycin-resistant_beta-subunit_of_RNA_polymerase_RpoB|rpoB|RequiresSNPConfirmation	@pvgb|NC_002952|590830-594382|ARO:3003285|Staphylococcus aureus rpoB mutants conferring resistance to rifampicin [Staphylococcus aureus subsp. aureus MRSA252];@pvgb|NC_002952|590830-594382|ARO:3003287|Staphylococcus aureus rpoB mutants conferring resistance to daptomycin [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	CARD|pvgb|NC_002952|590830-594382|ARO:3003287|Staphylococcus|Lipopeptides|Daptomycin-resistant_beta-subunit_of_RNA_polymerase_RpoB|rpoB|RequiresSNPConfirmation	gi|703576232|gb|CP009554.1|537360-540911 gi|49240382|emb|BX571856.1|590831-594382
ARG-ANNOT	Flq|Qnr-S1|AB187515|9737-10393|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	(Flq)Qnr-S1:AB187515:9737-10393:657
CARD	Flq|Qnr-S1|AB187515|9737-10393|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	@phgb|DQ449578|0-657|ARO:3002790|QnrS1 [Klebsiella pneumoniae]
NCBI	Flq|Qnr-S1|AB187515|9737-10393|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	gi|908778063|gb|KT005457.1|27144-27800 gi|918043810|gb|CP010383.2|83127-82471 gi|820773739|gb|KP400525.1|48351-47695 gi|806639060|gb|KM023153.1|62787-62131 gi|762041641|gb|KJ201886.1|39561-38905 gi|762041406|gb|KM660724.1|23701-24357 gi|751372783|gb|KP008371.1|36666-36010 gi|746616740|gb|KJ187751.1|23003-22347 gi|746616705|gb|KJ187750.1|2354-3010 gi|742993611|gb|CP010385.1|41553-42209
Resfinder	Flq|Qnr-S1|AB187515|9737-10393|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRS	QnrS1_1_AB187515
NCBI	gi|260178851|gb|GQ870432.1|betalactams|Class_A_betalactamases|CTX	gi|260178851|gb|GQ870432.1|1-913
ARG-ANNOT	Bla|OXA-172|HM113558|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-172:HM113558:1-825:825
CARD	Bla|OXA-172|HM113558|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HM113558|0-825|ARO:3001656|OXA-172 [Acinetobacter baumannii]
Lahey	Bla|OXA-172|HM113558|1-825|825|betalactams|Class_D_betalactamases|OXA	ADI58616.1 HM113558.1:1-825
NCBI	Bla|OXA-172|HM113558|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|298113019|gb|HM113558.1|1-825
Resfinder	Bla|OXA-172|HM113558|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-172_1_HM113558
NCBI	Bla|KC292503.1|gene5|betalactams|Class_A_betalactamases|TEM	gi|444746817|gb|KC292503.1|4217-5195 gi|392513885|gb|JQ783055.1|2643-2841 gi|981191958|emb|LN999997.1|2513351-2513298 gi|975048878|gb|CP013962.1|4121749-4121696 gi|973715451|gb|CP013836.1|137699-137752 gi|973705327|gb|CP013832.1|76000-76053 gi|971339514|gb|CP006662.2|50761-50814 gi|943457735|gb|KT818627.1|33005-33058 gi|970338578|gb|KT725789.1|75398-75451 gi|970338460|gb|KT725788.1|80658-80711
ARG-ANNOT	Bla|FONA-4|AJ251242|1054-1941|888|betalactams|Class_A_betalactamases|FONA	(Bla)FONA-4:AJ251242:1054-1941:888
NCBI	Bla|FONA-4|AJ251242|1054-1941|888|betalactams|Class_A_betalactamases|FONA	gi|6468744|emb|AJ251242.1|1054-1941
Resfinder	Bla|FONA-4|AJ251242|1054-1941|888|betalactams|Class_A_betalactamases|FONA	blaFONA-4_1_AJ251242
NCBI	Gly|VanA-C_5_EU151754|Glycopeptides|VanC-type_resistance_protein|VANC	gi|161779857|gb|EU151754.1|29-1081
Resfinder	Gly|VanA-C_5_EU151754|Glycopeptides|VanC-type_resistance_protein|VANC	VanC_5_EU151754
CARD	Bla|AF244145.1|gene1|betalactams|Class_B_betalactamases|IMP	@phgb|AF244145|0-741|ARO:3002195|IMP-4 [Acinetobacter baumannii]
Lahey	Bla|AF244145.1|gene1|betalactams|Class_B_betalactamases|IMP	AAK13078.1 AF244145.1:1-741
NCBI	Bla|AF244145.1|gene1|betalactams|Class_B_betalactamases|IMP	gi|974137695|dbj|LC107606.1|1002-1742 gi|970567974|dbj|LC107424.1|81-821 gi|827747829|gb|AF288045.3|1369-2109 gi|763906886|gb|KF680003.1|3464-4204 gi|704486078|gb|KM977631.1|26557-27297 gi|558708306|gb|HQ419285.1|2043-2783 gi|555235253|gb|KF250428.1|102523-103263 gi|407809840|gb|JX457479.1|26557-27297 gi|402715290|gb|JX101693.1|56121-56861 gi|695215005|ref|NG_036923.1|1619-2359
Resfinder	Bla|AF244145.1|gene1|betalactams|Class_B_betalactamases|IMP	blaIMP-4_1_AF244145
CARD	348|KF478993.1|KF478993|Glycopeptides|VanA-type_resistance_protein|VANHA	@phgb|KF478993|490-1543|ARO:3002948|vanHO [Rhodococcus equi]
NCBI	348|KF478993.1|KF478993|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|557879499|gb|KF478993.1|491-1543
NCBI	Tmt|dfrA1_25_AJ844287|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|71060395|emb|AJ844287.1|118-591
Resfinder	Tmt|dfrA1_25_AJ844287|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA1_25_AJ844287
ARG-ANNOT	Bla|CTX-M-53|NC_011604|5892-6767|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-53:NC_011604:5892-6767:876
CARD	Bla|CTX-M-53|NC_011604|5892-6767|876|betalactams|Class_A_betalactamases|CTX	@phgb|DQ268764|5891-6767|ARO:3001915|CTX-M-53 [Salmonella enterica subsp. enterica serovar Westhampton]
Lahey	Bla|CTX-M-53|NC_011604|5892-6767|876|betalactams|Class_A_betalactamases|CTX	ABB72225.1 DQ268764.2:5892-6767
NCBI	Bla|CTX-M-53|NC_011604|5892-6767|876|betalactams|Class_A_betalactamases|CTX	gi|215276680|gb|DQ268764.2|5892-6767
Resfinder	Bla|CTX-M-53|NC_011604|5892-6767|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-53_1_DQ268764
CARD	CARD|phgb|JX524191|395-1271|ARO:3002324|KPC-14|betalactams|Class_A_betalactamases|KPC	@phgb|JX524191|395-1271|ARO:3002324|KPC-14 [Klebsiella pneumoniae]
NCBI	CARD|phgb|JX524191|395-1271|ARO:3002324|KPC-14|betalactams|Class_A_betalactamases|KPC	gi|409974861|gb|JX524191.1|396-1272
CARD	Bla|AY524276.3|gene1|betalactams|Class_C_betalactamases|SRT	@phgb|AY524276|0-1137|ARO:3002494|SRT-2 [Serratia marcescens]
NCBI	Bla|AY524276.3|gene1|betalactams|Class_C_betalactamases|SRT	gi|71842624|gb|AY524276.3|1-1137
NCBI	gi|342219561|gb|JN211012.1|betalactams|Class_A_betalactamases|TEM	gi|342219561|gb|JN211012.1|1-1074
NCBI	Bla|SHV-1_7_GU083598|betalactams|Class_A_betalactamases|SHV	gi|256033059|gb|GQ380692.1|1-861
Resfinder	Bla|SHV-1_7_GU083598|betalactams|Class_A_betalactamases|SHV	blaSHV-1_7_GU083598
NCBI	gi|160948452|emb|AM176554.2|betalactams|Class_A_betalactamases|SHV	gi|160948452|emb|AM176554.2|1-891
ARG-ANNOT	Bla|SHV-5|x55640|112-972|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-5:X55640:112-972:861;(Bla)SHV-129:HM125687:1-861:861
CARD	Bla|SHV-5|x55640|112-972|861|betalactams|Class_A_betalactamases|SHV	@phgb|X55640|111-972|ARO:3001064|SHV-5 [Klebsiella pneumoniae]
Lahey	Bla|SHV-5|x55640|112-972|861|betalactams|Class_A_betalactamases|SHV	CAA39164.1 X55640.1:112-972
NCBI	Bla|SHV-5|x55640|112-972|861|betalactams|Class_A_betalactamases|SHV	gi|846281090|gb|KP294351.1|15259-16119 gi|846280946|gb|KP294350.1|15260-16120 gi|800908535|gb|KM406490.1|73373-74233 gi|723258375|gb|CP009883.1|264241-265101 gi|723243622|gb|CP009869.1|124337-123477 gi|678126431|gb|KJ541681.1|27825-26965 gi|662716651|gb|CP008824.1|264940-264080 gi|640855459|gb|CP007732.1|217272-216412 gi|619739382|gb|CP007558.1|217261-216401 gi|407810043|gb|JQ824049.1|16399-15539
Resfinder	Bla|SHV-5|x55640|112-972|861|betalactams|Class_A_betalactamases|SHV	blaSHV-129_2_HM125687
NCBI	Bla|blaB-3_1_AF189301|betalactams|Class_B_betalactamases|BLAB	gi|9587061|gb|AF189301.1|AF189301|1-750
Resfinder	Bla|blaB-3_1_AF189301|betalactams|Class_B_betalactamases|BLAB	blaB-3_1_AF189301
ARG-ANNOT	Bla|CTX-M-35|AB176534|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-35:AB176534:1-876:876
CARD	Bla|CTX-M-35|AB176534|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AB176534|0-876|ARO:3001897|CTX-M-35 [Klebsiella oxytoca]
Lahey	Bla|CTX-M-35|AB176534|1-876|876|betalactams|Class_A_betalactamases|CTX	BAD83773.1 AB176532.1:1-876
NCBI	Bla|CTX-M-35|AB176534|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|57157566|dbj|AB176532.1|1-876
Resfinder	Bla|CTX-M-35|AB176534|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-35_1_AB176534
ARG-ANNOT	gi|469473897|gb|JX679208.1|betalactams|Class_A_betalactamases|VEB	(Bla)VEB-8:JX679208:1-900:900
CARD	gi|469473897|gb|JX679208.1|betalactams|Class_A_betalactamases|VEB	@phgb|JX679208|0-900|ARO:3002377|VEB-8 [Escherichia coli]
Lahey	gi|469473897|gb|JX679208.1|betalactams|Class_A_betalactamases|VEB	AGH33739.1 JX679208.1:1-900
NCBI	gi|469473897|gb|JX679208.1|betalactams|Class_A_betalactamases|VEB	gi|756422059|gb|KP007363.1|23-922 gi|469473897|gb|JX679208.1|1-900
Resfinder	gi|469473897|gb|JX679208.1|betalactams|Class_A_betalactamases|VEB	blaVEB-8_1_JX679208
CARD	AGly|Y00459.1|gene3|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	@phgb|Y00459|2824-3748|ARO:3002657|APH(6)-Ia [Streptomyces griseus]
NCBI	AGly|Y00459.1|gene3|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH6	gi|1621271|emb|Y00459.1|2825-3748 gi|47075|emb|X05647.1|501-1424 gi|20385521|gb|AF372853.1|1-320
ARG-ANNOT	gi|329745042|gb|HQ425495.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-197:HQ425495:1-822:822
CARD	gi|329745042|gb|HQ425495.1|betalactams|Class_D_betalactamases|OXA	@phgb|HQ425495|0-822|ARO:3001482|OXA-197 [Acinetobacter nosocomialis]
Lahey	gi|329745042|gb|HQ425495.1|betalactams|Class_D_betalactamases|OXA	AEB98923.1 HQ425495.1:1-822
NCBI	gi|329745042|gb|HQ425495.1|betalactams|Class_D_betalactamases|OXA	gi|329745042|gb|HQ425495.1|1-822
Resfinder	gi|329745042|gb|HQ425495.1|betalactams|Class_D_betalactamases|OXA	blaOXA-197_1_HQ425495
NCBI	gi|595583473|gb|KF992025.1|betalactams|Class_C_betalactamases|CMY	gi|595583473|gb|KF992025.1|1027-2255
ARG-ANNOT	Bla|AY528518.1|gene1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-49:AY528718:414-1274:861
CARD	Bla|AY528518.1|gene1|betalactams|Class_A_betalactamases|SHV	@phgb|AY528718|413-1274|ARO:3001106|SHV-49 [Klebsiella pneumoniae]
Lahey	Bla|AY528518.1|gene1|betalactams|Class_A_betalactamases|SHV	AAS98184.1 AY528718.1:414-1274
NCBI	Bla|AY528518.1|gene1|betalactams|Class_A_betalactamases|SHV	gi|46452173|gb|AY528718.1|414-1274
Resfinder	Bla|AY528518.1|gene1|betalactams|Class_A_betalactamases|SHV	blaSHV-49_1_AY528718
NCBI	Mdr|AY661734.1|gene2|Multi-drug_resistance|Multi-drug_efflux_pumps|MEPA	gi|974161314|gb|CP012018.1|382662-384032 gi|974158397|gb|CP012015.1|382669-384039 gi|974155539|gb|CP012013.1|383711-385081 gi|974152716|gb|CP012012.1|382875-384245 gi|974149849|gb|CP012011.1|428706-430076 gi|941146344|gb|CP007676.1|353174-354544 gi|941142962|gb|CP007672.1|377090-378460 gi|941139768|gb|CP007657.1|377567-378937 gi|899756207|gb|CP012119.1|1538701-1537331 gi|899750970|gb|CP012120.1|560930-559560
ARG-ANNOT	Flq|QnrA7|GQ463707|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	(Flq)QnrA7:GQ463707:1-657:657
CARD	Flq|QnrA7|GQ463707|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	@phgb|GQ463707|0-657|ARO:3002713|QnrA7 [Shewanella algae]
NCBI	Flq|QnrA7|GQ463707|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	gi|288559209|gb|GQ463707.3|1-657
Resfinder	Flq|QnrA7|GQ463707|1-657|657|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRA	QnrA7_1_GQ463707
CARD	AGly|NC_009838.1.5616796|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	@phgb|NC_009838|97574-98477|ARO:3002540|AAC(3)-VIa [Escherichia coli APEC O1]
NCBI	AGly|NC_009838.1.5616796|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3	gi|909893998|gb|CP012168.1|145450-146352 gi|885007134|gb|CP012039.1|33298-32396 gi|778408320|gb|CP009413.2|35372-34470 gi|778407639|gb|CP009409.2|127702-128604 gi|381288746|gb|JN983049.1|17602-16700 gi|305670853|gb|HQ023863.1|111665-112567 gi|229561762|gb|FJ621588.1|117115-118017 gi|229561407|gb|FJ621586.1|92640-93542 gi|133905002|gb|CP000604.1|127059-127961 gi|99867038|gb|DQ517526.1|97575-98477
NCBI	Bla|EU408352.1|gene27|betalactams|Class_B_betalactamases|LRA	gi|169647641|gb|EU408352.1|37224-35395 gi|961560204|gb|CP013480.1|1897427-1897398 gi|734574563|gb|CP009974.1|5355598-5355627
NCBI	ACou|NC_012491.1.7719846|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|226092535|dbj|AP008955.1|3485211-3483241
CARD	CARD|phgb|BX664015|101314-101974|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|BX664015|101314-101974|ARO:3002670|cat [Serratia marcescens]
NCBI	CARD|phgb|BX664015|101314-101974|ARO:3002670|cat|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|825088700|gb|KP975077.1|46281-46941 gi|723228927|gb|CP009857.1|3882-4542 gi|723224425|gb|CP009852.1|33130-32470 gi|640855748|gb|CP007733.1|62932-62272 gi|150958513|gb|CP000650.1|66239-66899 gi|38259307|emb|BX664015.1|101315-101975
NCBI	Mdr|NC_007622.3794948|Multi-drug_resistance|MDR_regulator|ARLR	gi|82655308|emb|AJ938182.1|1389401-1388742
CARD	Flq|QnrB66_1_KC580655|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC580655|0-645|ARO:3002778|QnrB66 [Citrobacter freundii]
NCBI	Flq|QnrB66_1_KC580655|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|496297321|gb|KC580655.1|1-645
Resfinder	Flq|QnrB66_1_KC580655|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB66_1_KC580655
CARD	Phe|AM296480.1|gene1|Phenicol|Phenicol_efflux_pumps|FLOR	@phgb|AM296480|66-1281|ARO:3002705|floR [Bordetella bronchiseptica]
NCBI	Phe|AM296480.1|gene1|Phenicol|Phenicol_efflux_pumps|FLOR	gi|111548599|emb|AM296480.1|67-1281
Lahey	Bla|IMP-13_1_AJ512502|betalactams|Class_B_betalactamases|IMP	CAD55935.1 AJ512502.1:138-878
NCBI	Bla|IMP-13_1_AJ512502|betalactams|Class_B_betalactamases|IMP	gi|40644310|emb|AJ512502.1|138-878
Resfinder	Bla|IMP-13_1_AJ512502|betalactams|Class_B_betalactamases|IMP	blaIMP-13_1_AJ512502
Lahey	Bla|ADC-25_1_EF016355|betalactams|Class_C_betalactamases|ADC	ABK34773.1 EF016355.1:1-1152
NCBI	Bla|ADC-25_1_EF016355|betalactams|Class_C_betalactamases|ADC	gi|909010439|gb|JN247441.4|60067-58916 gi|117414816|gb|EF016355.1|1-1152 gi|158518999|gb|EF653401.1|1174-2325
Resfinder	Bla|ADC-25_1_EF016355|betalactams|Class_C_betalactamases|ADC	blaADC-25_1_EF016355
ARG-ANNOT	235|unknown_id|unknown_name|MLS|Macrolide_resistance_efflux_pumps|MEFB	(MLS)MefB:FJ196385:11084-12313:1230
NCBI	235|unknown_id|unknown_name|MLS|Macrolide_resistance_efflux_pumps|MEFB	gi|695225407|ref|NG_041272.1|11177-9948 gi|695213813|ref|NG_036690.1|12313-11084 gi|917657445|gb|KR827684.1|51267-50378 gi|214027202|gb|FJ196387.1|5790-5027 gi|695213807|ref|NG_036689.1|5281-4518 gi|928083869|gb|CP012682.1|68386-68645 gi|828971497|gb|CP011644.1|34363-34104 gi|754341646|gb|CP010575.1|18656-18397 gi|743008998|gb|CP010362.1|57374-57633 gi|665822573|gb|KJ484634.1|10402-10143
ARG-ANNOT	Phe|CatD|X15110|91-729|639|Phenicol|Chloramphenicol_acetyltransferases|CATP	(Phe)CatD:X15100:91-729:639
CARD	Phe|CatD|X15110|91-729|639|Phenicol|Chloramphenicol_acetyltransferases|CATP	@phgb|X15100|0-639|ARO:3002682|catD [Clostridium difficile]
NCBI	Phe|CatD|X15110|91-729|639|Phenicol|Chloramphenicol_acetyltransferases|CATP	gi|40432|emb|X15100.1|91-729
NCBI	gi|42357702|gb|AY513266.1|betalactams|Class_C_betalactamases|CMY	gi|42357702|gb|AY513266.1|165-1413
ARG-ANNOT	Bla|SHV-37|AF467948|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-37:AF467948:1-861:861
CARD	Bla|SHV-37|AF467948|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF467948|0-861|ARO:3001095|SHV-37 [Klebsiella pneumoniae]
Lahey	Bla|SHV-37|AF467948|1-861|861|betalactams|Class_A_betalactamases|SHV	AAL82593.1 AF467948.1:1-861
NCBI	Bla|SHV-37|AF467948|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|18958445|gb|AF467948.1|1-861
Resfinder	Bla|SHV-37|AF467948|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-37_1_AF467948
ARG-ANNOT	1148|EU427302.2|EU427302|betalactams|Class_C_betalactamases|MIR	(Bla)ACT-3:EU427302:1476-2618:1143
CARD	1148|EU427302.2|EU427302|betalactams|Class_C_betalactamases|MIR	@phgb|EU427302|1475-2618|ARO:3001829|ACT-4 [Enterobacter asburiae]
Lahey	1148|EU427302.2|EU427302|betalactams|Class_C_betalactamases|MIR	ABZ81086.1 EU427302.2:1476-2618
NCBI	1148|EU427302.2|EU427302|betalactams|Class_C_betalactamases|MIR	gi|975830243|gb|CP011863.1|3127428-3128570 gi|306950620|gb|EU427302.2|1476-2618 gi|17432185|emb|AJ311172.1|12-1151
NCBI	Bla|OXA-58_14_EU107364|betalactams|Class_D_betalactamases|OXA	gi|156938936|gb|EU107364.1|1-843
Resfinder	Bla|OXA-58_14_EU107364|betalactams|Class_D_betalactamases|OXA	blaOXA-58_14_EU107364
ARG-ANNOT	Bla|OXA-17|DQ902344|2717-3517|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-17:DQ902344:2717-3517:801
Lahey	Bla|OXA-17|DQ902344|2717-3517|801|betalactams|Class_D_betalactamases|OXA	ABI63579.1 DQ902344.1:2717-3517
NCBI	Bla|OXA-17|DQ902344|2717-3517|801|betalactams|Class_D_betalactamases|OXA	gi|238865601|gb|GQ139471.1|1935-2735 gi|695212024|ref|NG_036316.1|2717-3517 gi|88911232|gb|DQ393782.1|1635-2435
Resfinder	Bla|OXA-17|DQ902344|2717-3517|801|betalactams|Class_D_betalactamases|OXA	blaOXA-17_2_DQ902344
ARG-ANNOT	Bla|TEM-110|AY130283|1-785|785|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-110:AY130283:1-785:785
NCBI	Bla|TEM-110|AY130283|1-785|785|betalactams|Class_A_betalactamases|TEM	gi|695221008|ref|NG_039599.1|9547-10331 gi|18482487|gb|AY072920.1|37-821 gi|28192515|gb|AY130283.1|1-785
ARG-ANNOT	Bla|OXA-136|EU086830|89-898|810|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-136:EU086830:89-898:810
CARD	Bla|OXA-136|EU086830|89-898|810|betalactams|Class_D_betalactamases|OXA	@phgb|EU086830|88-898|ARO:3001765|OXA-136 [Brachyspira pilosicoli]
Lahey	Bla|OXA-136|EU086830|89-898|810|betalactams|Class_D_betalactamases|OXA	ABW76134.1 EU086830.1:89-898
NCBI	Bla|OXA-136|EU086830|89-898|810|betalactams|Class_D_betalactamases|OXA	gi|300687338|gb|CP002025.1|1473109-1472300 gi|158634575|gb|EU086830.1|89-898
Resfinder	Bla|OXA-136|EU086830|89-898|810|betalactams|Class_D_betalactamases|OXA	blaOXA-136_2_EU086832
NCBI	Rif|NC_009725.1.5459527|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|556017688|gb|CP006845.1|122856-126446 gi|154350369|gb|CP000560.1|122626-126216
CARD	CARD|phgb|KT818596|10010-10865|ARO:3003713|VCC-1|betalactams|Class_A_betalactamases|VCC	@phgb|KT818596|10010-10865|ARO:3003713|VCC-1 [Vibrio cholerae]
NCBI	CARD|phgb|KT818596|10010-10865|ARO:3003713|VCC-1|betalactams|Class_A_betalactamases|VCC	gi|970597781|gb|KT818596.1|6343-7197 gi|970597781|gb|KT818596.1|10011-10865
Resfinder	CARD|phgb|KT818596|10010-10865|ARO:3003713|VCC-1|betalactams|Class_A_betalactamases|VCC	blaVCC-1_1_KT818596
CARD	gi|757399521|gb|KP050493.1|betalactams|Class_A_betalactamases|CTX	@phgb|KP050493|0-876|ARO:3003167|CTX-M-159 [Proteus mirabilis]
Lahey	gi|757399521|gb|KP050493.1|betalactams|Class_A_betalactamases|CTX	AJO16046.1 KP050493.1:1-876
NCBI	gi|757399521|gb|KP050493.1|betalactams|Class_A_betalactamases|CTX	gi|757399521|gb|KP050493.1|1-876
ARG-ANNOT	717|GQ288397.1|GQ288397|betalactams|Class_B_betalactamases|IMP	(Bla)SIM-1:GQ288397:1-741:741
CARD	717|GQ288397.1|GQ288397|betalactams|Class_B_betalactamases|IMP	@phgb|GQ288397|0-741|ARO:3000846|SIM-1 beta-lactamase [Acinetobacter bereziniae]
NCBI	717|GQ288397.1|GQ288397|betalactams|Class_B_betalactamases|IMP	gi|695225689|ref|NG_041393.1|1041-1781 gi|254547273|gb|GQ288397.1|1-741 gi|187940251|gb|EU686387.1|99-839 gi|119350571|gb|EF125010.1|534-1274 gi|62199047|gb|AY887066.1|494-1234
Resfinder	717|GQ288397.1|GQ288397|betalactams|Class_B_betalactamases|IMP	blaSIM-1_1_JF731030
NCBI	Bla|SHV-5_3_GQ407139|betalactams|Class_A_betalactamases|SHV	gi|257043795|gb|GQ407139.1|1-861
Resfinder	Bla|SHV-5_3_GQ407139|betalactams|Class_A_betalactamases|SHV	blaSHV-5_3_GQ407139
ARG-ANNOT	Bla|OKP-B-12|AJ635420|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-12:AJ635420:1-861:861
CARD	Bla|OKP-B-12|AJ635420|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AJ635420|0-789|ARO:3002445|OKP-B-12 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-12|AJ635420|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|46309215|emb|AJ635420.1|1-789
Resfinder	Bla|OKP-B-12|AJ635420|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-12_1_AJ635420
CARD	gi|757399515|gb|KP050490.1|betalactams|Class_C_betalactamases|DHA	@phgb|KP050490|0-1140|ARO:3002141|DHA-10 [Morganella morganii]
Lahey	gi|757399515|gb|KP050490.1|betalactams|Class_C_betalactamases|DHA	AJO16043.1 KP050490.1:1-1140
NCBI	gi|757399515|gb|KP050490.1|betalactams|Class_C_betalactamases|DHA	gi|757399515|gb|KP050490.1|1-1140
ARG-ANNOT	Bla|OXY2-10|FJ785626|132-1004|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-10:FJ785626:132-1004:873
CARD	Bla|OXY2-10|FJ785626|132-1004|873|betalactams|Class_A_betalactamases|OXY	@phgb|FJ785626|131-1004|ARO:3002405|OXY-2-10 [Klebsiella oxytoca]
NCBI	Bla|OXY2-10|FJ785626|132-1004|873|betalactams|Class_A_betalactamases|OXY	gi|257136311|gb|FJ785626.1|132-1004
Resfinder	Bla|OXY2-10|FJ785626|132-1004|873|betalactams|Class_A_betalactamases|OXY	blaOXY-2-10_10_FJ785626
NCBI	ACou|NC_010410.6000336|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|939559781|gb|CP012952.1|221456-223339 gi|787858845|gb|CP008706.1|138348-140231 gi|751410783|gb|CP010781.1|3788310-3786427 gi|213985689|gb|CP001172.1|138457-140340 gi|213054530|gb|CP001182.1|3929708-3927825 gi|169147133|emb|CU459141.1|138431-140314
CARD	CARD|phgb|S82452|120-978|ARO:3001068|SHV-9|betalactams|Class_A_betalactamases|SHV	@phgb|S82452|120-978|ARO:3001068|SHV-9 [Klebsiella pneumoniae]
NCBI	CARD|phgb|S82452|120-978|ARO:3001068|SHV-9|betalactams|Class_A_betalactamases|SHV	gi|695197752|ref|NG_034800.1|121-979
CARD	Mdr|NC_010410.6000771|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEAI	@phgb|NC_011586|3278907-3280158|ARO:3000780|adeI [Acinetobacter baumannii AB0057]
NCBI	Mdr|NC_010410.6000771|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEAI	gi|939559781|gb|CP012952.1|868047-866797 gi|787858845|gb|CP008706.1|825330-824080 gi|751410783|gb|CP010781.1|3147669-3148919 gi|213985689|gb|CP001172.1|769685-768435 gi|213054530|gb|CP001182.1|3278908-3280158 gi|169147133|emb|CU459141.1|770958-769708 gi|88758799|emb|CT025787.2|1-1251
NCBI	Rif|NC_002953.2862188|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|49243355|emb|BX571857.1|568813-572364 gi|47118312|dbj|BA000033.2|570182-573733
ARG-ANNOT	Bla|TEM-141|AY956335|39-889|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-141:AY956335:39-899:861
CARD	Bla|TEM-141|AY956335|39-889|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY956335|38-899|ARO:3001004|TEM-141 [Enterobacter cloacae]
Lahey	Bla|TEM-141|AY956335|39-889|861|betalactams|Class_A_betalactamases|TEM	AAX56615.1 AY956335.1:39-899
NCBI	Bla|TEM-141|AY956335|39-889|861|betalactams|Class_A_betalactamases|TEM	gi|695211426|ref|NG_036075.1|39-899
Resfinder	Bla|TEM-141|AY956335|39-889|861|betalactams|Class_A_betalactamases|TEM	blaTEM-141_1_AY956335
NCBI	AGly|aph3-dprime-Ic_1_DQ336355|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|84993815|gb|DQ336355.1|410-1225
ARG-ANNOT	gi|56311399|emb|AJ866988.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-130:AJ866988:1-861:861
CARD	gi|56311399|emb|AJ866988.1|betalactams|Class_A_betalactamases|TEM	@phgb|AJ866988|0-861|ARO:3000994|TEM-130 [Klebsiella pneumoniae]
Lahey	gi|56311399|emb|AJ866988.1|betalactams|Class_A_betalactamases|TEM	CAI29263.1 AJ866988.1:1-861
NCBI	gi|56311399|emb|AJ866988.1|betalactams|Class_A_betalactamases|TEM	gi|56311399|emb|AJ866988.1|1-861
Resfinder	gi|56311399|emb|AJ866988.1|betalactams|Class_A_betalactamases|TEM	blaTEM-130_1_AJ866988
CARD	gi|171188393|gb|EU541448.1|betalactams|Class_B_betalactamases|IMP	@phgb|EU541448|0-741|ARO:3002216|IMP-25 [Pseudomonas aeruginosa]
Lahey	gi|171188393|gb|EU541448.1|betalactams|Class_B_betalactamases|IMP	ACB41775.1 EU541448.1:1-741
NCBI	gi|171188393|gb|EU541448.1|betalactams|Class_B_betalactamases|IMP	gi|171188393|gb|EU541448.1|1-741
ARG-ANNOT	476|GQ260093.1|GQ260093|betalactams|Class_A_betalactamases|BIC	(Bla)BIC-1:GQ260093:1-885:885
NCBI	476|GQ260093.1|GQ260093|betalactams|Class_A_betalactamases|BIC	gi|283979148|gb|GQ260093.1|1-885
Resfinder	476|GQ260093.1|GQ260093|betalactams|Class_A_betalactamases|BIC	blaBIC-1_1_GQ260093
CARD	Gly|JF802084.2|gene3|Glycopeptides|VanN-type_resistance_protein|VANTN	@phgb|JF802084|2161-4264|ARO:3002975|vanTN [Enterococcus faecium]
NCBI	Gly|JF802084.2|gene3|Glycopeptides|VanN-type_resistance_protein|VANTN	gi|507722025|gb|JF802084.2|2162-4264 gi|425702999|dbj|AB701345.1|5011-7113
ARG-ANNOT	Flq|QnrB13|EU273756|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB13:EU273756:37-681:645
NCBI	Flq|QnrB13|EU273756|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|161579479|gb|EU273756.1|1-681
Resfinder	Flq|QnrB13|EU273756|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB13_2_EU273756
ARG-ANNOT	Bla|CTX-M-63|AB205197|4-876|873|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-63:AB205197:4-876:873
CARD	Bla|CTX-M-63|AB205197|4-876|873|betalactams|Class_A_betalactamases|CTX	@phgb|AB205197|3-876|ARO:3001924|CTX-M-63 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-63|AB205197|4-876|873|betalactams|Class_A_betalactamases|CTX	BAD90119.1 AB205197.1:4-876
NCBI	Bla|CTX-M-63|AB205197|4-876|873|betalactams|Class_A_betalactamases|CTX	gi|189304726|gb|EU660216.1|49-921 gi|60359799|dbj|AB205197.1|4-876
Resfinder	Bla|CTX-M-63|AB205197|4-876|873|betalactams|Class_A_betalactamases|CTX	blaCTX-M-63_1_EU660216
CARD	CARD|phgb|AY139601|110-404|ARO:3002864|dfrB1|Trimethoprim|Dihydrofolate_reductase|DFRB	@phgb|AY139601|110-404|ARO:3002864|dfrB1 [uncultured bacterium]
NCBI	CARD|phgb|AY139601|110-404|ARO:3002864|dfrB1|Trimethoprim|Dihydrofolate_reductase|DFRB	gi|768032361|gb|KM975294.1|2132-2426 gi|490256275|gb|KC527015.1|1553-1847 gi|389656440|gb|JN676230.2|3086-3380 gi|381352240|gb|JQ041634.1|709-1003 gi|328496507|gb|HQ317920.1|86-380 gi|260513014|gb|GQ900749.1|699-993 gi|695214489|ref|NG_036812.1|2352-2646 gi|215262447|emb|FM877485.1|111-405 gi|24209732|gb|AY139601.1|111-405 gi|695211643|ref|NG_036098.1|1637-1931
CARD	gi|291501731|gb|GU827715.1|betalactams|Class_A_betalactamases|SHV	@phgb|GU827715|0-861|ARO:3001176|SHV-129 [Escherichia coli]
Lahey	gi|291501731|gb|GU827715.1|betalactams|Class_A_betalactamases|SHV	ADE08533.1 GU827715.1:1-861
NCBI	gi|291501731|gb|GU827715.1|betalactams|Class_A_betalactamases|SHV	gi|695223942|ref|NG_040961.1|1-861
Resfinder	gi|291501731|gb|GU827715.1|betalactams|Class_A_betalactamases|SHV	blaSHV-129_1_GU827715
ARG-ANNOT	Bla|OXA-31|AF294653|754-1581|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-31:AF294653:754-1581:828
CARD	Bla|OXA-31|AF294653|754-1581|828|betalactams|Class_D_betalactamases|OXA	@phgb|AF294653|753-1584|ARO:3001425|OXA-31 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-31|AF294653|754-1581|828|betalactams|Class_D_betalactamases|OXA	AAK52604.1 AF294653.1:754-1584
NCBI	Bla|OXA-31|AF294653|754-1581|828|betalactams|Class_D_betalactamases|OXA	gi|118132662|gb|EF067840.1|133-963 gi|695207935|ref|NG_035452.1|754-1584 gi|300391780|gb|HM175874.1|55-174 gi|695211314|ref|NG_036058.1|452-571 gi|9454102|gb|AF227505.1|168-287
Resfinder	Bla|OXA-31|AF294653|754-1581|828|betalactams|Class_D_betalactamases|OXA	blaOXA-31_1_AF294653
CARD	CARD|phgb|U56415|279-1719|ARO:3002884|iri|Rifampin|Monooxygenase|IRI	@phgb|U56415|279-1719|ARO:3002884|iri [Rhodococcus equi]
NCBI	CARD|phgb|U56415|279-1719|ARO:3002884|iri|Rifampin|Monooxygenase|IRI	gi|1785984|gb|U56415.1|REU56415|280-1720
NCBI	Bla|M63556.1|gene1|betalactams|Class_B_betalactamases|CFIA	gi|143933|gb|M34831.1|BNRCFIA|460-1282 gi|143931|gb|M63556.1|BNRCCRA|18-840
CARD	CARD|phgb|EF210159|0-876|ARO:3001919|CTX-M-58|betalactams|Class_A_betalactamases|CTX	@phgb|EF210159|0-876|ARO:3001919|CTX-M-58 [Escherichia coli]
NCBI	CARD|phgb|EF210159|0-876|ARO:3001919|CTX-M-58|betalactams|Class_A_betalactamases|CTX	gi|124263631|gb|EF210159.1|1-877
NCBI	gi|751813257|gb|KM979377.1|betalactams|Class_D_betalactamases|OXA	gi|751813257|gb|KM979377.1|1-872
NCBI	gi|751813263|gb|KM979380.1|betalactams|Class_D_betalactamases|OXA	gi|751813263|gb|KM979380.1|1-885
ARG-ANNOT	gi|322719693|gb|HQ734811.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-200:HQ734811:1-825:825
CARD	gi|322719693|gb|HQ734811.1|betalactams|Class_D_betalactamases|OXA	@phgb|HQ734811|0-825|ARO:3001665|OXA-200 [Acinetobacter baumannii]
Lahey	gi|322719693|gb|HQ734811.1|betalactams|Class_D_betalactamases|OXA	ADX07745.1 HQ734811.1:1-825
NCBI	gi|322719693|gb|HQ734811.1|betalactams|Class_D_betalactamases|OXA	gi|322719693|gb|HQ734811.1|1-825
Resfinder	gi|322719693|gb|HQ734811.1|betalactams|Class_D_betalactamases|OXA	blaOXA-200_1_HQ734811
ARG-ANNOT	gi|77158012|gb|DQ211987.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-51:DQ211987:1-876:876
CARD	gi|77158012|gb|DQ211987.1|betalactams|Class_A_betalactamases|CTX	@phgb|DQ211987|0-876|ARO:3001913|CTX-M-51 [Escherichia coli]
Lahey	gi|77158012|gb|DQ211987.1|betalactams|Class_A_betalactamases|CTX	ABA62022.1 DQ211987.1:1-876
NCBI	gi|77158012|gb|DQ211987.1|betalactams|Class_A_betalactamases|CTX	gi|77158012|gb|DQ211987.1|1-876
Resfinder	gi|77158012|gb|DQ211987.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-51_1_DQ211987
NCBI	gi|67462182|gb|AY750914.2|betalactams|Class_A_betalactamases|CTX	gi|67462182|gb|AY750914.2|1-1079
Lahey	Bla|KJ135342.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30283.1 KJ135342.1:873-49
NCBI	Bla|KJ135342.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389163|gb|KJ135342.1|873-49
ARG-ANNOT	Bla|SHV-53|AY590467|1-729|729|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-53:AY590467:1-729:729
CARD	Bla|SHV-53|AY590467|1-729|729|betalactams|Class_A_betalactamases|SHV	@phgb|AY590467|0-729|ARO:3001110|SHV-53 [Klebsiella pneumoniae]
NCBI	Bla|SHV-53|AY590467|1-729|729|betalactams|Class_A_betalactamases|SHV	gi|46562013|gb|AY590467.1|1-729
ARG-ANNOT	632|HQ634775.2|HQ634775|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-198:HQ634775:3013-3801:779
CARD	632|HQ634775.2|HQ634775|betalactams|Class_D_betalactamases|OXA	@phgb|HQ634775|3012-3801|ARO:3001805|OXA-198 [Pseudomonas aeruginosa]
Lahey	632|HQ634775.2|HQ634775|betalactams|Class_D_betalactamases|OXA	ADT70779.1 HQ634775.2:3013-3801
NCBI	632|HQ634775.2|HQ634775|betalactams|Class_D_betalactamases|OXA	gi|335335057|gb|HQ634775.2|3013-3801
Resfinder	632|HQ634775.2|HQ634775|betalactams|Class_D_betalactamases|OXA	blaOXA-198_1_HQ634775
NCBI	Sul|sul1_30_JF262178|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|325301795|gb|JF262178.1|326-1165
Resfinder	Sul|sul1_30_JF262178|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_30_JF262178
NCBI	Bla|SHV-11_12_GU211012|betalactams|Class_A_betalactamases|SHV	gi|695223691|ref|NG_040871.1|1-861
Resfinder	Bla|SHV-11_12_GU211012|betalactams|Class_A_betalactamases|SHV	blaSHV-11_12_GU211012
NCBI	ACou|NC_002516.2.879897|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|926451317|emb|LN871187.1|5589979-5588090 gi|553895034|gb|CP006832.1|5577912-5576023 gi|553886202|gb|CP006831.1|5578997-5577108 gi|543879514|gb|CP006705.1|5357498-5355609 gi|110227054|gb|AE004091.2|5577917-5576028
ARG-ANNOT	Bla|VIM-2|AY884050|551-1351|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-2:AY884050:551-1351:801
CARD	Bla|VIM-2|AY884050|551-1351|801|betalactams|Class_B_betalactamases|VIM	@phgb|EF614235|2948-3749|ARO:3002272|VIM-2 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-2|AY884050|551-1351|801|betalactams|Class_B_betalactamases|VIM	AAF61483.1 AF191564.1:1316-2116
NCBI	Bla|VIM-2|AY884050|551-1351|801|betalactams|Class_B_betalactamases|VIM	gi|974141864|gb|KT362173.1|2125-2925 gi|974137695|dbj|LC107606.1|1821-2621 gi|968588390|gb|KT716347.1|1878-2678 gi|970567976|dbj|LC107425.1|79-879 gi|961377543|gb|KT326691.1|1181-1981 gi|957761200|gb|KT768111.1|977-1777 gi|751155284|gb|KJ620482.1|1296-2096 gi|751155277|gb|KJ620481.1|837-1637 gi|927928838|gb|KP754012.1|1117-1917 gi|927928831|gb|KP754011.1|598-1398
Resfinder	Bla|VIM-2|AY884050|551-1351|801|betalactams|Class_B_betalactamases|VIM	blaVIM-2_1_AF302086
ARG-ANNOT	Bla|IMP-13|JN091097|261-1001|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-13:JN091097:261-1001:741
CARD	Bla|IMP-13|JN091097|261-1001|741|betalactams|Class_B_betalactamases|IMP	@phgb|AJ550807|2242-2983|ARO:3002204|IMP-13 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-13|JN091097|261-1001|741|betalactams|Class_B_betalactamases|IMP	CAD80251.1 AJ550807.1:2243-2983
NCBI	Bla|IMP-13|JN091097|261-1001|741|betalactams|Class_B_betalactamases|IMP	gi|401668650|gb|JX131371.1|724-1464 gi|354549225|gb|JN091097.1|261-1001 gi|281021955|gb|GU207399.1|66-806 gi|219664352|gb|FJ172676.1|869-1609 gi|219664342|gb|FJ172674.1|168-908 gi|164663647|emb|AM931299.1|32-772 gi|72416444|emb|AJ628135.2|2228-2968 gi|33086392|emb|AJ550807.1|2243-2983
ARG-ANNOT	Bla|OKP-A-12|AM950916|19-879|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-12:AM950916:19-879:861
CARD	Bla|OKP-A-12|AM950916|19-879|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM850916|18-879|ARO:3002429|OKP-A-12 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-12|AM950916|19-879|861|betalactams|Class_A_betalactamases|OKP	gi|197724704|emb|AM850916.2|19-879
Resfinder	Bla|OKP-A-12|AM950916|19-879|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-12_1_AM850915
ARG-ANNOT	gi|323709062|gb|HQ398215.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-102:HQ398215:245-1120:876
CARD	gi|323709062|gb|HQ398215.1|betalactams|Class_A_betalactamases|CTX	@phgb|HQ398215|244-1120|ARO:3001961|CTX-M-102 [Escherichia coli]
Lahey	gi|323709062|gb|HQ398215.1|betalactams|Class_A_betalactamases|CTX	ADY02546.1 HQ398215.1:245-1120
NCBI	gi|323709062|gb|HQ398215.1|betalactams|Class_A_betalactamases|CTX	gi|323709062|gb|HQ398215.1|245-1120
Resfinder	gi|323709062|gb|HQ398215.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-102_1_HQ398215
ARG-ANNOT	Bla|GOB-7|AF189297|1-756|756|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-7:AF189297:1-756:756
NCBI	Bla|GOB-7|AF189297|1-756|756|betalactams|Class_B_betalactamases|GOB	gi|9587053|gb|AF189297.1|AF189297|1-756
Resfinder	Bla|GOB-7|AF189297|1-756|756|betalactams|Class_B_betalactamases|GOB	blaGOB-7_1_AF189297
CARD	Mdr|NC_002516.2.880362|Multi-drug_resistance|MDR_regulator|tetR|RequiresSNPConfirmation	@phgb|NC_002516|4166517-4167159|ARO:3000818|nalC [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.880362|Multi-drug_resistance|MDR_regulator|tetR|RequiresSNPConfirmation	gi|974347073|gb|CP008869.1|4712418-4713059 gi|974282928|gb|CP008861.1|2328120-2328761 gi|926451317|emb|LN871187.1|1349319-1348678 gi|675286744|emb|HG974234.1|4270632-4271273 gi|553895034|gb|CP006832.1|4166513-4167154 gi|553886202|gb|CP006831.1|4166513-4167154 gi|543879514|gb|CP006705.1|3946101-3946742 gi|110227054|gb|AE004091.2|4166518-4167159 gi|49078955|gb|AY657563.1|1-639
ARG-ANNOT	Bla|OXA-160|GU199038|1196-2023|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-160:GU199038:1196-2023:828
CARD	Bla|OXA-160|GU199038|1196-2023|828|betalactams|Class_D_betalactamases|OXA	@phgb|GU199038|1195-2023|ARO:3001663|OXA-160 [Acinetobacter baumannii]
Lahey	Bla|OXA-160|GU199038|1196-2023|828|betalactams|Class_D_betalactamases|OXA	ADB28891.1 GU199038.2:1196-2023
NCBI	Bla|OXA-160|GU199038|1196-2023|828|betalactams|Class_D_betalactamases|OXA	gi|307128751|gb|GU199038.2|1196-2023 gi|908777896|gb|KT022421.1|33-1
Resfinder	Bla|OXA-160|GU199038|1196-2023|828|betalactams|Class_D_betalactamases|OXA	blaOXA-160_1_GU199038
ARG-ANNOT	Bla|CTX-M-62|GU125669|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-62:GU125669:1-876:876
NCBI	Bla|CTX-M-62|GU125669|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|281335925|gb|GU125669.1|1-876
NCBI	Phe|AY123253|gene|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|985700753|dbj|LC122351.1|1660-2319 gi|973776294|gb|KT833851.1|162668-163327 gi|973743057|gb|KT894021.1|4118-3459 gi|974004808|dbj|LC030201.1|1375-2034 gi|974004804|dbj|LC030200.1|1375-2034 gi|971497742|gb|CP012903.1|56776-57435 gi|970697631|gb|KT935446.1|80637-81296 gi|937637950|gb|KT203286.1|5899-5240 gi|941350020|gb|KT163018.1|10762-10103 gi|941350015|gb|KT163017.1|4070-3411
NCBI	1388|HQ399624.1|HQ399624|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|327195628|gb|HQ399624.1|1-675
Resfinder	1388|HQ399624.1|HQ399624|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tetA(P)_2_HQ399624
ARG-ANNOT	Bla|OXA-120|HE963768|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-120:HE963768:1-825:825
CARD	Bla|OXA-120|HE963768|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HE963768|0-825|ARO:3001672|OXA-120 [Acinetobacter baumannii]
Lahey	Bla|OXA-120|HE963768|1-825|825|betalactams|Class_D_betalactamases|OXA	CCJ32595.1 HE963768.1:1-825
NCBI	Bla|OXA-120|HE963768|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|160623383|gb|EU255289.1|1-825
Resfinder	Bla|OXA-120|HE963768|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-120_1_HE963768
CARD	CARD|pvgb|NC_003197|3343961-3345854|ARO:3003317|Salmonella|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|parE|RequiresSNPConfirmation	@pvgb|NC_003197|3343961-3345854|ARO:3003317|Salmonella serovars parE conferring resistance to fluoroquinolones [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	CARD|pvgb|NC_003197|3343961-3345854|ARO:3003317|Salmonella|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|parE|RequiresSNPConfirmation	gi|981191958|emb|LN999997.1|2060000-2058107 gi|973795115|gb|AE006468.2|3343969-3345862 gi|821161554|gb|CP011428.1|3372195-3374088 gi|808186398|gb|CP007523.1|4028200-4030093 gi|777181114|emb|LN829402.1|673498-671605 gi|764057510|gb|CP007235.1|4115648-4117541 gi|764048557|gb|CP007216.1|3967860-3969753 gi|674281104|gb|CP009102.1|3279864-3281757 gi|669110799|gb|CP007804.2|3255505-3257398 gi|661245796|dbj|AP014565.1|3475930-3477823
CARD	742|JX560992.1|JX560992|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	@phgb|JX560992|11387-12872|ARO:3003206|lsaE [Staphylococcus aureus];@phgb|JQ861959|6672-8157|ARO:3003206|lsaE [Staphylococcus aureus]
NCBI	742|JX560992.1|JX560992|MLS|Streptogramin_resistance_ATP-binding_cassette_ABC_efflux_pumps|LSA	gi|927820524|gb|KT448822.1|3818-2334 gi|927820498|gb|KT448821.1|15299-13815 gi|927820473|gb|KT448820.1|15300-13816 gi|927820447|gb|KT448819.1|15301-13817 gi|927820421|gb|KT448818.1|15301-13817 gi|927820398|gb|KT448817.1|15299-13815 gi|908777994|gb|KR936172.1|15299-13815 gi|770542082|gb|KP339868.1|6785-8269 gi|749389159|gb|KJ645709.1|36375-37859 gi|576639548|gb|KF772204.1|5884-7368
CARD	MLS|ermX_2_X51472|MLS|23S_rRNA_methyltransferases|ERMX	@phgb|X51472|194-956|ARO:3000596|ErmX [Corynebacterium diphtheriae]
NCBI	MLS|ermX_2_X51472|MLS|23S_rRNA_methyltransferases|ERMX	gi|15778307|gb|AF411029.1|1556-2317 gi|45563|emb|X57320.1|295-1056 gi|695196158|ref|NG_034337.1|195-956
Resfinder	MLS|ermX_2_X51472|MLS|23S_rRNA_methyltransferases|ERMX	erm(X)_2_X51472
ARG-ANNOT	AGly|Aac6-Ib|M21682|380-985|606|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Ib:M21682:380-985:606
CARD	AGly|Aac6-Ib|M21682|380-985|606|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|EU259884|827-1433|ARO:3002546|AAC(6')-Ib [Proteus mirabilis]
NCBI	AGly|Aac6-Ib|M21682|380-985|606|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|974319461|gb|CP008865.1|2545981-2545376 gi|971339514|gb|CP006662.2|83347-82742 gi|943457735|gb|KT818627.1|74907-74302 gi|943457735|gb|KT818627.1|136498-135893 gi|902625474|gb|CP011993.1|2738-2133 gi|902625122|gb|CP011990.1|137063-137668 gi|902618983|gb|CP011988.1|3593-2988 gi|902618894|gb|CP011987.1|7333-6728 gi|800908878|gb|KP345882.1|47565-48170 gi|760459974|gb|KJ958927.1|14351-13746 gi|760459883|gb|KJ958926.1|9263-8658
Resfinder	AGly|Aac6-Ib|M21682|380-985|606|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Ib_1_M21682
ARG-ANNOT	gi|209892783|gb|FJ234412.1|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-8:FJ234412:1-882:882
CARD	gi|209892783|gb|FJ234412.1|betalactams|Class_A_betalactamases|KPC	@phgb|FJ234412|0-882|ARO:3002318|KPC-8 [Klebsiella pneumoniae]
Lahey	gi|209892783|gb|FJ234412.1|betalactams|Class_A_betalactamases|KPC	ACI95258.1 FJ234412.1:1-882
NCBI	gi|209892783|gb|FJ234412.1|betalactams|Class_A_betalactamases|KPC	gi|209892783|gb|FJ234412.1|1-882
Resfinder	gi|209892783|gb|FJ234412.1|betalactams|Class_A_betalactamases|KPC	blaKPC-8_1_FJ234412
CARD	CARD|phgb|NC_007907.1|4200836-4202015|ARO:3003726|vanSI|Glycopeptides|VanI-type_regulator|VANSI	@phgb|NC_007907.1|4200836-4202015|ARO:3003726|vanSI [Desulfitobacterium hafniense]
NCBI	CARD|phgb|NC_007907.1|4200836-4202015|ARO:3003726|vanSI|Glycopeptides|VanI-type_regulator|VANSI	gi|698315210|emb|LK996017.1|4141947-4143125 gi|89332194|dbj|AP008230.1|4200837-4202015
ARG-ANNOT	Bla|IMP-21|AB204557|1-738|738|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-21:AB204557:1-738:738
CARD	Bla|IMP-21|AB204557|1-738|738|betalactams|Class_B_betalactamases|IMP	@phgb|AB204557|0-738|ARO:3002212|IMP-21 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-21|AB204557|1-738|738|betalactams|Class_B_betalactamases|IMP	BAD89802.1 AB204557.1:1-738
NCBI	Bla|IMP-21|AB204557|1-738|738|betalactams|Class_B_betalactamases|IMP	gi|59891390|dbj|AB204557.1|1-738
NCBI	Bla|mecA_10_AB512767|betalactams|Penicillin_binding_protein|MECA	gi|961572904|gb|CP013619.1|47565-49574 gi|961570270|gb|CP013616.1|47558-49567 gi|959165045|gb|CP009828.1|47917-49926 gi|937305921|gb|CP012756.1|1393480-1395489 gi|928189965|dbj|AP014944.1|52490-54499 gi|841330217|emb|LN866849.1|427183-429192 gi|807232188|gb|CP011116.1|35985-33976 gi|760495145|gb|CP010944.1|2706000-2703991 gi|760491253|gb|CP010943.1|2710136-2708127 gi|760463627|gb|CP010940.1|2728511-2726502
Resfinder	Bla|mecA_10_AB512767|betalactams|Penicillin_binding_protein|MECA	mecA_10_AB512767
ARG-ANNOT	Bla|GES-16|HM173356|512-1375|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-16:HM173356:512-1375:864
CARD	Bla|GES-16|HM173356|512-1375|864|betalactams|Class_A_betalactamases|GES	@phgb|HM173356|511-1375|ARO:3002345|GES-16 [Serratia marcescens]
Lahey	Bla|GES-16|HM173356|512-1375|864|betalactams|Class_A_betalactamases|GES	ADJ94120.1 HM173356.1:512-1375
NCBI	Bla|GES-16|HM173356|512-1375|864|betalactams|Class_A_betalactamases|GES	gi|300245053|gb|HM173356.1|512-1375
Resfinder	Bla|GES-16|HM173356|512-1375|864|betalactams|Class_A_betalactamases|GES	blaGES-16_1_HM173356
CARD	gi|768677225|gb|KP128034.1|betalactams|Class_A_betalactamases|CTX	@phgb|KP128034|0-876|ARO:3003168|CTX-M-160 [Escherichia coli]
Lahey	gi|768677225|gb|KP128034.1|betalactams|Class_A_betalactamases|CTX	AJU57235.1 KP128034.1:1-876
NCBI	gi|768677225|gb|KP128034.1|betalactams|Class_A_betalactamases|CTX	gi|768677225|gb|KP128034.1|1-876
ARG-ANNOT	Bla|IMP-9|HM106459|3-740|738|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-9:HM106459:3-740:738
CARD	Bla|IMP-9|HM106459|3-740|738|betalactams|Class_B_betalactamases|IMP	@phgb|AY033653|2787-3525|ARO:3002200|IMP-9 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-9|HM106459|3-740|738|betalactams|Class_B_betalactamases|IMP	AGL46523.1 KC543497.1:457877-457140
NCBI	Bla|IMP-9|HM106459|3-740|738|betalactams|Class_B_betalactamases|IMP	gi|496684371|gb|KC543497.1|457877-457140 gi|426206797|emb|FN178517.2|98-835 gi|339831949|gb|JN107561.1|1-738 gi|297615936|gb|HM106459.1|3-740 gi|294622882|gb|GU906255.1|3-740 gi|266706179|gb|GU122165.1|141-878 gi|544586546|gb|KF184386.1|1-626 gi|523928501|gb|KF255596.1|1-625 gi|523928497|gb|KF255594.1|1-624 gi|523928493|gb|KF255592.1|1-623
Resfinder	Bla|IMP-9|HM106459|3-740|738|betalactams|Class_B_betalactamases|IMP	blaIMP-9_1_AY033653
CARD	Bla|CMY-99_1_KF305673|betalactams|Class_C_betalactamases|CMY	@phgb|KF305673|17-1163|ARO:3002070|CMY-99 [Proteus mirabilis]
Lahey	Bla|CMY-99_1_KF305673|betalactams|Class_C_betalactamases|CMY	AGU59995.1 KF305673.1:18-1163
NCBI	Bla|CMY-99_1_KF305673|betalactams|Class_C_betalactamases|CMY	gi|537366551|gb|KF305673.1|18-1163
Resfinder	Bla|CMY-99_1_KF305673|betalactams|Class_C_betalactamases|CMY	blaCMY-99_1_KF305673
ARG-ANNOT	Bla|VIM-10|AY524989|1-801|801|betalactams|Class_B_betalactamases|VIM	(Bla)VIM-10:AY524989:1-801:801
CARD	Bla|VIM-10|AY524989|1-801|801|betalactams|Class_B_betalactamases|VIM	@phgb|AY524989|0-801|ARO:3002280|VIM-10 [Pseudomonas aeruginosa]
Lahey	Bla|VIM-10|AY524989|1-801|801|betalactams|Class_B_betalactamases|VIM	AAS13761.1 AY524989.1:1-801
NCBI	Bla|VIM-10|AY524989|1-801|801|betalactams|Class_B_betalactamases|VIM	gi|42406216|gb|AY524989.1|1-801
Resfinder	Bla|VIM-10|AY524989|1-801|801|betalactams|Class_B_betalactamases|VIM	blaVIM-10_1_AY524989
NCBI	440|EU408347.1|EU408347|Multi-drug_resistance|Multi-drug_efflux_pumps|HLYD	gi|169647627|gb|EU408347.1|4733-5908
ARG-ANNOT	gi|360040231|gb|JN861779.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-211:JN861779:1-825:825
CARD	gi|360040231|gb|JN861779.1|betalactams|Class_D_betalactamases|OXA	@phgb|JN861779|0-825|ARO:3001710|OXA-211 [Acinetobacter johnsonii]
Lahey	gi|360040231|gb|JN861779.1|betalactams|Class_D_betalactamases|OXA	AEV91550.1 JN861779.1:1-825
NCBI	gi|360040231|gb|JN861779.1|betalactams|Class_D_betalactamases|OXA	gi|529088046|gb|KF453234.1|3-827 gi|360040231|gb|JN861779.1|1-825
Resfinder	gi|360040231|gb|JN861779.1|betalactams|Class_D_betalactamases|OXA	blaOXA-211_1_JN861779
ARG-ANNOT	gi|323709076|gb|HQ833652.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-104:HQ833652:245-1120:876
CARD	gi|323709076|gb|HQ833652.1|betalactams|Class_A_betalactamases|CTX	@phgb|HQ833652|235-1111|ARO:3001963|CTX-M-104 [Escherichia coli]
Lahey	gi|323709076|gb|HQ833652.1|betalactams|Class_A_betalactamases|CTX	ADY02555.1 HQ833652.1:236-1111
NCBI	gi|323709076|gb|HQ833652.1|betalactams|Class_A_betalactamases|CTX	gi|323709076|gb|HQ833652.1|236-1111 gi|282192945|gb|GU226840.1|1-876
Resfinder	gi|323709076|gb|HQ833652.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-104_1_HQ833652
ARG-ANNOT	Gly|VanB|AY655710|1-1029|1029|Glycopeptides|VanB-type_resistance_protein|VANB	(Gly)VanB:AY655710:1-1029:1029
CARD	Gly|VanB|AY655710|1-1029|1029|Glycopeptides|VanB-type_resistance_protein|VANB	@phgb|KF823969|5110-6139|ARO:3000013|vanB [Enterococcus faecium]
NCBI	Gly|VanB|AY655710|1-1029|1029|Glycopeptides|VanB-type_resistance_protein|VANB	gi|827342679|gb|KR066794.1|25292-24264 gi|577698901|gb|KF823969.1|5111-6139 gi|577698893|gb|KF823968.1|5102-6130 gi|452996204|gb|KC489786.1|2783-3811 gi|452996198|gb|KC489785.1|2783-3811 gi|216409875|dbj|AB374546.1|37415-38443 gi|56123443|gb|AY655710.1|1-1029 gi|61191895|gb|AY958220.1|22-1050
CARD	gi|757399511|gb|KP050488.1|betalactams|Class_A_betalactamases|SHV	@phgb|KP050487|0-861|ARO:3001350|SHV-180 [Klebsiella pneumoniae];@phgb|KP050488|0-861|ARO:3001350|SHV-180 [Klebsiella pneumoniae];@phgb|KP050488|0-861|ARO:3001363|SHV-181 [Klebsiella pneumoniae]
Lahey	gi|757399511|gb|KP050488.1|betalactams|Class_A_betalactamases|SHV	AJO16041.1 KP050488.1:1-861
NCBI	gi|757399511|gb|KP050488.1|betalactams|Class_A_betalactamases|SHV	gi|757399509|gb|KP050487.1|1-861
ARG-ANNOT	MLS|vgaa-LC|DQ823382|1-1569|1569|MLS|ABC_transporter|VGA	(MLS)vgaa-LC:DQ823382:1-1569:1569
CARD	MLS|vgaa-LC|DQ823382|1-1569|1569|MLS|ABC_transporter|VGA	@phgb|DQ823382|0-1569|ARO:3002830|vgaALC [Staphylococcus haemolyticus]
NCBI	MLS|vgaa-LC|DQ823382|1-1569|1569|MLS|ABC_transporter|VGA	gi|111608743|gb|DQ823382.1|1-1569 gi|641688293|emb|HG799495.1|70853-70880
NCBI	Rif|NC_002758.1120515|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|47208328|dbj|BA000017.4|603866-607417
CARD	Bla|CTX-M-10_1_AY598759|betalactams|Class_A_betalactamases|CTX	@phgb|AY598759|0-876|ARO:3001873|CTX-M-10 [Klebsiella pneumoniae]
NCBI	Bla|CTX-M-10_1_AY598759|betalactams|Class_A_betalactamases|CTX	gi|695210886|ref|NG_035976.1|5010-5885 gi|7649305|gb|AF255298.1|AF255298|1-873
Resfinder	Bla|CTX-M-10_1_AY598759|betalactams|Class_A_betalactamases|CTX	blaCTX-M-10_1_AY598759
NCBI	gi|2462700|emb|Y14156.1|betalactams|Class_A_betalactamases|CTX	gi|695198069|ref|NG_034895.1|1-905
ARG-ANNOT	Bla|TEM-82|AF427128|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-82:AF427128:209-1069:861
CARD	Bla|TEM-82|AF427128|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF427128|208-1069|ARO:3000949|TEM-82 [Escherichia coli]
Lahey	Bla|TEM-82|AF427128|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAL29434.1 AF427128.1:209-1069
NCBI	Bla|TEM-82|AF427128|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|16798371|gb|AF427128.1|AF427128|209-1069
Resfinder	Bla|TEM-82|AF427128|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-82_1_AF427128
NCBI	Bla|DQ463751.1|gene1|betalactams|Class_C_betalactamases|CMY	gi|641682562|emb|HG941718.1|4940343-4941549 gi|93277247|gb|DQ463751.1|15-1221 gi|90568484|gb|DQ438952.1|100-1306
ARG-ANNOT	Flq|QnrB19|EU432277|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB19:EU432277:1-645:645
CARD	Flq|QnrB19|EU432277|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JX298080|433-1078|ARO:3002734|QnrB19 [Escherichia coli]
NCBI	Flq|QnrB19|EU432277|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|910286593|gb|CP012163.1|71572-72216 gi|910286592|gb|CP012162.1|2206748-2206104 gi|910286592|gb|CP012162.1|3144902-3145546 gi|723228927|gb|CP009857.1|6130-6774 gi|723224425|gb|CP009852.1|30882-30238 gi|674654879|gb|KJ748372.1|61799-61155 gi|640855748|gb|CP007733.1|60684-60040 gi|486170688|gb|JX298080.1|434-1078 gi|486170680|gb|JX298079.1|434-1078 gi|384474818|emb|HE613857.1|20444-19800 gi|381351261|gb|JN985534.1|2688-2044
Resfinder	Flq|QnrB19|EU432277|1-645|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB19_1_HM146784
ARG-ANNOT	CARD|phgb|M55620|0-660|ARO:3002687|catQ|Phenicol|Chloramphenicol_acetyltransferases|CAT	(Phe)CatQ:M55620459-1118:660
CARD	CARD|phgb|M55620|0-660|ARO:3002687|catQ|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|M55620|0-660|ARO:3002687|catQ [Clostridium perfringens]
NCBI	CARD|phgb|M55620|0-660|ARO:3002687|catQ|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|144742|gb|M55620.1|CLOCATQ|459-1118
Resfinder	CARD|phgb|M55620|0-660|ARO:3002687|catQ|Phenicol|Chloramphenicol_acetyltransferases|CAT	catQ_1_M55620
CARD	MLS|AE000516.2|gene2130|MLS|23S_rRNA_methyltransferases|ERM37	@phgb|AL123456|2231679-2232219|ARO:3000392|Erm(37) [Mycobacterium tuberculosis H37Rv]
NCBI	MLS|AE000516.2|gene2130|MLS|23S_rRNA_methyltransferases|ERM37	gi|984994143|gb|CP010340.1|2248614-2249153 gi|984989958|gb|CP010339.1|2229687-2230226 gi|984985728|gb|CP010338.1|2227181-2227720 gi|984981517|gb|CP010337.1|2237328-2237867 gi|984976917|gb|CP010336.1|2220510-2221049 gi|984972452|gb|CP010335.1|2678950-2678411 gi|984967653|gb|CP010334.1|2217745-2218284 gi|984963331|gb|CP010333.1|2224599-2225138 gi|984950177|gb|CP010330.1|2238638-2239177 gi|984945858|gb|CP010329.1|2231735-2232274
ARG-ANNOT	gi|344179206|gb|JF460795.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-61:JF460795:1-1143:1143
CARD	gi|344179206|gb|JF460795.1|betalactams|Class_C_betalactamases|CMY	@phgb|JF460795|0-1143|ARO:3002074|CMY-61 [Escherichia coli]
Lahey	gi|344179206|gb|JF460795.1|betalactams|Class_C_betalactamases|CMY	AEM97673.1 JF460795.1:1-1143
NCBI	gi|344179206|gb|JF460795.1|betalactams|Class_C_betalactamases|CMY	gi|344179206|gb|JF460795.1|1-1143
Resfinder	gi|344179206|gb|JF460795.1|betalactams|Class_C_betalactamases|CMY	blaCMY-61_1_JF460795
NCBI	AGly|KJ363320.1|gene3|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|984348768|gb|KT425375.1|1024-1803 gi|975900838|gb|CP014005.1|53062-53841 gi|971497742|gb|CP012903.1|35748-36527 gi|971497538|gb|CP012902.1|59135-58356 gi|970338578|gb|KT725789.1|86995-86216 gi|970338460|gb|KT725788.1|92255-91476 gi|963885563|gb|KT355691.1|1068-1847 gi|963329770|gb|KT316808.1|982-1761 gi|958108507|emb|LN824138.1|5351-6130 gi|948288870|gb|KR259318.1|1066-1845
ARG-ANNOT	gi|11527183|gb|AF259520.1|betalactams|Class_C_betalactamases|DHA	(Bla)DHA-2:AF259520:1513-2652:1140
CARD	gi|11527183|gb|AF259520.1|betalactams|Class_C_betalactamases|DHA	@phgb|AF259520|1512-2652|ARO:3002133|DHA-2 [Klebsiella pneumoniae]
Lahey	gi|11527183|gb|AF259520.1|betalactams|Class_C_betalactamases|DHA	AAG36927.1 AF259520.1:1513-2652
NCBI	gi|11527183|gb|AF259520.1|betalactams|Class_C_betalactamases|DHA	gi|11527183|gb|AF259520.1|AF259520|1513-2652
Resfinder	gi|11527183|gb|AF259520.1|betalactams|Class_C_betalactamases|DHA	blaDHA-2_1_AF259520
CARD	gi|537430806|gb|KF057033.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF057033|0-825|ARO:3001687|OXA-316 [Acinetobacter baumannii]
Lahey	gi|537430806|gb|KF057033.1|betalactams|Class_D_betalactamases|OXA	AGU69254.1 KF057033.1:1-825
NCBI	gi|537430806|gb|KF057033.1|betalactams|Class_D_betalactamases|OXA	gi|537430806|gb|KF057033.1|1-825
NCBI	gi|38098484|gb|AY436361.1|betalactams|Class_A_betalactamases|TEM	gi|38098484|gb|AY436361.1|1-992
NCBI	1440|AY489045.1|AY489045|Glycopeptides|VanD-type_resistance_protein|VANXD	gi|40021670|gb|AY489045.1|5047-5655
Resfinder	1440|AY489045.1|AY489045|Glycopeptides|VanD-type_resistance_protein|VANXD	VanX-D_4_AY489045
CARD	1152|EU118148.2|EU118148|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF263519|1402-1798|ARO:3002583|AAC(6')-29a [Pseudomonas aeruginosa]
NCBI	1152|EU118148.2|EU118148|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|925170806|gb|KR337988.1|614-1009 gi|530452824|gb|KC907378.1|746-1141 gi|441482393|gb|JX982233.1|373-768 gi|370318313|gb|JF414727.1|473-868 gi|317018011|gb|GU390402.1|474-869 gi|239702130|emb|FN397626.1|302-697 gi|239702124|emb|FN397625.1|302-697 gi|239702118|emb|FN397624.1|295-690 gi|239702112|emb|FN397622.1|302-697 gi|239702107|emb|FN397621.1|302-697
ARG-ANNOT	Bla|CMY-10|AF373217|1-1149|1149|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-10:AF373217:1-1149:1149
CARD	Bla|CMY-10|AF373217|1-1149|1149|betalactams|Class_C_betalactamases|CMY	@phgb|AF357597|250-1399|ARO:3002021|CMY-10 [Enterobacter aerogenes]
Lahey	Bla|CMY-10|AF373217|1-1149|1149|betalactams|Class_C_betalactamases|CMY	AAK31368.1 AF357597.1:251-1399
NCBI	Bla|CMY-10|AF373217|1-1149|1149|betalactams|Class_C_betalactamases|CMY	gi|302371353|gb|AF373217.2|1-1149 gi|695214108|ref|NG_036737.1|5653-6801 gi|14318308|gb|AF381618.1|254-1402 gi|13591814|gb|AF357597.1|251-1399
Resfinder	Bla|CMY-10|AF373217|1-1149|1149|betalactams|Class_C_betalactamases|CMY	blaCMY-10_1_AF373218
CARD	CARD|phgb|JF802084|4337-5030|ARO:3002929|vanRN|Glycopeptides|VanN-type_regulator|VANRN	@phgb|JF802084|4337-5030|ARO:3002929|vanRN [Enterococcus faecium]
NCBI	CARD|phgb|JF802084|4337-5030|ARO:3002929|vanRN|Glycopeptides|VanN-type_regulator|VANRN	gi|507722025|gb|JF802084.2|4338-5031 gi|425702999|dbj|AB701345.1|7187-7880
NCBI	AGly|NC_005024.2598370|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|974700633|dbj|AP017321.1|1564-3008 gi|937637449|gb|KT601170.1|53746-52302 gi|908234448|gb|CP010309.1|342357-340913 gi|841330217|emb|LN866849.1|1591030-1592474 gi|822490352|gb|CP003939.1|1724078-1722634 gi|807232188|gb|CP011116.1|1632283-1630839 gi|756766642|gb|KJ922127.1|19641-18197 gi|748807120|gb|CP010526.1|59775-61219 gi|675304693|gb|CP007500.1|19567-18123 gi|663450275|gb|KC876750.1|2011-3455
CARD	CARD|phgb|AF353562|0-1110|ARO:3000481|tet35|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET35	@phgb|AF353562|0-1110|ARO:3000481|tet35 [Vibrio harveyi]
NCBI	CARD|phgb|AF353562|0-1110|ARO:3000481|tet35|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET35	gi|13655507|gb|AF353562.1|2213-3322
Resfinder	CARD|phgb|AF353562|0-1110|ARO:3000481|tet35|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET35	tet(35)_1_AF353562
CARD	CARD|phgb|AP009048|4153663-4154296|ARO:3000518|CRP|Multi-drug_resistance|MDR_regulator|CRP	@phgb|AP009048|4153663-4154296|ARO:3000518|CRP [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|AP009048|4153663-4154296|ARO:3000518|CRP|Multi-drug_resistance|MDR_regulator|CRP	gi|687670942|emb|LM993812.1|4093393-4094026 gi|85674274|dbj|AP009048.1|4153664-4154297
ARG-ANNOT	AGly|AacA29b|AY139599|768-1148|381|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)AacA29b:AY139599:768-1148:381
NCBI	AGly|AacA29b|AY139599|768-1148|381|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|371491873|gb|JN588530.1|33-413 gi|24209725|gb|AY139599.1|768-1148 gi|575870901|emb|HG530068.1|7477611-7477657
Resfinder	AGly|AacA29b|AY139599|768-1148|381|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aacA29_1_AY139599
ARG-ANNOT	Bla|CARB-3|S46063|122-1036|915|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-3:S46063:122-1036:915
CARD	Bla|CARB-3|S46063|122-1036|915|betalactams|Class_A_betalactamases|CARB	@phgb|S46063|121-1036|ARO:3002242|CARB-3 [Pseudomonas aeruginosa]
Lahey	Bla|CARB-3|S46063|122-1036|915|betalactams|Class_A_betalactamases|CARB	AAB19430.2 S46063.1:122-1036
NCBI	Bla|CARB-3|S46063|122-1036|915|betalactams|Class_A_betalactamases|CARB	gi|233319|gb|S46063.1|S46063|122-1036
Resfinder	Bla|CARB-3|S46063|122-1036|915|betalactams|Class_A_betalactamases|CARB	blaCARB-3_1_S46063
CARD	Mdr|CP000675.2|gene499|Multi-drug_resistance|Multi-drug_efflux_pumps|PMRA	@phgb|CP000675|520942-521980|ARO:3000822|pmrA efflux pump [Legionella pneumophila str. Corby]
NCBI	Mdr|CP000675.2|gene499|Multi-drug_resistance|Multi-drug_efflux_pumps|PMRA	gi|295647398|gb|CP001828.1|516125-517162 gi|225791049|gb|CP000675.2|520943-521980 gi|975107671|ref|XM_015413808.1|805-778 gi|975107669|ref|XM_015413807.1|619-592 gi|975107667|ref|XM_015413806.1|650-623
NCBI	1396|AJ419170.1|AJ419170|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|16945307|emb|AJ419170.1|118-687
Resfinder	1396|AJ419170.1|AJ419170|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA7_1_AJ419170
NCBI	Sul|CP0001138.1|gene3456|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|563346448|gb|CP006876.1|3347417-3346569 gi|197211055|gb|CP001138.1|3381795-3380947
NCBI	Mdr|NC_003112.2.903387|Macrolide|Penicillin|Multi-drug_resistance|Multi-drug_efflux_pumps|MTRD	gi|744797373|gb|CP006869.1|1796025-1799228 gi|325199235|gb|CP002420.1|536083-539286 gi|66731897|gb|AE002098.2|1795170-1791967
ARG-ANNOT	1634|AB985401.1|AB985401|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-2:HQ157204:747-1613:867;(Bla)CARB-8:GQ866976:1345-2211:867
NCBI	1634|AB985401.1|AB985401|betalactams|Class_A_betalactamases|CARB	gi|829496271|gb|KP420006.1|1359-2225 gi|815968487|gb|CP011317.1|5587392-5588258 gi|800908878|gb|KP345882.1|99012-98146 gi|777182157|emb|LN829403.1|70646-71512 gi|766547679|gb|KP116299.1|40819-41685 gi|742994109|gb|CP010391.1|50752-49886 gi|704485843|gb|KJ186153.1|37322-38188 gi|686483924|gb|KM111262.1|167-1033 gi|675294670|dbj|AB985401.1|1023-1889 gi|660573358|gb|CP008790.1|139113-139979
ARG-ANNOT	Bla|CFE-1|AB107899|1008-2153|1161|betalactams|Class_C_betalactamases|CMY	(Bla)CFE-1:AB107899:1008-2153:1161
CARD	Bla|CFE-1|AB107899|1008-2153|1161|betalactams|Class_C_betalactamases|CMY	@phgb|AB107899|1007-2153|ARO:3001856|CFE-1 [Escherichia coli]
Lahey	Bla|CFE-1|AB107899|1008-2153|1161|betalactams|Class_C_betalactamases|CMY	BAC76072.1 AB107899.1:1008-2153
NCBI	Bla|CFE-1|AB107899|1008-2153|1161|betalactams|Class_C_betalactamases|CMY	gi|695209499|ref|NG_035840.1|1008-2153
Resfinder	Bla|CFE-1|AB107899|1008-2153|1161|betalactams|Class_C_betalactamases|CMY	blaCFE-1_1_AB107899
NCBI	Tet|tetA_P_4_AB001076|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	gi|932127861|gb|CP009558.1|11043-12305 gi|349590089|gb|JN689220.1|40052-41314 gi|1845539|dbj|AB001076.1|329-1591 gi|32815048|gb|AY304475.1|1-663
Resfinder	Tet|tetA_P_4_AB001076|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETA	tetA(P)_4_AB001076
NCBI	gi|19852069|gb|AF488377.1|betalactams|Class_A_betalactamases|CTX	gi|19852069|gb|AF488377.1|1-950
NCBI	gi|26892103|gb|AY165025.1|betalactams|Class_B_betalactamases|VIM	gi|925170830|gb|KR337993.1|115-942 gi|825088620|gb|KP975076.1|26784-25957 gi|222446218|emb|FM994936.1|972-1799 gi|145321079|gb|EF522838.1|1057-1884 gi|26892103|gb|AY165025.1|1-828
ARG-ANNOT	Bla|CMY-73|GQ351345|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-73:GQ351345:1-1146:1146
CARD	Bla|CMY-73|GQ351345|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|GQ351345|0-1146|ARO:3002086|CMY-73 [Citrobacter freundii]
Lahey	Bla|CMY-73|GQ351345|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ACU00152.1 GQ351345.1:1-1146
NCBI	Bla|CMY-73|GQ351345|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|255046259|gb|GQ351345.1|1-1146
Resfinder	Bla|CMY-73|GQ351345|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-73_1_GQ351345
ARG-ANNOT	Bla|OXA-109|FJ157357|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-109:FJ157357:1-825:825
CARD	Bla|OXA-109|FJ157357|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|EF650035|0-825|ARO:3001640|OXA-109 [Acinetobacter baumannii]
Lahey	Bla|OXA-109|FJ157357|1-825|825|betalactams|Class_D_betalactamases|OXA	ABV31689.1 EF650035.1:1-825
NCBI	Bla|OXA-109|FJ157357|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|322506180|gb|CP001921.1|2133109-2132285 gi|157285904|gb|EF650035.1|1-825
Resfinder	Bla|OXA-109|FJ157357|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-109_1_EF650035
CARD	MLS|DQ157752.1|gene4|MLS|Macrolide_esterases|EREA	@phgb|DQ157752|2699-3920|ARO:3000361|EreA [Escherichia coli]
NCBI	MLS|DQ157752.1|gene4|MLS|Macrolide_esterases|EREA	gi|73913580|gb|DQ157752.1|2700-3920
NCBI	Tet|tetD_5_X65876|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETD	gi|49073|emb|X65876.1|1521-2705
Resfinder	Tet|tetD_5_X65876|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETD	tet(D)_5_X65876
CARD	Bla|X96858.1|gene1|betalactams|Class_B_betalactamases|BLAB	@phgb|X96858|113-863|ARO:3000579|BlaB beta-lactamase [Elizabethkingia meningoseptica]
NCBI	Bla|X96858.1|gene1|betalactams|Class_B_betalactamases|BLAB	gi|2065034|emb|X96858.1|114-863
ARG-ANNOT	gi|388890592|gb|JQ734687.1|betalactams|Class_B_betalactamases|NDM	(Bla)NDM-3:JQ734687:1-813:813
CARD	gi|388890592|gb|JQ734687.1|betalactams|Class_B_betalactamases|NDM	@phgb|JQ734687|0-813|ARO:3002354|NDM-3 [Escherichia coli]
Lahey	gi|388890592|gb|JQ734687.1|betalactams|Class_B_betalactamases|NDM	AFK80349.1 JQ734687.1:1-813
NCBI	gi|388890592|gb|JQ734687.1|betalactams|Class_B_betalactamases|NDM	gi|695214950|ref|NG_036919.1|882-1694 gi|532025274|gb|KC999035.1|18392-19204 gi|695226702|ref|NG_041559.1|1-813
Resfinder	gi|388890592|gb|JQ734687.1|betalactams|Class_B_betalactamases|NDM	blaNDM-3_1_JQ734687
ARG-ANNOT	gi|317446359|emb|FR682582.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-100:FR682582:1-876:876
CARD	gi|317446359|emb|FR682582.1|betalactams|Class_A_betalactamases|CTX	@phgb|FR682582|0-876|ARO:3001959|CTX-M-100 [Escherichia coli]
Lahey	gi|317446359|emb|FR682582.1|betalactams|Class_A_betalactamases|CTX	CBW46935.1 FR682582.1:1-876
NCBI	gi|317446359|emb|FR682582.1|betalactams|Class_A_betalactamases|CTX	gi|695220975|ref|NG_039596.1|1-876
Resfinder	gi|317446359|emb|FR682582.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-100_1_FR682582
ARG-ANNOT	Bla|OCH-3|AJ295341|1-1173|1173|betalactams|Class_C_betalactamases|OCH	(Bla)OCH-3:AJ295341:1-1173:1173
CARD	Bla|OCH-3|AJ295341|1-1173|1173|betalactams|Class_C_betalactamases|OCH	@phgb|AJ295341|0-1173|ARO:3002516|OCH-3 [Ochrobactrum anthropi]
NCBI	Bla|OCH-3|AJ295341|1-1173|1173|betalactams|Class_C_betalactamases|OCH	gi|11544700|emb|AJ295341.1|1-1173
Resfinder	Bla|OCH-3|AJ295341|1-1173|1173|betalactams|Class_C_betalactamases|OCH	blaOCH-3_1_AJ295341
NCBI	887|AY171578.1|AY171578|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETC	gi|27543325|gb|AY171578.1|1-567 gi|961454907|gb|KT991389.1|3654-3683 gi|961454902|gb|KT991388.1|6978-7007
CARD	CARD|pvgb|NC_002695|4990140-4994169|ARO:3003288|Escherichia|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	@pvgb|NC_002695|4990140-4994169|ARO:3003288|Escherichia coli rpoB mutants conferring resistance to rifampicin [Escherichia coli O157:H7 str. Sakai]
NCBI	CARD|pvgb|NC_002695|4990140-4994169|ARO:3003288|Escherichia|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|937297913|gb|CP012802.1|4862520-4866549 gi|667689599|gb|CP008957.1|5077767-5081796 gi|386794017|gb|CP001925.1|4916880-4920909 gi|374356928|gb|CP003109.1|4786110-4790139 gi|290760697|gb|CP001846.1|4877781-4881810 gi|47118301|dbj|BA000007.2|4990141-4994170 gi|209751807|gb|EU891630.1|1-4029
CARD	gi|692334119|gb|KM103296.1|betalactams|Class_A_betalactamases|IMI	@phgb|KM103296|0-879|ARO:3003177|IMI-7 [Enterobacter cloacae]
Lahey	gi|692334119|gb|KM103296.1|betalactams|Class_A_betalactamases|IMI	AIS19858.1 KM103296.1:1-879
NCBI	gi|692334119|gb|KM103296.1|betalactams|Class_A_betalactamases|IMI	gi|692334119|gb|KM103296.1|1-879
CARD	CARD|phgb|JN868716|682-2029|ARO:3000835|phoQ|Multi-drug_resistance|MDR_regulator|PHOQ	@phgb|JN868716|682-2029|ARO:3000835|phoQ [Pseudomonas aeruginosa]
NCBI	CARD|phgb|JN868716|682-2029|ARO:3000835|phoQ|Multi-drug_resistance|MDR_regulator|PHOQ	gi|984361056|gb|CP008873.1|3714729-3716075 gi|974327848|gb|CP008866.1|5813131-5814477 gi|974319461|gb|CP008865.1|338710-337364 gi|974282928|gb|CP008861.1|6037862-6039208 gi|974275390|gb|CP008860.1|5594795-5593449 gi|946706141|emb|LN870292.1|4194667-4193321 gi|927993303|gb|CP012679.1|4303079-4301733 gi|927226644|gb|CP004054.2|4303079-4301733 gi|861670927|gb|CP012001.1|4245157-4243811 gi|777183107|emb|LN831024.1|4244586-4243240
CARD	gi|570348258|gb|KF958750.1|betalactams|Class_A_betalactamases|IMI	@phgb|KF958750|0-879|ARO:3001861|IMI-4 [Enterobacter cloacae]
Lahey	gi|570348258|gb|KF958750.1|betalactams|Class_A_betalactamases|IMI	AHE78014.1 KF958750.1:1-879
NCBI	gi|570348258|gb|KF958750.1|betalactams|Class_A_betalactamases|IMI	gi|570348258|gb|KF958750.1|1-879
NCBI	Flq|FN543093.2|gene2948|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|323575285|emb|FN543093.2|3008219-3005583
ARG-ANNOT	Bla|OXY-1-5_5_AY077486|betalactams|Class_A_betalactamases|OXY	(Bla)OXY1-5:AY077483:181-1056:876
NCBI	Bla|OXY-1-5_5_AY077486|betalactams|Class_A_betalactamases|OXY	gi|18844713|gb|AY077486.1|181-1050 gi|219920928|emb|FM178426.1|1-825
Resfinder	Bla|OXY-1-5_5_AY077486|betalactams|Class_A_betalactamases|OXY	blaOXY-1-5_5_AY077486
CARD	MLS|lnuF_3_AJ561197|MLS|Lincosamide_nucleotidyltransferases|LNUF	@phgb|AJ561197|1320-2142|ARO:3002839|lnuF [Escherichia coli]
NCBI	MLS|lnuF_3_AJ561197|MLS|Lincosamide_nucleotidyltransferases|LNUF	gi|47169664|emb|AJ561197.2|1321-2142
Resfinder	MLS|lnuF_3_AJ561197|MLS|Lincosamide_nucleotidyltransferases|LNUF	lnu(F)_3_AJ561197
CARD	CARD|phgb|AY339625|3640-4786|ARO:3002024|CMY-13|betalactams|Class_C_betalactamases|CMY	@phgb|AY339625|3640-4786|ARO:3002024|CMY-13 [Escherichia coli]
NCBI	CARD|phgb|AY339625|3640-4786|ARO:3002024|CMY-13|betalactams|Class_C_betalactamases|CMY	gi|695210321|ref|NG_035929.1|3641-4787
ARG-ANNOT	Bla|CMY-51|JQ733571|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-51:JQ733571:1028-2173:1146
CARD	Bla|CMY-51|JQ733571|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ733571|1027-2173|ARO:3002062|CMY-51 [Citrobacter freundii]
Lahey	Bla|CMY-51|JQ733571|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	AFK73431.1 JQ733571.1:1028-2173
NCBI	Bla|CMY-51|JQ733571|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	gi|620596490|dbj|AB931163.1|811-1956 gi|388564827|gb|JQ733571.1|1028-2173
Resfinder	Bla|CMY-51|JQ733571|1028-2173|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-51_1_JQ733571
Lahey	Bla|CMY-8_2_DQ094251|betalactams|Class_C_betalactamases|CMY	AAZ03413.1 DQ094251.1:1-1149
NCBI	Bla|CMY-8_2_DQ094251|betalactams|Class_C_betalactamases|CMY	gi|69139105|gb|DQ094251.1|1-1149
Resfinder	Bla|CMY-8_2_DQ094251|betalactams|Class_C_betalactamases|CMY	blaCMY-8_2_DQ094251
CARD	CARD|phgb|AHEL01000071|3243-4143|ARO:3000318|mphB|MLS|Macrolide_phosphotransferases|MPHB	@phgb|AHEL01000071|3243-4143|ARO:3000318|mphB [Bacillus cereus K-5975c]
CARD	Flq|QnrB72_1_KC741443|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC741443|0-645|ARO:3002784|QnrB72 [Citrobacter sp. TR21_24]
NCBI	Flq|QnrB72_1_KC741443|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|805300649|gb|KP339263.1|178-822 gi|511774221|gb|KC741443.1|1-645
Resfinder	Flq|QnrB72_1_KC741443|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB72_1_KC741443
CARD	Phe|NC_004973.1.1449618|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|AJ271879|6756-7398|ARO:3002685|catIII [uncultured bacterium]
NCBI	Phe|NC_004973.1.1449618|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|399920115|gb|JN202624.1|3099-3740 gi|267986555|gb|CP001136.1|34730-34089 gi|189096565|gb|EU715370.1|3829-4470 gi|134039038|gb|EF467364.1|1501-2142 gi|95114362|gb|DQ489999.1|1-642 gi|18693100|emb|AJ319822.1|2661-3302 gi|12054883|emb|AJ249249.1|2495-3136 gi|7007382|emb|AJ271879.1|6757-7398 gi|88853289|emb|AM183225.1|11376-12017 gi|418206109|gb|JX826405.1|7096-6560 gi|418206109|gb|JX826405.1|8457-8353
ARG-ANNOT	gi|73622524|gb|DQ149247.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-86:DQ149247:1-825:825
CARD	gi|73622524|gb|DQ149247.1|betalactams|Class_D_betalactamases|OXA	@phgb|DQ149247|0-825|ARO:3001703|OXA-86 [Acinetobacter baumannii]
Lahey	gi|73622524|gb|DQ149247.1|betalactams|Class_D_betalactamases|OXA	AAZ78361.1 DQ149247.1:1-825
NCBI	gi|73622524|gb|DQ149247.1|betalactams|Class_D_betalactamases|OXA	gi|73622524|gb|DQ149247.1|1-825
Resfinder	gi|73622524|gb|DQ149247.1|betalactams|Class_D_betalactamases|OXA	blaOXA-86_1_DQ149247
NCBI	gi|114386383|gb|DQ834729.1|betalactams|Class_A_betalactamases|TEM	gi|114386383|gb|DQ834729.1|1-1066
CARD	Mdr|AB015853.1|gene1|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXX	@phgb|AB015853|145-1315|ARO:3003034|mexX [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|AB015853.1|gene1|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXX	gi|3868982|dbj|AB015853.1|146-1315
ARG-ANNOT	MLS|CfrA|AM408573|10028-11077|1050|Phenicol|Florfenicol_methyltransferases|CFRA	(MLS)CfrA:AM408573:10028-11077:1050;(Phe)Cfr:AJ579365:6290-7339:1050
CARD	MLS|CfrA|AM408573|10028-11077|1050|Phenicol|Florfenicol_methyltransferases|CFRA	@phgb|NC_005076|6289-7339|ARO:3003441|cfrA [Staphylococcus sciuri];@phgb|KF152885|110696-111746|ARO:3003441|cfrA [Escherichia coli]
NCBI	MLS|CfrA|AM408573|10028-11077|1050|Phenicol|Florfenicol_methyltransferases|CFRA	gi|937637449|gb|KT601170.1|46188-45139 gi|930580159|gb|KP229554.1|1577-2626 gi|927776045|gb|KR005621.1|2040-991 gi|817181192|gb|KP777553.1|24449-23400 gi|768965536|gb|KM521837.1|22993-24042 gi|768965479|gb|KM521836.1|19149-18100 gi|756766642|gb|KJ922127.1|21730-22779 gi|751373065|gb|KM580533.1|7343-8392 gi|751373027|gb|KM580532.1|7343-8392 gi|696158251|gb|KJ866414.1|958-2007
CARD	MLS|ermB_11_M19270|MLS|23S_rRNA_methyltransferases|ERMB	@phgb|M19270|921-1659|ARO:3000375|ErmB [Plasmid pIP1527]
NCBI	MLS|ermB_11_M19270|MLS|23S_rRNA_methyltransferases|ERMB	gi|150713|gb|M19270.1|PI1ERMBC|922-1659
Resfinder	MLS|ermB_11_M19270|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_11_M19270
ARG-ANNOT	Bla|B-2|AF189300|1-750|750|betalactams|Class_B_betalactamases|BLAB	(Bla)B-2:AF189300:1-750:750
NCBI	Bla|B-2|AF189300|1-750|750|betalactams|Class_B_betalactamases|BLAB	gi|9587059|gb|AF189300.1|AF189300|1-750 gi|5430711|gb|AF126542.1|AF126542|866-1615
Resfinder	Bla|B-2|AF189300|1-750|750|betalactams|Class_B_betalactamases|BLAB	blaB-2_1_AF189300
CARD	gi|675599448|gb|KJ934267.1|betalactams|Class_A_betalactamases|CARB	@phgb|KJ934267|0-852|ARO:3003175|CARB-19 [Vibrio parahaemolyticus]
Lahey	gi|675599448|gb|KJ934267.1|betalactams|Class_A_betalactamases|CARB	AIL92328.1 KJ934267.1:1-852
NCBI	gi|675599448|gb|KJ934267.1|betalactams|Class_A_betalactamases|CARB	gi|675599448|gb|KJ934267.1|1-852
ARG-ANNOT	gi|293628082|gb|GU932590.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-128:GU932590:1-861:861
CARD	gi|293628082|gb|GU932590.1|betalactams|Class_A_betalactamases|SHV	@phgb|GU932590|0-861|ARO:3001175|SHV-128 [Enterobacter cloacae]
Lahey	gi|293628082|gb|GU932590.1|betalactams|Class_A_betalactamases|SHV	ADE58494.1 GU932590.1:1-861
NCBI	gi|293628082|gb|GU932590.1|betalactams|Class_A_betalactamases|SHV	gi|293628082|gb|GU932590.1|1-861
Resfinder	gi|293628082|gb|GU932590.1|betalactams|Class_A_betalactamases|SHV	blaSHV-128_1_GU932590
ARG-ANNOT	Gly|VanC2-3|EU151755|29-1081|1083|Glycopeptides|VanC-type_resistance_protein|VANC	(Gly)VanC2/3:EU151755:29-1081:1083
NCBI	Gly|VanC2-3|EU151755|29-1081|1083|Glycopeptides|VanC-type_resistance_protein|VANC	gi|161779860|gb|EU151755.1|29-1081 gi|345287339|gb|JN003410.1|1-386
ARG-ANNOT	Tmt|DfrA17|AB126604|98-571|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA17:AB126604:98-571:474
CARD	Tmt|DfrA17|AB126604|98-571|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|DQ838665|0-474|ARO:3002860|dfrA17 [Pseudomonas aeruginosa]
NCBI	Tmt|DfrA17|AB126604|98-571|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|970698242|gb|KT988020.1|20696-21169 gi|970698221|gb|KT988019.1|5508-5981 gi|970698093|gb|KT988018.1|113182-113655 gi|973715451|gb|CP013836.1|116491-116964 gi|973705327|gb|CP013832.1|16138-15665 gi|971520763|gb|CP008715.1|80172-80645 gi|966344247|gb|KT305945.1|79-552 gi|966344244|gb|KT305944.1|79-552 gi|966344241|gb|KT305943.1|71-544 gi|963329632|gb|KT316805.1|78-551
Resfinder	Tmt|DfrA17|AB126604|98-571|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	dfrA17_1_FJ460238
NCBI	MLS|M62487.1|gene1|MLS|23S_rRNA_methyltransferases|ERMF	gi|143942|gb|M62487.1|BNRERMFU|259-1071
NCBI	Rif|AL009126.3|gene138|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|983204966|gb|CP014166.1|121918-125499 gi|846133629|gb|CP011882.1|1074506-1078087 gi|807072327|gb|CP011115.1|121918-125499 gi|749183975|gb|CP010314.1|121919-125500 gi|728887195|gb|CP010053.1|121918-125499 gi|728882887|gb|CP010052.1|121919-125500 gi|724425628|emb|LN680001.1|121915-125496 gi|723796434|emb|LN649259.1|121915-125496 gi|670919138|gb|CP005997.1|115843-119424 gi|649013680|gb|CP008698.1|121919-125500
ARG-ANNOT	1850|AF156486.1|AF156486|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	(AGly)AadA2:X68227:66-945:780
CARD	1850|AF156486.1|AF156486|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	@phgb|AF156486|5012-5792|ARO:3002602|aadA2 [Klebsiella pneumoniae]
NCBI	1850|AF156486.1|AF156486|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|973585379|gb|KP054476.2|51854-52633 gi|971338783|gb|CP006659.2|2297697-2298476 gi|966344239|gb|KT291741.1|104-883 gi|957657109|dbj|LC099465.1|57-836 gi|953007066|gb|CP013143.1|18-797 gi|937637492|gb|KT334335.1|96751-95972 gi|928083869|gb|CP012682.1|16954-16175 gi|928083869|gb|CP012682.1|73657-72878 gi|923091304|gb|KP942843.1|132-911 gi|918400318|dbj|AP014939.1|110927-111706 gi|908266278|gb|CP012170.1|134691-133912
Resfinder	1850|AF156486.1|AF156486|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	aadA2_1_X68227
ARG-ANNOT	Bla|OXA-176|HM113562|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-176:HM113562:1-825:825
CARD	Bla|OXA-176|HM113562|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HM113562|0-825|ARO:3001660|OXA-176 [Acinetobacter baumannii]
Lahey	Bla|OXA-176|HM113562|1-825|825|betalactams|Class_D_betalactamases|OXA	ADI58620.1 HM113562.1:1-825
NCBI	Bla|OXA-176|HM113562|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|298113027|gb|HM113562.1|1-825
Resfinder	Bla|OXA-176|HM113562|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-176_1_HM113562
CARD	Bla|FJ666064.1|gene1|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666064|0-1194|ARO:3002498|PDC-2 [Pseudomonas aeruginosa]
Lahey	Bla|FJ666064.1|gene1|betalactams|Class_C_betalactamases|PDC	ACQ82806.1 FJ666064.1:1-1194
NCBI	Bla|FJ666064.1|gene1|betalactams|Class_C_betalactamases|PDC	gi|229597517|gb|FJ666064.1|1-1194
CARD	gi|694179061|gb|KM211510.1|betalactams|Class_A_betalactamases|CTX	@phgb|KM211510|0-876|ARO:3003165|CTX-M-157 [Klebsiella pneumoniae]
Lahey	gi|694179061|gb|KM211510.1|betalactams|Class_A_betalactamases|CTX	AIS67613.1 KM211510.1:1-876
NCBI	gi|694179061|gb|KM211510.1|betalactams|Class_A_betalactamases|CTX	gi|694179061|gb|KM211510.1|1-876
ARG-ANNOT	Bla|IMP-44|AB777501|1399-2136|738|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-44:AB777501:1399-2136:738
CARD	Bla|IMP-44|AB777501|1399-2136|738|betalactams|Class_B_betalactamases|IMP	@phgb|AB777501|1398-2136|ARO:3002235|IMP-44 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-44|AB777501|1399-2136|738|betalactams|Class_B_betalactamases|IMP	BAM98942.1 AB777501.1:1399-2136
NCBI	Bla|IMP-44|AB777501|1399-2136|738|betalactams|Class_B_betalactamases|IMP	gi|459978576|dbj|AB777501.1|1399-2136
Resfinder	Bla|IMP-44|AB777501|1399-2136|738|betalactams|Class_B_betalactamases|IMP	blaIMP-44_1_AB777501
ARG-ANNOT	Bla|OXA-171|HM488992|1-822|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-171:HM488992:1-822:822
CARD	Bla|OXA-171|HM488992|1-822|822|betalactams|Class_D_betalactamases|OXA	@phgb|HM488992|0-822|ARO:3001471|OXA-171 [Acinetobacter baumannii]
Lahey	Bla|OXA-171|HM488992|1-822|822|betalactams|Class_D_betalactamases|OXA	ADK35875.1 HM488992.1:1-822
NCBI	Bla|OXA-171|HM488992|1-822|822|betalactams|Class_D_betalactamases|OXA	gi|300825681|gb|HM488992.1|1-822
Resfinder	Bla|OXA-171|HM488992|1-822|822|betalactams|Class_D_betalactamases|OXA	blaOXA-171_1_HM488992
ARG-ANNOT	Bla|CMY-60|JF460794|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-60:JF460794:1-1146:1146
CARD	Bla|CMY-60|JF460794|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JF460794|0-1146|ARO:3002073|CMY-60 [Escherichia coli]
Lahey	Bla|CMY-60|JF460794|1-1146|1146|betalactams|Class_C_betalactamases|CMY	AEM97672.1 JF460794.1:1-1146
NCBI	Bla|CMY-60|JF460794|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|344179204|gb|JF460794.1|1-1146
ARG-ANNOT	AGly|Aac6-Iq|AF047556|127-678|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iq:AF047556:127-678:552
CARD	AGly|Aac6-Iq|AF047556|127-678|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF047556|126-678|ARO:3002560|AAC(6')-Iq [Klebsiella pneumoniae]
NCBI	AGly|Aac6-Iq|AF047556|127-678|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|184216053|gb|EU622037.1|213-764 gi|695198413|ref|NG_034972.1|127-678
Resfinder	AGly|Aac6-Iq|AF047556|127-678|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iq_1_AF047556
ARG-ANNOT	Bla|CMY-11|AF381626|254-1402|1149|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-11:AF381626:254-1402:1149
CARD	Bla|CMY-11|AF381626|254-1402|1149|betalactams|Class_C_betalactamases|CMY	@phgb|AF357599|253-1402|ARO:3002022|CMY-11 [Escherichia coli]
Lahey	Bla|CMY-11|AF381626|254-1402|1149|betalactams|Class_C_betalactamases|CMY	AAK31370.1 AF357599.1:254-1402
NCBI	Bla|CMY-11|AF381626|254-1402|1149|betalactams|Class_C_betalactamases|CMY	gi|695214120|ref|NG_036738.1|6567-7715 gi|13591818|gb|AF357599.1|254-1402
Resfinder	Bla|CMY-11|AF381626|254-1402|1149|betalactams|Class_C_betalactamases|CMY	blaCMY-11_1_AF381626
NCBI	Flq|NC_002745.1124026|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|984671414|emb|LT009690.1|1401198-1403600 gi|927048389|gb|CP010890.1|1362542-1364944 gi|925190036|gb|CP012593.1|1360870-1363272 gi|595636499|gb|CP007454.1|2534271-2531869 gi|47118324|dbj|BA000018.3|1356325-1358727
NCBI	Bla|AJ536835.1|gene1|betalactams|Class_B_betalactamases|VIM	gi|156104616|emb|AM778842.1|13155-12348 gi|30014071|emb|AJ536835.1|140-947
CARD	CARD|pvgb|NC_007795|2155375-2156860|ARO:3003074|Staphylococcus|Lipopeptides|Daptomycin-resistant_cls|CLS|RequiresSNPConfirmation	@pvgb|NC_007795|2155375-2156860|ARO:3003074|Staphylococcus aureus cls conferring resistance to daptomycin [Staphylococcus aureus subsp. aureus NCTC 8325]
NCBI	CARD|pvgb|NC_007795|2155375-2156860|ARO:3003074|Staphylococcus|Lipopeptides|Daptomycin-resistant_cls|CLS|RequiresSNPConfirmation	gi|984671414|emb|LT009690.1|2173226-2174711 gi|974697948|dbj|AP017320.1|2202569-2204054 gi|974161314|gb|CP012018.1|2300474-2301959 gi|974158397|gb|CP012015.1|2301501-2302986 gi|974155539|gb|CP012013.1|2309625-2311110 gi|974152716|gb|CP012012.1|2289200-2290685 gi|974149849|gb|CP012011.1|2358460-2359945 gi|941146344|gb|CP007676.1|2178237-2179722 gi|941142962|gb|CP007672.1|2177571-2179056 gi|927048389|gb|CP010890.1|2125110-2126595
CARD	CARD|phgb|D16099|409-1297|ARO:3001300|myrA|MLS|23S_rRNA_methyltransferases|MYRA	@phgb|D16099|409-1297|ARO:3001300|myrA [Micromonospora griseorubida]
NCBI	CARD|phgb|D16099|409-1297|ARO:3001300|myrA|MLS|23S_rRNA_methyltransferases|MYRA	gi|286052|dbj|D16099.1|MPUMYRA|410-1298
NCBI	Phe|AJ87033.2|gene3|Phenicol|Phenicol_efflux_pumps|CML	gi|114421723|emb|AJ487033.2|1399-2858
NCBI	gi|25989459|gb|AY079099.1|betalactams|Class_A_betalactamases|SHV	gi|195954365|gb|EU979559.1|57-1032 gi|25989459|gb|AY079099.1|149-1124
ARG-ANNOT	Bla|KPC-7|EU729727|1-882|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-7:EU729727:1-882:882
CARD	Bla|KPC-7|EU729727|1-882|882|betalactams|Class_A_betalactamases|KPC	@phgb|EU729727|0-882|ARO:3002317|KPC-7 [Klebsiella pneumoniae]
Lahey	Bla|KPC-7|EU729727|1-882|882|betalactams|Class_A_betalactamases|KPC	ACE62798.1 EU729727.1:1-882
NCBI	Bla|KPC-7|EU729727|1-882|882|betalactams|Class_A_betalactamases|KPC	gi|189916550|gb|EU729727.1|1-882
Resfinder	Bla|KPC-7|EU729727|1-882|882|betalactams|Class_A_betalactamases|KPC	blaKPC-7_1_EU729727
CARD	Tet|tetL_4_M11036|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	@phgb|M11036|0-1377|ARO:3000179|tetL [Geobacillus stearothermophilus]
NCBI	Tet|tetL_4_M11036|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	gi|143737|gb|M11036.1|BACTHT15|189-1565
Resfinder	Tet|tetL_4_M11036|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	tet(L)_4_M11036
ARG-ANNOT	Bla|SHV-12|FJ685654|24-860|837|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-12:FJ685654:24-860:837
NCBI	Bla|SHV-12|FJ685654|24-860|837|betalactams|Class_A_betalactamases|SHV	gi|961666360|gb|KT185451.1|77461-76601 gi|954629879|gb|CP013215.1|268471-269331 gi|933686117|gb|KR827393.1|97059-97919 gi|918463070|gb|KP987216.1|9638-8778 gi|817046807|gb|KP893385.1|116953-116093 gi|908266278|gb|CP012170.1|159168-160028 gi|902618894|gb|CP011987.1|37160-38020 gi|902611358|gb|CP011977.1|33484-34344 gi|902604381|gb|CP011983.1|6514-7374 gi|873464235|gb|KR059865.1|7838-8698
Resfinder	Bla|SHV-12|FJ685654|24-860|837|betalactams|Class_A_betalactamases|SHV	blaSHV-12_1_AF462395
CARD	MLS|JQ861959.1|gene11|MLS|Lincosamide_nucleotidyltransferases|LNUB	@phgb|KC688833|0-804|ARO:3002836|lnuB [Streptococcus lutetiensis]
NCBI	MLS|JQ861959.1|gene11|MLS|Lincosamide_nucleotidyltransferases|LNUB	gi|984737891|gb|CP013476.1|832161-831358 gi|827342679|gb|KR066794.1|16259-15456 gi|927930179|gb|KP998101.1|3617-4420 gi|927820524|gb|KT448822.1|2280-1477 gi|927820498|gb|KT448821.1|13761-12958 gi|927820473|gb|KT448820.1|13762-12959 gi|927820421|gb|KT448818.1|13763-12960 gi|927820398|gb|KT448817.1|13761-12958 gi|908777994|gb|KR936172.1|13761-12958 gi|770542082|gb|KP339868.1|8323-9126
ARG-ANNOT	1036|KC149527.1|KC149527|betalactams|Class_B_betalactamases|NDM	(Bla)NDM-1:JQ080305:1-813:813
Lahey	1036|KC149527.1|KC149527|betalactams|Class_B_betalactamases|NDM	CAZ39946.1 FN396876.1:3219-2407
NCBI	1036|KC149527.1|KC149527|betalactams|Class_B_betalactamases|NDM	gi|974752094|gb|KT164809.1|1311-2123 gi|974752068|gb|KT164808.1|8334-9146 gi|974570295|emb|LN997846.1|3255978-3255166 gi|971825756|dbj|LC107774.1|1-813 gi|971497891|gb|CP012901.1|4095905-4096717 gi|971497742|gb|CP012903.1|22174-22986 gi|971497538|gb|CP012902.1|62381-63193 gi|969535508|gb|KT364224.1|1-813 gi|969535508|gb|KT364224.1|3239-4051 gi|963776569|gb|KU162940.1|1-813 gi|963776554|gb|KT365396.1|1-813
CARD	CARD|phgb|EU408347|10174-11083|ARO:3002485|LRA-2|betalactams|Class_B_betalactamases|LRA	@phgb|EU408347|10174-11083|ARO:3002485|LRA-2 [uncultured bacterium BLR2]
NCBI	CARD|phgb|EU408347|10174-11083|ARO:3002485|LRA-2|betalactams|Class_B_betalactamases|LRA	gi|169647627|gb|EU408347.1|10175-11084
CARD	CARD|pvgb|CP003248|4246691-4249988|ARO:3003465|Mycobacterium|Rifampin|Rifampin-resistant_embB|embB|RequiresSNPConfirmation	@pvgb|AL123456|4246513-4249810|ARO:3003326|Mycobacterium tuberculosis embB mutations conferring resistance to ethambutol [Mycobacterium tuberculosis H37Rv];@pvgb|CP003248|4246691-4249988|ARO:3003465|Mycobacterium tuberculosis embB mutants conferring resistance to rifampicin [Mycobacterium tuberculosis H37Rv];@pvgb|AL123456|4246513-4249810|ARO:3003465|Mycobacterium tuberculosis embB mutants conferring resistance to rifampicin [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|CP003248|4246691-4249988|ARO:3003465|Mycobacterium|Rifampin|Rifampin-resistant_embB|embB|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|4260186-4263482 gi|984989958|gb|CP010339.1|4234422-4237718 gi|984981517|gb|CP010337.1|4236761-4240057 gi|984950177|gb|CP010330.1|4256889-4260185 gi|984945858|gb|CP010329.1|4263618-4266914 gi|755917060|gb|CP007299.1|4246842-4250138 gi|749193065|gb|CP007027.1|4245894-4249190 gi|737516150|dbj|AP014573.1|4250111-4253407 gi|702068662|emb|HG813240.1|4247268-4250564 gi|690310687|gb|CP009480.1|4238923-4242219
CARD	Bla|SHV-56_1_EU586041|betalactams|Class_A_betalactamases|SHV	@phgb|EU586041|0-861|ARO:3001112|SHV-56 [Klebsiella pneumoniae]
Lahey	Bla|SHV-56_1_EU586041|betalactams|Class_A_betalactamases|SHV	ACB73258.1 EU586041.1:1-861
NCBI	Bla|SHV-56_1_EU586041|betalactams|Class_A_betalactamases|SHV	gi|177667053|gb|EU586041.1|1-861
Resfinder	Bla|SHV-56_1_EU586041|betalactams|Class_A_betalactamases|SHV	blaSHV-56_1_EU586041
NCBI	Rif|AP009048.1|gene3341|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|2378445-2382473 gi|958627747|gb|CP013253.1|3822008-3817980 gi|939732440|gb|CP011343.2|4161887-4165915 gi|939731527|gb|CP011342.2|4162776-4166804 gi|937526251|gb|CP012870.1|460410-456382 gi|937521852|gb|CP012869.1|460410-456382 gi|937517453|gb|CP012868.1|460410-456382 gi|923416119|gb|CP011113.1|4139308-4143336 gi|899729770|gb|CP012127.1|4155652-4159680 gi|899725419|gb|CP012126.1|4158487-4162515
ARG-ANNOT	669|AY220558.1|AY220558|Aminoglycosides|16S_rRNA_methyltransferases|ARMA	(AGly)ArmA:AY220558:1978-2751:774
CARD	669|AY220558.1|AY220558|Aminoglycosides|16S_rRNA_methyltransferases|ARMA	@phgb|NC_007682|17574-18348|ARO:3000858|armA [Escherichia coli];@phgb|GU437214.1|0-774|ARO:3000858|armA [Pseudomonas aeruginosa]
NCBI	669|AY220558.1|AY220558|Aminoglycosides|16S_rRNA_methyltransferases|ARMA	gi|984881271|gb|CP014215.1|2288019-2287246 gi|984881271|gb|CP014215.1|2300783-2300010 gi|974022331|gb|CP013924.1|1445714-1446487 gi|971497742|gb|CP012903.1|41216-41989 gi|971497538|gb|CP012902.1|53667-52894 gi|969995310|gb|KT317086.1|15008-15781 gi|969995276|gb|KT317085.1|27117-27890 gi|969995259|gb|KT317079.1|7795-8568 gi|969995242|gb|KT317078.1|9681-10454 gi|969995220|gb|KT317076.1|10656-11429 gi|969995200|gb|KT317075.1|12542-13315
Resfinder	669|AY220558.1|AY220558|Aminoglycosides|16S_rRNA_methyltransferases|ARMA	armA_1_AY220558
NCBI	ACou|NC_007795.3920057|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|974161314|gb|CP012018.1|1461278-1463269 gi|974158397|gb|CP012015.1|1462010-1464001 gi|974155539|gb|CP012013.1|1462922-1464913 gi|974152716|gb|CP012012.1|1454802-1456793 gi|974149849|gb|CP012011.1|1510756-1512747 gi|941146344|gb|CP007676.1|1356398-1358389 gi|941142962|gb|CP007672.1|1354612-1356603 gi|941139768|gb|CP007657.1|1368330-1370321 gi|899756207|gb|CP012119.1|537338-535347 gi|899750970|gb|CP012120.1|2435912-2433921
NCBI	gi|161016656|emb|AM849805.1|betalactams|Class_A_betalactamases|TEM	gi|695212971|ref|NG_036530.1|1-1123 gi|981191958|emb|LN999997.1|2513495-2513298 gi|975048878|gb|CP013962.1|4121893-4121696 gi|973715451|gb|CP013836.1|137555-137752 gi|973705327|gb|CP013832.1|75856-76053 gi|971339514|gb|CP006662.2|50617-50814 gi|943457735|gb|KT818627.1|32861-33058 gi|970338578|gb|KT725789.1|75254-75451 gi|970338460|gb|KT725788.1|80514-80711 gi|962148759|gb|KT002541.1|3702-3899
NCBI	gi|46370394|gb|AY589494.1|betalactams|Class_A_betalactamases|TEM	gi|46370394|gb|AY589494.1|1-1054
NCBI	Bla|SHV-1_8_GQ407137|betalactams|Class_A_betalactamases|SHV	gi|257043791|gb|GQ407137.1|1-861
Resfinder	Bla|SHV-1_8_GQ407137|betalactams|Class_A_betalactamases|SHV	blaSHV-1_8_GQ407137
NCBI	Bla|cepA_6_FR688022|betalactams|Class_A_betalactamases|CEPA	gi|307075856|emb|FR688022.1|1-903
Resfinder	Bla|cepA_6_FR688022|betalactams|Class_A_betalactamases|CEPA	cepA_6_FR688022
NCBI	Tet|tetW_2_AY049983|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	gi|604188329|gb|CP007519.1|911266-909347 gi|93569000|gb|AY049983.2|8309-10228 gi|212916524|gb|FJ409977.1|1-1804
Resfinder	Tet|tetW_2_AY049983|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	tet(W)_2_AY049983
ARG-ANNOT	Bla|SHV_142|JQQ029959|29-899|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-142:JQ029959:29-899:861
CARD	Bla|SHV_142|JQQ029959|29-899|861|betalactams|Class_A_betalactamases|SHV	@phgb|JQ029959|28-889|ARO:3001184|SHV-142 [Klebsiella pneumoniae]
Lahey	Bla|SHV_142|JQQ029959|29-899|861|betalactams|Class_A_betalactamases|SHV	AEX99752.1 JQ029959.1:29-889
NCBI	Bla|SHV_142|JQQ029959|29-899|861|betalactams|Class_A_betalactamases|SHV	gi|544280853|gb|KF211414.1|1151-2011 gi|372864060|gb|JQ029959.1|29-889
Resfinder	Bla|SHV_142|JQQ029959|29-899|861|betalactams|Class_A_betalactamases|SHV	blaSHV-142_1_JQ029959
CARD	CARD|phgb|AY590118|0-750|ARO:3003556|SLB-1|betalactams|Class_B_betalactamases|SLB	@phgb|AY590118|0-750|ARO:3003556|SLB-1 [Shewanella livingstonensis]
NCBI	CARD|phgb|AY590118|0-750|ARO:3003556|SLB-1|betalactams|Class_B_betalactamases|SLB	gi|50956653|gb|AY590118.1|1-750
CARD	CARD|phgb|AF028811|0-462|ARO:3002875|dfrE|Trimethoprim|Dihydrofolate_reductase|DFRE	@phgb|AF028811|0-462|ARO:3002875|dfrE [Enterococcus faecalis]
NCBI	CARD|phgb|AF028811|0-462|ARO:3002875|dfrE|Trimethoprim|Dihydrofolate_reductase|DFRE	gi|4103864|gb|AF028811.1|AF028811|1-463 gi|29350190|gb|AE016830.1|1529532-1529994
NCBI	ACou|NC_010400.5986295|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|169150821|emb|CU468230.2|3239540-3237657
NCBI	gi|22725666|gb|AF535127.1|betalactams|Class_A_betalactamases|TEM	gi|22725666|gb|AF535127.1|1-1069 gi|8117219|dbj|AB043582.1|3802-4116 gi|8117212|dbj|AB043581.1|3802-4116 gi|8117205|dbj|AB043580.1|3802-4116
ARG-ANNOT	1577|EU850412.1|EU850412|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-10:EU850412:2270-3166:897
CARD	1577|EU850412.1|EU850412|betalactams|Class_A_betalactamases|CARB	@phgb|EU850412|2269-3166|ARO:3002249|CARB-10 [Acinetobacter baumannii]
Lahey	1577|EU850412.1|EU850412|betalactams|Class_A_betalactamases|CARB	ACJ61335.1 EU850412.1:2270-3166
NCBI	1577|EU850412.1|EU850412|betalactams|Class_A_betalactamases|CARB	gi|214011134|gb|EU850412.1|2270-3166
Resfinder	1577|EU850412.1|EU850412|betalactams|Class_A_betalactamases|CARB	blaCARB-10_1_EU850412
CARD	CARD|phgb|Y10278|0-876|ARO:3001866|CTX-M-3|betalactams|Class_A_betalactamases|CTX	@phgb|Y10278|0-876|ARO:3001866|CTX-M-3 [Citrobacter freundii]
NCBI	CARD|phgb|Y10278|0-876|ARO:3001866|CTX-M-3|betalactams|Class_A_betalactamases|CTX	gi|953271687|gb|KT175891.1|137-1013 gi|930714478|gb|KR093975.1|153-1029 gi|930714476|gb|KR093974.1|183-1059 gi|923480230|gb|KP902666.1|203-1079 gi|800908771|gb|KP125893.1|130342-129466 gi|762041701|gb|KJ201887.1|9169-8293 gi|668347631|dbj|AB976577.1|1932-2808 gi|668347606|dbj|AB976571.1|1232-2108 gi|668347594|dbj|AB976568.1|1325-2201 gi|578355140|gb|KF914891.1|43942-43066
NCBI	gi|323709060|gb|HQ398214.1|betalactams|Class_A_betalactamases|CTX	gi|323709060|gb|HQ398214.1|1-1229 gi|971338783|gb|CP006659.2|2745071-2744871 gi|958102843|emb|LN824133.1|127563-127763 gi|958102843|emb|LN824133.1|1153883-1154083 gi|958102843|emb|LN824133.1|3347240-3347040 gi|828906158|gb|CP011578.1|655943-656143 gi|828906158|gb|CP011578.1|849699-849499
NCBI	gi|684933|gb|U20270.1|ECU20270|betalactams|Class_A_betalactamases|SHV	gi|684933|gb|U20270.1|ECU20270|125-1065
CARD	Bla|FJ666072.1|gene1|betalactams|Class_C_betalactamases|PDC	@phgb|FJ666072|0-1194|ARO:3002508|PDC-9 [Pseudomonas aeruginosa]
Lahey	Bla|FJ666072.1|gene1|betalactams|Class_C_betalactamases|PDC	ACQ82814.1 FJ666072.1:1-1194
NCBI	Bla|FJ666072.1|gene1|betalactams|Class_C_betalactamases|PDC	gi|229597533|gb|FJ666072.1|1-1194
CARD	Mdr|AP009048.1|gene3616|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTL	@phgb|U00096|3891614-3892790|ARO:3001215|mdtL [Escherichia coli str. K-12 substr. MG1655]
NCBI	Mdr|AP009048.1|gene3616|Multi-drug_resistance|Multi-drug_efflux_pumps|MDTL	gi|985000614|gb|CP014225.1|2088815-2089990 gi|958627747|gb|CP013253.1|4111137-4109962 gi|939732440|gb|CP011343.2|3872355-3873530 gi|939731527|gb|CP011342.2|3873415-3874590 gi|937526251|gb|CP012870.1|750040-748865 gi|937521852|gb|CP012869.1|750040-748865 gi|937517453|gb|CP012868.1|750040-748865 gi|932857508|emb|LN877770.1|4713937-4715112 gi|923416119|gb|CP011113.1|3848342-3849517 gi|899729770|gb|CP012127.1|3866023-3867198
CARD	Bla|IMP-10_1_AB195637|betalactams|Class_B_betalactamases|IMP	@phgb|AB074433|16-757|ARO:3002201|IMP-10 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-10_1_AB195637|betalactams|Class_B_betalactamases|IMP	BAB72069.1 AB074433.1:17-757
NCBI	Bla|IMP-10_1_AB195637|betalactams|Class_B_betalactamases|IMP	gi|772402180|gb|KP177455.1|444-1184 gi|575771412|dbj|AB901046.1|97-837 gi|575771406|dbj|AB901044.1|69-809 gi|575771387|dbj|AB901039.1|72-812 gi|575771377|dbj|AB901037.1|64-804 gi|82754992|gb|DQ288156.1|995-1735 gi|57158242|dbj|AB195637.1|1-741 gi|695208228|ref|NG_035500.1|17-757
Resfinder	Bla|IMP-10_1_AB195637|betalactams|Class_B_betalactamases|IMP	blaIMP-10_1_AB195637
ARG-ANNOT	Bla|OXA-27|AF201828|116-937|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-27:AF201828:116-937:822
CARD	Bla|OXA-27|AF201828|116-937|822|betalactams|Class_D_betalactamases|OXA	@phgb|AF201828|0-822|ARO:3001422|OXA-27 [Acinetobacter baumannii]
Lahey	Bla|OXA-27|AF201828|116-937|822|betalactams|Class_D_betalactamases|OXA	AAG35609.2 AF201828.2:116-937
NCBI	Bla|OXA-27|AF201828|116-937|822|betalactams|Class_D_betalactamases|OXA	gi|12060144|gb|AF201828.2|AF201828|116-937
Resfinder	Bla|OXA-27|AF201828|116-937|822|betalactams|Class_D_betalactamases|OXA	blaOXA-27_1_AF201828
CARD	CARD|phgb|HE999704|886122-886467|ARO:3000251|msrA|MLS|Macrolide_resistance_efflux_pumps|MSRA	@phgb|HE999704|886122-886467|ARO:3000251|msrA [Listeria monocytogenes]
NCBI	CARD|phgb|HE999704|886122-886467|ARO:3000251|msrA|MLS|Macrolide_resistance_efflux_pumps|MSRA	gi|441472679|emb|HE999705.1|885913-886258 gi|441469547|emb|HE999704.1|886123-886468
ARG-ANNOT	Bla|TEM-162|EF468463|67-927|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-162:EF468463:67-927:861
CARD	Bla|TEM-162|EF468463|67-927|861|betalactams|Class_A_betalactamases|TEM	@phgb|EF468463|66-927|ARO:3001028|TEM-162 [Acinetobacter haemolyticus]
Lahey	Bla|TEM-162|EF468463|67-927|861|betalactams|Class_A_betalactamases|TEM	ABO64442.1 EF468463.1:67-927
NCBI	Bla|TEM-162|EF468463|67-927|861|betalactams|Class_A_betalactamases|TEM	gi|134154076|gb|EF468463.1|67-927
Resfinder	Bla|TEM-162|EF468463|67-927|861|betalactams|Class_A_betalactamases|TEM	blaTEM-162_1_EF468463
NCBI	Tet|EU434751.1|gene2|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETW	gi|168259000|gb|EU434751.1|642-2578
NCBI	Gly|VanX-D_2_AF175293|Glycopeptides|VanD-type_resistance_protein|VANXD	gi|5759260|gb|AF175293.1|AF175293|5116-5724
Resfinder	Gly|VanX-D_2_AF175293|Glycopeptides|VanD-type_resistance_protein|VANXD	VanX-D_2_AF175293
CARD	CARD|phgb|AY487229|2152-2893|ARO:3000602|Erm39|MLS|23S_rRNA_methyltransferases|ERM	@phgb|AY487229|2152-2893|ARO:3000602|Erm(39) [Mycobacterium fortuitum]
NCBI	CARD|phgb|AY487229|2152-2893|ARO:3000602|Erm39|MLS|23S_rRNA_methyltransferases|ERM	gi|725869003|gb|CP009914.1|1808175-1807434 gi|40807664|gb|AY487229.1|2153-2894
ARG-ANNOT	AGly|RmtBAB103506|1410-2165|756|Aminoglycosides|16S_rRNA_methyltransferases|RMTB	(AGly)RmtB:AB103506:1410-2165:756
CARD	AGly|RmtBAB103506|1410-2165|756|Aminoglycosides|16S_rRNA_methyltransferases|RMTB	@phgb|NC_010558|116479-117235|ARO:3000860|rmtB [Escherichia coli]
NCBI	AGly|RmtBAB103506|1410-2165|756|Aminoglycosides|16S_rRNA_methyltransferases|RMTB	gi|970338578|gb|KT725789.1|76492-77247 gi|970338460|gb|KT725788.1|81752-82507 gi|962148759|gb|KT002541.1|4940-5695 gi|961666360|gb|KT185451.1|16705-15950 gi|961494526|gb|KT282968.1|32464-33219 gi|954665559|gb|KT879914.1|12019-12774 gi|873464120|gb|KR259134.1|980-1735 gi|873464075|gb|KR259132.1|2759-3514 gi|873464057|gb|KR259131.1|2843-3598 gi|873464024|gb|KR259130.1|2596-3351
Resfinder	AGly|RmtBAB103506|1410-2165|756|Aminoglycosides|16S_rRNA_methyltransferases|RMTB	rmtB_1_AB103506
NCBI	AGly|AF355189.1|gene2|2|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|18958399|gb|AF355189.1|1891-2439
CARD	CARD|pvgb|CP000647|4764664-4765849|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP000647|4764664-4765849|ARO:3001312|elfamycin resistant EF-Tu [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
NCBI	CARD|pvgb|CP000647|4764664-4765849|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|719628246|gb|CP009461.1|4638033-4636848 gi|150953431|gb|CP000647.1|4764665-4765850
ARG-ANNOT	gi|389620063|gb|JQ926986.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-144:JQ926986:1-861:861
CARD	gi|389620063|gb|JQ926986.1|betalactams|Class_A_betalactamases|SHV	@phgb|JQ926986|0-861|ARO:3001345|SHV-144 [Klebsiella pneumoniae]
Lahey	gi|389620063|gb|JQ926986.1|betalactams|Class_A_betalactamases|SHV	AFK93491.1 JQ926986.1:1-861
NCBI	gi|389620063|gb|JQ926986.1|betalactams|Class_A_betalactamases|SHV	gi|389620063|gb|JQ926986.1|1-861
Resfinder	gi|389620063|gb|JQ926986.1|betalactams|Class_A_betalactamases|SHV	blaSHV-144_1_JQ926986
ARG-ANNOT	Bla|OKP-A-11|AM850915|20-880|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-A-11:AM850915:20-880:861
CARD	Bla|OKP-A-11|AM850915|20-880|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM850915|19-880|ARO:3002428|OKP-A-11 [Klebsiella pneumoniae]
NCBI	Bla|OKP-A-11|AM850915|20-880|861|betalactams|Class_A_betalactamases|OKP	gi|197724702|emb|AM850915.2|20-880
Resfinder	Bla|OKP-A-11|AM850915|20-880|861|betalactams|Class_A_betalactamases|OKP	blaOKP-A-11_1_AM850915
NCBI	gi|392295711|gb|JQ422053.1|betalactams|Class_D_betalactamases|OXA	gi|392295711|gb|JQ422053.1|1-948
NCBI	Bla|AY077487.2|gene1|betalactams|Class_A_betalactamases|OXY	gi|32130556|gb|AY077487.2|118-1049
NCBI	ACou|CP001581.1|gene3049|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|226840737|gb|CP001581.1|3147208-3145253
NCBI	ACou|AF235050.4|gene33|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|gyrB|RequiresSNPConfirmation	gi|347516628|gb|AF235050.4|35917-37950
ARG-ANNOT	Phe|Dha1|BA000018|2517801-2518988|1188|Phenicol|Phenicol_efflux_pumps|dha	(Phe)Dha1:BA000018:2517801-2518988:1188
NCBI	Phe|Dha1|BA000018|2517801-2518988|1188|Phenicol|Phenicol_efflux_pumps|dha	gi|984671414|emb|LT009690.1|2542797-2541610 gi|974697948|dbj|AP017320.1|2573663-2572476 gi|927048389|gb|CP010890.1|2495939-2494752 gi|925190036|gb|CP012593.1|2511129-2509942 gi|803444476|gb|CP011147.1|2564212-2563025 gi|760495145|gb|CP010944.1|2379549-2378362 gi|760491253|gb|CP010943.1|2385110-2383923 gi|748807120|gb|CP010526.1|2568441-2567254 gi|595636499|gb|CP007454.1|1403726-1404913 gi|408436493|emb|HE579073.1|2468756-2467569
CARD	Phe|X82455.1|gene1|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	@phgb|X82455|33-666|ARO:3002670|cat [Morganella morganii]
NCBI	Phe|X82455.1|gene1|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|628946046|gb|KJ488989.1|686-1318 gi|335356369|gb|HQ386837.1|764-1396 gi|335356349|gb|HQ386834.1|764-1396 gi|330885977|gb|HQ880271.1|698-1330 gi|294622870|gb|GU906253.1|615-1247 gi|1638839|emb|X82455.1|34-666 gi|73621264|gb|DQ141319.1|686-1318
ARG-ANNOT	Bla|IND-2c|GU186042|57-788|732|betalactams|Class_B_betalactamases|IND	(Bla)IND-2c:GU186042::57-788:732
NCBI	Bla|IND-2c|GU186042|57-788|732|betalactams|Class_B_betalactamases|IND	gi|270266455|gb|GU186042.1|57-788
Resfinder	Bla|IND-2c|GU186042|57-788|732|betalactams|Class_B_betalactamases|IND	blaIND-2c_1_GU186042
Resfinder	Fos|fosA_2_AGDM01000012|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_2_AGDM01000012
NCBI	Elf|NC_002952.2860408|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|703576232|gb|CP009554.1|548530-549714 gi|701162461|emb|LN626917.1|548602-549786 gi|685631213|gb|CP009361.1|554904-556088 gi|532126991|gb|CP002388.1|494797-495981 gi|312436391|gb|CP002110.1|2762155-2760971 gi|49240382|emb|BX571856.1|602001-603185
NCBI	Bla|NC_010063.5774822|betalactams|Class_A_betalactamases|BLAZ	gi|899756175|gb|CP012118.1|11212-12057 gi|899750899|gb|CP012121.1|49703-48858 gi|584465780|gb|CP007177.1|8789-7944 gi|304384149|gb|CP002139.1|8558-7713 gi|304386437|gb|CP002143.1|8560-7715 gi|304384496|gb|CP002141.1|8557-7712 gi|304381946|gb|CP002135.1|8558-7713 gi|304381909|gb|CP002134.1|8558-7713 gi|304380339|gb|CP002132.1|8559-7714 gi|260066114|gb|GQ900412.1|13653-14498
CARD	Mdr|NC_011035.1.6447745|Multi-drug_resistance|MDR_regulator|MTRR	@phgb|NC_011035|1332866-1333499|ARO:3000817|mtrR [Neisseria gonorrhoeae NCCP11945]
NCBI	Mdr|NC_011035.1.6447745|Multi-drug_resistance|MDR_regulator|MTRR	gi|308445249|gb|HM467708.1|1-633 gi|193932879|gb|CP001050.1|1332867-1333499 gi|438190|emb|Z25796.1|1064-1696 gi|429489574|gb|JX887798.1|1-612
CARD	Phe|X02872.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|X02872|207-855|ARO:3002670|cat [Staphylococcus aureus]
NCBI	Phe|X02872.1|gene2|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|695196508|ref|NG_034436.1|208-855
CARD	gi|698174211|gb|KM087860.1|betalactams|Class_C_betalactamases|MIR	@phgb|KM087860|0-1146|ARO:3002174|MIR-9 [Enterobacter asburiae]
Lahey	gi|698174211|gb|KM087860.1|betalactams|Class_C_betalactamases|MIR	AIT76113.1 KM087860.1:1-1146
NCBI	gi|698174211|gb|KM087860.1|betalactams|Class_C_betalactamases|MIR	gi|698174211|gb|KM087860.1|1-1146
ARG-ANNOT	Bla|CTX-M-71|FJ815436|196-1071|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-71:FJ815436:196-1071:876
CARD	Bla|CTX-M-71|FJ815436|196-1071|876|betalactams|Class_A_betalactamases|CTX	@phgb|FJ815436|195-1071|ARO:3001932|CTX-M-71 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-71|FJ815436|196-1071|876|betalactams|Class_A_betalactamases|CTX	ACV92002.1 FJ815436.1:196-1071
NCBI	Bla|CTX-M-71|FJ815436|196-1071|876|betalactams|Class_A_betalactamases|CTX	gi|695214521|ref|NG_036820.1|196-1071
Resfinder	Bla|CTX-M-71|FJ815436|196-1071|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-71_1_FJ815436
NCBI	Tet|tetM_5_U58985|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|1470075|gb|U58985.1|GVU58985|228-2147
Resfinder	Tet|tetM_5_U58985|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_5_U58985
NCBI	Sul|sul2_7_HM486907|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	gi|306485939|gb|HM486907.1|1663-2514 gi|229904977|gb|FJ670543.1|3981-3130 gi|975007785|gb|CP010832.1|3652-3615 gi|954666075|gb|KT962845.1|18735-18698 gi|971339514|gb|CP006662.2|54069-54032 gi|943457735|gb|KT818627.1|109771-109734
Resfinder	Sul|sul2_7_HM486907|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULII	sul2_7_HM486907
NCBI	Rif|CP001581.1|gene3846|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|226840737|gb|CP001581.1|3987960-3984262
NCBI	Flq|AM180355.1|gene6|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|777202877|emb|LN831030.1|9003-6577 gi|760237048|gb|CP010905.1|6066-8492 gi|733567460|emb|LN614756.1|6066-8492 gi|115249003|emb|AM180355.1|6066-8492
NCBI	Sul|NC_010410.6003232|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|939559781|gb|CP012952.1|947948-948799 gi|751410783|gb|CP010781.1|3063963-3063112 gi|213985689|gb|CP001172.1|855500-856351 gi|213054530|gb|CP001182.1|3203718-3202867 gi|169147133|emb|CU459141.1|853404-854255
ARG-ANNOT	AGly|Aac6-Iaa|NC_003197|1707358-1707795|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iaa:NC_003197:1707358-1707795:438
CARD	AGly|Aac6-Iaa|NC_003197|1707358-1707795|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|NC_003197|1707357-1707795|ARO:3002571|AAC(6')-Iaa [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	AGly|Aac6-Iaa|NC_003197|1707358-1707795|438|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|981191958|emb|LN999997.1|3715454-3715017 gi|973795115|gb|AE006468.2|1707352-1707789 gi|928084184|gb|CP012681.1|1700834-1701271 gi|914821781|gb|CP012344.1|2294684-2294247 gi|821161554|gb|CP011428.1|1698865-1699302 gi|808186398|gb|CP007523.1|2439530-2439967 gi|777177758|emb|LN829401.1|1265618-1265181 gi|764057510|gb|CP007235.1|2438615-2439052 gi|674281104|gb|CP009102.1|1633440-1633877 gi|661245796|dbj|AP014565.1|1832260-1832697
ARG-ANNOT	554|FN806789.1|FN806789|MLS|23S_rRNA_methyltransferases|ERMB	(MLS)ErmB:M11180:714-1451:738
NCBI	554|FN806789.1|FN806789|MLS|23S_rRNA_methyltransferases|ERMB	gi|939198276|gb|CP010063.1|734913-735650 gi|927039354|gb|CP012648.1|1735679-1736416 gi|733165395|emb|HG799494.1|44059-44796 gi|674112297|gb|CP007572.1|1865570-1864833 gi|674107077|gb|CP007570.1|1884908-1884171 gi|670938612|gb|CP006630.1|2677975-2677238 gi|649571894|emb|HG799501.1|14776-15513 gi|649013680|gb|CP008698.1|2946734-2945997 gi|641688293|emb|HG799495.1|57578-58315 gi|586640957|gb|KJ192337.1|15157-15894
Resfinder	554|FN806789.1|FN806789|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_10_U86375
ARG-ANNOT	Bla|OXA-15|U63835|128-955|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-15:U63835:128-955:828
CARD	Bla|OXA-15|U63835|128-955|828|betalactams|Class_D_betalactamases|OXA	@phgb|U63835|127-955|ARO:3001410|OXA-15 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-15|U63835|128-955|828|betalactams|Class_D_betalactamases|OXA	AAB05874.1 U63835.1:128-955
NCBI	Bla|OXA-15|U63835|128-955|828|betalactams|Class_D_betalactamases|OXA	gi|1488048|gb|U63835.1|PAU63835|128-955
Resfinder	Bla|OXA-15|U63835|128-955|828|betalactams|Class_D_betalactamases|OXA	blaOXA-15_1_U63835
NCBI	Sul|AE000516.2|gene1302|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|984994143|gb|CP010340.1|1359436-1360392 gi|984989958|gb|CP010339.1|1353309-1354265 gi|984985728|gb|CP010338.1|1354369-1355325 gi|984976917|gb|CP010336.1|1349886-1350842 gi|984959134|gb|CP010332.1|1352775-1353731 gi|984950177|gb|CP010330.1|1352479-1353435 gi|984945858|gb|CP010329.1|1351054-1352010 gi|971171538|gb|CP013741.1|1354097-1355053 gi|927989386|gb|CP011455.1|1349665-1350621 gi|923105817|gb|CP012506.1|1342305-1343261
ARG-ANNOT	Bla|CARB-1|D86225|232-1098|867|betalactams|Class_A_betalactamases|CARB	(Bla)CARB-1:D86225:232-1098:867;(Bla)CARB-12:D13210:232-1098:867
CARD	Bla|CARB-1|D86225|232-1098|867|betalactams|Class_A_betalactamases|CARB	@phgb|D13210|231-1098|ARO:3002250|CARB-12 [Proteus mirabilis]
Lahey	Bla|CARB-1|D86225|232-1098|867|betalactams|Class_A_betalactamases|CARB	BAA02497.1 D13210.1:232-1098
NCBI	Bla|CARB-1|D86225|232-1098|867|betalactams|Class_A_betalactamases|CARB	gi|575771367|dbj|AB901035.1|2998-3864 gi|2821950|dbj|D86225.1|232-1098 gi|216842|dbj|D13210.1|PRMPBLAP|232-1098
Resfinder	Bla|CARB-1|D86225|232-1098|867|betalactams|Class_A_betalactamases|CARB	blaCARB-12_1_D13210
ARG-ANNOT	Bla|SHV-62|AJ866285|1-832|832|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-62:AJ866285:1-832:832
CARD	Bla|SHV-62|AJ866285|1-832|832|betalactams|Class_A_betalactamases|SHV	@phgb|AJ866285|0-861|ARO:3001117|SHV-62 [Klebsiella pneumoniae]
Lahey	Bla|SHV-62|AJ866285|1-832|832|betalactams|Class_A_betalactamases|SHV	CAI30651.2 AJ866285.2:1-861
NCBI	Bla|SHV-62|AJ866285|1-832|832|betalactams|Class_A_betalactamases|SHV	gi|160858187|emb|AJ866285.2|1-837
Resfinder	Bla|SHV-62|AJ866285|1-832|832|betalactams|Class_A_betalactamases|SHV	blaSHV-62_1_AJ866285
NCBI	gi|13310176|gb|AF329699.1|betalactams|Class_A_betalactamases|GES	gi|13310176|gb|AF329699.1|1-1410
ARG-ANNOT	463|AF321608.1|AF321608|betalactams|Class_A_betalactamases|CTX	(Bla)SED-1:AF321608:1-888:888
CARD	463|AF321608.1|AF321608|betalactams|Class_A_betalactamases|CTX	@phgb|AF321608|0-888|ARO:3003561|Sed1 beta-lactamase [Citrobacter sedlakii]
NCBI	463|AF321608.1|AF321608|betalactams|Class_A_betalactamases|CTX	gi|14486652|gb|AF321608.1|AF321608|1-888
Resfinder	463|AF321608.1|AF321608|betalactams|Class_A_betalactamases|CTX	blaSED1_1_AF321608
NCBI	Bla|HE993884.1|gene8|betalactams|Class_A_betalactamases|BLAZ	gi|413915517|emb|HE993884.1|11937-11086
ARG-ANNOT	gi|157285906|gb|EF650036.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-110:EF650036:1-825:825
CARD	gi|157285906|gb|EF650036.1|betalactams|Class_D_betalactamases|OXA	@phgb|EF650036|0-825|ARO:3001641|OXA-110 [Acinetobacter baumannii]
Lahey	gi|157285906|gb|EF650036.1|betalactams|Class_D_betalactamases|OXA	ABV31690.1 EF650036.1:1-825
NCBI	gi|157285906|gb|EF650036.1|betalactams|Class_D_betalactamases|OXA	gi|157285906|gb|EF650036.1|1-825
Resfinder	gi|157285906|gb|EF650036.1|betalactams|Class_D_betalactamases|OXA	blaOXA-110_1_EF650036
ARG-ANNOT	1337|AJ416344.1|AJ416344|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-20:AJ416344:304-1179:876
CARD	1337|AJ416344.1|AJ416344|betalactams|Class_A_betalactamases|CTX	@phgb|AJ416344|303-1179|ARO:3001882|CTX-M-20 [Proteus mirabilis]
Lahey	1337|AJ416344.1|AJ416344|betalactams|Class_A_betalactamases|CTX	CAC95175.1 AJ416344.1:304-1179
NCBI	1337|AJ416344.1|AJ416344|betalactams|Class_A_betalactamases|CTX	gi|16304823|emb|AJ416344.1|304-1179
Resfinder	1337|AJ416344.1|AJ416344|betalactams|Class_A_betalactamases|CTX	blaCTX-M-20_1_AJ416344
ARG-ANNOT	Bla|LEN-25|HQ709169|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-25:HQ709169:1-861:861
NCBI	Bla|LEN-25|HQ709169|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|321173611|gb|HQ709169.1|1-861
Resfinder	Bla|LEN-25|HQ709169|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN25_1_HQ709169
NCBI	Bla|PAO_4_AY083592|betalactams|Class_C_betalactamases|PDC	gi|20135559|gb|AY083592.1|45-1238
Resfinder	Bla|PAO_4_AY083592|betalactams|Class_C_betalactamases|PDC	blaPAO_4_AY083592
NCBI	MLS|ermB_1_JN899585|MLS|23S_rRNA_methyltransferases|ERMB	gi|970338797|gb|KT962975.1|2951-3688 gi|920768663|gb|CP011419.1|1940585-1939848 gi|749389159|gb|KJ645709.1|25732-24995 gi|663450304|gb|KC876752.1|5178-5915 gi|663450289|gb|KC876751.1|5181-5918 gi|663450275|gb|KC876750.1|4592-5329 gi|663450246|gb|KC876748.1|4592-5329 gi|510787448|gb|KC575115.1|8506-9243 gi|459385823|gb|CP003922.1|716338-715601 gi|383850662|gb|JN899585.1|275-1012
Resfinder	MLS|ermB_1_JN899585|MLS|23S_rRNA_methyltransferases|ERMB	erm(B)_1_JN899585
ARG-ANNOT	Bla|ACT-2|AM076977|1-1146|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-2:AM076977:1-1146:1146
CARD	Bla|ACT-2|AM076977|1-1146|1146|betalactams|Class_C_betalactamases|ACT	@phgb|AM076977|0-1146|ARO:3001822|ACT-2 [Enterobacter asburiae]
Lahey	Bla|ACT-2|AM076977|1-1146|1146|betalactams|Class_C_betalactamases|ACT	CAJ28994.1 AM076977.1:1-1146
NCBI	Bla|ACT-2|AM076977|1-1146|1146|betalactams|Class_C_betalactamases|ACT	gi|113207875|emb|AM076977.1|1-1146 gi|666667513|gb|KJ949092.1|1-1143
Resfinder	Bla|ACT-2|AM076977|1-1146|1146|betalactams|Class_C_betalactamases|ACT	blaACT-2_1_AM076977
CARD	Bla|AL513383.1|gene195|betalactams|Class_A_betalactamases|TEM	@phgb|AL513383|161910-162771|ARO:3000873|TEM-1 [Salmonella enterica subsp. enterica serovar Typhi str. CT18]
NCBI	Bla|AL513383.1|gene195|betalactams|Class_A_betalactamases|TEM	gi|817373828|gb|KP398867.1|27242-28102 gi|365803989|gb|CP003225.1|29746-30606 gi|365803989|gb|CP003225.1|49820-50680 gi|365803828|gb|CP003224.1|41723-42583 gi|284433120|gb|GU256641.1|63114-62254 gi|284433120|gb|GU256641.1|76950-76090 gi|124054002|gb|EF035607.1|1-861 gi|16505740|emb|AL513383.1|161911-162771 gi|12044259|gb|AF309824.1|AF309824|119-979
NCBI	Sul|CP000034.1|gene3358|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|81239530|gb|CP000034.1|3116361-3115468
CARD	CARD|phgb|AB302939|8-869|ARO:3001115|SHV-60|betalactams|Class_A_betalactamases|SHV	@phgb|AB302939|8-869|ARO:3001115|SHV-60 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AB302939|8-869|ARO:3001115|SHV-60|betalactams|Class_A_betalactamases|SHV	gi|159576919|dbj|AB302939.1|9-870 gi|160858183|emb|AJ866283.2|1-861
ARG-ANNOT	Bla|LEN-14|AY265889|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-14:AY265889:1-861:861
NCBI	Bla|LEN-14|AY265889|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|46244165|gb|AY265889.1|1-460
CARD	CARD|phgb|JF268688|5407-6232|ARO:3001809|OXA-209|betalactams|Class_D_betalactamases|OXA	@phgb|JF268688|5407-6232|ARO:3001809|OXA-209 [Riemerella anatipestifer]
NCBI	CARD|phgb|JF268688|5407-6232|ARO:3001809|OXA-209|betalactams|Class_D_betalactamases|OXA	gi|343916452|gb|JF268688.1|5408-6233
NCBI	Flq|CR628337.1|gene3018|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|53752796|emb|CR628337.1|3321661-3319406
ARG-ANNOT	Bla|CMY-71|JQ711184|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-71:JQ711184:1027-2172:1146
CARD	Bla|CMY-71|JQ711184|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JQ711184|1026-2172|ARO:3002084|CMY-71 [Citrobacter freundii]
Lahey	Bla|CMY-71|JQ711184|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	AFK08538.1 JQ711184.1:1027-2172
NCBI	Bla|CMY-71|JQ711184|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	gi|858970176|gb|KM985464.1|1-1146 gi|387861048|gb|JQ711184.1|1027-2172
Resfinder	Bla|CMY-71|JQ711184|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-71_1_JQ711184
CARD	Flq|QnrB11_1_EU136183|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EU136183|0-681|ARO:3002731|QnrB16 [Citrobacter freundii]
NCBI	Flq|QnrB11_1_EU136183|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|157695004|gb|EU136183.1|1-681
Resfinder	Flq|QnrB11_1_EU136183|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB11_1_EU136183
ARG-ANNOT	AGly|Aph3-Va|U24442|680-1456|780|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-Va:U24442:680-1456:780
NCBI	AGly|Aph3-Va|U24442|680-1456|780|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|1421723|gb|U24442.1|SRU24442|680-1456
ARG-ANNOT	gi|451810087|dbj|AB744718.1|betalactams|Class_B_betalactamases|NDM	(Bla)NDM-8:AB744718:1-813:813
CARD	gi|451810087|dbj|AB744718.1|betalactams|Class_B_betalactamases|NDM	@phgb|AB744718|0-813|ARO:3002358|NDM-8 [Escherichia coli]
Lahey	gi|451810087|dbj|AB744718.1|betalactams|Class_B_betalactamases|NDM	BAM84089.1 AB744718.1:1-813
NCBI	gi|451810087|dbj|AB744718.1|betalactams|Class_B_betalactamases|NDM	gi|695214845|ref|NG_036906.1|1-813
Resfinder	gi|451810087|dbj|AB744718.1|betalactams|Class_B_betalactamases|NDM	blaNDM-8_1_AB744718
CARD	gi|397133430|gb|JQ396378.1|betalactams|Class_D_betalactamases|OXA	@phgb|JQ396378|0-747|ARO:3001476|OXA-184 [Campylobacter jejuni]
Lahey	gi|397133430|gb|JQ396378.1|betalactams|Class_D_betalactamases|OXA	AFO09968.1 JQ396378.1:1-747
NCBI	gi|397133430|gb|JQ396378.1|betalactams|Class_D_betalactamases|OXA	gi|397133430|gb|JQ396378.1|1-747
NCBI	Bla|NC_010481.6155789|betalactams|Class_D_betalactamases|OXA	gi|971493847|gb|CP010351.1|396906-395992 gi|971493847|gb|CP010351.1|395910-395964 gi|827342761|gb|KR055667.1|2553-3467 gi|827342761|gb|KR055667.1|3549-3495 gi|442769248|gb|JX101647.1|57483-56569 gi|442769248|gb|JX101647.1|56487-56541 gi|544205277|gb|KF208466.1|1598-2512 gi|544205277|gb|KF208466.1|2594-2540 gi|522376232|gb|CP003848.1|47906-48820 gi|522376232|gb|CP003848.1|48902-48848 gi|441494717|gb|JX968506.1|1575-661 gi|441494717|gb|JX968506.1|579-633 gi|695226605|ref|NG_041543.1|1484-2398 gi|695226605|ref|NG_041543.1|2480-2426 gi|695226596|ref|NG_041542.1|3628-4542 gi|695226596|ref|NG_041542.1|4624-4570 gi|695226589|ref|NG_041541.1|1905-2819 gi|695226589|ref|NG_041541.1|2901-2847 gi|695226580|ref|NG_041540.1|3606-4520 gi|695226580|ref|NG_041540.1|4602-4548
ARG-ANNOT	Bla|A|CP003048|1-885|885|betalactams|Class_A_betalactamases|BLAA	(Bla)BlaA:CP003048:1-885:885
NCBI	Bla|A|CP003048|1-885|885|betalactams|Class_A_betalactamases|BLAA	gi|916363017|gb|CP012372.1|699026-698142 gi|913035616|gb|CP012037.1|1845109-1845993 gi|822669647|gb|CP009753.1|1106027-1106911 gi|820871666|gb|CP010446.2|699046-698162 gi|754282044|gb|CP010290.1|115848-116732 gi|754275258|gb|CP010287.1|454959-454075 gi|754273241|gb|CP010115.1|1513786-1512902 gi|377828067|gb|CP003048.1|775069-774185 gi|377826522|gb|CP003049.1|699162-698278 gi|282158286|gb|CP001633.1|699219-698335
NCBI	Flq|CP003583.1|gene1174|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|388532432|gb|CP003583.1|1132335-1134785 gi|378937014|gb|CP003351.1|1199896-1197446
NCBI	ACou|NC_009725.1.5460263|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|556017688|gb|CP006845.1|1838965-1840932 gi|154350369|gb|CP000560.1|1843604-1845571
ARG-ANNOT	996|AY884051.1|AY884051|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3-PRIME	(AGly)Aac3-If:AY884051:61-525:468
NCBI	996|AY884051.1|AY884051|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3-PRIME	gi|60265759|gb|AY884051.1|61-525
Resfinder	996|AY884051.1|AY884051|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC3-PRIME	aac(3)-If_1_AY884051
CARD	Bla|OXA-349_1_KF297578|betalactams|Class_D_betalactamases|OXA	@phgb|KF297578|0-822|ARO:3001536|OXA-349 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-349_1_KF297578|betalactams|Class_D_betalactamases|OXA	AGW83447.1 KF297578.1:1-822
NCBI	Bla|OXA-349_1_KF297578|betalactams|Class_D_betalactamases|OXA	gi|546237209|gb|KF297578.1|1-822
Resfinder	Bla|OXA-349_1_KF297578|betalactams|Class_D_betalactamases|OXA	blaOXA-349_1_KF297578
CARD	1605|LC012596.1|LC012596|betalactams|Class_B_betalactamases|NDM	@phgb|LC012596|3585-4398|ARO:3003182|NDM-13 [Escherichia coli]
Lahey	1605|LC012596.1|LC012596|betalactams|Class_B_betalactamases|NDM	BAQ02518.1 LC012596.1:3586-4398
NCBI	1605|LC012596.1|LC012596|betalactams|Class_B_betalactamases|NDM	gi|734511560|dbj|LC012596.1|3586-4398
Resfinder	1605|LC012596.1|LC012596|betalactams|Class_B_betalactamases|NDM	blaNDM-13_1_LC012596
CARD	1452|M22614.1|R26CML|Phenicol|Phenicol_efflux_pumps|CML	@phgb|M22614|426-1335|ARO:3002690|cml [Plasmid R26]
NCBI	1452|M22614.1|R26CML|Phenicol|Phenicol_efflux_pumps|CML	gi|151802|gb|M22614.1|R26CML|427-1335
Resfinder	1452|M22614.1|R26CML|Phenicol|Phenicol_efflux_pumps|CML	cml_1_M22614
NCBI	gi|407731514|gb|JX440350.1|betalactams|Class_C_betalactamases|CMY	gi|407731514|gb|JX440350.1|1027-2255
CARD	CARD|phgb|KC202804|3874-4531|ARO:3002803|QnrVC6|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	@phgb|KC202804|3874-4531|ARO:3002803|QnrVC6 [Vibrio parahaemolyticus]
NCBI	CARD|phgb|KC202804|3874-4531|ARO:3002803|QnrVC6|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRVC	gi|974751547|gb|KU130294.1|244306-243649 gi|695227256|ref|NG_041633.1|3875-4532 gi|525330062|gb|KF263655.1|218-875 gi|295002629|gb|GU944730.1|920-1577
ARG-ANNOT	Phe|Cmr|U85507|3518-4693|1172|Phenicol|Phenicol_efflux_pumps|CMXAB	(Phe)Cmr:U85507:3518-4693:1172
NCBI	Phe|Cmr|U85507|3518-4693|1172|Phenicol|Phenicol_efflux_pumps|CMXAB	gi|1835592|gb|U85507.1|CGU85507|3518-4693
Resfinder	Phe|Cmr|U85507|3518-4693|1172|Phenicol|Phenicol_efflux_pumps|CMXAB	cmx_1_U85507
ARG-ANNOT	Bla|CTX-M-29|AY267213|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-29:AY267213:1-876:876
CARD	Bla|CTX-M-29|AY267213|1-876|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY267213|0-876|ARO:3001891|CTX-M-29 [Escherichia coli]
Lahey	Bla|CTX-M-29|AY267213|1-876|876|betalactams|Class_A_betalactamases|CTX	AAP22736.1 AY267213.1:1-876
NCBI	Bla|CTX-M-29|AY267213|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|30351066|gb|AY267213.1|1-876
Resfinder	Bla|CTX-M-29|AY267213|1-876|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-29_1_AY267213
ARG-ANNOT	Bla|TEM-176|GU550123|145-1005|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-176:GU550123:145-1005:861
CARD	Bla|TEM-176|GU550123|145-1005|861|betalactams|Class_A_betalactamases|TEM	@phgb|GU550123|144-1005|ARO:3001041|TEM-176 [Escherichia coli]
Lahey	Bla|TEM-176|GU550123|145-1005|861|betalactams|Class_A_betalactamases|TEM	ADB90239.1 GU550123.1:145-1005
NCBI	Bla|TEM-176|GU550123|145-1005|861|betalactams|Class_A_betalactamases|TEM	gi|284468331|gb|GU550123.1|145-1005
Resfinder	Bla|TEM-176|GU550123|145-1005|861|betalactams|Class_A_betalactamases|TEM	blaTEM-176_1_GU550123
ARG-ANNOT	gi|190360314|emb|AM279652.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-98:AM279652:1-825:825
CARD	gi|190360314|emb|AM279652.1|betalactams|Class_D_betalactamases|OXA	@phgb|AM279652|0-825|ARO:3001646|OXA-98 [Acinetobacter baumannii]
Lahey	gi|190360314|emb|AM279652.1|betalactams|Class_D_betalactamases|OXA	CAK50801.1 AM279652.1:1-825
NCBI	gi|190360314|emb|AM279652.1|betalactams|Class_D_betalactamases|OXA	gi|190360314|emb|AM279652.1|1-825
Resfinder	gi|190360314|emb|AM279652.1|betalactams|Class_D_betalactamases|OXA	blaOXA-98_1_AM279652
ARG-ANNOT	810|AB261016.1|AB261016|Aminoglycosides|16S_rRNA_methyltransferases|NPMA	(AGly)NpmA:AB261016:3069-3728:660
CARD	810|AB261016.1|AB261016|Aminoglycosides|16S_rRNA_methyltransferases|NPMA	@phgb|AB261016|3068-3728|ARO:3002665|npmA [Escherichia coli]
NCBI	810|AB261016.1|AB261016|Aminoglycosides|16S_rRNA_methyltransferases|NPMA	gi|695212902|ref|NG_036511.1|3069-3728
Resfinder	810|AB261016.1|AB261016|Aminoglycosides|16S_rRNA_methyltransferases|NPMA	npmA_1_AB261016
CARD	MLS|ermC_14_M12730|MLS|23S_rRNA_methyltransferases|ERMC	@phgb|M12730|779-1514|ARO:3000250|ErmC [Staphylococcus epidermidis]
NCBI	MLS|ermC_14_M12730|MLS|23S_rRNA_methyltransferases|ERMC	gi|150829|gb|M12730.1|PNECG|780-1514 gi|353127779|gb|JF968533.1|150-197
Resfinder	MLS|ermC_14_M12730|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_14_M12730
CARD	CARD|phgb|EU408352|35394-37224|ARO:3002484|LRA-13|betalactams|Class_B_betalactamases|LRA	@phgb|EU408352|35394-37224|ARO:3002484|LRA-13 [uncultured bacterium BLR13]
NCBI	CARD|phgb|EU408352|35394-37224|ARO:3002484|LRA-13|betalactams|Class_B_betalactamases|LRA	gi|169647641|gb|EU408352.1|35395-37225 gi|961560204|gb|CP013480.1|1897398-1897427 gi|734574563|gb|CP009974.1|5355627-5355598
ARG-ANNOT	Gly|VanH-Pt|DQ018710|5109-6077|969|Glycopeptides|VanA-type_resistance_protein|VANHA	(Gly)VanH-Pt:DQ018710:5109-6077:969
NCBI	Gly|VanH-Pt|DQ018710|5109-6077|969|Glycopeptides|VanA-type_resistance_protein|VANHA	gi|66731632|gb|DQ018710.1|5109-6077
Resfinder	Gly|VanH-Pt|DQ018710|5109-6077|969|Glycopeptides|VanA-type_resistance_protein|VANHA	VanH-Pt_3_DQ018710
ARG-ANNOT	Bla|NDM-2|JN112341|1-813|813|betalactams|Class_B_betalactamases|NDM	(Bla)NDM-2:JN112341:1-813:813
CARD	Bla|NDM-2|JN112341|1-813|813|betalactams|Class_B_betalactamases|NDM	@phgb|JF703135|0-813|ARO:3000590|NDM-2 [Acinetobacter baumannii]
Lahey	Bla|NDM-2|JN112341|1-813|813|betalactams|Class_B_betalactamases|NDM	AEA41876.1 JF703135.1:1-813
NCBI	Bla|NDM-2|JN112341|1-813|813|betalactams|Class_B_betalactamases|NDM	gi|374351485|gb|JN872328.1|5090-5902 gi|357595124|gb|JN112341.1|2504-1692 gi|345447393|gb|JF821215.1|940-1752 gi|327244638|gb|JF703135.1|1-813
Resfinder	Bla|NDM-2|JN112341|1-813|813|betalactams|Class_B_betalactamases|NDM	blaNDM-2_1_JF703135
ARG-ANNOT	Bla|BEL-2|FJ666063|1-852|852|betalactams|Class_A_betalactamases|BEL	(Bla)BEL-2:FJ666063:1-852:852
CARD	Bla|BEL-2|FJ666063|1-852|852|betalactams|Class_A_betalactamases|BEL	@phgb|FJ666063|0-852|ARO:3002386|BEL-2 [Pseudomonas aeruginosa]
Lahey	Bla|BEL-2|FJ666063|1-852|852|betalactams|Class_A_betalactamases|BEL	ACV69996.1 FJ666063.1:1-852
NCBI	Bla|BEL-2|FJ666063|1-852|852|betalactams|Class_A_betalactamases|BEL	gi|257815404|gb|FJ666063.1|1-852
Resfinder	Bla|BEL-2|FJ666063|1-852|852|betalactams|Class_A_betalactamases|BEL	blaBEL-2_1_FJ666063
NCBI	AGly|AJ487033.2|gene1|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	gi|114421723|emb|AJ487033.2|107-640
CARD	CARD|phgb|EF219134|2125-3001|ARO:3001923|CTX-M-62|betalactams|Class_A_betalactamases|CTX	@phgb|EF219134|2125-3001|ARO:3001923|CTX-M-62 [Klebsiella pneumoniae]
NCBI	CARD|phgb|EF219134|2125-3001|ARO:3001923|CTX-M-62|betalactams|Class_A_betalactamases|CTX	gi|695216742|ref|NG_037697.1|2126-3002
ARG-ANNOT	Bla|SHV-152|JX121119|1-858|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-152:JX121119:1-858:858
CARD	Bla|SHV-152|JX121119|1-858|858|betalactams|Class_A_betalactamases|SHV	@phgb|JX121119|0-858|ARO:3001191|SHV-152 [Klebsiella pneumoniae]
Lahey	Bla|SHV-152|JX121119|1-858|858|betalactams|Class_A_betalactamases|SHV	AFQ23958.1 JX121119.1:1-858
NCBI	Bla|SHV-152|JX121119|1-858|858|betalactams|Class_A_betalactamases|SHV	gi|401871162|gb|JX121119.1|1-858
Resfinder	Bla|SHV-152|JX121119|1-858|858|betalactams|Class_A_betalactamases|SHV	blaSHV-152_1_JX121119
NCBI	Tet|tetB_5_AJ277653|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	gi|536186947|dbj|AB848355.1|3191-4396 gi|154845|gb|J01830.1|TRN10TETR|1608-2813 gi|14485027|gb|AF362081.1|AF362081|2339-3544 gi|8919959|emb|AJ277653.1|4551-5756 gi|5327029|emb|AJ247373.1|4486-5691 gi|43700|emb|V00611.1|61-1266
Resfinder	Tet|tetB_5_AJ277653|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETB	tet(B)_5_AJ277653
ARG-ANNOT	Gly|VanS-B|AY655721|731-2074|1344|Glycopeptides|VanB-type_regulator|VANSB	(Gly)VanS-B:AY655721:731-2074:1344
NCBI	Gly|VanS-B|AY655721|731-2074|1344|Glycopeptides|VanB-type_regulator|VANSB	gi|941949718|gb|CP013009.1|131299-129957 gi|577698893|gb|KF823968.1|976-2318 gi|378937014|gb|CP003351.1|2844531-2843189 gi|229463101|gb|FJ767776.1|976-2318 gi|80973263|gb|AY655721.2|731-2073 gi|80973252|gb|AY655720.2|731-2073 gi|80973242|gb|AY655718.2|731-2073 gi|11878534|gb|AF310956.2|AF310956|1133-2475 gi|33336058|gb|AF550668.1|2242-3579
NCBI	gi|146261808|gb|EF552405.1|betalactams|Class_D_betalactamases|OXA	gi|146261808|gb|EF552405.1|1-840
CARD	350|KF478993.1|KF478993|Glycopeptides|VanO-type_resistance_protein|VANXO	@phgb|KF478993|2576-3185|ARO:3002954|vanXO [Rhodococcus equi]
NCBI	350|KF478993.1|KF478993|Glycopeptides|VanO-type_resistance_protein|VANXO	gi|557879499|gb|KF478993.1|2577-3185
ARG-ANNOT	Bla|OXY6-2|AJ871875|1-873|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY6-2:AJ871875:1-873:873
CARD	Bla|OXY6-2|AJ871875|1-873|873|betalactams|Class_A_betalactamases|OXY	@phgb|AJ871875|0-873|ARO:3002414|OXY-6-2 [Klebsiella oxytoca]
NCBI	Bla|OXY6-2|AJ871875|1-873|873|betalactams|Class_A_betalactamases|OXY	gi|927662801|dbj|AP014951.1|1491810-1490938 gi|60416716|emb|AJ871875.1|1-873
Resfinder	Bla|OXY6-2|AJ871875|1-873|873|betalactams|Class_A_betalactamases|OXY	blaOXY-6-2_2_AJ871875
NCBI	Flq|QnrB6_3_EF523819|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|805300607|gb|KP339254.1|135-815 gi|686483900|gb|KM111270.1|3479-2799 gi|672605144|gb|CP009116.1|69546-70226 gi|347311572|gb|JF775514.1|8374-7694 gi|293628003|gb|GU723682.1|3366-2686 gi|293627996|gb|GU723680.1|3368-2688 gi|284019459|gb|GU295959.1|3405-2725 gi|226536677|gb|FJ851186.1|3397-2717 gi|197092208|gb|EU908090.1|6603-7283 gi|695213227|ref|NG_036578.1|3509-2829
Resfinder	Flq|QnrB6_3_EF523819|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB6_3_EF523819
NCBI	Met|nimE_1_AJ244018|Metronidazole|nim_nitroimidazole_reductase|NIME	gi|7327847|emb|AJ244018.1|1-458
Resfinder	Met|nimE_1_AJ244018|Metronidazole|nim_nitroimidazole_reductase|NIME	nimE_1_AJ244018
CARD	Bla|AF091113.2|gene1|betalactams|Class_A_betalactamases|TEM	@phgb|AF091113|450-1311|ARO:3000934|TEM-67 [Proteus mirabilis]
NCBI	Bla|AF091113.2|gene1|betalactams|Class_A_betalactamases|TEM	gi|695209086|ref|NG_035721.1|451-1312
ARG-ANNOT	Bla|NDM-6|JN967644|1-813|813|betalactams|Class_B_betalactamases|NDM	(Bla)NDM-6:JN967644:1-813:813
CARD	Bla|NDM-6|JN967644|1-813|813|betalactams|Class_B_betalactamases|NDM	@phgb|JN967644|0-813|ARO:3002356|NDM-6 [Escherichia coli]
Lahey	Bla|NDM-6|JN967644|1-813|813|betalactams|Class_B_betalactamases|NDM	AEX08599.1 JN967644.1:1-813
NCBI	Bla|NDM-6|JN967644|1-813|813|betalactams|Class_B_betalactamases|NDM	gi|529159776|gb|KC887916.1|216-1028 gi|695226456|ref|NG_041520.1|1-813
Resfinder	Bla|NDM-6|JN967644|1-813|813|betalactams|Class_B_betalactamases|NDM	blaNDM-6_1_JN967644
ARG-ANNOT	Bla|B-1|AF189298|1-750|750|betalactams|Class_B_betalactamases|BLAB	(Bla)B-1:AF189298:1-750:750
NCBI	Bla|B-1|AF189298|1-750|750|betalactams|Class_B_betalactamases|BLAB	gi|9587055|gb|AF189298.1|AF189298|1-750
ARG-ANNOT	Bla|CTX-M-50|AY847146|83-958|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-50:AY847146:83-958:876
CARD	Bla|CTX-M-50|AY847146|83-958|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY847146|82-958|ARO:3001912|CTX-M-50 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-50|AY847146|83-958|876|betalactams|Class_A_betalactamases|CTX	AAV97955.1 AY847146.1:83-958
NCBI	Bla|CTX-M-50|AY847146|83-958|876|betalactams|Class_A_betalactamases|CTX	gi|56554768|gb|AY847146.1|83-958
Resfinder	Bla|CTX-M-50|AY847146|83-958|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-50_1_AY847146
NCBI	Sul|NC_012491.1.7719839|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|226092535|dbj|AP008955.1|186149-186991
CARD	CARD|phgb|NC_012547|21239-21638|ARO:3001205|bleomycin|Glycopeptides|Bleomycin_resistance_protein|BRP	@phgb|NC_012547|21239-21638|ARO:3001205|bleomycin resistance protein (BRP) [Staphylococcus aureus]
NCBI	CARD|phgb|NC_012547|21239-21638|ARO:3001205|bleomycin|Glycopeptides|Bleomycin_resistance_protein|BRP	gi|985566439|dbj|LC068960.1|7566-7965 gi|985566378|dbj|LC068959.1|19067-19466 gi|974697948|dbj|AP017320.1|40194-40593 gi|937637449|gb|KT601170.1|49326-49725 gi|908234448|gb|CP010309.1|326139-325740 gi|781886788|dbj|AP014653.1|40205-40604 gi|781883823|dbj|AP014652.1|40205-40604 gi|564687648|gb|KC989517.1|6821-6422 gi|537389513|gb|CP003979.1|40206-40605 gi|695227767|ref|NG_041676.1|6821-6422
CARD	25|JN645706.1|JN645706|betalactams|Penicillin_binding_protein|PBP2X	@phgb|JN645706|0-2253|ARO:3003043|PBP2x [Streptococcus pneumoniae]
NCBI	25|JN645706.1|JN645706|betalactams|Penicillin_binding_protein|PBP2X	gi|379070604|gb|JN645705.1|1-2253
ARG-ANNOT	Bla|OCH-2|AJ295340|1-1173|1173|betalactams|Class_C_betalactamases|OCH	(Bla)OCH-2:AJ295340:1-1173:1173
CARD	Bla|OCH-2|AJ295340|1-1173|1173|betalactams|Class_C_betalactamases|OCH	@phgb|AJ295340|0-1173|ARO:3002515|OCH-2 [Ochrobactrum anthropi]
NCBI	Bla|OCH-2|AJ295340|1-1173|1173|betalactams|Class_C_betalactamases|OCH	gi|11544698|emb|AJ295340.1|1-1173
Resfinder	Bla|OCH-2|AJ295340|1-1173|1173|betalactams|Class_C_betalactamases|OCH	blaOCH-2_1_AJ295340
CARD	CARD|pvgb|CP002332|1271761-1272961|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP002332|1271761-1272961|ARO:3001312|elfamycin resistant EF-Tu [Helicobacter pylori Gambia94/24]
NCBI	CARD|pvgb|CP002332|1271761-1272961|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|317013424|gb|CP002332.1|1271762-1272962
NCBI	Bla|TEM-135_1_GQ896333|betalactams|Class_A_betalactamases|TEM	gi|260586479|gb|GQ896333.1|1-861
Resfinder	Bla|TEM-135_1_GQ896333|betalactams|Class_A_betalactamases|TEM	blaTEM-135_1_GQ896333
NCBI	Sul|sul1_5_EU780013|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695213434|ref|NG_036607.1|16290-17156
Resfinder	Sul|sul1_5_EU780013|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_5_EU780013
NCBI	Sul|CR628337.1|gene2815|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|FOLP|RequiresSNPConfirmation	gi|53752796|emb|CR628337.1|3094181-3093387
NCBI	gi|1524112|emb|X92508.1|betalactams|Class_C_betalactamases|CMY	gi|695197690|ref|NG_034779.1|1-1560 gi|573013567|dbj|AP013064.1|27435-27602 gi|573013567|dbj|AP013064.1|29690-29857 gi|573013567|dbj|AP013064.1|29858-29976 gi|146150962|gb|EF382672.1|102351-102518 gi|695199441|ref|NG_035225.1|331-498 gi|695200064|ref|NG_035368.1|1-118
CARD	CARD|phgb|AY036620|88-949|ARO:3001092|SHV-34|betalactams|Class_A_betalactamases|SHV	@phgb|AY036620|88-949|ARO:3001092|SHV-34 [Escherichia coli]
NCBI	CARD|phgb|AY036620|88-949|ARO:3001092|SHV-34|betalactams|Class_A_betalactamases|SHV	gi|14532426|gb|AY036620.1|89-950 gi|14532426|gb|AY036620.1|53-88
ARG-ANNOT	MLS|ErmF|M14730|241-1041|801|MLS|23S_rRNA_methyltransferases|ERMF	(MLS)ErmF:M14730:241-1041:801
CARD	MLS|ErmF|M14730|241-1041|801|MLS|23S_rRNA_methyltransferases|ERMF	@phgb|M17124|1181-1982|ARO:3000498|ErmF [Bacteroides fragilis]
NCBI	MLS|ErmF|M14730|241-1041|801|MLS|23S_rRNA_methyltransferases|ERMF	gi|385137449|gb|JQ776640.1|2552-3352 gi|1016679|gb|U30830.1|CVU30830|5315-4515 gi|695196788|ref|NG_034521.1|1182-1982 gi|695197338|ref|NG_034698.1|1286-486 gi|695196720|ref|NG_034500.1|241-1041 gi|7715975|gb|AF203972.1|4401-3607
Resfinder	MLS|ErmF|M14730|241-1041|801|MLS|23S_rRNA_methyltransferases|ERMF	erm(F)_2_M17124
NCBI	Bla|EU408350.1|gene12|betalactams|Class_B_betalactamases|LRA	gi|169647637|gb|EU408350.1|12585-11680
CARD	CARD|phgb|AF301532|7-868|ARO:3001087|SHV-29|betalactams|Class_A_betalactamases|SHV	@phgb|AF301532|7-868|ARO:3001087|SHV-29 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF301532|7-868|ARO:3001087|SHV-29|betalactams|Class_A_betalactamases|SHV	gi|12247465|gb|AF301532.1|AF301532|8-869
CARD	CARD|phgb|CP003583|2403484-2405254|ARO:3000776|adeC|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEC	@phgb|CP003583|2403484-2405254|ARO:3000776|adeC [Enterococcus faecium DO]
NCBI	CARD|phgb|CP003583|2403484-2405254|ARO:3000776|adeC|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEC	gi|974999704|gb|CP013994.1|2594492-2596262 gi|941949718|gb|CP013009.1|390503-388733 gi|529202214|gb|CP006620.1|2592900-2594670 gi|445187230|gb|CP004063.1|2340907-2342677 gi|388532432|gb|CP003583.1|2403485-2405255 gi|378937014|gb|CP003351.1|2539897-2541667
NCBI	Flq|QnrB29_2_JN173053|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224419|ref|NG_041071.1|37-681
Resfinder	Flq|QnrB29_2_JN173053|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB29_2_JN173053
ARG-ANNOT	Bla|TEM-160|EF136377|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-160:EF136377:1-861:861
CARD	Bla|TEM-160|EF136377|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|EF136377|0-861|ARO:3001026|TEM-160 [Proteus mirabilis]
Lahey	Bla|TEM-160|EF136377|1-861|861|betalactams|Class_A_betalactamases|TEM	ABM54870.1 EF136377.1:1-861
NCBI	Bla|TEM-160|EF136377|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|121485912|gb|EF136377.1|1-861
Resfinder	Bla|TEM-160|EF136377|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-160_1_EF136377
NCBI	Bla|AY590467.1|gene1|betalactams|Class_A_betalactamases|SHV	gi|46562013|gb|AY590467.1|2-729
ARG-ANNOT	Bla|Shv-18|EU684753|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-18:EU684753:1-861:861
CARD	Bla|Shv-18|EU684753|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF132290|87-948|ARO:3001076|SHV-18 [Klebsiella pneumoniae]
Lahey	Bla|Shv-18|EU684753|1-861|861|betalactams|Class_A_betalactamases|SHV	AAF64386.1 AF132290.1:88-948
NCBI	Bla|Shv-18|EU684753|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|195976046|gb|EU684753.1|1-861 gi|7595230|gb|AF132290.1|AF132290|88-948 gi|14532426|gb|AY036620.1|53-88
Resfinder	Bla|Shv-18|EU684753|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-18_1_AF132290
CARD	252|FJ744595.1|FJ744595|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRD	@phgb|FJ744595|298-1483|ARO:3000309|emrD [Klebsiella pneumoniae]
NCBI	252|FJ744595.1|FJ744595|Multi-drug_resistance|Multi-drug_efflux_pumps|EMRD	gi|224815202|gb|FJ744595.1|299-1483
CARD	CARD|phgb|NC_003112|1795181-1796420|ARO:3000810|mtrC|Multi-drug_resistance|Multi-drug_efflux_pumps|MTRC	@phgb|NC_003112|1795181-1796420|ARO:3000810|mtrC [Neisseria meningitidis MC58]
NCBI	CARD|phgb|NC_003112|1795181-1796420|ARO:3000810|mtrC|Multi-drug_resistance|Multi-drug_efflux_pumps|MTRC	gi|325199235|gb|CP002420.1|536071-534832 gi|66731897|gb|AE002098.2|1795182-1796421
CARD	gi|546237221|gb|KF297584.1|betalactams|Class_D_betalactamases|OXA	@phgb|KF297584|0-831|ARO:3001542|OXA-355 [Acinetobacter bereziniae]
Lahey	gi|546237221|gb|KF297584.1|betalactams|Class_D_betalactamases|OXA	AGW83453.1 KF297584.1:1-831
NCBI	gi|546237221|gb|KF297584.1|betalactams|Class_D_betalactamases|OXA	gi|546237221|gb|KF297584.1|1-831
Resfinder	gi|546237221|gb|KF297584.1|betalactams|Class_D_betalactamases|OXA	blaOXA-355_1_KF297584
ARG-ANNOT	Bla|TEM-106|AY101578|215-1075|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-106:AY101578:215-1075:861
CARD	Bla|TEM-106|AY101578|215-1075|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY101578|214-1075|ARO:3000969|TEM-106 [Escherichia coli]
Lahey	Bla|TEM-106|AY101578|215-1075|861|betalactams|Class_A_betalactamases|TEM	AAM52207.1 AY101578.1:215-1075
NCBI	Bla|TEM-106|AY101578|215-1075|861|betalactams|Class_A_betalactamases|TEM	gi|21464484|gb|AY101578.1|215-1075
Resfinder	Bla|TEM-106|AY101578|215-1075|861|betalactams|Class_A_betalactamases|TEM	blaTEM-106_1_AY101578
NCBI	Rif|NC_003197.1.1255679|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|973795115|gb|AE006468.2|4365921-4369949 gi|482539349|gb|CP003836.1|4360785-4364813 gi|312910970|dbj|AP011957.1|4470995-4475023 gi|226358456|gb|FJ797634.1|1-4029 gi|6358641|gb|AF170176.1|STYSTMF1|10625-14653
CARD	Phe|AY034138.1|gene10|Phenicol|Phenicol_efflux_pumps|FLOR	@phgb|AY055428|16398-17613|ARO:3002705|floR [Vibrio cholerae]
NCBI	Phe|AY034138.1|gene10|Phenicol|Phenicol_efflux_pumps|FLOR	gi|21885263|gb|AY055428.1|16399-17613 gi|17017469|gb|AY034138.1|12159-13373 gi|32469306|dbj|AB114188.1|11605-12819
NCBI	gi|1435024|dbj|D37830.1|ECOBELA|betalactams|Class_A_betalactamases|CTX	gi|1435024|dbj|D37830.1|ECOBELA|91-1037
NCBI	gi|41816|emb|X57972.1|betalactams|Class_A_betalactamases|TEM	gi|41816|emb|X57972.1|1-1200 gi|970697516|gb|KT935445.1|6140-6305 gi|943457735|gb|KT818627.1|32855-33020 gi|943457735|gb|KT818627.1|72074-71909 gi|943457735|gb|KT818627.1|75121-74956 gi|943457735|gb|KT818627.1|133665-133500 gi|943457735|gb|KT818627.1|136712-136547 gi|943457735|gb|KT818627.1|74964-74889 gi|943457735|gb|KT818627.1|136555-136480 gi|959195734|gb|CP013326.1|57957-57792 gi|959195734|gb|CP013326.1|61004-60839 gi|959195734|gb|CP013326.1|60847-60772 gi|959190351|gb|CP013324.1|107411-107246 gi|959190351|gb|CP013324.1|110458-110293 gi|959190351|gb|CP013324.1|110301-110226 gi|973743069|gb|KT894025.1|2234-2395 gi|948549813|dbj|LC094340.1|8524-8441 gi|948549806|dbj|LC094339.1|8146-8063 gi|948549800|dbj|LC094338.1|5089-5006 gi|948549794|dbj|LC094337.1|5413-5330
Lahey	gi|397133432|gb|JQ396379.1|betalactams|Class_D_betalactamases|OXA	AFO09969.1 JQ396379.1:1-747
NCBI	gi|397133432|gb|JQ396379.1|betalactams|Class_D_betalactamases|OXA	gi|397133432|gb|JQ396379.1|1-747
NCBI	Bla|AY605049.2|gene1|betalactams|Class_B_betalactamases|VIM	gi|54887317|gb|AY605049.2|1-948 gi|51571647|emb|AJ628983.2|954-1901
NCBI	gi|303297116|gb|HM776707.1|betalactams|Class_A_betalactamases|CTX	gi|303297116|gb|HM776707.1|1-925
NCBI	Bla|blaGOB-1_1_EF394442|betalactams|Class_B_betalactamases|GOB	gi|126571830|gb|EF394442.1|1-873
Resfinder	Bla|blaGOB-1_1_EF394442|betalactams|Class_B_betalactamases|GOB	blaGOB-1_1_EF394442
ARG-ANNOT	Bla|GES-5|DQ236171|112-975|864|betalactams|Class_A_betalactamases|GES	(Bla)GES-5:DQ236171:112-975:864
NCBI	Bla|GES-5|DQ236171|112-975|864|betalactams|Class_A_betalactamases|GES	gi|873464357|gb|KR014105.1|18969-19832 gi|770533404|gb|KF745070.2|2053-2916 gi|371449813|gb|JN849690.1|2729-3592 gi|371449803|gb|JN849689.1|4690-5553 gi|356609718|gb|JF826499.1|11979-12842 gi|294769319|gb|GU831564.1|1-864 gi|255039693|gb|GQ337064.1|2847-3710 gi|238865601|gb|GQ139471.1|389-1252 gi|167374771|gb|EU266532.1|3043-3906 gi|121722588|gb|EF190326.1|517-1380
Resfinder	Bla|GES-5|DQ236171|112-975|864|betalactams|Class_A_betalactamases|GES	blaGES-5_1_DQ236171
CARD	Bla|Y17584.1|gene1|betalactams|Class_A_betalactamases|TEM	@phgb|Y17584|0-858|ARO:3000899|TEM-29 [Escherichia coli]
Lahey	Bla|Y17584.1|gene1|betalactams|Class_A_betalactamases|TEM	CAA76796.1 Y17584.1:1-858
NCBI	Bla|Y17584.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|3281931|emb|Y17584.1|1-858 gi|82468436|gb|DQ269440.1|1-858
Resfinder	Bla|Y17584.1|gene1|betalactams|Class_A_betalactamases|TEM	blaTEM-29_1_DQ269440
ARG-ANNOT	Bla|cfiA3|AB087228|1-750|750|betalactams|Class_B_betalactamases|CFIA	(Bla)cfiA3:AB087228:1-750:750
NCBI	Bla|cfiA3|AB087228|1-750|750|betalactams|Class_B_betalactamases|CFIA	gi|22091061|dbj|AB087228.1|1-750
Resfinder	Bla|cfiA3|AB087228|1-750|750|betalactams|Class_B_betalactamases|CFIA	cfiA3_1_AB087228
NCBI	1463|M81802.1|STAMSRB|MLS|Macrolide_resistance_efflux_pumps|MSRA	gi|153050|gb|M81802.1|STAMSRB|94-624
Resfinder	1463|M81802.1|STAMSRB|MLS|Macrolide_resistance_efflux_pumps|MSRA	msr(A)_3_M81802
ARG-ANNOT	Bla|LEN-21|AM850911|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-21:AM850911:1-861:861
CARD	Bla|LEN-21|AM850911|1-861|861|betalactams|Class_A_betalactamases|LEN	@phgb|AM850911|0-861|ARO:3002468|LEN-21 [Klebsiella pneumoniae]
NCBI	Bla|LEN-21|AM850911|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|197724694|emb|AM850911.2|1-861
Resfinder	Bla|LEN-21|AM850911|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN21_1_AM850911
ARG-ANNOT	Bla|IMP-27|JF894248|1-741|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-27:JF894248:1-741:741
CARD	Bla|IMP-27|JF894248|1-741|741|betalactams|Class_B_betalactamases|IMP	@phgb|JF894248|0-741|ARO:3002218|IMP-27 [Proteus mirabilis]
Lahey	Bla|IMP-27|JF894248|1-741|741|betalactams|Class_B_betalactamases|IMP	AEH41427.1 JF894248.1:1-741
NCBI	Bla|IMP-27|JF894248|1-741|741|betalactams|Class_B_betalactamases|IMP	gi|335345650|gb|JF894248.1|1-741
Resfinder	Bla|IMP-27|JF894248|1-741|741|betalactams|Class_B_betalactamases|IMP	blaIMP-27_1_JF894248
CARD	Tmt|EU780012.1|gene2|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	@phgb|EU780012|2162-2645|ARO:3002859|dfrA14 [Escherichia coli]
NCBI	Tmt|EU780012.1|gene2|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|909636816|emb|LN850165.1|92160-92642 gi|628945896|gb|KJ488983.1|70-552 gi|695224161|ref|NG_041026.1|2339-2821 gi|429138626|gb|JX867128.1|1088-1570 gi|363585886|gb|JN102344.1|31556-32038 gi|346642177|gb|JN012467.1|1512-1994 gi|342521408|gb|JF264731.1|102-584 gi|342521357|gb|JF264730.1|103-585 gi|339279223|emb|FR875294.1|101-583 gi|208972753|gb|EU780012.1|2163-2645
ARG-ANNOT	Tet|TetS|L09756|447-2372|1926|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETS	(Tet)TetS:L09756:447-2372:1926
CARD	Tet|TetS|L09756|447-2372|1926|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETS	@phgb|L09756|0-1926|ARO:3000192|tetS [Listeria monocytogenes]
NCBI	Tet|TetS|L09756|447-2372|1926|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETS	gi|645492800|gb|KF278750.1|16587-14662 gi|425885424|gb|JX865374.1|424-2349 gi|401667415|gb|JX275965.1|7049-8974 gi|388785684|gb|JQ762256.1|6925-5000 gi|388785684|gb|JQ762256.1|3381-3410 gi|380040884|gb|JN980093.1|1178-3103 gi|347952137|gb|JN208881.1|23894-25819 gi|695224963|ref|NG_041201.1|3589-1664 gi|283466063|emb|FN555436.1|26590-28515 gi|260177113|gb|GQ900487.1|25739-27664 gi|171854418|dbj|AB290882.1|15063-16988
Resfinder	Tet|TetS|L09756|447-2372|1926|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETS	tet(S)_2_L09756
ARG-ANNOT	gi|157779402|gb|EU019534.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-79:EU019534:1-825:825
CARD	gi|157779402|gb|EU019534.1|betalactams|Class_D_betalactamases|OXA	@phgb|EU019534|0-825|ARO:3001633|OXA-79 [Acinetobacter baumannii]
Lahey	gi|157779402|gb|EU019534.1|betalactams|Class_D_betalactamases|OXA	ABV71246.1 EU019534.1:1-825
NCBI	gi|157779402|gb|EU019534.1|betalactams|Class_D_betalactamases|OXA	gi|157779402|gb|EU019534.1|1-825
Resfinder	gi|157779402|gb|EU019534.1|betalactams|Class_D_betalactamases|OXA	blaOXA-79_1_EU019534
NCBI	gi|591389157|gb|KF986261.1|betalactams|Class_D_betalactamases|OXA	gi|591389157|gb|KF986261.1|1-917
ARG-ANNOT	Bla|ACT-12|JX440355|752-1897|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-12:JX440355:752-1897:1146
CARD	Bla|ACT-12|JX440355|752-1897|1146|betalactams|Class_C_betalactamases|ACT	@phgb|JX440355|751-1897|ARO:3001834|ACT-12 [Enterobacter cloacae]
Lahey	Bla|ACT-12|JX440355|752-1897|1146|betalactams|Class_C_betalactamases|ACT	AFU25650.1 JX440355.1:752-1897
NCBI	Bla|ACT-12|JX440355|752-1897|1146|betalactams|Class_C_betalactamases|ACT	gi|407731534|gb|JX440355.1|752-1897
Resfinder	Bla|ACT-12|JX440355|752-1897|1146|betalactams|Class_C_betalactamases|ACT	blaACT-12_1_JX440355
CARD	CARD|pvgb|AP009048|3760295-3762710|ARO:3003303|Escherichia|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	@pvgb|AP009048|3760295-3762710|ARO:3003303|Escherichia coli gyrB conferring resistance to aminocoumarin [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|pvgb|AP009048|3760295-3762710|ARO:3003303|Escherichia|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRB|RequiresSNPConfirmation	gi|985000614|gb|CP014225.1|2077319-2074904 gi|958627747|gb|CP013253.1|4122632-4125047 gi|958612453|gb|CP013048.1|345218-347633 gi|939732440|gb|CP011343.2|3860082-3857667 gi|939731527|gb|CP011342.2|3861142-3858727 gi|937526251|gb|CP012870.1|761536-763951 gi|937521852|gb|CP012869.1|761536-763951 gi|937517453|gb|CP012868.1|761536-763951 gi|923416119|gb|CP011113.1|3836846-3834431 gi|899729770|gb|CP012127.1|3853328-3850913
ARG-ANNOT	Bla|cfxA2|AF504910|1-966|966|betalactams|Class_A_betalactamases|CFX	(Bla)cfxA2:AF504910:1-966:966
NCBI	Bla|cfxA2|AF504910|1-966|966|betalactams|Class_A_betalactamases|CFX	gi|21327004|gb|AF504910.1|1-966
ARG-ANNOT	249|AY743590.1|AY743590|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET39	(Tet)Tet-39:AY743590:749-1936:1188
CARD	249|AY743590.1|AY743590|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET39	@phgb|AY743590|0-1188|ARO:3000566|tet39 [Acinetobacter sp. LUH5605]
NCBI	249|AY743590.1|AY743590|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET39	gi|924867386|gb|KT346360.1|3101-1914 gi|695211247|ref|NG_036045.1|749-1936 gi|187384667|gb|EU495991.1|711-1 gi|187384663|gb|EU495989.1|1-711 gi|77745205|gb|DQ195075.1|2-675
CARD	gi|536624018|gb|KF515536.1|betalactams|Class_C_betalactamases|ACT	@phgb|KF515536|0-1146|ARO:3001828|ACT-23 [Enterobacter cloacae]
Lahey	gi|536624018|gb|KF515536.1|betalactams|Class_C_betalactamases|ACT	AGU38146.1 KF515536.1:1-1146
NCBI	gi|536624018|gb|KF515536.1|betalactams|Class_C_betalactamases|ACT	gi|536624018|gb|KF515536.1|1-1146
NCBI	gi|74422856|gb|DQ174307.1|betalactams|Class_A_betalactamases|SHV	gi|74422856|gb|DQ174307.1|1-865
ARG-ANNOT	Bla|SHV-42|AF535130|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-42:AF535130:1-861:861
CARD	Bla|SHV-42|AF535130|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF535130|0-861|ARO:3001100|SHV-42 [Klebsiella pneumoniae]
Lahey	Bla|SHV-42|AF535130|1-861|861|betalactams|Class_A_betalactamases|SHV	AAN04884.1 AF535130.1:1-861
NCBI	Bla|SHV-42|AF535130|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|22725672|gb|AF535130.1|1-861
Resfinder	Bla|SHV-42|AF535130|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-42_1_EF035559
NCBI	Bla|SHV-11_7_GQ407109|betalactams|Class_A_betalactamases|SHV	gi|943457735|gb|KT818627.1|89545-88685 gi|943457735|gb|KT818627.1|151138-150278 gi|746616805|gb|KJ187752.1|63128-62268 gi|667713574|gb|CP006801.1|57446-58306 gi|257043735|gb|GQ407109.1|1-861
Resfinder	Bla|SHV-11_7_GQ407109|betalactams|Class_A_betalactamases|SHV	blaSHV-11_7_GQ407109
ARG-ANNOT	gi|225698231|gb|FJ807656.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-154:FJ807656:1-861:861
CARD	gi|225698231|gb|FJ807656.1|betalactams|Class_A_betalactamases|TEM	@phgb|FJ807656|0-861|ARO:3001020|TEM-154 [Escherichia coli]
Lahey	gi|225698231|gb|FJ807656.1|betalactams|Class_A_betalactamases|TEM	ACO07310.1 FJ807656.1:1-861
NCBI	gi|225698231|gb|FJ807656.1|betalactams|Class_A_betalactamases|TEM	gi|225698231|gb|FJ807656.1|1-861
Resfinder	gi|225698231|gb|FJ807656.1|betalactams|Class_A_betalactamases|TEM	blaTEM-154_1_FJ807656
ARG-ANNOT	Bla|SHV-29|AF301532|8-868|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-29:AF301532:8-868:861
CARD	Bla|SHV-29|AF301532|8-868|861|betalactams|Class_A_betalactamases|SHV	@phgb|AF301532|7-868|ARO:3001087|SHV-29 [Klebsiella pneumoniae]
Lahey	Bla|SHV-29|AF301532|8-868|861|betalactams|Class_A_betalactamases|SHV	AAG49894.1 AF301532.1:8-868
NCBI	Bla|SHV-29|AF301532|8-868|861|betalactams|Class_A_betalactamases|SHV	gi|12247465|gb|AF301532.1|AF301532|8-868
Resfinder	Bla|SHV-29|AF301532|8-868|861|betalactams|Class_A_betalactamases|SHV	blaSHV-29_1_AF301532
NCBI	gi|388564843|gb|JQ733575.1|betalactams|Class_C_betalactamases|CMY	gi|388564843|gb|JQ733575.1|1028-2255
ARG-ANNOT	Bla|FONA-3|AJ251241|1054-1941|888|betalactams|Class_A_betalactamases|FONA	(Bla)FONA-3:AJ251241:1054-1941:888
NCBI	Bla|FONA-3|AJ251241|1054-1941|888|betalactams|Class_A_betalactamases|FONA	gi|6468741|emb|AJ251241.1|1054-1941
Resfinder	Bla|FONA-3|AJ251241|1054-1941|888|betalactams|Class_A_betalactamases|FONA	blaFONA-3_1_AJ251241
NCBI	gi|6176547|gb|AF190695.1|betalactams|Class_A_betalactamases|TEM	gi|6176547|gb|AF190695.1|AF190695|1-1103 gi|961666360|gb|KT185451.1|87734-87690
NCBI	Mdr|L32599.1|gene2|Multi-drug_resistance|Multi-drug_efflux_pumps|BLT	gi|983204966|gb|CP014166.1|2557552-2558860 gi|846133629|gb|CP011882.1|3491911-3493219 gi|807072327|gb|CP011115.1|2716868-2718176 gi|749183975|gb|CP010314.1|2696360-2697668 gi|728887195|gb|CP010053.1|2716630-2717938 gi|728882887|gb|CP010052.1|2716879-2718187 gi|724425628|emb|LN680001.1|2734878-2736186 gi|723796434|emb|LN649259.1|2734876-2736184 gi|670919138|gb|CP005997.1|2523019-2524327 gi|649013680|gb|CP008698.1|2689633-2690941
ARG-ANNOT	CARD|phgb|FJ624872|0-851|ARO:3002319|KPC-9|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-9:FJ624872:1-854:854
CARD	CARD|phgb|FJ624872|0-851|ARO:3002319|KPC-9|betalactams|Class_A_betalactamases|KPC	@phgb|FJ624872|0-851|ARO:3002319|KPC-9 [Escherichia coli]
NCBI	CARD|phgb|FJ624872|0-851|ARO:3002319|KPC-9|betalactams|Class_A_betalactamases|KPC	gi|223558116|gb|FJ624872.1|1-852
Resfinder	CARD|phgb|FJ624872|0-851|ARO:3002319|KPC-9|betalactams|Class_A_betalactamases|KPC	blaKPC-9_1_FJ624872
ARG-ANNOT	AGly|Aac6-IIa|M29695|707-1261|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-IIa:M29695:707-1261:555
NCBI	AGly|Aac6-IIa|M29695|707-1261|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|449331950|gb|KC170993.1|1509-2063 gi|449331950|gb|KC170993.1|4199-4753 gi|150959|gb|M29695.1|PSEAAC6II|707-1261
Resfinder	AGly|Aac6-IIa|M29695|707-1261|555|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-IIa_1_M29695
NCBI	gi|124263631|gb|EF210159.1|betalactams|Class_A_betalactamases|CTX	gi|124263631|gb|EF210159.1|1-921
ARG-ANNOT	gi|30984106|gb|AY288915.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-50:AY288915:1-861:861
CARD	gi|30984106|gb|AY288915.1|betalactams|Class_A_betalactamases|SHV	@phgb|AY288915|0-861|ARO:3001107|SHV-50 [Klebsiella pneumoniae]
Lahey	gi|30984106|gb|AY288915.1|betalactams|Class_A_betalactamases|SHV	AAP41108.1 AY288915.1:1-861
NCBI	gi|30984106|gb|AY288915.1|betalactams|Class_A_betalactamases|SHV	gi|30984106|gb|AY288915.1|1-861
Resfinder	gi|30984106|gb|AY288915.1|betalactams|Class_A_betalactamases|SHV	blaSHV-50_1_AY288915
CARD	CARD|phgb|L20573|1317-1944|ARO:3002988|bcrB|Bacitracin|Bacitracin_ABC_transporter|BCRB	@phgb|L20573|1317-1944|ARO:3002988|bcrB [Bacillus licheniformis]
NCBI	CARD|phgb|L20573|1317-1944|ARO:3002988|bcrB|Bacitracin|Bacitracin_ABC_transporter|BCRB	gi|510140713|gb|CP005965.1|2576039-2575412 gi|4464275|gb|AF007865.2|AF007865|47334-47961 gi|466477|gb|L20573.1|BACBCRABC|1318-1945 gi|387912612|gb|JQ315403.1|1-439 gi|387912610|gb|JQ315402.1|437-1
NCBI	gi|591389147|gb|KF986256.1|betalactams|Class_D_betalactamases|OXA	gi|591389147|gb|KF986256.1|1-867
ARG-ANNOT	Bla|SHV-103|EU032604|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-103:EU032604:1-861:861
CARD	Bla|SHV-103|EU032604|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|EU032604|0-861|ARO:3001152|SHV-103 [Klebsiella pneumoniae]
Lahey	Bla|SHV-103|EU032604|1-861|861|betalactams|Class_A_betalactamases|SHV	ABS72351.1 EU032604.1:1-861
NCBI	Bla|SHV-103|EU032604|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|154269502|gb|EU032604.1|1-861
Resfinder	Bla|SHV-103|EU032604|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-103_1_EU032604
NCBI	Gly|VanT-C_2_EU151752|Glycopeptides|VanC-type_resistance_protein|VANTC	gi|161779845|gb|EU151752.1|1647-3749
Resfinder	Gly|VanT-C_2_EU151752|Glycopeptides|VanC-type_resistance_protein|VANTC	VanT-C_2_EU151752
CARD	Flq|QnrB70_1_KC580659|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|KC580659|0-645|ARO:3002782|QnrB70 [Citrobacter braakii]
NCBI	Flq|QnrB70_1_KC580659|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|496297329|gb|KC580659.1|1-645
Resfinder	Flq|QnrB70_1_KC580659|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB70_1_KC580659
ARG-ANNOT	Bla|GOB-6|AF189292|1-756|756|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-6:AF189292:1-756:756
NCBI	Bla|GOB-6|AF189292|1-756|756|betalactams|Class_B_betalactamases|GOB	gi|9587043|gb|AF189292.1|AF189292|1-756
Resfinder	Bla|GOB-6|AF189292|1-756|756|betalactams|Class_B_betalactamases|GOB	blaGOB-6_1_AF189292
NCBI	MLS|erm42_2_AB601890|MLS|23S_rRNA_methyltransferases|ERM42	gi|312836915|dbj|AB601890.1|4808-5719
Resfinder	MLS|erm42_2_AB601890|MLS|23S_rRNA_methyltransferases|ERM42	erm(42)_2_AB601890
ARG-ANNOT	gi|147886440|gb|EF581285.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-104:EF581285:1-822:822
CARD	gi|147886440|gb|EF581285.1|betalactams|Class_D_betalactamases|OXA	@phgb|EF581285|0-822|ARO:3001636|OXA-104 [Acinetobacter baumannii]
Lahey	gi|147886440|gb|EF581285.1|betalactams|Class_D_betalactamases|OXA	ABQ52429.1 EF581285.1:1-822
NCBI	gi|147886440|gb|EF581285.1|betalactams|Class_D_betalactamases|OXA	gi|147886440|gb|EF581285.1|1-822
Resfinder	gi|147886440|gb|EF581285.1|betalactams|Class_D_betalactamases|OXA	blaOXA-104_1_EF581285
CARD	Bla|SHV-1_9_HM751102|betalactams|Class_A_betalactamases|SHV	@phgb|FJ668814|76-937|ARO:3001059|SHV-1 [Klebsiella pneumoniae]
NCBI	Bla|SHV-1_9_HM751102|betalactams|Class_A_betalactamases|SHV	gi|723234405|gb|CP009863.1|2580841-2579981 gi|695220766|ref|NG_039554.1|77-937 gi|221149257|gb|EU418908.1|1-861 gi|2113852|emb|X98099.1|74-934 gi|161703204|gb|EU280315.1|2-861 gi|401871154|gb|JX121115.1|1-856
Resfinder	Bla|SHV-1_9_HM751102|betalactams|Class_A_betalactamases|SHV	blaSHV-1_9_HM751102
CARD	CARD|phgb|AJ223970|796-2050|ARO:3000463|gimA|MLS|Macrolide_glycosyltransferases|GIMA	@phgb|AJ223970|796-2050|ARO:3000463|gimA glycosyltransferase [Streptomyces ambofaciens]
NCBI	CARD|phgb|AJ223970|796-2050|ARO:3000463|gimA|MLS|Macrolide_glycosyltransferases|GIMA	gi|917646380|gb|CP012382.1|6295864-6297118 gi|3294230|emb|AJ223970.1|797-2051
ARG-ANNOT	647|AF047479.2|AF047479|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	(Phe)CatB2:AF047479:5957-6589:534
CARD	647|AF047479.2|AF047479|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	@phgb|AJ487034|1589-2222|ARO:3002675|catB2 [Salmonella enterica subsp. enterica serovar Enteritidis]
NCBI	647|AF047479.2|AF047479|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|948288901|gb|KR259326.1|730-1362 gi|948288896|gb|KR259325.1|732-1364 gi|948288891|gb|KR259324.1|730-1362 gi|948288886|gb|KR259323.1|730-1362 gi|948288881|gb|KR259322.1|735-1367 gi|825088700|gb|KP975077.1|104051-103419 gi|635661965|gb|KJ547703.1|3378-4010 gi|619321204|gb|KF977034.1|33856-34488 gi|578357653|gb|KF856617.1|3891-4523 gi|695227272|ref|NG_041635.1|723-1355
Resfinder	647|AF047479.2|AF047479|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	catB2_1_AF047479
ARG-ANNOT	Bla|IMP-32|JQ002629|114-854|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-32:JQ002629:114-854:741
CARD	Bla|IMP-32|JQ002629|114-854|741|betalactams|Class_B_betalactamases|IMP	@phgb|JQ002629|113-854|ARO:3002223|IMP-32 [Klebsiella pneumoniae]
Lahey	Bla|IMP-32|JQ002629|114-854|741|betalactams|Class_B_betalactamases|IMP	AFR33816.1 JQ002629.1:114-854
NCBI	Bla|IMP-32|JQ002629|114-854|741|betalactams|Class_B_betalactamases|IMP	gi|403309640|gb|JQ002629.1|114-854
Resfinder	Bla|IMP-32|JQ002629|114-854|741|betalactams|Class_B_betalactamases|IMP	blaIMP-32_1_JQ002629
NCBI	gi|591389165|gb|KJ135343.1|betalactams|Class_D_betalactamases|OXA	gi|591389165|gb|KJ135343.1|1-913
CARD	1458|M11587.1|PRMCATA|Phenicol|Chloramphenicol_acetyltransferases|CATA	@phgb|M11587|879-1533|ARO:3002670|cat [Proteus mirabilis]
NCBI	1458|M11587.1|PRMCATA|Phenicol|Chloramphenicol_acetyltransferases|CATA	gi|150882|gb|M11587.1|PRMCATA|880-1533
Resfinder	1458|M11587.1|PRMCATA|Phenicol|Chloramphenicol_acetyltransferases|CATA	cat_1_M11587
NCBI	Flq|NC_006582.1.3202074|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|56908016|dbj|AP006627.1|2101292-2098869
NCBI	Rif|CP000675.2|gene392|Rifampin|Rifampin-resistant_beta-subunit_of_RNA_polymerase_RpoB|RPOB|RequiresSNPConfirmation	gi|225791049|gb|CP000675.2|424064-428170 gi|3549148|gb|AF087812.1|AF087812|69-4175 gi|50657976|gb|AY676563.1|1-419
ARG-ANNOT	Bla|OKP-B018|AM850920|41-901|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-18:AM850920:41-901:861
CARD	Bla|OKP-B018|AM850920|41-901|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM850920|40-901|ARO:3002451|OKP-B-18 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B018|AM850920|41-901|861|betalactams|Class_A_betalactamases|OKP	gi|197724605|emb|AM850920.1|41-901
Resfinder	Bla|OKP-B018|AM850920|41-901|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-18_1_AM850920
ARG-ANNOT	Bla|SHV-158|JX121125|1-858|858|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-158:JX121125:1-858:858
CARD	Bla|SHV-158|JX121125|1-858|858|betalactams|Class_A_betalactamases|SHV	@phgb|JX121125|0-858|ARO:3001197|SHV-158 [Klebsiella pneumoniae]
Lahey	Bla|SHV-158|JX121125|1-858|858|betalactams|Class_A_betalactamases|SHV	AFQ23964.1 JX121125.1:1-858
NCBI	Bla|SHV-158|JX121125|1-858|858|betalactams|Class_A_betalactamases|SHV	gi|401871174|gb|JX121125.1|1-858
Resfinder	Bla|SHV-158|JX121125|1-858|858|betalactams|Class_A_betalactamases|SHV	blaSHV-158_1_JX121125
NCBI	gi|68012687|gb|DQ061159.1|betalactams|Class_A_betalactamases|CTX	gi|68012687|gb|DQ061159.1|1-1225 gi|529205529|gb|KC788405.1|41529-41384 gi|529205529|gb|KC788405.1|42938-42859
ARG-ANNOT	Bla|OXA-166|HM488987|1-822|822|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-166:HM488987:1-822:822
CARD	Bla|OXA-166|HM488987|1-822|822|betalactams|Class_D_betalactamases|OXA	@phgb|HM488987|0-822|ARO:3001466|OXA-166 [Acinetobacter baumannii]
Lahey	Bla|OXA-166|HM488987|1-822|822|betalactams|Class_D_betalactamases|OXA	ADK35870.1 HM488987.1:1-822
NCBI	Bla|OXA-166|HM488987|1-822|822|betalactams|Class_D_betalactamases|OXA	gi|300825671|gb|HM488987.1|1-822
Resfinder	Bla|OXA-166|HM488987|1-822|822|betalactams|Class_D_betalactamases|OXA	blaOXA-166_1_HM488987
CARD	gi|698174191|gb|KM087850.1|betalactams|Class_C_betalactamases|DHA	@phgb|KM087850|0-1140|ARO:3002148|DHA-17 [Morganella morganii]
Lahey	gi|698174191|gb|KM087850.1|betalactams|Class_C_betalactamases|DHA	AIT76103.1 KM087850.1:1-1140
NCBI	gi|698174191|gb|KM087850.1|betalactams|Class_C_betalactamases|DHA	gi|698174191|gb|KM087850.1|1-1140
NCBI	Flq|CR628337.1|gene1424|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|53752796|emb|CR628337.1|1525332-1527923
ARG-ANNOT	gi|301071045|gb|HM544040.1|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-55:HM544040:1-1146:1146
CARD	gi|301071045|gb|HM544040.1|betalactams|Class_C_betalactamases|CMY	@phgb|HM544040|0-1146|ARO:3002066|CMY-55 [Escherichia coli]
Lahey	gi|301071045|gb|HM544040.1|betalactams|Class_C_betalactamases|CMY	ADK55605.1 HM544040.1:1-1146
NCBI	gi|301071045|gb|HM544040.1|betalactams|Class_C_betalactamases|CMY	gi|301071045|gb|HM544040.1|1-1146
Resfinder	gi|301071045|gb|HM544040.1|betalactams|Class_C_betalactamases|CMY	blaCMY-55_1_HM544040
NCBI	gi|13236847|gb|AY027590.1|betalactams|Class_A_betalactamases|TEM	gi|695200248|ref|NG_035413.1|1-973
CARD	CARD|pvgb|CP001485|303730-304966|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	@pvgb|CP001485|303730-304966|ARO:3001312|elfamycin resistant EF-Tu [Vibrio cholerae MJ-1236]
NCBI	CARD|pvgb|CP001485|303730-304966|ARO:3001312|elfamycin|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|939204655|gb|CP006947.1|2834796-2836032 gi|861210305|gb|CP007653.1|213912-212676 gi|695931389|gb|CP007634.1|2761195-2759959 gi|657184927|dbj|AP014524.1|213965-212729 gi|356645562|gb|CP003069.1|2760518-2759282 gi|229368777|gb|CP001485.1|303731-304967 gi|227011820|gb|CP001235.1|385943-384707 gi|227008125|gb|CP001233.1|321236-320000 gi|146314918|gb|CP000627.1|2878595-2877359 gi|109703404|gb|DQ773055.1|1183-1
CARD	CARD|phgb|FJ768952|0-1488|ARO:3000237|tolC|Multi-drug_resistance|Multi-drug_efflux_pumps|TOLC	@phgb|FJ768952|0-1488|ARO:3000237|tolC [Escherichia coli]
NCBI	CARD|phgb|FJ768952|0-1488|ARO:3000237|tolC|Multi-drug_resistance|Multi-drug_efflux_pumps|TOLC	gi|985000614|gb|CP014225.1|1375309-1376796 gi|939732440|gb|CP011343.2|3153181-3154668 gi|939731527|gb|CP011342.2|3153926-3155413 gi|937526251|gb|CP012870.1|1463547-1462060 gi|937521852|gb|CP012869.1|1463547-1462060 gi|937517453|gb|CP012868.1|1463547-1462060 gi|932857508|emb|LN877770.1|4002440-4003927 gi|923416119|gb|CP011113.1|3134827-3136314 gi|857137982|gb|CP011495.1|4428359-4429846 gi|817589947|gb|CP011324.1|3164203-3165690
ARG-ANNOT	Bla|IND-1|EF394436|1-720|720|betalactams|Class_B_betalactamases|IND	(Bla)IND-1:EF394436:1-720:720
NCBI	Bla|IND-1|EF394436|1-720|720|betalactams|Class_B_betalactamases|IND	gi|126571818|gb|EF394436.1|1-720
NCBI	Bla|TEM-2_3_AJ251946|betalactams|Class_A_betalactamases|TEM	gi|6634544|emb|AJ251946.1|520-1380
Resfinder	Bla|TEM-2_3_AJ251946|betalactams|Class_A_betalactamases|TEM	blaTEM-2_3_AJ251946
ARG-ANNOT	AGly|Aph3-Ia|HQ840942|23569-24384|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-Ia:HQ840942:23569-24384:816
NCBI	AGly|Aph3-Ia|HQ840942|23569-24384|816|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|695225320|ref|NG_041266.1|23569-24384 gi|159885254|dbj|AB366440.1|79958-79143
CARD	223|AJ000283.1|AJ000283|Multi-drug_resistance|Multi-drug_efflux_pumps|TAP	@phgb|AJ000283|619-1849|ARO:3000343|tap [Mycobacterium fortuitum]
NCBI	223|AJ000283.1|AJ000283|Multi-drug_resistance|Multi-drug_efflux_pumps|TAP	gi|2292924|emb|AJ000283.1|620-1849
NCBI	Flq|NC_011595.7059884|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|751410783|gb|CP010781.1|239136-241355 gi|213985689|gb|CP001172.1|3539471-3537252
ARG-ANNOT	gi|30961997|gb|AY288523.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-49:AY288523:1-825:825
CARD	gi|30961997|gb|AY288523.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY288523|0-825|ARO:3001671|OXA-49 [Acinetobacter baumannii]
Lahey	gi|30961997|gb|AY288523.1|betalactams|Class_D_betalactamases|OXA	AAP40270.1 AY288523.1:1-825
NCBI	gi|30961997|gb|AY288523.1|betalactams|Class_D_betalactamases|OXA	gi|30961997|gb|AY288523.1|1-825
Resfinder	gi|30961997|gb|AY288523.1|betalactams|Class_D_betalactamases|OXA	blaOXA-49_1_AY288523
CARD	Bla|OXA-329_1_KF203103|betalactams|Class_D_betalactamases|OXA	@phgb|KF203103|0-822|ARO:3001517|OXA-329 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-329_1_KF203103|betalactams|Class_D_betalactamases|OXA	AGW16411.1 KF203103.1:1-822
NCBI	Bla|OXA-329_1_KF203103|betalactams|Class_D_betalactamases|OXA	gi|544207405|gb|KF203103.1|1-822
Resfinder	Bla|OXA-329_1_KF203103|betalactams|Class_D_betalactamases|OXA	blaOXA-329_1_KF203103
ARG-ANNOT	gi|21388249|emb|AJ318093.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-93:AJ318093:1-861:861
CARD	gi|21388249|emb|AJ318093.1|betalactams|Class_A_betalactamases|TEM	@phgb|AJ318093|0-861|ARO:3000960|TEM-93 [Escherichia coli]
Lahey	gi|21388249|emb|AJ318093.1|betalactams|Class_A_betalactamases|TEM	CAC85660.1 AJ318093.1:1-861
NCBI	gi|21388249|emb|AJ318093.1|betalactams|Class_A_betalactamases|TEM	gi|695208627|ref|NG_035626.1|1-861
Resfinder	gi|21388249|emb|AJ318093.1|betalactams|Class_A_betalactamases|TEM	blaTEM-93_1_AJ318093
ARG-ANNOT	gi|323817046|gb|HQ700343.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-163:HQ700343:1-786:786
CARD	gi|323817046|gb|HQ700343.1|betalactams|Class_D_betalactamases|OXA	@phgb|HQ700343|0-786|ARO:3001783|OXA-163 [Enterobacter cloacae]
Lahey	gi|323817046|gb|HQ700343.1|betalactams|Class_D_betalactamases|OXA	ADY06444.1 HQ700343.1:1-786
NCBI	gi|323817046|gb|HQ700343.1|betalactams|Class_D_betalactamases|OXA	gi|323817046|gb|HQ700343.1|1-786
Resfinder	gi|323817046|gb|HQ700343.1|betalactams|Class_D_betalactamases|OXA	blaOXA-163_1_HQ700343
ARG-ANNOT	gi|58701179|gb|AY750913.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-71:AY750913:1-825:825
CARD	gi|58701179|gb|AY750913.1|betalactams|Class_D_betalactamases|OXA	@phgb|AY750913|0-825|ARO:3001619|OXA-71 [Acinetobacter baumannii]
Lahey	gi|58701179|gb|AY750913.1|betalactams|Class_D_betalactamases|OXA	AAW81342.1 AY750913.1:1-825
NCBI	gi|58701179|gb|AY750913.1|betalactams|Class_D_betalactamases|OXA	gi|57491187|gb|AY859528.1|1-825
Resfinder	gi|58701179|gb|AY750913.1|betalactams|Class_D_betalactamases|OXA	blaOXA-71_1_AY859528
ARG-ANNOT	MLS|ErmT|M64090|168-902|735|MLS|23S_rRNA_methyltransferases|ERMR	(MLS)ErmT:M64090:168-902:735
CARD	MLS|ErmT|M64090|168-902|735|MLS|23S_rRNA_methyltransferases|ERMR	@phgb|M64090|0-735|ARO:3000595|ErmT [Plasmid pGT633]
NCBI	MLS|ErmT|M64090|168-902|735|MLS|23S_rRNA_methyltransferases|ERMR	gi|148726|gb|M64090.1|G63ERMGT|168-902
Resfinder	MLS|ErmT|M64090|168-902|735|MLS|23S_rRNA_methyltransferases|ERMR	erm(T)_1_M64090
NCBI	1541|JF268688.1|JF268688|Phenicol|Chloramphenicol_acetyltransferases|CATB|RequiresSNPConfirmation	gi|343916463|gb|JF268689.1|5207-5836 gi|343916452|gb|JF268688.1|6609-7238
ARG-ANNOT	Gly|VanH-M|FJ349556|3884-4864|981|Glycopeptides|VanM-type_resistance_protein|VANHM	(Gly)VanH-M:FJ349556:3884-4864:981
CARD	Gly|VanH-M|FJ349556|3884-4864|981|Glycopeptides|VanM-type_resistance_protein|VANHM	@phgb|FJ349556|3883-4864|ARO:3002947|vanHM [Enterococcus faecium]
NCBI	Gly|VanH-M|FJ349556|3884-4864|981|Glycopeptides|VanM-type_resistance_protein|VANHM	gi|220901852|gb|FJ349556.1|3884-4864
Resfinder	Gly|VanH-M|FJ349556|3884-4864|981|Glycopeptides|VanM-type_resistance_protein|VANHM	VanH-M_1_FJ349556
CARD	CARD|phgb|AB061440|305-770|ARO:3002870|tet34|Tetracyclines|Tetracycline_inactivation_enzymes|TET34	@phgb|AB061440|305-770|ARO:3002870|tet34 [Vibrio sp. No.6]
NCBI	CARD|phgb|AB061440|305-770|ARO:3002870|tet34|Tetracyclines|Tetracycline_inactivation_enzymes|TET34	gi|14278992|dbj|AB061440.1|306-770
Resfinder	CARD|phgb|AB061440|305-770|ARO:3002870|tet34|Tetracyclines|Tetracycline_inactivation_enzymes|TET34	tet(34)_1_AB061440
NCBI	ACou|AY136281.1|gene1|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|gyrB|RequiresSNPConfirmation	gi|28627815|gb|AY136281.1|1-2034 gi|24940583|gb|AF329398.1|40574-42291
NCBI	gi|675278057|gb|KJ911020.1|betalactams|Class_A_betalactamases|CTX	gi|675278059|gb|KJ911021.1|110-1044 gi|675278057|gb|KJ911020.1|112-1046
CARD	CARD|phgb|NC_003197|2039657-2040380|ARO:3000826|sdiA|Multi-drug_resistance|MDR_regulator|SDIA	@phgb|NC_003197|2039657-2040380|ARO:3000826|sdiA [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
NCBI	CARD|phgb|NC_003197|2039657-2040380|ARO:3000826|sdiA|Multi-drug_resistance|MDR_regulator|SDIA	gi|981191958|emb|LN999997.1|3383138-3382415 gi|973795115|gb|AE006468.2|2039655-2040378 gi|928084184|gb|CP012681.1|2033838-2034561 gi|821161554|gb|CP011428.1|2068127-2068850 gi|808186398|gb|CP007523.1|2771832-2772555 gi|777177758|emb|LN829401.1|886131-885408 gi|764057510|gb|CP007235.1|2771629-2772352 gi|674281104|gb|CP009102.1|1966269-1966992 gi|669110799|gb|CP007804.2|1941677-1942400 gi|661245796|dbj|AP014565.1|2165275-2165998
ARG-ANNOT	AGly|APH-Stph|HE579073|1778413-1779213|801|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)APH-Stph:HE579073:1778413-1779213:801
NCBI	AGly|APH-Stph|HE579073|1778413-1779213|801|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|984671414|emb|LT009690.1|1837728-1836928 gi|974697948|dbj|AP017320.1|1877070-1876270 gi|974161314|gb|CP012018.1|1956333-1955533 gi|974158397|gb|CP012015.1|1957054-1956254 gi|974155539|gb|CP012013.1|1965147-1964347 gi|974152716|gb|CP012012.1|1951103-1950303 gi|974149849|gb|CP012011.1|2008501-2007701 gi|941146344|gb|CP007676.1|1840856-1840056 gi|941142962|gb|CP007672.1|1839240-1838440 gi|941139768|gb|CP007657.1|1852930-1852130
CARD	gi|469518773|gb|JX173956.1|betalactams|Class_C_betalactamases|MOX	@phgb|JX173956|0-1152|ARO:3002190|MOX-8 [Aeromonas caviae]
Lahey	gi|469518773|gb|JX173956.1|betalactams|Class_C_betalactamases|MOX	AGH56079.1 JX173956.1:1-1152
NCBI	gi|469518773|gb|JX173956.1|betalactams|Class_C_betalactamases|MOX	gi|469518773|gb|JX173956.1|1-1152
ARG-ANNOT	751|AY618461.1|AY618461|Glycopeptides|VanA-type_resistance_protein|VANXA	(Gly)VanX-Ac2:AY618461:1756-2316:561
NCBI	751|AY618461.1|AY618461|Glycopeptides|VanA-type_resistance_protein|VANXA	gi|47834366|gb|AY618461.1|1756-2316
Resfinder	751|AY618461.1|AY618461|Glycopeptides|VanA-type_resistance_protein|VANXA	VanX-Ac2_7_AY618461
NCBI	ACou|CP004022.1|gene2481|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|529186758|gb|CP004022.1|2700831-2698936
ARG-ANNOT	Bla|cphA|AY261378|1-765|765|betalactams|Class_B_betalactamases|CPHA	(Bla)cphA:AY261378:1-765:765
NCBI	Bla|cphA|AY261378|1-765|765|betalactams|Class_B_betalactamases|CPHA	gi|33150467|gb|AY261378.1|1-765
Resfinder	Bla|cphA|AY261378|1-765|765|betalactams|Class_B_betalactamases|CPHA	cphA1_3_AY261378
CARD	Bla|OXA-144_1_FJ617207|betalactams|Class_D_betalactamases|OXA	@phgb|FJ617207|0-828|ARO:3001800|OXA-226 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-144_1_FJ617207|betalactams|Class_D_betalactamases|OXA	ACM67635.1 FJ617207.1:1-828
NCBI	Bla|OXA-144_1_FJ617207|betalactams|Class_D_betalactamases|OXA	gi|222820564|gb|FJ617207.1|1-828
Resfinder	Bla|OXA-144_1_FJ617207|betalactams|Class_D_betalactamases|OXA	blaOXA-144_1_FJ617207
ARG-ANNOT	Bla|CMY-66|JN714478|1035-2180|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-66:JN714478:1035-2180:1146
CARD	Bla|CMY-66|JN714478|1035-2180|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JN714478|1034-2180|ARO:3002079|CMY-66 [Citrobacter freundii]
Lahey	Bla|CMY-66|JN714478|1035-2180|1146|betalactams|Class_C_betalactamases|CMY	AEZ49849.1 JN714478.1:1035-2180
NCBI	Bla|CMY-66|JN714478|1035-2180|1146|betalactams|Class_C_betalactamases|CMY	gi|374414413|gb|JN714478.1|1035-2180
Resfinder	Bla|CMY-66|JN714478|1035-2180|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-66_1_JN714478
CARD	Fos|AP010904.1|gene1560|Fosfomycin|Fosfomycin_hydrases|FOSX	@phgb|AP010904|1708923-1709388|ARO:3000198|FosX [Desulfovibrio magneticus RS-1]
NCBI	Fos|AP010904.1|gene1560|Fosfomycin|Fosfomycin_hydrases|FOSX	gi|239794502|dbj|AP010904.1|1708924-1709388
NCBI	ACou|NC_010611.6235284|Aminocoumarins|Aminocoumarin-resistant_DNA_topoisomerases|PARE|RequiresSNPConfirmation	gi|183207914|gb|CP000863.1|3775297-3773411
CARD	CARD|phgb|KJ151292|294-2892|ARO:3000444|rifampin|Rifampin|Rifampin_phosphotransferase|RPH	@phgb|KJ151292|294-2892|ARO:3000444|rifampin phosphotransferase [Streptomyces sp. WAC4747]
NCBI	CARD|phgb|KJ151292|294-2892|ARO:3000444|rifampin|Rifampin|Rifampin_phosphotransferase|RPH	gi|636629760|gb|KJ151292.1|295-2893
CARD	CARD|phgb|AB091338|173-1355|ARO:3003551|emeA|Multi-drug_resistance|Multi-drug_efflux_pumps|EMEA	@phgb|AB091338|173-1355|ARO:3003551|emeA [Enterococcus faecalis ATCC 29212]
NCBI	CARD|phgb|AB091338|173-1355|ARO:3003551|emeA|Multi-drug_resistance|Multi-drug_efflux_pumps|EMEA	gi|22775586|dbj|AB091338.1|174-1355 gi|22775586|dbj|AB091338.1|593-632 gi|22775586|dbj|AB091338.1|620-659 gi|674288313|gb|CP008816.1|139221-139956 gi|674288313|gb|CP008816.1|138802-139260
CARD	AGly|U01945.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	@phgb|U01945|373-916|ARO:3002897|sat-4 [Campylobacter coli]
NCBI	AGly|U01945.1|gene1|Aminoglycosides|Aminoglycoside_N-acetyltransferases|SAT	gi|732997|gb|U01945.1|CCU01945|374-916 gi|388535180|gb|CP003585.1|66247-65833
CARD	CARD|phgb|AF227204|73-934|ARO:3001084|SHV-26|betalactams|Class_A_betalactamases|SHV	@phgb|AF227204|73-934|ARO:3001084|SHV-26 [Klebsiella pneumoniae]
NCBI	CARD|phgb|AF227204|73-934|ARO:3001084|SHV-26|betalactams|Class_A_betalactamases|SHV	gi|7109288|gb|AF227204.1|AF227204|74-935 gi|640850664|gb|CP007731.1|2546141-2545281 gi|562889810|gb|KF585139.1|48-908
ARG-ANNOT	Tet|TetQ|Z21523|362-2287|1926|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	(Tet)TetQ:Z21523:362-2287:1926
CARD	Tet|TetQ|Z21523|362-2287|1926|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	@phgb|Z21523|0-1974|ARO:3000191|tetQ [Bacteroides fragilis]
NCBI	Tet|TetQ|Z21523|362-2287|1926|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	gi|676287604|gb|KJ816753.1|79377-81350 gi|311358930|gb|HM561908.1|519-2492 gi|311358883|gb|HM561907.1|519-2492 gi|394758|emb|Z21523.1|314-2287
Resfinder	Tet|TetQ|Z21523|362-2287|1926|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETQ	tet(Q)_4_Z21523
CARD	CARD|phgb|AY853593|214-1075|ARO:3001002|TEM-138|betalactams|Class_A_betalactamases|TEM	@phgb|AY853593|214-1075|ARO:3001002|TEM-138 [Salmonella enterica]
NCBI	CARD|phgb|AY853593|214-1075|ARO:3001002|TEM-138|betalactams|Class_A_betalactamases|TEM	gi|695211221|ref|NG_036036.1|215-1076
CARD	CARD|phgb|EF526508|0-645|ARO:3002723|QnrB9|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|EF526508|0-645|ARO:3002723|QnrB9 [Citrobacter freundii]
NCBI	CARD|phgb|EF526508|0-645|ARO:3002723|QnrB9|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|157695006|gb|EU136184.1|37-681 gi|145617242|gb|EF526508.1|1-645
ARG-ANNOT	MLS|MphA|DQ445270|1626-2531|1230|MLS|Macrolide_phosphotransferases|MPHA	(MLS)MphA:DQ445270:1626-2531:1230
CARD	MLS|MphA|DQ445270|1626-2531|1230|MLS|Macrolide_phosphotransferases|MPHA	@phgb|AJ698325|6453-7359|ARO:3000316|mphA [uncultured bacterium]
NCBI	MLS|MphA|DQ445270|1626-2531|1230|MLS|Macrolide_phosphotransferases|MPHA	gi|970698242|gb|KT988020.1|5973-5068 gi|970698221|gb|KT988019.1|14502-13597 gi|970698093|gb|KT988018.1|3861-2956 gi|971888686|gb|KT884517.1|38759-39664 gi|971520763|gb|CP008715.1|89165-88260 gi|970338578|gb|KT725789.1|70430-71335 gi|966626646|gb|CP013657.1|5368-4463 gi|962562976|emb|LN624486.1|70175-69270 gi|929916870|gb|KR822247.1|34169-33264 gi|926539378|gb|CP012632.1|59026-59931
ARG-ANNOT	gi|428230271|gb|KC107824.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-139:KC107824:1-876:876
CARD	gi|428230271|gb|KC107824.1|betalactams|Class_A_betalactamases|CTX	@phgb|KC107824|0-876|ARO:3001997|CTX-M-139 [Escherichia coli]
Lahey	gi|428230271|gb|KC107824.1|betalactams|Class_A_betalactamases|CTX	AFY98865.1 KC107824.1:1-876
NCBI	gi|428230271|gb|KC107824.1|betalactams|Class_A_betalactamases|CTX	gi|428230271|gb|KC107824.1|1-876
Resfinder	gi|428230271|gb|KC107824.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-139_1_KC107824
NCBI	gi|151074|gb|M69058.1|PSEBETLAC|betalactams|Class_A_betalactamases|CARB	gi|800908878|gb|KP345882.1|99157-98041 gi|800908878|gb|KP345882.1|65883-65805 gi|777182157|emb|LN829403.1|70501-71617 gi|766547679|gb|KP116299.1|40674-41790 gi|766547679|gb|KP116299.1|20712-20795 gi|742994109|gb|CP010391.1|50897-49781 gi|704485843|gb|KJ186153.1|37177-38293 gi|686483924|gb|KM111262.1|22-1138 gi|675294670|dbj|AB985401.1|878-1994 gi|660573358|gb|CP008790.1|138968-140084 gi|660573358|gb|CP008790.1|155445-155524 gi|628945956|gb|KJ488985.1|12-1128 gi|618631222|gb|CP007581.1|4120474-4121590
ARG-ANNOT	Tet|TetG|AF133140|757-1932|1176|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	(Tet)TetG:AF133140:757-1932:1176
NCBI	Tet|TetG|AF133140|757-1932|1176|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	gi|828977575|gb|CP011649.1|65403-64228 gi|828916727|gb|CP011583.1|58463-59638 gi|828911534|gb|CP011580.1|65403-64228 gi|828895865|gb|CP011571.1|44905-46080 gi|700676355|gb|KM234279.1|32631-33806 gi|777182157|emb|LN829403.1|65949-67124 gi|761589803|dbj|AP014651.1|321550-320375 gi|761589803|dbj|AP014651.1|5297525-5298700 gi|704485843|gb|KJ186153.1|32625-33800 gi|704485786|gb|KJ186152.1|32631-33806 gi|674252391|gb|CP008739.2|6816855-6818030
Resfinder	Tet|TetG|AF133140|757-1932|1176|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	tet(G)_4_AF133140
Lahey	Bla|OXA-114_2_HM368375|betalactams|Class_D_betalactamases|OXA	ADO14462.1 HM368375.1:1-828
NCBI	Bla|OXA-114_2_HM368375|betalactams|Class_D_betalactamases|OXA	gi|777196577|emb|LN831029.1|4583884-4584711 gi|308097802|gb|HM368375.1|1-828
Resfinder	Bla|OXA-114_2_HM368375|betalactams|Class_D_betalactamases|OXA	blaOXA-114_2_HM368375
NCBI	Bla|SHV-1_3_X98098|betalactams|Class_A_betalactamases|SHV	gi|2113854|emb|X98098.1|74-934
Resfinder	Bla|SHV-1_3_X98098|betalactams|Class_A_betalactamases|SHV	blaSHV-1_3_X98098
CARD	gi|40737711|gb|AY368237.1|betalactams|Class_A_betalactamases|TEM	@phgb|AY368237|0-861|ARO:3000990|TEM-128 [Escherichia coli]
Lahey	gi|40737711|gb|AY368237.1|betalactams|Class_A_betalactamases|TEM	AAR89359.1 AY368237.1:1-861
NCBI	gi|40737711|gb|AY368237.1|betalactams|Class_A_betalactamases|TEM	gi|695210348|ref|NG_035933.1|1-861
ARG-ANNOT	67|AF047479.2|AF047479|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Ia:M18967:757-1314:558
CARD	67|AF047479.2|AF047479|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|M18967|756-1314|ARO:3002545|AAC(6')-Ia [Plasmid R]
NCBI	67|AF047479.2|AF047479|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|575771387|dbj|AB901039.1|980-1537 gi|575771381|dbj|AB901038.1|1590-2147 gi|296172990|emb|FN825254.1|25715-25158 gi|213958578|gb|AF047479.2|2187-2744 gi|42543942|dbj|AB116723.1|2351-2908 gi|42391697|dbj|AB116260.1|2351-2908 gi|40645552|dbj|AB113580.1|2351-2908 gi|695208234|ref|NG_035502.1|1331-1888 gi|150871|gb|M18967.1|PRCAADA|757-1314
Resfinder	67|AF047479.2|AF047479|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Ia_1_M18967
NCBI	Gly|VanA-C_4_EU151753|Glycopeptides|VanC-type_resistance_protein|VANC	gi|161779851|gb|EU151753.1|29-1081
Resfinder	Gly|VanA-C_4_EU151753|Glycopeptides|VanC-type_resistance_protein|VANC	VanC_4_EU151753
ARG-ANNOT	Bla|OXA-243a|JX206446|1-828|828|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-243a:JX206446:1-828:828
CARD	Bla|OXA-243a|JX206446|1-828|828|betalactams|Class_D_betalactamases|OXA	@phgb|JX206446|0-828|ARO:3001610|OXA-243 [Achromobacter xylosoxidans]
Lahey	Bla|OXA-243a|JX206446|1-828|828|betalactams|Class_D_betalactamases|OXA	AFQ90085.1 JX206446.1:1-828
NCBI	Bla|OXA-243a|JX206446|1-828|828|betalactams|Class_D_betalactamases|OXA	gi|402694352|gb|JX206446.1|1-828
Resfinder	Bla|OXA-243a|JX206446|1-828|828|betalactams|Class_D_betalactamases|OXA	blaOXA-243_1_JX206446
CARD	gi|66576191|gb|DQ054528.1|betalactams|Class_A_betalactamases|SHV	@phgb|AJ863560|0-861|ARO:3001111|SHV-55 [Klebsiella pneumoniae]
Lahey	gi|66576191|gb|DQ054528.1|betalactams|Class_A_betalactamases|SHV	AAY51674.1 DQ054528.1:1-861
NCBI	gi|66576191|gb|DQ054528.1|betalactams|Class_A_betalactamases|SHV	gi|66576191|gb|DQ054528.1|1-861
Resfinder	gi|66576191|gb|DQ054528.1|betalactams|Class_A_betalactamases|SHV	blaSHV-55_1_DQ054528
NCBI	Rif|JX028276.1|gene31|Rifampin|Rifampin_glycosyltransferase|RGT	gi|397529824|gb|JX028276.1|36821-35586
ARG-ANNOT	Bla|CMY-48|HM569226|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-48:HM569226:1040-2185:1146
CARD	Bla|CMY-48|HM569226|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	@phgb|HM569226|1039-2185|ARO:3002059|CMY-48 [Citrobacter freundii]
Lahey	Bla|CMY-48|HM569226|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	ADP02979.1 HM569226.2:1040-2185
NCBI	Bla|CMY-48|HM569226|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	gi|828983113|gb|CP011657.1|2365948-2367093 gi|828940051|gb|CP011612.1|3646139-3644994 gi|347364916|gb|HM569226.2|1040-2185
Resfinder	Bla|CMY-48|HM569226|1040-2185|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-48_1_HM569226
ARG-ANNOT	1251|EU571228.1|EU571228|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-133:EU571228:823-1644:825
CARD	1251|EU571228.1|EU571228|betalactams|Class_D_betalactamases|OXA	@phgb|EU571228|822-1644|ARO:3001702|OXA-133 [Acinetobacter radioresistens]
Lahey	1251|EU571228.1|EU571228|betalactams|Class_D_betalactamases|OXA	ACE63186.1 EU571228.1:823-1644
NCBI	1251|EU571228.1|EU571228|betalactams|Class_D_betalactamases|OXA	gi|190148187|gb|EU571228.1|823-1644
Resfinder	1251|EU571228.1|EU571228|betalactams|Class_D_betalactamases|OXA	blaOXA-133_1_EU571228
ARG-ANNOT	Bla|OXY2-2|AJ871867|1-873|873|betalactams|Class_A_betalactamases|OXY	(Bla)OXY2-2:AJ871867:1-873:873
CARD	Bla|OXY2-2|AJ871867|1-873|873|betalactams|Class_A_betalactamases|OXY	@phgb|AF473577|0-873|ARO:3002397|OXY-2-2 [Klebsiella oxytoca]
NCBI	Bla|OXY2-2|AJ871867|1-873|873|betalactams|Class_A_betalactamases|OXY	gi|18845079|gb|AF473577.1|184-1056 gi|60416700|emb|AJ871867.1|1-873
Resfinder	Bla|OXY2-2|AJ871867|1-873|873|betalactams|Class_A_betalactamases|OXY	blaOXY-2-2_2_AJ871867
CARD	CARD|phgb|AE004091.2|4120468-4121107|ARO:3003710|mexL|Multi-drug_resistance|MDR_regulator|MEXL	@phgb|AE004091.2|4120468-4121107|ARO:3003710|mexL [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|AE004091.2|4120468-4121107|ARO:3003710|mexL|Multi-drug_resistance|MDR_regulator|MEXL	gi|984355403|gb|CP008872.1|1683025-1682387 gi|982189197|gb|CP013993.1|1602443-1601805 gi|974353108|gb|CP008870.1|903269-902631 gi|974327848|gb|CP008866.1|2092063-2092701 gi|974319461|gb|CP008865.1|4197840-4197202 gi|974249602|gb|CP008856.1|1453407-1454045 gi|971497891|gb|CP012901.1|5419825-5420463 gi|954630252|gb|CP013245.1|830642-831280 gi|946706141|emb|LN870292.1|1404050-1403412 gi|927993303|gb|CP012679.1|1429009-1428371
Resfinder	Fos|fosA_7_NZ_AFBO01000747|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_7_NZ_AFBO01000747
ARG-ANNOT	1002|AF140221.1|AF140221|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Iz:AF140221:390-851:462
CARD	1002|AF140221.1|AF140221|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AF140221|389-851|ARO:3002570|AAC(6')-Iz [Stenotrophomonas maltophilia]
NCBI	1002|AF140221.1|AF140221|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|5821732|gb|AF140221.1|AF140221|390-851
Resfinder	1002|AF140221.1|AF140221|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iz_1_AF140221
NCBI	Bla|cepA_1_L13472|betalactams|Class_A_betalactamases|CEPA	gi|307075858|emb|FR688023.1|1-903 gi|437319|gb|L13472.1|BNRCEPA|436-1338
Resfinder	Bla|cepA_1_L13472|betalactams|Class_A_betalactamases|CEPA	cepA_1_L13472
NCBI	gi|6176545|gb|AF190694.1|betalactams|Class_A_betalactamases|TEM	gi|6176545|gb|AF190694.1|AF190694|1-1103 gi|961666360|gb|KT185451.1|87734-87690
CARD	Bla|AB008454.1|gene1|betalactams|Class_C_betalactamases|SRT	@phgb|AB008454|153-1290|ARO:3002493|SRT-1 [Serratia marcescens]
NCBI	Bla|AB008454.1|gene1|betalactams|Class_C_betalactamases|SRT	gi|2575871|dbj|AB008454.1|154-1290
NCBI	Bla|SHV-62_2_GU064395|betalactams|Class_A_betalactamases|SHV	gi|262477944|gb|GU064395.1|1-861
Resfinder	Bla|SHV-62_2_GU064395|betalactams|Class_A_betalactamases|SHV	blaSHV-62_2_GU064395
ARG-ANNOT	Bla|HERA-8|AJ536092|1-873|873|betalactams|Class_A_betalactamases|HERA	(Bla)HERA-8:AJ536092:1-873:873
NCBI	Bla|HERA-8|AJ536092|1-873|873|betalactams|Class_A_betalactamases|HERA	gi|27805139|emb|AJ536092.1|1-873
Resfinder	Bla|HERA-8|AJ536092|1-873|873|betalactams|Class_A_betalactamases|HERA	blaHERA-8_1_AJ536092
ARG-ANNOT	469|AJ006275.1|AJ006275|betalactams|Class_A_betalactamases|CME	(Bla)CME-1:AJ006275:72-959:888
NCBI	469|AJ006275.1|AJ006275|betalactams|Class_A_betalactamases|CME	gi|5851939|emb|AJ006275.1|72-959
Resfinder	469|AJ006275.1|AJ006275|betalactams|Class_A_betalactamases|CME	blaCME-1_1_AJ006275
NCBI	261|AY264780.2|AY264780|Tetracyclines|Tetracycline_transcriptional_repressor|TETR|RequiresSNPConfirmation	gi|117380087|gb|AY264780.2|3071-3712
CARD	CARD|pvgb|NC_002952|1427046-1429569|ARO:3003319|Staphylococcus|Lipopeptides|Phosphotidylglycerol_lysyltransferase|MPRF|RequiresSNPConfirmation	@pvgb|NC_002952|1427046-1429569|ARO:3003319|Staphylococcus aureus mprF mutations conferring resistance to daptomycin [Staphylococcus aureus subsp. aureus MRSA252]
NCBI	CARD|pvgb|NC_002952|1427046-1429569|ARO:3003319|Staphylococcus|Lipopeptides|Phosphotidylglycerol_lysyltransferase|MPRF|RequiresSNPConfirmation	gi|703576232|gb|CP009554.1|1400602-1403125 gi|701162461|emb|LN626917.1|1050817-1048294 gi|685631213|gb|CP009361.1|1353219-1355742 gi|532126991|gb|CP002388.1|1296210-1298733 gi|312436391|gb|CP002110.1|1958422-1955899 gi|49240382|emb|BX571856.1|1427047-1429570
ARG-ANNOT	Bla|LEN-3|AY130286|1-823|823|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-3:AY130286:1-823:823
CARD	Bla|LEN-3|AY130286|1-823|823|betalactams|Class_A_betalactamases|LEN	@phgb|AY130286|0-822|ARO:3002475|LEN-3 [Klebsiella pneumoniae]
NCBI	Bla|LEN-3|AY130286|1-823|823|betalactams|Class_A_betalactamases|LEN	gi|28192517|gb|AY130286.1|1-823
ARG-ANNOT	Bla|TEM-1D|AF188200|215-1075|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-1D:AF188200:215-1075:861
NCBI	Bla|TEM-1D|AF188200|215-1075|861|betalactams|Class_A_betalactamases|TEM	gi|984881271|gb|CP014215.1|999063-999923 gi|974022331|gb|CP013924.1|2769188-2768328 gi|944398239|gb|CP013025.1|2338321-2339181 gi|909010439|gb|JN247441.4|51300-52160 gi|827403829|gb|CP010779.1|2717384-2716524 gi|817614502|gb|KF483599.2|66039-66899 gi|800908368|gb|KM406488.1|6410-5550 gi|803657307|gb|CP007535.2|3834893-3834033 gi|730910660|gb|KM921776.1|39924-40784 gi|695934953|gb|CP007636.1|37385-38245
Resfinder	Bla|TEM-1D|AF188200|215-1075|861|betalactams|Class_A_betalactamases|TEM	blaTEM-1D_83_AF188200
NCBI	1205|JN086160.1|JN086160|MLS|23S_rRNA_methyltransferases|ERMF	gi|859808409|gb|KP265722.1|13238-14038 gi|356668588|gb|JN086160.1|580-1380 gi|324316725|gb|CP002530.1|2982575-2983375
ARG-ANNOT	CARD|phgb|BR000038|0-237|ARO:3003021|dfrB2|Trimethoprim|Dihydrofolate_reductase|DFRB	(Tmt)DfrB2:AY139592:809-1045:237
CARD	CARD|phgb|BR000038|0-237|ARO:3003021|dfrB2|Trimethoprim|Dihydrofolate_reductase|DFRB	@phgb|BR000038|0-237|ARO:3003021|dfrB2 [Escherichia coli]
NCBI	CARD|phgb|BR000038|0-237|ARO:3003021|dfrB2|Trimethoprim|Dihydrofolate_reductase|DFRB	gi|901703463|gb|KR071147.1|4936-5172 gi|836714861|gb|KP899259.1|2837-3073 gi|613478056|gb|KJ158160.1|122-358 gi|576866955|gb|KF813062.1|9448-9684 gi|576866945|gb|KF813060.1|512-748 gi|572353763|gb|KF771027.1|122-358 gi|558550304|gb|KF532963.1|7947-8183 gi|558550275|gb|KF532959.1|9472-9708 gi|558550247|gb|KF532953.1|809-573 gi|530537828|gb|KC848883.1|1067-831
Resfinder	CARD|phgb|BR000038|0-237|ARO:3003021|dfrB2|Trimethoprim|Dihydrofolate_reductase|DFRB	dfrB2_1_DQ839391
CARD	Bla|KJ135345.1|gene1|betalactams|Class_D_betalactamases|OXA	@phgb|KJ135345|14-839|ARO:3001568|OXA-382 [Acinetobacter baumannii]
Lahey	Bla|KJ135345.1|gene1|betalactams|Class_D_betalactamases|OXA	AHL30286.1 KJ135345.1:15-839
NCBI	Bla|KJ135345.1|gene1|betalactams|Class_D_betalactamases|OXA	gi|591389169|gb|KJ135345.1|15-839
CARD	Phe|AF231986|Phenicol|Phenicol_efflux_pumps|FLOR	@phgb|AF231986|3307-4522|ARO:3002705|floR [Escherichia coli]
NCBI	Phe|AF231986|Phenicol|Phenicol_efflux_pumps|FLOR	gi|928083869|gb|CP012682.1|108397-107183 gi|821166120|gb|CP011429.1|23556-24770 gi|778408205|gb|CP009412.2|26357-27571 gi|778408013|gb|CP009411.2|25529-26743 gi|696586546|gb|CP009564.1|82497-83711 gi|696586053|gb|CP009563.1|5053-6267 gi|696585773|gb|CP009562.1|82901-84115 gi|696581286|gb|CP009560.1|117667-118881 gi|695936401|gb|CP009570.1|47665-46451 gi|695935254|gb|CP009567.1|51363-50149
CARD	Mdr|NC_002516.2.877855|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXA	@phgb|NC_002516|472023-473175|ARO:3000377|mexA [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.877855|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXA	gi|974359204|gb|CP008871.1|5483990-5482839 gi|974347073|gb|CP008869.1|5634863-5633712 gi|974341323|gb|CP008868.1|2129443-2130594 gi|974282928|gb|CP008861.1|3256730-3255579 gi|926451317|emb|LN871187.1|472028-473179 gi|675286744|emb|HG974234.1|6379619-6380770 gi|553895034|gb|CP006832.1|472024-473175 gi|553886202|gb|CP006831.1|472024-473175 gi|543879514|gb|CP006705.1|471900-473051 gi|110227054|gb|AE004091.2|472024-473175
NCBI	MLS|mefA_10_AF376746|MLS|Macrolide_resistance_efflux_pumps|MEFA	gi|909837468|gb|CP003357.2|1841917-1840700 gi|815827235|emb|LN812955.1|5946-7163 gi|698841295|emb|LK020698.1|7706-8923 gi|698841236|emb|LK020697.1|36073-34856 gi|556027507|gb|CP006844.1|1764728-1763511 gi|341932553|gb|CP002925.1|269318-268101 gi|321157379|emb|FR671415.1|21081-19864 gi|321157336|emb|FR671413.1|18233-17016 gi|298237097|gb|CP001993.1|2026415-2025198 gi|283440973|gb|CP001849.1|987304-988521
Resfinder	MLS|mefA_10_AF376746|MLS|Macrolide_resistance_efflux_pumps|MEFA	mef(A)_10_AF376746
ARG-ANNOT	gi|110350793|emb|AM286274.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-137:AM286274:1-861:861
CARD	gi|110350793|emb|AM286274.1|betalactams|Class_A_betalactamases|TEM	@phgb|AM286274|0-861|ARO:3001001|TEM-137 [Shigella sonnei]
Lahey	gi|110350793|emb|AM286274.1|betalactams|Class_A_betalactamases|TEM	CAL08007.1 AM286274.1:1-861
NCBI	gi|110350793|emb|AM286274.1|betalactams|Class_A_betalactamases|TEM	gi|110350793|emb|AM286274.1|1-861
Resfinder	gi|110350793|emb|AM286274.1|betalactams|Class_A_betalactamases|TEM	blaTEM-137_1_AM286274
ARG-ANNOT	Bla|TEM-166|FJ197316|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-166:FJ197316:1-861:861
CARD	Bla|TEM-166|FJ197316|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|FJ197316|0-861|ARO:3001032|TEM-166 [Escherichia coli]
Lahey	Bla|TEM-166|FJ197316|1-861|861|betalactams|Class_A_betalactamases|TEM	ACI25375.1 FJ197316.1:1-861
NCBI	Bla|TEM-166|FJ197316|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|207849086|gb|FJ197316.1|1-861
Resfinder	Bla|TEM-166|FJ197316|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-166_1_FJ197316
NCBI	gi|614461914|gb|KJ020573.1|betalactams|Class_A_betalactamases|CTX	gi|695228197|ref|NG_041750.1|1-1254 gi|529205529|gb|KC788405.1|41529-41384
ARG-ANNOT	Bla|CMY-26|AB300358|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-26:AB300358:1-1146:1146
CARD	Bla|CMY-26|AB300358|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|AB300358|0-1146|ARO:3002037|CMY-26 [Klebsiella oxytoca]
Lahey	Bla|CMY-26|AB300358|1-1146|1146|betalactams|Class_C_betalactamases|CMY	BAF56185.1 AB300358.1:1-1146
NCBI	Bla|CMY-26|AB300358|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|144226029|dbj|AB300358.1|1-1146
Resfinder	Bla|CMY-26|AB300358|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-26_1_AB300358
ARG-ANNOT	1114|EU670845.2|EU670845|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-138:EU670845:1-828:828
CARD	1114|EU670845.2|EU670845|betalactams|Class_D_betalactamases|OXA	@phgb|EU670845|1594-2419|ARO:3001655|OXA-138 [Acinetobacter nosocomialis]
Lahey	1114|EU670845.2|EU670845|betalactams|Class_D_betalactamases|OXA	ACD45467.1 EU670845.2:1595-2419
NCBI	1114|EU670845.2|EU670845|betalactams|Class_D_betalactamases|OXA	gi|238685467|gb|EU670845.2|1595-2419
Resfinder	1114|EU670845.2|EU670845|betalactams|Class_D_betalactamases|OXA	blaOXA-138_1_EU670845
ARG-ANNOT	1905|AJ584652.2|AJ584652|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-16:AJ584652:1044-1784:741
CARD	1905|AJ584652.2|AJ584652|betalactams|Class_B_betalactamases|IMP	@phgb|AJ584652|1043-1784|ARO:3002207|IMP-16 [Pseudomonas aeruginosa]
Lahey	1905|AJ584652.2|AJ584652|betalactams|Class_B_betalactamases|IMP	CAE48334.1 AJ584652.2:1044-1784
NCBI	1905|AJ584652.2|AJ584652|betalactams|Class_B_betalactamases|IMP	gi|37653301|emb|AJ584652.2|1044-1784
Resfinder	1905|AJ584652.2|AJ584652|betalactams|Class_B_betalactamases|IMP	blaIMP-16_1_AJ584652
CARD	gi|256862197|gb|GQ390806.1|betalactams|Class_A_betalactamases|SHV	@phgb|GQ390806|0-813|ARO:3001171|SHV-124 [Klebsiella pneumoniae]
NCBI	gi|256862197|gb|GQ390806.1|betalactams|Class_A_betalactamases|SHV	gi|256862197|gb|GQ390806.1|1-813
ARG-ANNOT	Tmt|DfrA15|JN108895|93-551|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	(Tmt)DfrA15:JN108895:93-551:474
NCBI	Tmt|DfrA15|JN108895|93-551|474|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|970861142|gb|KT449571.1|94-552 gi|944545011|gb|KR868993.1|105-563 gi|924421174|gb|KP998196.1|69-527 gi|751372775|gb|KM823524.1|125-583 gi|726966106|gb|KM386400.1|134-592 gi|726966104|gb|KM386399.1|134-592 gi|659224521|gb|KJ668708.1|249-707 gi|633894420|emb|HG918041.1|151287-150829 gi|563324876|gb|KF534911.1|55-513 gi|481190437|gb|JX121641.1|52276-52734
NCBI	Bla|EU408358.1|gene24|betalactams|Class_B_betalactamases|LRA	gi|169647660|gb|EU408358.1|28439-27459
ARG-ANNOT	Tet|Tet-33|AJ420072|22940-24163|1224|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET33	(Tet)Tet-33:AJ420072:22940-24163:1224
CARD	Tet|Tet-33|AJ420072|22940-24163|1224|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET33	@phgb|AJ420072|0-1224|ARO:3000478|tet33 [Corynebacterium glutamicum]
NCBI	Tet|Tet-33|AJ420072|22940-24163|1224|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET33	gi|37993850|gb|AY255627.1|362-1585 gi|17059596|emb|AJ420072.1|22940-24163
Resfinder	Tet|Tet-33|AJ420072|22940-24163|1224|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TET33	tet(33)_2_AY255627
ARG-ANNOT	Bla|CMY-22|DQ256079|1-1146|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-22:DQ256079:1-1146:1146
CARD	Bla|CMY-22|DQ256079|1-1146|1146|betalactams|Class_C_betalactamases|CMY	@phgb|DQ256079|0-1146|ARO:3002033|CMY-22 [Escherichia coli]
Lahey	Bla|CMY-22|DQ256079|1-1146|1146|betalactams|Class_C_betalactamases|CMY	ABB72431.1 DQ256079.1:1-1146
NCBI	Bla|CMY-22|DQ256079|1-1146|1146|betalactams|Class_C_betalactamases|CMY	gi|82395021|gb|DQ256079.1|1-1146
Resfinder	Bla|CMY-22|DQ256079|1-1146|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-22_1_DQ256079
NCBI	Bla|OXA-51_11_EU255288|betalactams|Class_D_betalactamases|OXA	gi|160623381|gb|EU255288.1|1-825
Resfinder	Bla|OXA-51_11_EU255288|betalactams|Class_D_betalactamases|OXA	blaOXA-51_11_EU255288
ARG-ANNOT	1327|AF010416.1|AF010416|betalactams|Class_A_betalactamases|VEB	(Bla)VEB-1:DQ393569:1955-2854:900
Lahey	1327|AF010416.1|AF010416|betalactams|Class_A_betalactamases|VEB	AAD01435.1 AF010416.1:164-1063
NCBI	1327|AF010416.1|AF010416|betalactams|Class_A_betalactamases|VEB	gi|970567976|dbj|LC107425.1|937-1836 gi|695226212|ref|NG_041455.1|4022-4921 gi|695226656|ref|NG_041554.1|3231-4130 gi|260677483|gb|GQ388247.1|6461-7360 gi|169147133|emb|CU459141.1|3661636-3660737 gi|88702677|gb|DQ393569.1|1955-2854 gi|45359798|gb|AY536743.1|1626-2525 gi|12655809|gb|AF220758.1|AF220758|47-946 gi|695200081|ref|NG_035375.1|3553-4452 gi|4102199|gb|AF010416.1|AF010416|164-1063
Resfinder	1327|AF010416.1|AF010416|betalactams|Class_A_betalactamases|VEB	blaVEB-1_3_DQ393569
CARD	CARD|phgb|KP109676|0-1026|ARO:3003718|MSI-1|betalactams|Class_B_betalactamases|MSI	@phgb|KP109676|0-1026|ARO:3003718|MSI-1 [Massilia sp. SB1-3]
NCBI	CARD|phgb|KP109676|0-1026|ARO:3003718|MSI-1|betalactams|Class_B_betalactamases|MSI	gi|762020393|gb|KP109676.1|1-1026
NCBI	gi|336318752|gb|JF780936.1|betalactams|Class_C_betalactamases|CMY	gi|336318752|gb|JF780936.1|1-1226
NCBI	Elf|NC_011595.7072242|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|213985689|gb|CP001172.1|2920267-2919563
CARD	CARD|phgb|KF152885|29328-29820|ARO:3002639|APH3-DPRIME-Ib|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	@phgb|KF152885|29328-29820|ARO:3002639|APH(3'')-Ib [Escherichia coli]
NCBI	CARD|phgb|KF152885|29328-29820|ARO:3002639|APH3-DPRIME-Ib|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-DPRIME	gi|984686374|gb|HQ700358.2|19505-19997 gi|974751547|gb|KU130294.1|218806-219298 gi|974751143|gb|KU238092.1|9309-9801 gi|981191958|emb|LN999997.1|2510228-2509736 gi|975007785|gb|CP010832.1|2825-3317 gi|954666075|gb|KT962845.1|17908-18400 gi|971497891|gb|CP012901.1|3692593-3692101 gi|971493847|gb|CP010351.1|34258-33766 gi|971339514|gb|CP006662.2|53242-53734 gi|943457735|gb|KT818627.1|108944-109436
CARD	Mdr|NC_002516.2.882884|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXF	@phgb|NC_002516|2810008-2813197|ARO:3000804|mexF [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.882884|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXF	gi|926451317|emb|LN871187.1|2705831-2702643 gi|553895034|gb|CP006832.1|2810004-2813192 gi|553886202|gb|CP006831.1|2810004-2813192 gi|110227054|gb|AE004091.2|2810009-2813197
NCBI	gi|161367441|gb|EU274580.1|betalactams|Class_A_betalactamases|TEM	gi|695213005|ref|NG_036534.1|1-1075
NCBI	Tet|tetG_5_AF071555|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	gi|828977575|gb|CP011649.1|65355-64228 gi|828916727|gb|CP011583.1|58511-59638 gi|828911534|gb|CP011580.1|65355-64228 gi|828895865|gb|CP011571.1|44953-46080 gi|700676355|gb|KM234279.1|32679-33806 gi|777182157|emb|LN829403.1|65997-67124 gi|761589803|dbj|AP014651.1|321502-320375 gi|761589803|dbj|AP014651.1|5297573-5298700 gi|704485843|gb|KJ186153.1|32673-33800 gi|704485786|gb|KJ186152.1|32679-33806 gi|674252391|gb|CP008739.2|6816903-6818030
Resfinder	Tet|tetG_5_AF071555|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETG	tet(G)_5_AF071555
CARD	CARD|phgb|X74325|645-1908|ARO:3002656|APH4-Ib|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH4	@phgb|X74325|645-1908|ARO:3002656|APH(4)-Ib [Burkholderia pseudomallei]
NCBI	CARD|phgb|X74325|645-1908|ARO:3002656|APH4-Ib|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH4	gi|439726|emb|X74325.1|646-1909
CARD	Bla|AB900900.1|gene1|betalactams|Class_A_betalactamases|CTX	@phgb|AB900900|0-876|ARO:3001994|CTX-M-137 [Escherichia coli]
Lahey	Bla|AB900900.1|gene1|betalactams|Class_A_betalactamases|CTX	BAO37256.1 AB900900.1:1-876
NCBI	Bla|AB900900.1|gene1|betalactams|Class_A_betalactamases|CTX	gi|594191624|gb|KF790923.2|3867-4742 gi|573461382|dbj|AB900900.1|1-876
NCBI	Sul|sul1_25_AY878717|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|695211314|ref|NG_036058.1|3503-4342
Resfinder	Sul|sul1_25_AY878717|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_25_AY878717
NCBI	gi|270266459|gb|GU186044.1|betalactams|Class_B_betalactamases|IND	gi|270266459|gb|GU186044.1|1-849
NCBI	Bla|TEM-52C_2_EF141186|betalactams|Class_A_betalactamases|TEM	gi|909636667|emb|LN850164.1|64082-63222 gi|667695876|gb|CP008734.1|10552-11412 gi|665823426|gb|KJ484639.1|63013-62153 gi|695224107|ref|NG_041019.1|877-1737 gi|695212177|ref|NG_036345.1|3944-4804 gi|58615621|gb|AY883411.1|167-1027
Resfinder	Bla|TEM-52C_2_EF141186|betalactams|Class_A_betalactamases|TEM	blaTEM-52C_2_EF141186
NCBI	AGly|M86913.1|gene4|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|155023|gb|M86913.1|TRNTN21CAS|2775-3332
NCBI	gi|472863|emb|Z28968.1|betalactams|Class_A_betalactamases|SME	gi|472863|emb|Z28968.1|1-1211 gi|510203|emb|Z30237.1|222-1
CARD	Bla|X65253.1|gene1|betalactams|Class_A_betalactamases|TEM	@phgb|X65253|175-1036|ARO:3000894|TEM-24 [Klebsiella pneumoniae]
Lahey	Bla|X65253.1|gene1|betalactams|Class_A_betalactamases|TEM	CAA46345.1 X65253.1:176-1036
NCBI	Bla|X65253.1|gene1|betalactams|Class_A_betalactamases|TEM	gi|296953|emb|X65253.1|176-1036
NCBI	Mdr|NC_002516.2.877857|Multi-drug_resistance|MDR_regulator|MEXR|RequiresSNPConfirmation	gi|984361056|gb|CP008873.1|899385-899828 gi|984355403|gb|CP008872.1|754374-753931 gi|974347073|gb|CP008869.1|5635138-5635581 gi|974341323|gb|CP008868.1|2129168-2128725 gi|974335511|gb|CP008867.1|2960726-2960283 gi|974327848|gb|CP008866.1|2997707-2998150 gi|974319461|gb|CP008865.1|3252157-3251714 gi|974298776|gb|CP008864.1|6029619-6029176 gi|974282928|gb|CP008861.1|3257005-3257448 gi|974275390|gb|CP008860.1|1705023-1704580
CARD	CARD|phgb|EU408349|107-1025|ARO:3002487|LRA-8|betalactams|Class_B_betalactamases|LRA	@phgb|EU408349|107-1025|ARO:3002487|LRA-8 [uncultured bacterium BLR8]
NCBI	CARD|phgb|EU408349|107-1025|ARO:3002487|LRA-8|betalactams|Class_B_betalactamases|LRA	gi|169647635|gb|EU408349.1|108-1026
ARG-ANNOT	gi|168740380|emb|AM231720.2|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-100:AM231720:1-825:825
CARD	gi|168740380|emb|AM231720.2|betalactams|Class_D_betalactamases|OXA	@phgb|AM231720|0-825|ARO:3001438|OXA-100 [Acinetobacter baumannii]
Lahey	gi|168740380|emb|AM231720.2|betalactams|Class_D_betalactamases|OXA	CAJ77817.2 AM231720.2:1-825
NCBI	gi|168740380|emb|AM231720.2|betalactams|Class_D_betalactamases|OXA	gi|478486900|gb|JX499236.1|1715-2539 gi|168740380|emb|AM231720.2|1-825
Resfinder	gi|168740380|emb|AM231720.2|betalactams|Class_D_betalactamases|OXA	blaOXA-100_1_AM231720
CARD	505|AJ308331.1|AJ308331|betalactams|Class_B_betalactamases|CAU	@phgb|AJ308331|0-870|ARO:3000855|CAU-1 beta-lactamase [Caulobacter vibrioides]
NCBI	505|AJ308331.1|AJ308331|betalactams|Class_B_betalactamases|CAU	gi|21425613|emb|AJ308331.1|1-870
NCBI	Tmt|U43152.1|gene1|Trimethoprim|Dihydrofolate_reductase|DFRD	gi|508787714|gb|KC456362.1|6471-6990 gi|1150986|gb|U43152.1|LMU43152|63-582 gi|1244654|gb|U40997.1|LMU40997|2158-2677
ARG-ANNOT	Gly|VanS-Pt|AY926880|1391-2551|1461|Glycopeptides|VanA-type_regulator|VANSA	(Gly)VanS-Pt:AY926880:1391-2551:1461
NCBI	Gly|VanS-Pt|AY926880|1391-2551|1461|Glycopeptides|VanA-type_regulator|VANSA	gi|257412320|gb|AY926880.2|1391-2551
Resfinder	Gly|VanS-Pt|AY926880|1391-2551|1461|Glycopeptides|VanA-type_regulator|VANSA	VanS-Pt2_4_AY926880
NCBI	Tet|tetM_6_M21136|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|153114|gb|M21136.1|STATETM|458-2377
Resfinder	Tet|tetM_6_M21136|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_6_M21136
CARD	CARD|phgb|AF253562|2978-3713|ARO:3000002|vanW|Glycopeptides|VanG-type_accessory_protein|VANWG	@phgb|AF253562|2978-3713|ARO:3000002|vanW [Enterococcus faecalis]
NCBI	CARD|phgb|AF253562|2978-3713|ARO:3000002|vanW|Glycopeptides|VanG-type_accessory_protein|VANWG	gi|9718996|gb|AF253562.2|AF253562|2979-3713
ARG-ANNOT	605|V01547.1|V01547|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	(AGly)Aph3-III:V01547:535-1329:795
CARD	605|V01547.1|V01547|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	@phgb|CP004067|52914-53709|ARO:3002647|APH(3')-IIIa [Campylobacter coli CVM N29710]
NCBI	605|V01547.1|V01547|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	gi|975002886|gb|CP013996.1|42127-41333 gi|974161314|gb|CP012018.1|407833-408627 gi|974158397|gb|CP012015.1|407840-408634 gi|974155539|gb|CP012013.1|408882-409676 gi|974152716|gb|CP012012.1|408043-408837 gi|974149849|gb|CP012011.1|453883-454677 gi|409032404|gb|JQ407082.1|6185-5391 gi|969943237|gb|KT365905.1|5748-4954 gi|946578471|gb|KT373982.1|1214-420 gi|948351829|gb|CP013117.1|1293-2087
Resfinder	605|V01547.1|V01547|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH3-PRIME	aph(3')-III_1_M26832
CARD	CARD|pvgb|CP003248|4240040-4243325|ARO:3003327|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBC|RequiresSNPConfirmation	@pvgb|CP003248|4240040-4243325|ARO:3003327|Mycobacterium tuberculosis mutant embC conferring resistance to ethambutol [Mycobacterium tuberculosis H37Rv]
NCBI	CARD|pvgb|CP003248|4240040-4243325|ARO:3003327|Mycobacterium|Mycobacterium_tuberculosis-specific_Drug|Ethambutol_resistant_arabinosyltransferase|EMBC|RequiresSNPConfirmation	gi|984950177|gb|CP010330.1|4250238-4253523 gi|984945858|gb|CP010329.1|4256967-4260252 gi|749193065|gb|CP007027.1|4239243-4242528 gi|737516150|dbj|AP014573.1|4243460-4246745 gi|690310687|gb|CP009480.1|4232272-4235557 gi|631902218|gb|KJ571506.1|1-3286 gi|631902216|gb|KJ571505.1|1-3286 gi|631902212|gb|KJ571503.1|1-3286 gi|631902210|gb|KJ571502.1|1-3286 gi|631902208|gb|KJ571501.1|1-3286
CARD	gi|694179059|gb|KM211509.1|betalactams|Class_A_betalactamases|CTX	@phgb|KM211509|0-876|ARO:3003164|CTX-M-156 [Klebsiella pneumoniae]
Lahey	gi|694179059|gb|KM211509.1|betalactams|Class_A_betalactamases|CTX	AIS67612.1 KM211509.1:1-876
NCBI	gi|694179059|gb|KM211509.1|betalactams|Class_A_betalactamases|CTX	gi|694179059|gb|KM211509.1|1-876
ARG-ANNOT	gi|401871158|gb|JX121117.1|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-150:JX121117:1-858:858
CARD	gi|401871158|gb|JX121117.1|betalactams|Class_A_betalactamases|SHV	@phgb|JX121117|0-858|ARO:3001189|SHV-150 [Klebsiella pneumoniae]
Lahey	gi|401871158|gb|JX121117.1|betalactams|Class_A_betalactamases|SHV	AFQ23956.1 JX121117.1:1-858
NCBI	gi|401871158|gb|JX121117.1|betalactams|Class_A_betalactamases|SHV	gi|401871158|gb|JX121117.1|1-858
Resfinder	gi|401871158|gb|JX121117.1|betalactams|Class_A_betalactamases|SHV	blaSHV-150_1_JX121117
ARG-ANNOT	816|U19459.1|SAU19459|MLS|Streptogramin_A_O-acetyltransferase|VATB	(MLS)VatB:U19459:67-705:639
CARD	816|U19459.1|SAU19459|MLS|Streptogramin_A_O-acetyltransferase|VATB	@phgb|U19459|66-705|ARO:3002841|vatB [Staphylococcus aureus]
NCBI	816|U19459.1|SAU19459|MLS|Streptogramin_A_O-acetyltransferase|VATB	gi|1181626|gb|U19459.1|SAU19459|67-705
Resfinder	816|U19459.1|SAU19459|MLS|Streptogramin_A_O-acetyltransferase|VATB	vat(B)_1_U19459
NCBI	Bla|ampH_1_AJ276031|betalactams|Class_D_betalactamases|OXA	gi|9662892|emb|AJ276632.1|1596-2390 gi|7208645|emb|AJ276031.1|112-906
Resfinder	Bla|ampH_1_AJ276031|betalactams|Class_D_betalactamases|OXA	ampH_1_AJ276031
ARG-ANNOT	858|L06156.1|PROAAC2IA|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	(AGly)Aac2-Ia:L06156:264-800:537
CARD	858|L06156.1|PROAAC2IA|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	@phgb|L06156|263-800|ARO:3002523|AAC(2')-Ia [Providencia stuartii]
NCBI	858|L06156.1|PROAAC2IA|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	gi|384478111|gb|CP003488.1|3706824-3707360 gi|410300|gb|L06156.1|PROAAC2IA|264-800
Resfinder	858|L06156.1|PROAAC2IA|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC2-PRIME	aac(2')-Ia_1_L06156
ARG-ANNOT	Bla|GOB-3|AF189291|1-756|756|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-3:AF189291:1-756:756
NCBI	Bla|GOB-3|AF189291|1-756|756|betalactams|Class_B_betalactamases|GOB	gi|9587041|gb|AF189291.1|AF189291|1-756
Resfinder	Bla|GOB-3|AF189291|1-756|756|betalactams|Class_B_betalactamases|GOB	blaGOB-3_1_AF189291
ARG-ANNOT	Flq|QnrB24|HM192542|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB24:HM192542:37-681:645
CARD	Flq|QnrB24|HM192542|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|HM192542|0-681|ARO:3002739|QnrB24 [Citrobacter freundii]
NCBI	Flq|QnrB24|HM192542|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|695224298|ref|NG_041042.1|1-681
Resfinder	Flq|QnrB24|HM192542|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB24_1_HM192542
ARG-ANNOT	Bla|LEN-11|AJ635417|1-789|789|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-11:AJ635417:1-789:789
CARD	Bla|LEN-11|AJ635417|1-789|789|betalactams|Class_A_betalactamases|LEN	@phgb|AJ635417|0-789|ARO:3002461|LEN-11 [Klebsiella pneumoniae]
NCBI	Bla|LEN-11|AJ635417|1-789|789|betalactams|Class_A_betalactamases|LEN	gi|46309209|emb|AJ635417.1|1-789
ARG-ANNOT	Bla|TEM-121|AY307374|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-121:AY307374:1-861:861
CARD	Bla|TEM-121|AY307374|1-861|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY271267|0-861|ARO:3000983|TEM-121 [Escherichia coli]
Lahey	Bla|TEM-121|AY307374|1-861|861|betalactams|Class_A_betalactamases|TEM	AAQ01671.1 AY271267.1:1-861
NCBI	Bla|TEM-121|AY307374|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|33286377|gb|AY271267.1|1-861
Resfinder	Bla|TEM-121|AY307374|1-861|861|betalactams|Class_A_betalactamases|TEM	blaTEM-121_1_AY307374
NCBI	gi|305657912|gb|HM246246.1|betalactams|Class_A_betalactamases|TEM	gi|695224309|ref|NG_041046.1|1-1069
CARD	gi|698376388|gb|KM211691.1|betalactams|Class_A_betalactamases|CTX	@phgb|KM211691|0-876|ARO:3003166|CTX-M-158 [Escherichia coli]
Lahey	gi|698376388|gb|KM211691.1|betalactams|Class_A_betalactamases|CTX	AIT97310.1 KM211691.1:1-876
NCBI	gi|698376388|gb|KM211691.1|betalactams|Class_A_betalactamases|CTX	gi|698376388|gb|KM211691.1|1-876
ARG-ANNOT	419|U51479.1|EGU51479|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	(AGly)Aph2''Ic:U51479:196-1116:921
CARD	419|U51479.1|EGU51479|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	@phgb|U51479|0-921|ARO:3002636|APH(2'')-IIIa [Enterococcus gallinarum]
NCBI	419|U51479.1|EGU51479|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	gi|1854638|gb|U51479.1|EGU51479|196-1116
Resfinder	419|U51479.1|EGU51479|Aminoglycosides|Aminoglycoside_O-phosphotransferases|APH2-DPRIME	aph(2'')-Ic_1_U51479
ARG-ANNOT	1124|AF518567.2|AF518567|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-25:AF518567:2321-3196:876
CARD	1124|AF518567.2|AF518567|betalactams|Class_A_betalactamases|CTX	@phgb|AF518567|2320-3196|ARO:3001887|CTX-M-25 [Escherichia coli]
Lahey	1124|AF518567.2|AF518567|betalactams|Class_A_betalactamases|CTX	AAM70498.1 AF518567.2:2321-3196
NCBI	1124|AF518567.2|AF518567|betalactams|Class_A_betalactamases|CTX	gi|657224404|gb|KF056330.2|146101-146976 gi|37789822|gb|AF518567.2|2321-3196
Resfinder	1124|AF518567.2|AF518567|betalactams|Class_A_betalactamases|CTX	blaCTX-M-25_1_AF518567
ARG-ANNOT	Bla|CMY-83|JX440351|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	(Bla)CMY-83:JX440351:1027-2172:1146
CARD	Bla|CMY-83|JX440351|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	@phgb|JX440351|1026-2172|ARO:3002096|CMY-83 [Citrobacter braakii]
Lahey	Bla|CMY-83|JX440351|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	AFU25638.1 JX440351.1:1027-2172
NCBI	Bla|CMY-83|JX440351|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	gi|407731518|gb|JX440351.1|1027-2172
Resfinder	Bla|CMY-83|JX440351|1027-2172|1146|betalactams|Class_C_betalactamases|CMY	blaCMY-83_1_JX440351
NCBI	Flq|AE015929.1|gene5|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|27316888|gb|AE015929.1|6916-9597
ARG-ANNOT	gi|406507780|gb|JX310327.1|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-201:JX310327:1-861:861
CARD	gi|406507780|gb|JX310327.1|betalactams|Class_A_betalactamases|TEM	@phgb|JX310327|0-861|ARO:3001378|TEM-201 [Escherichia coli]
Lahey	gi|406507780|gb|JX310327.1|betalactams|Class_A_betalactamases|TEM	AFS44742.1 JX310327.1:1-861
NCBI	gi|406507780|gb|JX310327.1|betalactams|Class_A_betalactamases|TEM	gi|406507780|gb|JX310327.1|1-861
Resfinder	gi|406507780|gb|JX310327.1|betalactams|Class_A_betalactamases|TEM	blaTEM-201_1_JX310327
NCBI	Tet|tetM_8_X04388|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|377684519|gb|JN846704.1|200-2119 gi|168478963|emb|AM889142.2|1618-3537 gi|48189|emb|X04388.1|131-2050
Resfinder	Tet|tetM_8_X04388|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_8_X04388
ARG-ANNOT	Flq|QnrB20|AB379831|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB20:AB379831:37-681:645
CARD	Flq|QnrB20|AB379831|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|AB379831|0-681|ARO:3002735|QnrB20 [Escherichia coli]
NCBI	Flq|QnrB20|AB379831|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|194306530|dbj|AB379831.1|1-681
Resfinder	Flq|QnrB20|AB379831|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB20_1_AB379831
ARG-ANNOT	Bla|SHV-66|DQ174306|5-865|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-66:DQ174306:5-865:861
CARD	Bla|SHV-66|DQ174306|5-865|861|betalactams|Class_A_betalactamases|SHV	@phgb|DQ174306|4-865|ARO:3001121|SHV-66 [Klebsiella pneumoniae]
Lahey	Bla|SHV-66|DQ174306|5-865|861|betalactams|Class_A_betalactamases|SHV	ABA06588.1 DQ174306.1:5-865
NCBI	Bla|SHV-66|DQ174306|5-865|861|betalactams|Class_A_betalactamases|SHV	gi|74422854|gb|DQ174306.1|5-865
Resfinder	Bla|SHV-66|DQ174306|5-865|861|betalactams|Class_A_betalactamases|SHV	blaSHV-66_1_DQ174306
CARD	CARD|phgb|U05883|555-1458|ARO:3003559|cepA|betalactams|Class_A_betalactamases|CEPA	@phgb|U05883|555-1458|ARO:3003559|cepA beta-lactamase [Bacteroides fragilis]
NCBI	CARD|phgb|U05883|555-1458|ARO:3003559|cepA|betalactams|Class_A_betalactamases|CEPA	gi|458300|gb|U05883.1|BFU05883|556-1458 gi|542191298|gb|KF134015.1|1-585
CARD	CARD|phgb|NC_010400|1369124-1370342|ARO:3000777|adeF|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEF	@phgb|NC_010400|1369124-1370342|ARO:3000777|adeF [Acinetobacter baumannii SDF]
NCBI	CARD|phgb|NC_010400|1369124-1370342|ARO:3000777|adeF|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEF	gi|169150821|emb|CU468230.2|1369125-1370343
CARD	Bla|TEM-102_1_AY040093|betalactams|Class_A_betalactamases|TEM	@phgb|AY040093|68-929|ARO:3000965|TEM-102 [Plasmid pWW100]
Lahey	Bla|TEM-102_1_AY040093|betalactams|Class_A_betalactamases|TEM	AAK82652.1 AY040093.1:69-929
NCBI	Bla|TEM-102_1_AY040093|betalactams|Class_A_betalactamases|TEM	gi|15081589|gb|AY040093.1|69-929
Resfinder	Bla|TEM-102_1_AY040093|betalactams|Class_A_betalactamases|TEM	blaTEM-102_1_AY040093
CARD	Mdr|NC_002516.2.882885|Multi-drug_resistance|Multi-drug_efflux_pumps|OPRN	@phgb|NC_002516|2813193-2814612|ARO:3000805|oprN [Pseudomonas aeruginosa PAO1]
NCBI	Mdr|NC_002516.2.882885|Multi-drug_resistance|Multi-drug_efflux_pumps|OPRN	gi|926451317|emb|LN871187.1|2702646-2701228 gi|881079720|gb|CP012066.1|3190866-3192284 gi|553895034|gb|CP006832.1|2813189-2814607 gi|553886202|gb|CP006831.1|2813189-2814607 gi|110227054|gb|AE004091.2|2813194-2814612
ARG-ANNOT	Bla|SHV-74|AM176549|31-891|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-74:AM176549:31-891:861
CARD	Bla|SHV-74|AM176549|31-891|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176549|30-891|ARO:3001128|SHV-74 [Klebsiella pneumoniae]
Lahey	Bla|SHV-74|AM176549|31-891|861|betalactams|Class_A_betalactamases|SHV	CAJ47129.2 AM176549.2:31-891
NCBI	Bla|SHV-74|AM176549|31-891|861|betalactams|Class_A_betalactamases|SHV	gi|160948438|emb|AM176549.2|31-891
Resfinder	Bla|SHV-74|AM176549|31-891|861|betalactams|Class_A_betalactamases|SHV	blaSHV-74_1_AM176549
NCBI	Mdr|NC_002516.2.878839|Multi-drug_resistance|Multi-drug_efflux_pumps|MEXX	gi|926451317|emb|LN871187.1|3303327-3304517 gi|553895034|gb|CP006832.1|2212507-2211317 gi|553886202|gb|CP006831.1|2212507-2211317 gi|110227054|gb|AE004091.2|2212512-2211322 gi|6502949|gb|AF147719.1|AF147719|1020-2210
ARG-ANNOT	Bla|DHA-7|HQ345945|1-1140|1140|betalactams|Class_C_betalactamases|DHA	(Bla)DHA-7:HQ456945:1-1140:1140
CARD	Bla|DHA-7|HQ345945|1-1140|1140|betalactams|Class_C_betalactamases|DHA	@phgb|HQ456945|0-1140|ARO:3002136|DHA-7 [Enterobacter cloacae]
Lahey	Bla|DHA-7|HQ345945|1-1140|1140|betalactams|Class_C_betalactamases|DHA	ADQ00385.1 HQ456945.1:1-1140
NCBI	Bla|DHA-7|HQ345945|1-1140|1140|betalactams|Class_C_betalactamases|DHA	gi|311700560|gb|HQ456945.1|1-1140
Resfinder	Bla|DHA-7|HQ345945|1-1140|1140|betalactams|Class_C_betalactamases|DHA	blaDHA-7_1_HQ456945
NCBI	Elf|NC_002516.2.881718|Elfamycins|EF-Tu_inhibition|TUFAB|RequiresSNPConfirmation	gi|974347073|gb|CP008869.1|5357456-5356263 gi|974282928|gb|CP008861.1|2971410-2970217 gi|926451317|emb|LN871187.1|746832-748025 gi|553895034|gb|CP006832.1|4768999-4767806 gi|553886202|gb|CP006831.1|4770084-4768891 gi|543879514|gb|CP006705.1|4548587-4547394 gi|110227054|gb|AE004091.2|4769004-4767811
CARD	MLS|vatD_2_AF368302|MLS|Streptogramin_A_O-acetyltransferase|VATD	@phgb|AF368302|2716-3331|ARO:3002843|vatD [Enterococcus faecium]
NCBI	MLS|vatD_2_AF368302|MLS|Streptogramin_A_O-acetyltransferase|VATD	gi|15127841|gb|AF368302.1|AF368302|2717-3331 gi|433714|gb|L12033.1|ENESATA|177-791
ARG-ANNOT	gi|383478991|gb|JQ820242.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-236:JQ820242:1-831:831
CARD	gi|383478991|gb|JQ820242.1|betalactams|Class_D_betalactamases|OXA	@phgb|JQ820242|0-831|ARO:3001677|OXA-236 [Acinetobacter baumannii]
Lahey	gi|383478991|gb|JQ820242.1|betalactams|Class_D_betalactamases|OXA	AFH36332.1 JQ820242.1:1-831
NCBI	gi|383478991|gb|JQ820242.1|betalactams|Class_D_betalactamases|OXA	gi|383478991|gb|JQ820242.1|1-831
Resfinder	gi|383478991|gb|JQ820242.1|betalactams|Class_D_betalactamases|OXA	blaOXA-236_1_JQ820242
NCBI	60|unknown_id|unknown_name|betalactams|Penicillin_binding_protein_regulator|BLAI	gi|922061703|gb|CP012475.1|1751250-1750870 gi|155793482|gb|EF540343.1|1440-1060
ARG-ANNOT	gi|397911950|gb|JQ724542.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-125:JQ724542:175-1050:876
CARD	gi|397911950|gb|JQ724542.1|betalactams|Class_A_betalactamases|CTX	@phgb|JQ724542|174-1050|ARO:3001984|CTX-M-125 [Enterobacter cloacae]
Lahey	gi|397911950|gb|JQ724542.1|betalactams|Class_A_betalactamases|CTX	AFO69261.1 JQ724542.1:175-1050
NCBI	gi|397911950|gb|JQ724542.1|betalactams|Class_A_betalactamases|CTX	gi|397911950|gb|JQ724542.1|175-1050
Resfinder	gi|397911950|gb|JQ724542.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-125_1_JQ724542
NCBI	gi|74422850|gb|DQ174304.1|betalactams|Class_A_betalactamases|SHV	gi|74422850|gb|DQ174304.1|1-865
ARG-ANNOT	Bla|CTX-M-91|GQ870432|31-906|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-91:GQ870432:31-906:876
CARD	Bla|CTX-M-91|GQ870432|31-906|876|betalactams|Class_A_betalactamases|CTX	@phgb|GQ870432|30-906|ARO:3001951|CTX-M-91 [Proteus mirabilis]
Lahey	Bla|CTX-M-91|GQ870432|31-906|876|betalactams|Class_A_betalactamases|CTX	ACX34099.1 GQ870432.1:31-906
NCBI	Bla|CTX-M-91|GQ870432|31-906|876|betalactams|Class_A_betalactamases|CTX	gi|260178851|gb|GQ870432.1|31-906
Resfinder	Bla|CTX-M-91|GQ870432|31-906|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-91_1_GQ870432
ARG-ANNOT	Tet|TetD|AB089602|1521-2705|1185|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETD	(Tet)TetD:AB089602:1521-2705:1185
NCBI	Tet|TetD|AB089602|1521-2705|1185|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETD	gi|909863445|gb|CP012169.1|42498-43682 gi|828939693|gb|CP011611.1|43290-42106 gi|828939549|gb|CP011610.1|84126-85310 gi|768030860|gb|KP276584.1|136327-137511 gi|704486155|gb|KM083064.1|2980-4164 gi|698038887|gb|KM670336.1|34246-35430 gi|695177276|gb|CP008930.1|40037-38853 gi|672605144|gb|CP009116.1|6137-4953 gi|440575242|emb|HF545433.1|60617-61801 gi|411001035|gb|JQ966979.1|4723-3539
Resfinder	Tet|TetD|AB089602|1521-2705|1185|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETD	tet(D)_1_AF467077
NCBI	gi|114386381|gb|DQ834728.1|betalactams|Class_A_betalactamases|TEM	gi|114386381|gb|DQ834728.1|1-1066
ARG-ANNOT	Bla|OXA-57|AJ631966|1-810|810|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-57:AJ631966:1-810:810
CARD	Bla|OXA-57|AJ631966|1-810|810|betalactams|Class_D_betalactamases|OXA	@phgb|AJ631966|0-810|ARO:3001771|OXA-57 [Burkholderia pseudomallei 576]
Lahey	Bla|OXA-57|AJ631966|1-810|810|betalactams|Class_D_betalactamases|OXA	CAF74882.1 AJ631966.1:1-810
NCBI	Bla|OXA-57|AJ631966|1-810|810|betalactams|Class_D_betalactamases|OXA	gi|772980534|gb|CP009586.1|2239538-2240347 gi|701245573|gb|CP009234.1|2916458-2915649 gi|701239770|gb|CP009269.1|493129-492320 gi|685710607|gb|CP008778.1|965488-966297 gi|45502118|emb|AJ631966.1|1-810
Resfinder	Bla|OXA-57|AJ631966|1-810|810|betalactams|Class_D_betalactamases|OXA	blaOXA-57_1_AJ631966
ARG-ANNOT	Bla|IMP-10|AB074433|156-896|741|betalactams|Class_B_betalactamases|IMP	(Bla)IMP-10:AB074433:156-896:741
CARD	Bla|IMP-10|AB074433|156-896|741|betalactams|Class_B_betalactamases|IMP	@phgb|AJ420864|155-896|ARO:3002203|IMP-12 [Pseudomonas putida]
Lahey	Bla|IMP-10|AB074433|156-896|741|betalactams|Class_B_betalactamases|IMP	CAD12765.1 AJ420864.1:156-896
NCBI	Bla|IMP-10|AB074433|156-896|741|betalactams|Class_B_betalactamases|IMP	gi|25278055|emb|AJ420864.1|156-896
Resfinder	Bla|IMP-10|AB074433|156-896|741|betalactams|Class_B_betalactamases|IMP	blaIMP-12_3_AJ420864
NCBI	890|AJ746361.2|AJ746361|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT2-DPRIME	gi|372292616|gb|JQ004409.1|49235-48639 gi|320091601|gb|HQ148722.1|63-659 gi|226934274|gb|FJ855133.1|64-660 gi|695211084|ref|NG_036020.1|1672-2268
NCBI	gi|1045658|gb|U37195.1|ECU37195|betalactams|Class_A_betalactamases|TEM	gi|1045658|gb|U37195.1|ECU37195|1-950
NCBI	1191|AJ243491.1|AJ243491|Aminoglycosides|Aminoglycoside_O-nucleotidyltransferases|ANT3-DPRIME	gi|18650777|emb|AJ310480.1|2065-2856 gi|8546572|emb|AJ243491.1|2002-2793
ARG-ANNOT	Bla|TEM-109|AY628175|211-1071|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-109:AY628175:211-1071:861
CARD	Bla|TEM-109|AY628175|211-1071|861|betalactams|Class_A_betalactamases|TEM	@phgb|AY628175|210-1071|ARO:3000972|TEM-109 [Escherichia coli]
Lahey	Bla|TEM-109|AY628175|211-1071|861|betalactams|Class_A_betalactamases|TEM	AAT46413.1 AY628175.1:211-1071
NCBI	Bla|TEM-109|AY628175|211-1071|861|betalactams|Class_A_betalactamases|TEM	gi|48734421|gb|AY628175.1|211-1071
Resfinder	Bla|TEM-109|AY628175|211-1071|861|betalactams|Class_A_betalactamases|TEM	blaTEM-109_1_AY628175
NCBI	1848|AF156486.1|AF156486|Trimethoprim|Dihydrofolate_reductase|DHFR|RequiresSNPConfirmation	gi|701224647|gb|KF914290.1|82-555 gi|569555425|gb|CP004000.1|124983-125456 gi|695225780|ref|NG_041408.1|1-474 gi|186920237|gb|EU622856.1|205-678 gi|62719426|gb|AY913772.1|966-1439 gi|6752459|gb|AF156486.1|AF156486|2877-3350
CARD	Flq|QnrB60_1_AB734055|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|AB734055|376-1021|ARO:3002773|QnrB60 [Citrobacter freundii]
NCBI	Flq|QnrB60_1_AB734055|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|469663614|dbj|AB734055.1|377-1021
Resfinder	Flq|QnrB60_1_AB734055|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB60_1_AB734055
CARD	gi|558607397|gb|KF705208.1|betalactams|Class_A_betalactamases|SHV	@phgb|KF705208|0-861|ARO:3001362|SHV-179 [Klebsiella pneumoniae]
Lahey	gi|558607397|gb|KF705208.1|betalactams|Class_A_betalactamases|SHV	AHA80962.1 KF705208.1:1-861
NCBI	gi|558607397|gb|KF705208.1|betalactams|Class_A_betalactamases|SHV	gi|558607397|gb|KF705208.1|1-861
Resfinder	gi|558607397|gb|KF705208.1|betalactams|Class_A_betalactamases|SHV	blaSHV-179_1_KF705208
ARG-ANNOT	gi|402746983|gb|JX313020.1|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-132:JX313020:1-876:876
CARD	gi|402746983|gb|JX313020.1|betalactams|Class_A_betalactamases|CTX	@phgb|JX313020|0-876|ARO:3001991|CTX-M-132 [Escherichia coli]
Lahey	gi|402746983|gb|JX313020.1|betalactams|Class_A_betalactamases|CTX	AFQ94051.1 JX313020.1:1-876
NCBI	gi|402746983|gb|JX313020.1|betalactams|Class_A_betalactamases|CTX	gi|756420070|gb|KP198615.1|9237-8362 gi|727903112|gb|KM207012.2|9237-8362 gi|402746983|gb|JX313020.1|1-876 gi|395483637|gb|JX206423.1|824-1
Resfinder	gi|402746983|gb|JX313020.1|betalactams|Class_A_betalactamases|CTX	blaCTX-M-132_1_JX313020
CARD	CARD|phgb|KP109676|1022-1841|ARO:3003719|MSI-OXA|betalactams|Class_D_betalactamases|MSI-OXA	@phgb|KP109676|1022-1841|ARO:3003719|MSI-OXA [Massilia sp. SB1-3]
NCBI	CARD|phgb|KP109676|1022-1841|ARO:3003719|MSI-OXA|betalactams|Class_D_betalactamases|MSI-OXA	gi|762020393|gb|KP109676.1|1023-1841
NCBI	gi|11321257|gb|AF305837.1|betalactams|Class_A_betalactamases|CTX	gi|47087855|gb|AY571969.1|10-888 gi|11321257|gb|AF305837.1|AF305837|1-879 gi|116257450|gb|DQ821704.2|1784-2659 gi|695211887|ref|NG_036283.1|1705-2580 gi|31096325|gb|AY293073.1|1-876
ARG-ANNOT	MLS|MsrC|AY004350|496-1974|1479|MLS|Macrolide_resistance_efflux_pumps|MSRC	(MLS)MsrC:AY004350:496-1974:1479
CARD	MLS|MsrC|AY004350|496-1974|1479|MLS|Macrolide_resistance_efflux_pumps|MSRC	@phgb|AY004350|0-1479|ARO:3002819|msrC [Enterococcus faecium]
NCBI	MLS|MsrC|AY004350|496-1974|1479|MLS|Macrolide_resistance_efflux_pumps|MSRC	gi|10442769|gb|AY004350.1|496-1974
Resfinder	MLS|MsrC|AY004350|496-1974|1479|MLS|Macrolide_resistance_efflux_pumps|MSRC	msr(C)_1_AY004350
ARG-ANNOT	Bla|OXA-203|HQ998857|1-825|825|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-203:HQ998857:1-825:825
CARD	Bla|OXA-203|HQ998857|1-825|825|betalactams|Class_D_betalactamases|OXA	@phgb|HQ998857|0-825|ARO:3001664|OXA-203 [Acinetobacter baumannii]
Lahey	Bla|OXA-203|HQ998857|1-825|825|betalactams|Class_D_betalactamases|OXA	ADX07748.1 HQ998857.1:1-825
NCBI	Bla|OXA-203|HQ998857|1-825|825|betalactams|Class_D_betalactamases|OXA	gi|322719699|gb|HQ998857.1|1-825
Resfinder	Bla|OXA-203|HQ998857|1-825|825|betalactams|Class_D_betalactamases|OXA	blaOXA-203_1_HQ998857
ARG-ANNOT	Bla|PER-4|EU748544|1-927|927|betalactams|Class_A_betalactamases|PER	(Bla)PER-4:EU748544:1-927:927
CARD	Bla|PER-4|EU748544|1-927|927|betalactams|Class_A_betalactamases|PER	@phgb|EU748544|0-927|ARO:3002366|PER-4 [Proteus vulgaris]
Lahey	Bla|PER-4|EU748544|1-927|927|betalactams|Class_A_betalactamases|PER	ACE77058.1 EU748544.1:1-927
NCBI	Bla|PER-4|EU748544|1-927|927|betalactams|Class_A_betalactamases|PER	gi|190364828|gb|EU748544.1|1-927
Resfinder	Bla|PER-4|EU748544|1-927|927|betalactams|Class_A_betalactamases|PER	blaPER-4_1_EU748544
ARG-ANNOT	Bla|CTX-M-8|AF189721|274-1119|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-8:AF189721:274-1119:876
CARD	Bla|CTX-M-8|AF189721|274-1119|876|betalactams|Class_A_betalactamases|CTX	@phgb|AF189721|273-1149|ARO:3001871|CTX-M-8 [Citrobacter amalonaticus]
Lahey	Bla|CTX-M-8|AF189721|274-1119|876|betalactams|Class_A_betalactamases|CTX	AAF04388.1 AF189721.1:274-1149
NCBI	Bla|CTX-M-8|AF189721|274-1119|876|betalactams|Class_A_betalactamases|CTX	gi|970697631|gb|KT935446.1|131825-132700 gi|573008382|emb|HG798900.1|1-876 gi|695199311|ref|NG_035199.1|274-1149 gi|288872162|dbj|AB543595.1|1292-2157 gi|958572051|gb|KT001475.1|1854-2689 gi|958572031|gb|KT001474.1|1864-2696 gi|958571981|gb|KT001472.1|1848-2680 gi|958571965|gb|KT001471.1|1844-2676 gi|958572015|gb|KT001473.1|1847-2663
Resfinder	Bla|CTX-M-8|AF189721|274-1119|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-8_1_AF189721
CARD	Bla|CARB-6_1_AF030945|betalactams|Class_A_betalactamases|CARB	@phgb|AF030945|95-962|ARO:3002245|CARB-6 [Vibrio cholerae]
Lahey	Bla|CARB-6_1_AF030945|betalactams|Class_A_betalactamases|CARB	AAD19217.1 AF030945.1:96-962
NCBI	Bla|CARB-6_1_AF030945|betalactams|Class_A_betalactamases|CARB	gi|695198991|ref|NG_035137.1|96-962
Resfinder	Bla|CARB-6_1_AF030945|betalactams|Class_A_betalactamases|CARB	blaCARB-6_1_AF030945
CARD	CARD|phgb|JQ727668|0-375|ARO:3000823|ramA|Multi-drug_resistance|MDR_regulator|RAMA	@phgb|JQ727668|0-375|ARO:3000823|ramA [Enterobacter cloacae]
NCBI	CARD|phgb|JQ727668|0-375|ARO:3000823|ramA|Multi-drug_resistance|MDR_regulator|RAMA	gi|387965695|gb|JQ727668.1|1-375
CARD	CARD|phgb|AM941159|208-1069|ARO:3001022|TEM-156|betalactams|Class_A_betalactamases|TEM	@phgb|AM941159|208-1069|ARO:3001022|TEM-156 [Proteus mirabilis]
NCBI	CARD|phgb|AM941159|208-1069|ARO:3001022|TEM-156|betalactams|Class_A_betalactamases|TEM	gi|223006550|emb|AM941159.1|209-1070
ARG-ANNOT	AGly|3Aac6-Iae|AB104852|1935-2486|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)3Aac6-Iae:AB104852:1935-2486:552
CARD	AGly|3Aac6-Iae|AB104852|1935-2486|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AB104852|1934-2486|ARO:3002573|AAC(6')-Iae [Pseudomonas aeruginosa]
NCBI	AGly|3Aac6-Iae|AB104852|1935-2486|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|918400318|dbj|AP014939.1|111792-112343 gi|677283264|dbj|AB983593.1|3363-3914 gi|575771377|dbj|AB901037.1|958-1509 gi|549442311|gb|KF512018.1|1365-1916 gi|348031532|dbj|AP012280.1|1896045-1896596 gi|82754992|gb|DQ288156.1|1889-2440 gi|159885530|dbj|AB366442.1|30853-31404 gi|46092527|dbj|AB104852.1|1935-2486 gi|674252391|gb|CP008739.2|2104434-2104821
Resfinder	AGly|3Aac6-Iae|AB104852|1935-2486|552|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')-Iae_1_AB104852
ARG-ANNOT	Bla|GOB-10|AY647247|1-873|873|betalactams|Class_B_betalactamases|GOB	(Bla)GOB-10:AY647247:1-873:873
NCBI	Bla|GOB-10|AY647247|1-873|873|betalactams|Class_B_betalactamases|GOB	gi|49798141|gb|AY647247.1|1-873
Resfinder	Bla|GOB-10|AY647247|1-873|873|betalactams|Class_B_betalactamases|GOB	blaGOB-10_1_AY647247
ARG-ANNOT	Bla|OXA-320|KF151169|1-831|831|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-320:KF151169:1-831:831
CARD	Bla|OXA-320|KF151169|1-831|831|betalactams|Class_D_betalactamases|OXA	@phgb|KF151169|0-831|ARO:3001793|OXA-320 [Proteus mirabilis]
Lahey	Bla|OXA-320|KF151169|1-831|831|betalactams|Class_D_betalactamases|OXA	AGR55864.1 KF151169.1:1-831
NCBI	Bla|OXA-320|KF151169|1-831|831|betalactams|Class_D_betalactamases|OXA	gi|525671999|gb|KF151169.1|1-831
Resfinder	Bla|OXA-320|KF151169|1-831|831|betalactams|Class_D_betalactamases|OXA	blaOXA-320_1_KF151169
CARD	Bla|IMP-31_1_KF148593|betalactams|Class_B_betalactamases|IMP	@phgb|KF148593|0-738|ARO:3002222|IMP-31 [Pseudomonas aeruginosa]
Lahey	Bla|IMP-31_1_KF148593|betalactams|Class_B_betalactamases|IMP	AGS82587.1 KF148593.1:1-738
NCBI	Bla|IMP-31_1_KF148593|betalactams|Class_B_betalactamases|IMP	gi|529283985|gb|KF148593.1|1-738 gi|406693638|gb|JQ432564.1|21722-20985
Resfinder	Bla|IMP-31_1_KF148593|betalactams|Class_B_betalactamases|IMP	blaIMP-31_1_KF148593
ARG-ANNOT	Bla|TEM-183|HQ529916|111-971|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-183:HQ529916:111-971:861
CARD	Bla|TEM-183|HQ529916|111-971|861|betalactams|Class_A_betalactamases|TEM	@phgb|HQ529916|110-971|ARO:3001045|TEM-183 [Klebsiella pneumoniae]
Lahey	Bla|TEM-183|HQ529916|111-971|861|betalactams|Class_A_betalactamases|TEM	ADR71220.1 HQ529916.1:111-971
NCBI	Bla|TEM-183|HQ529916|111-971|861|betalactams|Class_A_betalactamases|TEM	gi|313586334|gb|HQ529916.1|111-971
Resfinder	Bla|TEM-183|HQ529916|111-971|861|betalactams|Class_A_betalactamases|TEM	blaTEM-183_1_HQ529916
ARG-ANNOT	Tet|TetL|FN435329|1-1377|1377|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	(Tet)TetL:FN435329:1-1377:1377
NCBI	Tet|TetL|FN435329|1-1377|1377|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	gi|961575543|gb|CP013629.1|5291-3915 gi|961575535|gb|CP013628.1|5022-3646 gi|961575529|gb|CP013627.1|6010-4634 gi|939198274|gb|CP010061.1|1296351-1297727 gi|939198273|gb|CP010060.1|1323280-1324656 gi|937305921|gb|CP012756.1|736271-737647 gi|909838373|gb|KP834592.1|14207-15583 gi|777762562|gb|KP345886.1|14207-15583 gi|765364767|emb|LN609191.1|2730-1354 gi|765364764|emb|LN609190.1|3068-1692
Resfinder	Tet|TetL|FN435329|1-1377|1377|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	tet(L)_2_M29725
ARG-ANNOT	CARD|phgb|L12710|0-549|ARO:3002556|AAC6-PRIME-Ii|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	(AGly)Aac6-Ii:L12710:169-717:549
CARD	CARD|phgb|L12710|0-549|ARO:3002556|AAC6-PRIME-Ii|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|L12710|0-549|ARO:3002556|AAC(6')-Ii [Enterococcus faecium]
NCBI	CARD|phgb|L12710|0-549|ARO:3002556|AAC6-PRIME-Ii|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|414575|gb|L12710.1|ENEAAC|169-717
CARD	Flq|KJ158441.1|gene1|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRD	@phgb|KJ158441|2732-3377|ARO:3002789|QnrD2 [Salmonella enterica subsp. enterica serovar Hadar]
NCBI	Flq|KJ158441.1|gene1|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRD	gi|695227765|ref|NG_041675.1|61-705 gi|695228203|ref|NG_041753.1|2733-3377
CARD	gi|530540024|gb|KF361506.1|betalactams|Class_B_betalactamases|NDM	@phgb|KF361506|0-813|ARO:3002360|NDM-10 [Klebsiella pneumoniae subsp. pneumoniae]
Lahey	gi|530540024|gb|KF361506.1|betalactams|Class_B_betalactamases|NDM	AGT37351.1 KF361506.1:1-813
NCBI	gi|530540024|gb|KF361506.1|betalactams|Class_B_betalactamases|NDM	gi|530540024|gb|KF361506.1|1-813
Resfinder	gi|530540024|gb|KF361506.1|betalactams|Class_B_betalactamases|NDM	blaNDM-10_1_KF361506
ARG-ANNOT	Bla|LEN-17|DQ149134|1-861|861|betalactams|Class_A_betalactamases|LEN	(Bla)LEN-17:DQ149134:1-861:861
NCBI	Bla|LEN-17|DQ149134|1-861|861|betalactams|Class_A_betalactamases|LEN	gi|146336926|gb|EF205593.1|1-861 gi|73665387|gb|DQ149134.1|1-861
Resfinder	Bla|LEN-17|DQ149134|1-861|861|betalactams|Class_A_betalactamases|LEN	blaLEN17_1_EF205593
ARG-ANNOT	1241|AY044436.1|AY044436|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-15:JQ686199:261-1136:876
CARD	1241|AY044436.1|AY044436|betalactams|Class_A_betalactamases|CTX	@phgb|AY044436|1435-2311|ARO:3001878|CTX-M-15 [Escherichia coli]
Lahey	1241|AY044436.1|AY044436|betalactams|Class_A_betalactamases|CTX	AAL02127.1 AY044436.1:1436-2311
NCBI	1241|AY044436.1|AY044436|betalactams|Class_A_betalactamases|CTX	gi|970698242|gb|KT988020.1|10375-9500 gi|970698242|gb|KT988020.1|17786-16911 gi|970698221|gb|KT988019.1|2598-1723 gi|970698093|gb|KT988018.1|8263-7388 gi|975900838|gb|CP014005.1|47694-48569 gi|973710528|gb|CP013835.1|1786952-1786077 gi|973710528|gb|CP013835.1|3414336-3415211 gi|973710528|gb|CP013835.1|4537256-4538131 gi|971339514|gb|CP006662.2|48003-47128 gi|971338783|gb|CP006659.2|5407907-5408782 gi|943457735|gb|KT818627.1|77729-78604 gi|943457735|gb|KT818627.1|139320-140195 gi|970568188|dbj|LC107628.1|178-1053 gi|966626646|gb|CP013657.1|137212-136337
Resfinder	1241|AY044436.1|AY044436|betalactams|Class_A_betalactamases|CTX	blaCTX-M-15_23_DQ302097
NCBI	1538|unknown_id|unknown_name|Phenicol|Phenicol_efflux_pumps|FLOR	gi|343916452|gb|JF268688.1|4316-3093 gi|820773184|gb|KM877269.1|106985-108188 gi|833127931|gb|KP696484.1|1069-2272 gi|678222149|gb|KJ909290.1|24367-25570 gi|440575351|emb|HF545434.1|42519-41316 gi|305670530|gb|HQ023861.1|30385-31588 gi|695213834|ref|NG_036692.1|12-1215
ARG-ANNOT	Bla|TEM-76|AF190694|209-1069|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-76:AF190694:209-1069:861
CARD	Bla|TEM-76|AF190694|209-1069|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF190694|208-1069|ARO:3000942|TEM-76 [Escherichia coli]
Lahey	Bla|TEM-76|AF190694|209-1069|861|betalactams|Class_A_betalactamases|TEM	AAF05613.1 AF190694.1:209-1069
NCBI	Bla|TEM-76|AF190694|209-1069|861|betalactams|Class_A_betalactamases|TEM	gi|6176545|gb|AF190694.1|AF190694|209-1069
Resfinder	Bla|TEM-76|AF190694|209-1069|861|betalactams|Class_A_betalactamases|TEM	blaTEM-76_1_AF190694
ARG-ANNOT	Bla|SHV-122|GQ290211|1-515|515|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-122:GQ290211:1-515:515
NCBI	Bla|SHV-122|GQ290211|1-515|515|betalactams|Class_A_betalactamases|SHV	gi|264665731|gb|GQ290211.1|515-1
ARG-ANNOT	Bla|SHV-64|DQ174304|5-865|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-64:DQ174304:5-865:861
CARD	Bla|SHV-64|DQ174304|5-865|861|betalactams|Class_A_betalactamases|SHV	@phgb|DQ174304|4-865|ARO:3001119|SHV-64 [Klebsiella pneumoniae]
Lahey	Bla|SHV-64|DQ174304|5-865|861|betalactams|Class_A_betalactamases|SHV	ABA06586.1 DQ174304.1:5-865
NCBI	Bla|SHV-64|DQ174304|5-865|861|betalactams|Class_A_betalactamases|SHV	gi|74422850|gb|DQ174304.1|5-865
Resfinder	Bla|SHV-64|DQ174304|5-865|861|betalactams|Class_A_betalactamases|SHV	blaSHV-64_1_DQ174304
ARG-ANNOT	Bla|ACT-8|FN645445|1-1146|1146|betalactams|Class_C_betalactamases|ACT	(Bla)ACT-8:FN645445:1-1146:1146
Lahey	Bla|ACT-8|FN645445|1-1146|1146|betalactams|Class_C_betalactamases|ACT	CBI75448.1 FN645445.1:1-1146
NCBI	Bla|ACT-8|FN645445|1-1146|1146|betalactams|Class_C_betalactamases|ACT	gi|315456455|emb|FN645445.1|1-1146
ARG-ANNOT	Bla|TEM-20|EU527189|4132-4992|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-20:EU527189:4132-4992:861
NCBI	Bla|TEM-20|EU527189|4132-4992|861|betalactams|Class_A_betalactamases|TEM	gi|170652706|gb|EU527189.1|4132-4992
Resfinder	Bla|TEM-20|EU527189|4132-4992|861|betalactams|Class_A_betalactamases|TEM	blaTEM-20_1_EU527189
NCBI	Gly|VanS-Pt_5_DQ018711|Glycopeptides|VanA-type_regulator|VANSA	gi|66731642|gb|DQ018711.1|674-1840
Resfinder	Gly|VanS-Pt_5_DQ018711|Glycopeptides|VanA-type_regulator|VANSA	VanS-Pt_5_DQ018711
NCBI	Met|nimE_1_AM042593|Metronidazole|nim_nitroimidazole_reductase|NIME	gi|695200427|ref|NG_036131.1|1052-1486
Resfinder	Met|nimE_1_AM042593|Metronidazole|nim_nitroimidazole_reductase|NIME	nimE_1_AM042593
CARD	CARD|phgb|EU250284|4730-5426|ARO:3002927|vanRL|Glycopeptides|VanL-type_regulator|VANRL	@phgb|EU250284|4730-5426|ARO:3002927|vanRL [Enterococcus faecalis]
NCBI	CARD|phgb|EU250284|4730-5426|ARO:3002927|vanRL|Glycopeptides|VanL-type_regulator|VANRL	gi|160947039|gb|EU250284.1|4731-5427
NCBI	gi|388564827|gb|JQ733571.1|betalactams|Class_C_betalactamases|CMY	gi|620596490|dbj|AB931163.1|811-2038 gi|388564827|gb|JQ733571.1|1028-2255
NCBI	868|DQ022190.1|DQ022190|Glycopeptides|VanC-type_resistance_protein|VANC	gi|67479934|gb|DQ022190.1|205-1236 gi|58045581|gb|AY870596.1|4-430 gi|58045583|gb|AY870597.1|1-402 gi|58045587|gb|AY870599.1|1-387
Resfinder	868|DQ022190.1|DQ022190|Glycopeptides|VanC-type_resistance_protein|VANC	VanC_2_DQ022190
CARD	AGly|AY123251|gene5|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|AY123251|2950-3505|ARO:3002594|AAC(6')-IIa [Salmonella enterica subsp. enterica serovar Typhi]
NCBI	AGly|AY123251|gene5|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|974751547|gb|KU130294.1|229836-230390 gi|974751547|gb|KU130294.1|243485-242931 gi|930425900|gb|KR067583.1|574-1128 gi|926460200|gb|KR780673.1|5793-6347 gi|829496271|gb|KP420006.1|687-1241 gi|686483904|gb|KM111260.1|123-677 gi|685424881|gb|KM009138.1|576-1130 gi|635661971|gb|KJ569108.1|97-651 gi|628945869|gb|KJ488982.1|113-667 gi|695227272|ref|NG_041635.1|74-628 gi|507137596|gb|KC540631.1|1010-1564
ARG-ANNOT	Bla|IND-11|HM245379|57-788|732|betalactams|Class_B_betalactamases|IND	(Bla)IND-11:HM245379:57-788:732
CARD	Bla|IND-11|HM245379|57-788|732|betalactams|Class_B_betalactamases|IND	@phgb|HM245379|56-788|ARO:3002267|IND-11 [Chryseobacterium indologenes]
Lahey	Bla|IND-11|HM245379|57-788|732|betalactams|Class_B_betalactamases|IND	ADK25050.1 HM245379.1:57-788
NCBI	Bla|IND-11|HM245379|57-788|732|betalactams|Class_B_betalactamases|IND	gi|300510839|gb|HM245379.1|57-788
Resfinder	Bla|IND-11|HM245379|57-788|732|betalactams|Class_B_betalactamases|IND	blaIND-11_1_HM245379
CARD	CARD|phgb|HE650138|2186-2918|ARO:3003205|Erm43|MLS|23S_rRNA_methyltransferases|ERM	@phgb|HE650138|2186-2918|ARO:3003205|Erm(43) [Staphylococcus lentus]
NCBI	CARD|phgb|HE650138|2186-2918|ARO:3003205|Erm43|MLS|23S_rRNA_methyltransferases|ERM	gi|397529004|emb|HE650138.1|2187-2918
NCBI	Flq|CP000675.2|gene3231|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|PARC|RequiresSNPConfirmation	gi|225791049|gb|CP000675.2|3550879-3548624 gi|984671414|emb|LT009690.1|1401817-1401844
CARD	Bla|TEM-45_1_X95401|betalactams|Class_A_betalactamases|TEM	@phgb|X95401|208-1069|ARO:3000914|TEM-45 [Escherichia coli]
Lahey	Bla|TEM-45_1_X95401|betalactams|Class_A_betalactamases|TEM	CAA64682.1 X95401.1:209-1069
NCBI	Bla|TEM-45_1_X95401|betalactams|Class_A_betalactamases|TEM	gi|1524022|emb|X95401.1|209-1069
Resfinder	Bla|TEM-45_1_X95401|betalactams|Class_A_betalactamases|TEM	blaTEM-45_1_X95401
ARG-ANNOT	Bla|cphA7|AY227053|1-765|765|betalactams|Class_B_betalactamases|CPHA	(Bla)cphA7:AY227053:1-765:765
NCBI	Bla|cphA7|AY227053|1-765|765|betalactams|Class_B_betalactamases|CPHA	gi|37359437|gb|AY227053.1|1-765
Resfinder	Bla|cphA7|AY227053|1-765|765|betalactams|Class_B_betalactamases|CPHA	cphA7_1_AY227053
CARD	CARD|phgb|AM399080|1664-2150|ARO:3002835|lnuA|MLS|Lincosamide_nucleotidyltransferases|LNUA	@phgb|AM399080|1664-2150|ARO:3002835|lnuA [Staphylococcus chromogenes]
NCBI	CARD|phgb|AM399080|1664-2150|ARO:3002835|lnuA|MLS|Lincosamide_nucleotidyltransferases|LNUA	gi|391225694|gb|JQ861958.1|2077-2563 gi|158526956|gb|EU185047.1|231-717 gi|114425695|emb|AM399080.1|1665-2151 gi|86439166|emb|AM184102.1|1948-2434
ARG-ANNOT	Bla|CTX-M-61|GU125683|1-876|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-61:GU125683:1-876:876
NCBI	Bla|CTX-M-61|GU125683|1-876|876|betalactams|Class_A_betalactamases|CTX	gi|281335953|gb|GU125683.1|1-876
CARD	CARD|phgb|AF121000|0-1155|ARO:3000183|tetZ|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETZ	@phgb|AF121000|0-1155|ARO:3000183|tetZ [Corynebacterium glutamicum]
NCBI	CARD|phgb|AF121000|0-1155|ARO:3000183|tetZ|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETZ	gi|29242895|gb|AY222818.1|2159-1005 gi|29164981|gb|AY219860.1|2334-1180 gi|29164976|gb|AY219695.1|2163-1009 gi|29164967|gb|AY219692.1|1842-688 gi|29164958|gb|AY219689.1|2139-985 gi|29164940|gb|AY219684.1|4793-3639 gi|29242917|gb|AY222825.1|4819-3665 gi|29242897|gb|AY222819.1|2160-1006 gi|17386071|gb|AF445081.1|4599-3445 gi|4583389|gb|AF121000.1|AF121000|11880-13034
Resfinder	CARD|phgb|AF121000|0-1155|ARO:3000183|tetZ|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETZ	tet(Z)_2_AF121000
CARD	MLS|ermC_12_Y09003|MLS|23S_rRNA_methyltransferases|ERMC	@phgb|Y09003|188-923|ARO:3000250|ErmC [Staphylococcus hyicus]
NCBI	MLS|ermC_12_Y09003|MLS|23S_rRNA_methyltransferases|ERMC	gi|353127801|gb|JF968540.1|154-888 gi|353127788|gb|JF968536.1|154-888 gi|353127785|gb|JF968535.1|154-888 gi|353127782|gb|JF968534.1|154-888 gi|2764998|emb|Y09003.1|189-923
Resfinder	MLS|ermC_12_Y09003|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_12_Y09003
ARG-ANNOT	Bla|CTX-M-49AY847145|82-957|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-49:AY847145:82-957:876
CARD	Bla|CTX-M-49AY847145|82-957|876|betalactams|Class_A_betalactamases|CTX	@phgb|AY847145|81-957|ARO:3001911|CTX-M-49 [Klebsiella pneumoniae]
Lahey	Bla|CTX-M-49AY847145|82-957|876|betalactams|Class_A_betalactamases|CTX	AAV97954.1 AY847145.1:82-957
NCBI	Bla|CTX-M-49AY847145|82-957|876|betalactams|Class_A_betalactamases|CTX	gi|56554766|gb|AY847145.1|82-957
Resfinder	Bla|CTX-M-49AY847145|82-957|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-49_1_AY847145
NCBI	Tet|tetM_1_X92947|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	gi|760459614|gb|KM516885.1|12123-14042 gi|724425628|emb|LN680001.1|1892461-1890542 gi|723796434|emb|LN649259.1|1487222-1489141 gi|723796434|emb|LN649259.1|3260897-3258978 gi|426308955|gb|JQ679011.1|13242-11323 gi|377684511|gb|JN846700.1|325-2244 gi|377684509|gb|JN846699.1|325-2244 gi|340708491|gb|JF830611.2|623-2542 gi|334279325|dbj|AP012053.1|1649285-1647366 gi|215269142|emb|X92947.2|214-2133 gi|198385243|gb|EU918661.1|1-1920
Resfinder	Tet|tetM_1_X92947|Tetracyclines|Tetracycline_resistance_ribosomal_protection_proteins|TETM	tet(M)_1_X92947
CARD	gi|529283954|gb|KF131539.1|betalactams|Class_B_betalactamases|VIM	@phgb|KF131539|0-801|ARO:3002309|VIM-39 [Klebsiella pneumoniae]
Lahey	gi|529283954|gb|KF131539.1|betalactams|Class_B_betalactamases|VIM	AGS82586.1 KF131539.1:1-801
NCBI	gi|529283954|gb|KF131539.1|betalactams|Class_B_betalactamases|VIM	gi|768032417|gb|KM975296.1|596-1396 gi|529283954|gb|KF131539.1|1-801
ARG-ANNOT	Bla|OKP-B-7|AM051156|1-861|861|betalactams|Class_A_betalactamases|OKP	(Bla)OKP-B-7:AM051156:1-861:861
CARD	Bla|OKP-B-7|AM051156|1-861|861|betalactams|Class_A_betalactamases|OKP	@phgb|AM051156|0-861|ARO:3002440|OKP-B-7 [Klebsiella pneumoniae]
NCBI	Bla|OKP-B-7|AM051156|1-861|861|betalactams|Class_A_betalactamases|OKP	gi|82655091|emb|AM051156.1|1-861
Resfinder	Bla|OKP-B-7|AM051156|1-861|861|betalactams|Class_A_betalactamases|OKP	blaOKP-B-7_1_AM051156
ARG-ANNOT	Bla|TEM-53|AF104441|194-1054|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-53:AF104441:194-1054:861
CARD	Bla|TEM-53|AF104441|194-1054|861|betalactams|Class_A_betalactamases|TEM	@phgb|AF104441|193-1054|ARO:3000922|TEM-53 [Klebsiella pneumoniae]
Lahey	Bla|TEM-53|AF104441|194-1054|861|betalactams|Class_A_betalactamases|TEM	AAD22538.1 AF104441.1:194-1054
NCBI	Bla|TEM-53|AF104441|194-1054|861|betalactams|Class_A_betalactamases|TEM	gi|4557165|gb|AF104441.1|194-1054
Resfinder	Bla|TEM-53|AF104441|194-1054|861|betalactams|Class_A_betalactamases|TEM	blaTEM-53_1_AF104441
ARG-ANNOT	Bla|LAT-1|X78117|122-1287|1146|betalactams|Class_C_betalactamases|CMY	(Bla)LAT-1:X78117:122-1287:1146
CARD	Bla|LAT-1|X78117|122-1287|1146|betalactams|Class_C_betalactamases|CMY	@phgb|X78117|141-1287|ARO:3001857|LAT-1 [Klebsiella pneumoniae]
Lahey	Bla|LAT-1|X78117|122-1287|1146|betalactams|Class_C_betalactamases|CMY	CAA55007.1 X78117.1:142-1287
NCBI	Bla|LAT-1|X78117|122-1287|1146|betalactams|Class_C_betalactamases|CMY	gi|496632|emb|X78117.1|142-1287
Resfinder	Bla|LAT-1|X78117|122-1287|1146|betalactams|Class_C_betalactamases|CMY	blaLAT-1_1_X78117
ARG-ANNOT	Bla|SHV-75|AM176550|31-891|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-75:AM176550:31-891:861
CARD	Bla|SHV-75|AM176550|31-891|861|betalactams|Class_A_betalactamases|SHV	@phgb|AM176550|30-891|ARO:3001129|SHV-75 [Klebsiella pneumoniae]
Lahey	Bla|SHV-75|AM176550|31-891|861|betalactams|Class_A_betalactamases|SHV	CAJ47130.2 AM176550.2:31-891
NCBI	Bla|SHV-75|AM176550|31-891|861|betalactams|Class_A_betalactamases|SHV	gi|160948440|emb|AM176550.2|31-891
Resfinder	Bla|SHV-75|AM176550|31-891|861|betalactams|Class_A_betalactamases|SHV	blaSHV-75_1_AM176550
NCBI	gi|93277247|gb|DQ463751.1|betalactams|Class_C_betalactamases|CMY	gi|641682562|emb|HG941718.1|4940329-4941599 gi|93277247|gb|DQ463751.1|1-1271 gi|90568484|gb|DQ438952.1|86-1356
NCBI	Bla|mecA_2_FR823292|betalactams|Penicillin_binding_protein|PBP2	gi|333033673|emb|FR823292.1|1741-3738
Resfinder	Bla|mecA_2_FR823292|betalactams|Penicillin_binding_protein|PBP2	mecA_2_FR823292
ARG-ANNOT	gi|21262147|emb|AJ488303.1|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-43:AJ488303:1-810:810
CARD	gi|21262147|emb|AJ488303.1|betalactams|Class_D_betalactamases|OXA	@phgb|AJ488303|0-810|ARO:3001770|OXA-43 [Burkholderia pseudomallei]
Lahey	gi|21262147|emb|AJ488303.1|betalactams|Class_D_betalactamases|OXA	CAD32565.1 AJ488303.1:1-810
NCBI	gi|21262147|emb|AJ488303.1|betalactams|Class_D_betalactamases|OXA	gi|21262147|emb|AJ488303.1|1-810
Resfinder	gi|21262147|emb|AJ488303.1|betalactams|Class_D_betalactamases|OXA	blaOXA-43_1_AJ488303
CARD	Bla|CMY-110_1_AB872957|betalactams|Class_C_betalactamases|CMY	@phgb|AB872957|0-1146|ARO:3002071|CMY-110 [Escherichia coli]
Lahey	Bla|CMY-110_1_AB872957|betalactams|Class_C_betalactamases|CMY	BAO05497.1 AB872957.1:1-1146
NCBI	Bla|CMY-110_1_AB872957|betalactams|Class_C_betalactamases|CMY	gi|558515789|dbj|AB872957.1|1-1146
Resfinder	Bla|CMY-110_1_AB872957|betalactams|Class_C_betalactamases|CMY	blaCMY-110_1_AB872957
ARG-ANNOT	Flq|QnrB48|JQ762640|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	(Flq)QnrB48:JQ762640:37-681:645
CARD	Flq|QnrB48|JQ762640|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	@phgb|JQ762640|36-681|ARO:3002763|QnrB48 [Citrobacter freundii]
NCBI	Flq|QnrB48|JQ762640|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	gi|384402301|gb|JQ762640.1|37-681
Resfinder	Flq|QnrB48|JQ762640|37-681|645|Fluoroquinolones|Quinolone_resistance_protein_Qnr|QNRB	QnrB48_1_JQ762640
CARD	Bla|OXA-322_1_KF203096|betalactams|Class_D_betalactamases|OXA	@phgb|KF203096|0-822|ARO:3001510|OXA-322 [Acinetobacter calcoaceticus]
Lahey	Bla|OXA-322_1_KF203096|betalactams|Class_D_betalactamases|OXA	AGW16404.1 KF203096.1:1-822
NCBI	Bla|OXA-322_1_KF203096|betalactams|Class_D_betalactamases|OXA	gi|544207391|gb|KF203096.1|1-822
Resfinder	Bla|OXA-322_1_KF203096|betalactams|Class_D_betalactamases|OXA	blaOXA-322_1_KF203096
CARD	2|AY769962.1|AY769962|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEB	@phgb|AY769962|2434-5611|ARO:3000781|adeJ [Acinetobacter baumannii]
NCBI	2|AY769962.1|AY769962|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEB	gi|60207555|gb|AY769962.1|2435-5611
ARG-ANNOT	Bla|OXA-245|JX438001|1-798|798|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-245:JX438001::1-798:798
CARD	Bla|OXA-245|JX438001|1-798|798|betalactams|Class_D_betalactamases|OXA	@phgb|JX438001|0-798|ARO:3001787|OXA-245 [Klebsiella pneumoniae]
Lahey	Bla|OXA-245|JX438001|1-798|798|betalactams|Class_D_betalactamases|OXA	AGC60013.1 JX438001.1:1-798
NCBI	Bla|OXA-245|JX438001|1-798|798|betalactams|Class_D_betalactamases|OXA	gi|695227010|ref|NG_041606.1|1-798
Resfinder	Bla|OXA-245|JX438001|1-798|798|betalactams|Class_D_betalactamases|OXA	blaOXA-245_1_JX438001
CARD	CARD|phgb|NC_002516|779462-780101|ARO:3002679|catB7|Phenicol|Chloramphenicol_acetyltransferases|CAT	@phgb|NC_002516|779462-780101|ARO:3002679|catB7 [Pseudomonas aeruginosa PAO1]
NCBI	CARD|phgb|NC_002516|779462-780101|ARO:3002679|catB7|Phenicol|Chloramphenicol_acetyltransferases|CAT	gi|974347073|gb|CP008869.1|1012397-1013036 gi|926451317|emb|LN871187.1|4736357-4735718 gi|675286744|emb|HG974234.1|646986-647625 gi|553895034|gb|CP006832.1|779463-780102 gi|553886202|gb|CP006831.1|779463-780102 gi|543879514|gb|CP006705.1|779341-779980 gi|110227054|gb|AE004091.2|779463-780102 gi|4104538|gb|AF036933.1|AF036933|815-176
NCBI	MLS|ermC_16_AF019140|MLS|23S_rRNA_methyltransferases|ERMC	gi|695198047|ref|NG_034889.1|524-1258 gi|353127779|gb|JF968533.1|150-197
Resfinder	MLS|ermC_16_AF019140|MLS|23S_rRNA_methyltransferases|ERMC	erm(C)_16_AF019140
ARG-ANNOT	Bla|KPC-1|AF297554|131-1012|882|betalactams|Class_A_betalactamases|KPC	(Bla)KPC-1:AF297554:131-1012:882
NCBI	Bla|KPC-1|AF297554|131-1012|882|betalactams|Class_A_betalactamases|KPC	gi|10121874|gb|AF297554.1|AF297554|131-1012
Resfinder	Bla|KPC-1|AF297554|131-1012|882|betalactams|Class_A_betalactamases|KPC	blaKPC-1_1_AF297554
CARD	CARD|phgb|NC_010400|1365938-1369118|ARO:3000778|adeG|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEG	@phgb|NC_010400|1365938-1369118|ARO:3000778|adeG [Acinetobacter baumannii SDF]
NCBI	CARD|phgb|NC_010400|1365938-1369118|ARO:3000778|adeG|Multi-drug_resistance|Multi-drug_efflux_pumps|ADEG	gi|169150821|emb|CU468230.2|1365939-1369119
NCBI	Sul|sul1_3_EU855787|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	gi|226426103|gb|EU855788.1|148975-149901 gi|226425792|gb|EU855787.1|148975-149901 gi|973585379|gb|KP054476.2|28624-28651
Resfinder	Sul|sul1_3_EU855787|Sulfonamides|Sulfonamide-resistant_dihydropteroate_synthases|SULI	sul1_3_EU855787
CARD	Flq|CP003248.2|gene6|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	@pvgb|AL123456|7301-9818|ARO:3003295|Mycobacterium tuberculosis gyrA conferring resistance to fluoroquinolones [Mycobacterium tuberculosis H37Rv]
NCBI	Flq|CP003248.2|gene6|Fluoroquinolones|Fluoroquinolone-resistant_DNA_topoisomerases|GYRA|RequiresSNPConfirmation	gi|984950177|gb|CP010330.1|7302-9818 gi|984945858|gb|CP010329.1|7302-9818 gi|749193065|gb|CP007027.1|7302-9818 gi|690310687|gb|CP009480.1|7302-9818 gi|559794742|gb|CP003248.2|7302-9818 gi|444893469|emb|AL123456.3|7302-9818 gi|405113337|gb|JX303241.1|1-2517 gi|148503909|gb|CP000611.1|7302-9818
ARG-ANNOT	Bla|TEM-1|JQ735917|1-861|861|betalactams|Class_A_betalactamases|TEM	(Bla)TEM-1:JQ735917:1-861:861
NCBI	Bla|TEM-1|JQ735917|1-861|861|betalactams|Class_A_betalactamases|TEM	gi|385322919|gb|JQ735911.1|1-810
CARD	AGly|aac6-prime-Ib-cr_1_DQ303918|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	@phgb|DQ303918|0-600|ARO:3002547|AAC(6')-Ib-cr [Escherichia coli]
NCBI	AGly|aac6-prime-Ib-cr_1_DQ303918|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	gi|970698242|gb|KT988020.1|13407-12808 gi|970698093|gb|KT988018.1|11295-10696 gi|982895660|gb|KT819627.1|1-600 gi|973710347|gb|CP013833.1|68398-68997 gi|971339514|gb|CP006662.2|38111-38710 gi|966626646|gb|CP013657.1|130753-131352 gi|960865004|gb|CP012043.1|3219176-3218577 gi|948288874|gb|KR259319.1|251-850 gi|942528113|gb|KR699629.1|251-850 gi|942528090|gb|KR699626.1|251-850
Resfinder	AGly|aac6-prime-Ib-cr_1_DQ303918|Aminoglycosides|Aminoglycoside_N-acetyltransferases|AAC6-PRIME	aac(6')Ib-cr_1_DQ303918;aac(6')Ib-cr_1_DQ303918
CARD	CARD|phgb|AM408573|10027-11077|ARO:3003441|cfrA|Phenicol|Florfenicol_methyltransferases|CFRA	@phgb|AM408573|10027-11077|ARO:3003441|cfrA [Staphylococcus warneri]
NCBI	CARD|phgb|AM408573|10027-11077|ARO:3003441|cfrA|Phenicol|Florfenicol_methyltransferases|CFRA	gi|937637449|gb|KT601170.1|45139-46188 gi|930580159|gb|KP229554.1|2626-1577 gi|927776045|gb|KR005621.1|991-2040 gi|817181192|gb|KP777553.1|23400-24449 gi|768965536|gb|KM521837.1|24042-22993 gi|768965479|gb|KM521836.1|18100-19149 gi|756766642|gb|KJ922127.1|22779-21730 gi|751373065|gb|KM580533.1|8392-7343 gi|751373027|gb|KM580532.1|8392-7343 gi|696158251|gb|KJ866414.1|2007-958
Resfinder	CARD|phgb|AM408573|10027-11077|ARO:3003441|cfrA|Phenicol|Florfenicol_methyltransferases|CFRA	cfr_1_AM408573;cfr_1_AM408573;cfr_1_AM408573
CARD	26|JN645776.1|JN645776|betalactams|Penicillin_binding_protein|PBP1A	@phgb|JN645776|0-2160|ARO:3003041|PBP1a [Streptococcus pneumoniae]
NCBI	26|JN645776.1|JN645776|betalactams|Penicillin_binding_protein|PBP1A	gi|379070466|gb|JN645776.1|1-2160
CARD	gi|698174205|gb|KM087857.1|betalactams|Class_B_betalactamases|IMP	@phgb|KM087857|0-741|ARO:3002239|IMP-48 [Pseudomonas aeruginosa]
Lahey	gi|698174205|gb|KM087857.1|betalactams|Class_B_betalactamases|IMP	AIT76110.1 KM087857.1:1-741
NCBI	gi|698174205|gb|KM087857.1|betalactams|Class_B_betalactamases|IMP	gi|698174205|gb|KM087857.1|1-741
CARD	CARD|phgb|AM180355|2319373-2320111|ARO:3000375|ErmB|MLS|23S_rRNA_methyltransferases|ERM	@phgb|AM180355|2319373-2320111|ARO:3000375|ErmB [Clostridium difficile 630]
NCBI	CARD|phgb|AM180355|2319373-2320111|ARO:3000375|ErmB|MLS|23S_rRNA_methyltransferases|ERM	gi|777202877|emb|LN831030.1|2099634-2100372 gi|777202877|emb|LN831030.1|2102041-2102779 gi|760237048|gb|CP010905.1|2301615-2302353 gi|760237048|gb|CP010905.1|2304022-2304760 gi|733567460|emb|LN614756.1|2276692-2277430 gi|115249003|emb|AM180355.1|2316967-2317705 gi|115249003|emb|AM180355.1|2319374-2320112 gi|669664083|ref|NG_034211.1|5170-4432 gi|669664083|ref|NG_034211.1|7577-6839 gi|15986372|emb|AJ294530.1|1136-398 gi|745811785|gb|CP007593.1|961393-960657
CARD	gi|728797463|emb|LN515534.1|betalactams|Class_A_betalactamases|SHV	@phgb|LN515534|0-873|ARO:3003155|SHV-188 [Klebsiella pneumoniae]
Lahey	gi|728797463|emb|LN515534.1|betalactams|Class_A_betalactamases|SHV	CEA29751.1 LN515534.1:1-873
NCBI	gi|728797463|emb|LN515534.1|betalactams|Class_A_betalactamases|SHV	gi|728797463|emb|LN515534.1|1-873
NCBI	Fos|fosA_9_NZ_ACZD01000244|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	gi|499527875|emb|FO203501.1|872545-872964
Resfinder	Fos|fosA_9_NZ_ACZD01000244|Fosfomycin|Fosfomycin_thiol_transferases|FOSA	fosA_9_NZ_ACZD01000244
ARG-ANNOT	Bla|CTX-M-121|JN790862|245-1120|876|betalactams|Class_A_betalactamases|CTX	(Bla)CTX-M-121:JN790862:245-1120:876
CARD	Bla|CTX-M-121|JN790862|245-1120|876|betalactams|Class_A_betalactamases|CTX	@phgb|JN790862|244-1120|ARO:3001980|CTX-M-121 [Escherichia coli]
Lahey	Bla|CTX-M-121|JN790862|245-1120|876|betalactams|Class_A_betalactamases|CTX	AFA51699.1 JN790862.1:245-1120
NCBI	Bla|CTX-M-121|JN790862|245-1120|876|betalactams|Class_A_betalactamases|CTX	gi|512134473|gb|KF021999.1|23-898 gi|375313992|gb|JN790862.1|245-1120
Resfinder	Bla|CTX-M-121|JN790862|245-1120|876|betalactams|Class_A_betalactamases|CTX	blaCTX-M-121_1_JN790862
CARD	CARD|phgb|NC_007779|3974604-3975429|ARO:3000508|gadX|Multi-drug_resistance|MDR_regulator|GADX	@phgb|NC_007779|3974604-3975429|ARO:3000508|gadX [Escherichia coli str. K-12 substr. W3110]
NCBI	CARD|phgb|NC_007779|3974604-3975429|ARO:3000508|gadX|Multi-drug_resistance|MDR_regulator|GADX	gi|985000614|gb|CP014225.1|1863010-1862185 gi|958627747|gb|CP013253.1|4336927-4337752 gi|958612453|gb|CP013048.1|589138-589963 gi|939732440|gb|CP011343.2|3642776-3641951 gi|939731527|gb|CP011342.2|3643224-3642399 gi|937526251|gb|CP012870.1|975845-976670 gi|937521852|gb|CP012869.1|975845-976670 gi|937517453|gb|CP012868.1|975845-976670 gi|932857508|emb|LN877770.1|4489312-4488487 gi|899729770|gb|CP012127.1|3640256-3639431
NCBI	Tet|tetL_5_D00006|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	gi|695196836|ref|NG_034536.1|189-1565
Resfinder	Tet|tetL_5_D00006|Tetracyclines|Tetracycline_resistance_major_facilitator_superfamily_MFS_efflux_pumps|TETL	tet(L)_5_D00006
CARD	CARD|phgb|HG423149|39-915|ARO:3001962|CTX-M-103|betalactams|Class_A_betalactamases|CTX	@phgb|HG423149|39-915|ARO:3001962|CTX-M-103 [Escherichia coli]
NCBI	CARD|phgb|HG423149|39-915|ARO:3001962|CTX-M-103|betalactams|Class_A_betalactamases|CTX	gi|530776686|emb|HG423149.1|40-916
ARG-ANNOT	Bla|SHV-95|EF373972|1-861|861|betalactams|Class_A_betalactamases|SHV	(Bla)SHV-95:EF373972:1-861:861
CARD	Bla|SHV-95|EF373972|1-861|861|betalactams|Class_A_betalactamases|SHV	@phgb|EF373972|0-861|ARO:3001147|SHV-95 [Citrobacter freundii]
Lahey	Bla|SHV-95|EF373972|1-861|861|betalactams|Class_A_betalactamases|SHV	ABN49113.1 EF373972.1:1-861
NCBI	Bla|SHV-95|EF373972|1-861|861|betalactams|Class_A_betalactamases|SHV	gi|125658587|gb|EF373972.1|1-861
Resfinder	Bla|SHV-95|EF373972|1-861|861|betalactams|Class_A_betalactamases|SHV	blaSHV-95_1_EF373972
NCBI	Bla|OXA_60_1_AY664506|betalactams|Class_D_betalactamases|OXA	gi|240867064|gb|CP001645.1|664045-664860 gi|187727712|gb|CP001069.1|220251-221066 gi|50236434|gb|AY664506.1|1-816
Resfinder	Bla|OXA_60_1_AY664506|betalactams|Class_D_betalactamases|OXA	blaOXA-60_1_AY664506
ARG-ANNOT	Phe|FloR|AKLJ01000508|383-1597|1215|Phenicol|Phenicol_efflux_pumps|FLOR	(Phe)FloR:AKLJ01000508:383-1597:1215
NCBI	Phe|FloR|AKLJ01000508|383-1597|1215|Phenicol|Phenicol_efflux_pumps|FLOR	gi|834762786|gb|CP006641.1|6685-5471 gi|574460421|gb|KF787110.1|8717-7503 gi|571040807|gb|KC853434.1|30030-31244 gi|695221021|ref|NG_039601.1|15673-16887 gi|229561762|gb|FJ621588.1|27218-28432
CARD	gi|558607393|gb|KF513179.1|betalactams|Class_A_betalactamases|TEM	@phgb|KF513179|0-861|ARO:3001388|TEM-211 [Proteus mirabilis]
Lahey	gi|558607393|gb|KF513179.1|betalactams|Class_A_betalactamases|TEM	AHA80960.1 KF513179.1:1-861
NCBI	gi|558607393|gb|KF513179.1|betalactams|Class_A_betalactamases|TEM	gi|558607393|gb|KF513179.1|1-861
Resfinder	gi|558607393|gb|KF513179.1|betalactams|Class_A_betalactamases|TEM	blaTEM-211_1_KF513179
ARG-ANNOT	Bla|OXA-11|Z22590|155-955|801|betalactams|Class_D_betalactamases|OXA	(Bla)OXA-11:Z22590:155-955:801
CARD	Bla|OXA-11|Z22590|155-955|801|betalactams|Class_D_betalactamases|OXA	@phgb|Z22590|154-955|ARO:3001406|OXA-11 [Pseudomonas aeruginosa]
Lahey	Bla|OXA-11|Z22590|155-955|801|betalactams|Class_D_betalactamases|OXA	CAA80304.1 Z22590.1:155-955
NCBI	Bla|OXA-11|Z22590|155-955|801|betalactams|Class_D_betalactamases|OXA	gi|296549|emb|Z22590.1|155-955
Resfinder	Bla|OXA-11|Z22590|155-955|801|betalactams|Class_D_betalactamases|OXA	blaOXA-11_1_Z22590